Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:44:05 (2969012): wrapper (7.7.26015): starting
15:44:05 (2969012): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 15:44:05] Arguments: --nthreads 12
[2025-07-25 15:44:05] Threads: 12
[2025-07-25 15:44:05] Checking for CVMFS
[2025-07-25 15:44:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 15:44:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 15:44:06] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 15:44:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 15:44:07] 2.11.5.0 10785 23101 198604 148756 3 267 40320461 45568000 22390 130560 0 175887440 99.756 129586450 24891 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-07-25 15:44:07] CVMFS is ok
[2025-07-25 15:44:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 15:44:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 15:44:07] Further information can be found at the LHC@home message board.
[2025-07-25 15:44:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 15:44:07] Checking for apptainer binary...
[2025-07-25 15:44:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 15:44:07] Running /usr/bin/apptainer --version
[2025-07-25 15:44:08] apptainer version 1.4.1-1.el9
[2025-07-25 15:44:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 15:44:08] wns0034.triumf.lcg
[2025-07-25 15:44:08] apptainer works
[2025-07-25 15:44:08] Set ATHENA_PROC_NUMBER=12
[2025-07-25 15:44:08] Set ATHENA_CORE_NUMBER=12
[2025-07-25 15:44:09] Starting ATLAS job with PandaID=6745060915
[2025-07-25 15:44:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 15:49:13]  *** The last 200 lines of the pilot log: ***
[2025-07-25 15:49:13] 2025-07-25 22:48:40,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | WARNING  | wrong length of table data, x=[1753483559.0], y=[26886.0] (must be same and length>=4)
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | could have reported an average CPU frequency of 2622 MHz (4 samples)
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | ..............................
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . Timing measurements:
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . get job = 0 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . initial setup = 4 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . payload setup = 18 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . stage-in = 0 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | . payload execution = 41 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | . stage-out = 1 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | . log creation = 0 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | ..............................
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745060915/pilotlog.txt
[2025-07-25 15:49:13] 2025-07-25 22:48:40,544 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 15:49:13] - Log from pilotlog.txt -
[2025-07-25 15:49:13] 2025-07-25 22:48:40,528 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745060915/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 15:49:13] 2025-07-25 22:48:40,528 | INFO     | extracted standard info from prmon json
[2025-07-25 15:49:13] 2025-07-25 22:48:40,528 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 15:49:13] 2025-07-25 22:48:40,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | WARNING  | wrong length of table data, x=[1753483559.0], y=[26886.0] (must be same and length>=4)
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | could have reported an average CPU frequency of 2622 MHz (4 samples)
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | ..............................
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . Timing measurements:
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . get job = 0 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . initial setup = 4 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . payload setup = 18 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . stage-in = 0 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | . payload execution = 41 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | . stage-out = 1 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | . log creation = 0 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | ..............................
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745060915/pilotlog.txt
[2025-07-25 15:49:13] 2025-07-25 22:48:40,545 | WARNING  | 
[2025-07-25 15:49:13] [begin log extracts]
[2025-07-25 15:49:13] - Log from pilotlog.txt -
[2025-07-25 15:49:13] 2025-07-25 22:48:40,528 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745060915/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 15:49:13] 2025-07-25 22:48:40,528 | INFO     | extracted standard info from prmon json
[2025-07-25 15:49:13] 2025-07-25 22:48:40,528 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 15:49:13] 2025-07-25 22:48:40,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | WARNING  | wrong length of table data, x=[1753483559.0], y=[26886.0] (must be same and length>=4)
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | could have reported an average CPU frequency of 2622 MHz (4 samples)
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | ..............................
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . Timing measurements:
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . get job = 0 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . initial setup = 4 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . payload setup = 18 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,529 | INFO     | . stage-in = 0 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | . payload execution = 41 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | . stage-out = 1 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | . log creation = 0 s
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | ..............................
