Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:03:14 (614521): wrapper (7.7.26015): starting
18:03:14 (614521): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 18:03:14] Arguments: --nthreads 8
[2025-07-25 18:03:14] Threads: 8
[2025-07-25 18:03:14] Checking for CVMFS
[2025-07-25 18:03:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 18:03:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 18:03:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 18:03:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 18:03:15] 2.13.1.0 4905 176 91816 148754 3 188 1764756 40960000 5565 16776704 0 1378230 99.997 8236 46531 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 18:03:15] CVMFS is ok
[2025-07-25 18:03:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 18:03:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 18:03:15] Further information can be found at the LHC@home message board.
[2025-07-25 18:03:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 18:03:15] Checking for apptainer binary...
[2025-07-25 18:03:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 18:03:15] Running /usr/bin/apptainer --version
[2025-07-25 18:03:15] apptainer version 1.4.1-1.el9
[2025-07-25 18:03:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 18:03:15] c-206-35.aglt2.org
[2025-07-25 18:03:15] apptainer works
[2025-07-25 18:03:15] Set ATHENA_PROC_NUMBER=8
[2025-07-25 18:03:15] Set ATHENA_CORE_NUMBER=8
[2025-07-25 18:03:15] Starting ATLAS job with PandaID=6744951973
[2025-07-25 18:03:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 19:27:42]  *** The last 200 lines of the pilot log: ***
[2025-07-25 19:27:42]  is_tar=False
[2025-07-25 19:27:42]  lfn=log.45743349._016189.job.log.tgz.1
[2025-07-25 19:27:42]  mtime=0
[2025-07-25 19:27:42]  protocol_id=None
[2025-07-25 19:27:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 19:27:42]  replicas=None
[2025-07-25 19:27:42]  scope=mc23_13p6TeV
[2025-07-25 19:27:42]  status=None
[2025-07-25 19:27:42]  status_code=0
[2025-07-25 19:27:42]  storage_token=
[2025-07-25 19:27:42]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6744951973/log.45743349._016189.job.log.tgz.1
[2025-07-25 19:27:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/09/log.45743349._016189.job.log.tgz.1
[2025-07-25 19:27:42]  workdir=None
[2025-07-25 19:27:42] ]
[2025-07-25 19:27:42] 2025-07-25 23:27:01,732 | INFO     | transferring file log.45743349._016189.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6744951973/log.45743349._016189.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 19:27:42] 2025-07-25 23:27:01,732 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6744951973/log.45743349._016189.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._016189.job
[2025-07-25 19:27:42] 2025-07-25 23:27:01,747 | INFO     | adding to output.list: log.45743349._016189.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/09/log.45743349._016189.job.log.tg
[2025-07-25 19:27:42] 2025-07-25 23:27:01,747 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 19:27:42] 2025-07-25 23:27:01,747 | INFO     | summary of transferred files:
[2025-07-25 19:27:42] 2025-07-25 23:27:01,747 | INFO     |  -- lfn=log.45743349._016189.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 19:27:42] 2025-07-25 23:27:01,747 | INFO     | stage-out finished correctly
[2025-07-25 19:27:42] 2025-07-25 23:27:02,482 | INFO     | monitor loop #362: job 0:6744951973 is in state 'finished'
[2025-07-25 19:27:42] 2025-07-25 23:27:02,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 19:27:42] 2025-07-25 23:27:03,574 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 19:27:42] 2025-07-25 23:27:04,985 | INFO     | monitor loop #363: job 0:6744951973 is in state 'finished'
[2025-07-25 19:27:42] 2025-07-25 23:27:04,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 19:27:42] 2025-07-25 23:27:06,417 | INFO     | job 6744951973 has state=finished
[2025-07-25 19:27:42] 2025-07-25 23:27:06,417 | INFO     | preparing for final server update for job 6744951973 in state='finished'
[2025-07-25 19:27:42] 2025-07-25 23:27:06,418 | INFO     | this job has now completed (state=finished)
[2025-07-25 19:27:42] 2025-07-25 23:27:06,418 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 19:27:42] 2025-07-25 23:27:06,418 | INFO     | log transfer has been attempted: DONE
[2025-07-25 19:27:42] 2025-07-25 23:27:06,418 | INFO     | job 6744951973 has finished - writing final server update
[2025-07-25 19:27:42] 2025-07-25 23:27:06,418 | INFO     | total number of processed events: 400 (read)