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 15:49:13] 2025-07-25 22:48:40,530 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745060915/pilotlog.txt
[2025-07-25 15:49:13] [end log extracts]
[2025-07-25 15:49:13] 2025-07-25 22:48:40,545 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 15:49:13] 2025-07-25 22:48:40,546 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 15:49:13] 2025-07-25 22:48:41,082 | INFO     | 
[2025-07-25 15:49:13] 2025-07-25 22:48:41,082 | INFO     | job summary report
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | --------------------------------------------------
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | PanDA job id: 6745060915
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | task id: 45743349
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 15:46:14,596 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | pilot state: failed 
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | transexitcode: 65
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | exeerrorcode: 65
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | exitcode: 65
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | cpuconsumptiontime: 17 s
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | nevents: 0
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | neventsw: 0
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | pid: 2978991
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | pgrp: 2978991
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | corecount: 12
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | event service: False
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | sizes: {0: 2396647, 1: 2397329, 2: 2397528, 13: 2397528, 19: 2397846, 24: 2397874, 63: 2421405, 64: 2421381, 67: 2425729, 69: 2425757, 201: 2425923}
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | --------------------------------------------------
[2025-07-25 15:49:13] 2025-07-25 22:48:41,083 | INFO     | 
[2025-07-25 15:49:13] 2025-07-25 22:48:41,084 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 15:49:13] 2025-07-25 22:48:41,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,140 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 15:49:13] 2025-07-25 22:48:41,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,140 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 15:49:13] 2025-07-25 22:48:41,140 | INFO     | job 6745060915 has completed (purged errors)
[2025-07-25 15:49:13] 2025-07-25 22:48:41,140 | INFO     | overall cleanup function is called
[2025-07-25 15:49:13] 2025-07-25 22:48:42,146 | INFO     | --- collectZombieJob: --- 10, [2978991]
[2025-07-25 15:49:13] 2025-07-25 22:48:42,146 | INFO     | zombie collector waiting for pid 2978991
[2025-07-25 15:49:13] 2025-07-25 22:48:42,147 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 15:49:13] 2025-07-25 22:48:42,147 | INFO     | collected zombie processes
[2025-07-25 15:49:13] 2025-07-25 22:48:42,147 | INFO     | will attempt to kill all subprocesses of pid=2978991
[2025-07-25 15:49:13] 2025-07-25 22:48:42,571 | INFO     | process IDs to be killed: [2978991] (in reverse order)
[2025-07-25 15:49:13] 2025-07-25 22:48:42,654 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 15:49:13] 2025-07-25 22:48:42,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 15:49:13] 2025-07-25 22:48:42,673 | INFO     | did not find any defunct processes belonging to 2978991
[2025-07-25 15:49:13] 2025-07-25 22:48:42,682 | INFO     | did not find any defunct processes belonging to 2978991
[2025-07-25 15:49:13] 2025-07-25 22:48:42,682 | INFO     | ready for new job
[2025-07-25 15:49:13] 2025-07-25 22:48:42,682 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 15:49:13] 2025-07-25 22:48:42,684 | INFO     | ***************************************
[2025-07-25 15:49:13] 2025-07-25 22:48:42,684 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 15:49:13] 2025-07-25 22:48:42,684 | INFO     | ***************************************
[2025-07-25 15:49:13] 2025-07-25 22:48:42,684 | INFO     | 
[2025-07-25 15:49:13] 2025-07-25 22:48:42,686 | INFO     | architecture information:
[2025-07-25 15:49:13] 2025-07-25 22:48:42,686 | INFO     | executing command: cat /etc/os-release
[2025-07-25 15:49:13] 2025-07-25 22:48:42,699 | INFO     | cat /etc/os-release:
[2025-07-25 15:49:13] NAME="CentOS Linux"
[2025-07-25 15:49:13] VERSION="7 (Core)"
[2025-07-25 15:49:13] ID="centos"
[2025-07-25 15:49:13] ID_LIKE="rhel fedora"
[2025-07-25 15:49:13] VERSION_ID="7"