[2025-07-25 19:27:42] 2025-07-25 23:27:06,419 | INFO     | executing command: lscpu
[2025-07-25 19:27:42] 2025-07-25 23:27:06,460 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 19:27:42] 2025-07-25 23:27:07,488 | INFO     | monitor loop #364: job 0:6744951973 is in state 'finished'
[2025-07-25 19:27:42] 2025-07-25 23:27:07,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 19:27:42] 2025-07-25 23:27:09,070 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 19:27:42] 2025-07-25 23:27:09,075 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3164.219125000002
[2025-07-25 19:27:42] 2025-07-25 23:27:09,084 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6744951973/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 19:27:42] 2025-07-25 23:27:09,084 | INFO     | extracted standard info from prmon json
[2025-07-25 19:27:42] 2025-07-25 23:27:09,084 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 19:27:42] 2025-07-25 23:27:09,085 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 19:27:42] 2025-07-25 23:27:09,085 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 19:27:42] 2025-07-25 23:27:09,085 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 19:27:42] 2025-07-25 23:27:09,086 | INFO     | fitting pss+swap vs Time
[2025-07-25 19:27:42] 2025-07-25 23:27:09,086 | INFO     | sum of square deviations: 130793150.0
[2025-07-25 19:27:42] 2025-07-25 23:27:09,086 | INFO     | sum of deviations: 1107918112.0000002
[2025-07-25 19:27:42] 2025-07-25 23:27:09,086 | INFO     | mean x: 1753483588.0
[2025-07-25 19:27:42] 2025-07-25 23:27:09,086 | INFO     | mean y: 2507489.0933333333
[2025-07-25 19:27:42] 2025-07-25 23:27:09,086 | INFO     | -- intersect: -14850840918.219635
[2025-07-25 19:27:42] 2025-07-25 23:27:09,086 | INFO     | intersect: -14850840918.219635
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | chi2: 0.0007925151534628099
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | -- intersect: -14850840918.219635
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | current memory leak: 8.47 B/s (using 75 data points, chi2=0.00)
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | could have reported an average CPU frequency of 3192 MHz (6 samples)
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | ..............................
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | . Timing measurements:
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | . get job = 0 s
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | . initial setup = 2 s
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | . payload setup = 4 s
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | . stage-in = 0 s
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | . payload execution = 4994 s
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | . stage-out = 0 s
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | . log creation = 0 s
[2025-07-25 19:27:42] 2025-07-25 23:27:09,087 | INFO     | ..............................
[2025-07-25 19:27:42] 2025-07-25 23:27:09,144 | INFO     | 
[2025-07-25 19:27:42] 2025-07-25 23:27:09,144 | INFO     | job summary report
[2025-07-25 19:27:42] 2025-07-25 23:27:09,144 | INFO     | --------------------------------------------------
[2025-07-25 19:27:42] 2025-07-25 23:27:09,144 | INFO     | PanDA job id: 6744951973
[2025-07-25 19:27:42] 2025-07-25 23:27:09,144 | INFO     | task id: 45743349
[2025-07-25 19:27:42] 2025-07-25 23:27:09,144 | INFO     | errors: (none)
[2025-07-25 19:27:42] 2025-07-25 23:27:09,144 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 19:27:42] 2025-07-25 23:27:09,144 | INFO     | pilot state: finished 
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | transexitcode: 0
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | exeerrorcode: 0
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | exeerrordiag: 
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | exitcode: 0
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | exitmsg: OK
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | cpuconsumptiontime: 37580 s
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | nevents: 400
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | neventsw: 0
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | pid: 630778
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | pgrp: 630778
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | corecount: 8
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | event service: False