[2025-07-25 15:49:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 15:49:13] ANSI_COLOR="0;31"
[2025-07-25 15:49:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 15:49:13] HOME_URL="https://www.centos.org/"
[2025-07-25 15:49:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 15:49:13] 
[2025-07-25 15:49:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 15:49:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 15:49:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 15:49:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 15:49:13] 
[2025-07-25 15:49:13] 2025-07-25 22:48:42,699 | INFO     | ***************************************
[2025-07-25 15:49:13] 2025-07-25 22:48:43,204 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 15:49:13] 2025-07-25 22:48:43,230 | INFO     | sufficient remaining disk space (1804481855488 B)
[2025-07-25 15:49:13] 2025-07-25 22:48:43,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 15:49:13] 2025-07-25 22:48:43,230 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 15:49:13] 2025-07-25 22:48:43,230 | INFO     | update_server=False
[2025-07-25 15:49:13] 2025-07-25 22:48:43,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 15:49:13] 2025-07-25 22:48:43,231 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 15:49:13] 2025-07-25 22:48:43,375 | INFO     | all payload control threads have been joined
[2025-07-25 15:49:13] 2025-07-25 22:48:43,497 | INFO     | all job control threads have been joined
[2025-07-25 15:49:13] 2025-07-25 22:48:43,609 | INFO     | all data control threads have been joined
[2025-07-25 15:49:13] 2025-07-25 22:48:43,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 15:49:13] 2025-07-25 22:48:43,921 | INFO     | aborting loop
[2025-07-25 15:49:13] 2025-07-25 22:48:44,236 | INFO     | [job] retrieve thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:44,317 | INFO     | [job] validate thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:44,384 | INFO     | [payload] control thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:44,506 | INFO     | [job] control thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:44,615 | INFO     | [payload] failed_post thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:44,616 | INFO     | [data] control thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:44,647 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:44,885 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:44,932 | INFO     | [job] job monitor thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:45,243 | INFO     | [data] copytool_out thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:45,341 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:45,342 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:45,424 | INFO     | [data] copytool_in thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:45,740 | INFO     | [payload] validate_post thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:45,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 15:49:13] 2025-07-25 22:48:45,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 15:49:13] 2025-07-25 22:48:46,771 | INFO     | [job] queue monitor thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:49,815 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 15:49:13] 2025-07-25 22:48:51,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459103131456)>', '<ExcThread(monitor, started 140458558736128)>']
[2025-07-25 15:49:13] 2025-07-25 22:48:56,710 | INFO     | all workflow threads have been joined
[2025-07-25 15:49:13] 2025-07-25 22:48:56,710 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 15:49:13] 2025-07-25 22:48:56,711 | INFO     | traces error code: 0
[2025-07-25 15:49:13] 2025-07-25 22:48:56,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 15:49:13] 2025-07-25 22:49:13,107 | INFO     | PID=2972590 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 15:49:13] 2025-07-25 22:49:13,108 | INFO     | .. there are 42 such processes running
[2025-07-25 15:49:13] 2025-07-25 22:49:13,108 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 15:49:13] 2025-07-25 22:49:13,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 15:49:13] 2025-07-25 22:49:13,108 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 15:49:13] 2025-07-25 22:49:13,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 15:49:13] 2025-07-25 22:49:13,108 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 15:49:13] 2025-07-25 22:49:13,109 | INFO     | [monitor] control thread has ended
[2025-07-25 15:49:13] 2025-07-25 22:49:13,316 [wrapper] ==== pilot stdout END ====
[2025-07-25 15:49:13] 2025-07-25 22:49:13,341 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 15:49:13] 2025-07-25 22:49:13,368 [wrapper] pilotpid: 2972590
[2025-07-25 15:49:13] 2025-07-25 22:49:13,393 [wrapper] Pilot exit status: 0
[2025-07-25 15:49:13] 2025-07-25 22:49:13,496 [wrapper] pandaids: 6745060915
[2025-07-25 15:49:13] 2025-07-25 22:49:13,616 [wrapper] cleanup supervisor_pilot 2972596 2972591
[2025-07-25 15:49:13] 2025-07-25 22:49:13,618 [wrapper] Test setup, not cleaning
[2025-07-25 15:49:13] 2025-07-25 22:49:13,620 [wrapper] apfmon messages muted
[2025-07-25 15:49:13] 2025-07-25 22:49:13,623 [wrapper] ==== wrapper stdout END ====
[2025-07-25 15:49:13] 2025-07-25 22:49:13,624 [wrapper] ==== wrapper stderr END ====
[2025-07-25 15:49:13]  *** Error codes and diagnostics ***
[2025-07-25 15:49:13]     "exeErrorCode": 65,
[2025-07-25 15:49:13]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 15:49:13]     "pilotErrorCode": 1305,
[2025-07-25 15:49:13]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 15:49:13]  *** Listing of results directory ***
[2025-07-25 15:49:13] total 232016
[2025-07-25 15:49:13] -rw-r--r--. 1 boinc boinc    530466 Jul 25 12:17 pilot3.tar.gz
[2025-07-25 15:49:13] -rw-r--r--. 1 boinc boinc      5112 Jul 25 12:34 queuedata.json
[2025-07-25 15:49:13] -rwx------. 1 boinc boinc     36292 Jul 25 12:34 runpilot2-wrapper.sh
[2025-07-25 15:49:13] -rw-r--r--. 1 boinc boinc       100 Jul 25 15:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 15:49:13] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 15:44 run_atlas
[2025-07-25 15:49:13] -rw-r--r--. 1 boinc boinc       105 Jul 25 15:44 job.xml
[2025-07-25 15:49:13] -rw-r--r--. 1 boinc boinc      6596 Jul 25 15:44 init_data.xml
[2025-07-25 15:49:13] -rw-r--r--. 2 boinc boinc 233502663 Jul 25 15:44 EVNT.45743347._001458.pool.root.1
[2025-07-25 15:49:13] -rw-r--r--. 2 boinc boinc     15095 Jul 25 15:44 start_atlas.sh
[2025-07-25 15:49:13] drwxrwx--x. 2 boinc boinc      4096 Jul 25 15:44 shared
[2025-07-25 15:49:13] -rw-r--r--. 2 boinc boinc    542893 Jul 25 15:44 input.tar.gz
[2025-07-25 15:49:13] -rw-r--r--. 1 boinc boinc         0 Jul 25 15:44 boinc_lockfile
[2025-07-25 15:49:13] -rw-r--r--. 1 boinc boinc      2563 Jul 25 15:44 pandaJob.out
[2025-07-25 15:49:13] -rw-------. 1 boinc boinc    980001 Jul 25 15:44 agis_schedconf.cvmfs.json
[2025-07-25 15:49:13] -rw-------. 1 boinc boinc   1593052 Jul 25 15:44 agis_ddmendpoints.agis.ALL.json
[2025-07-25 15:49:13] drwx------. 4 boinc boinc      4096 Jul 25 15:44 pilot3
[2025-07-25 15:49:13] -rw-------. 1 boinc boinc       977 Jul 25 15:46 memory_monitor_summary.json
[2025-07-25 15:49:13] -rw-------. 1 boinc boinc     21258 Jul 25 15:46 log.45743349._026097.job.log.tgz.1
[2025-07-25 15:49:13] -rw-------. 1 boinc boinc        95 Jul 25 15:48 pilot_heartbeat.json
[2025-07-25 15:49:13] -rw-------. 1 boinc boinc      8392 Jul 25 15:48 heartbeat.json
[2025-07-25 15:49:13] -rw-r--r--. 1 boinc boinc       523 Jul 25 15:49 boinc_task_state.xml
[2025-07-25 15:49:13] -rw-r--r--. 1 boinc boinc      8192 Jul 25 15:49 boinc_mmap_file
[2025-07-25 15:49:13] -rw-r--r--. 1 boinc boinc        22 Jul 25 15:49 wrapper_checkpoint.txt
[2025-07-25 15:49:13] -rw-------. 1 boinc boinc       893 Jul 25 15:49 pilotlog.txt
[2025-07-25 15:49:13] -rw-------. 1 boinc boinc     80724 Jul 25 15:49 log.45743349._026097.job.log.1
[2025-07-25 15:49:13] -rw-------. 1 boinc boinc       188 Jul 25 15:49 output.list
[2025-07-25 15:49:13] -rw-r--r--. 1 boinc boinc       620 Jul 25 15:49 runtime_log
[2025-07-25 15:49:13] -rw-------. 1 boinc boinc    122880 Jul 25 15:49 result.tar.gz
[2025-07-25 15:49:13] -rw-------. 1 boinc boinc       644 Jul 25 15:49 u14KDm4Mdz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpVzKDmpMLGXm.diag
[2025-07-25 15:49:13] -rw-r--r--. 1 boinc boinc      8485 Jul 25 15:49 runtime_log.err
[2025-07-25 15:49:13] -rw-r--r--. 1 boinc boinc     21830 Jul 25 15:49 stderr.txt
[2025-07-25 15:49:14] No HITS result produced
[2025-07-25 15:49:14]  *** Contents of shared directory: ***
[2025-07-25 15:49:14] total 228704
[2025-07-25 15:49:14] -rw-r--r--. 2 boinc boinc 233502663 Jul 25 15:44 ATLAS.root_0
[2025-07-25 15:49:14] -rw-r--r--. 2 boinc boinc     15095 Jul 25 15:44 start_atlas.sh
[2025-07-25 15:49:14] -rw-r--r--. 2 boinc boinc    542893 Jul 25 15:44 input.tar.gz
[2025-07-25 15:49:14] -rw-------. 1 boinc boinc    122880 Jul 25 15:49 result.tar.gz
15:49:15 (2969012): run_atlas exited; CPU time 26.635790
15:49:15 (2969012): called boinc_finish(0)

</stderr_txt>
]]>

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