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | sizes: {0: 2397300, 1: 2397499, 4: 2397761, 11: 2397789, 5003: 2424175, 5004: 2424174, 5005: 2433356, 5007: 2433412, 5012: 2433606}
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | --------------------------------------------------
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | 
[2025-07-25 19:27:42] 2025-07-25 23:27:09,145 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,160 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,161 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 19:27:42] 2025-07-25 23:27:09,161 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,161 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 19:27:42] 2025-07-25 23:27:09,161 | INFO     | job 6744951973 has completed (purged errors)
[2025-07-25 19:27:42] 2025-07-25 23:27:09,161 | INFO     | overall cleanup function is called
[2025-07-25 19:27:42] 2025-07-25 23:27:10,168 | INFO     | --- collectZombieJob: --- 10, [630778]
[2025-07-25 19:27:42] 2025-07-25 23:27:10,168 | INFO     | zombie collector waiting for pid 630778
[2025-07-25 19:27:42] 2025-07-25 23:27:10,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 19:27:42] 2025-07-25 23:27:10,169 | INFO     | collected zombie processes
[2025-07-25 19:27:42] 2025-07-25 23:27:10,169 | INFO     | will attempt to kill all subprocesses of pid=630778
[2025-07-25 19:27:42] 2025-07-25 23:27:10,333 | INFO     | process IDs to be killed: [630778] (in reverse order)
[2025-07-25 19:27:42] 2025-07-25 23:27:10,399 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 19:27:42] 2025-07-25 23:27:10,399 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 19:27:42] 2025-07-25 23:27:10,406 | INFO     | did not find any defunct processes belonging to 630778
[2025-07-25 19:27:42] 2025-07-25 23:27:10,411 | INFO     | did not find any defunct processes belonging to 630778
[2025-07-25 19:27:42] 2025-07-25 23:27:10,411 | INFO     | ready for new job
[2025-07-25 19:27:42] 2025-07-25 23:27:10,411 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 19:27:42] 2025-07-25 23:27:10,412 | INFO     | ***************************************
[2025-07-25 19:27:42] 2025-07-25 23:27:10,413 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 19:27:42] 2025-07-25 23:27:10,413 | INFO     | ***************************************
[2025-07-25 19:27:42] 2025-07-25 23:27:10,413 | INFO     | 
[2025-07-25 19:27:42] 2025-07-25 23:27:10,415 | INFO     | architecture information:
[2025-07-25 19:27:42] 2025-07-25 23:27:10,416 | INFO     | executing command: cat /etc/os-release
[2025-07-25 19:27:42] 2025-07-25 23:27:10,427 | INFO     | cat /etc/os-release:
[2025-07-25 19:27:42] NAME="CentOS Linux"
[2025-07-25 19:27:42] VERSION="7 (Core)"
[2025-07-25 19:27:42] ID="centos"
[2025-07-25 19:27:42] ID_LIKE="rhel fedora"
[2025-07-25 19:27:42] VERSION_ID="7"
[2025-07-25 19:27:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 19:27:42] ANSI_COLOR="0;31"
[2025-07-25 19:27:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 19:27:42] HOME_URL="https://www.centos.org/"
[2025-07-25 19:27:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 19:27:42] 
[2025-07-25 19:27:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 19:27:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 19:27:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 19:27:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 19:27:42] 
[2025-07-25 19:27:42] 2025-07-25 23:27:10,427 | INFO     | ***************************************
[2025-07-25 19:27:42] 2025-07-25 23:27:10,930 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-25 19:27:42] 2025-07-25 23:27:10,947 | INFO     | sufficient remaining disk space (82643517440 B)
[2025-07-25 19:27:42] 2025-07-25 23:27:10,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 19:27:42] 2025-07-25 23:27:10,947 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 19:27:42] 2025-07-25 23:27:10,947 | INFO     | update_server=False
[2025-07-25 19:27:42] 2025-07-25 23:27:10,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 19:27:42] 2025-07-25 23:27:10,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 19:27:42] 2025-07-25 23:27:10,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 19:27:42] 2025-07-25 23:27:10,993 | INFO     | aborting loop
[2025-07-25 19:27:42] 2025-07-25 23:27:11,222 | INFO     | all payload control threads have been joined
[2025-07-25 19:27:42] 2025-07-25 23:27:11,423 | INFO     | all data control threads have been joined
[2025-07-25 19:27:42] 2025-07-25 23:27:11,952 | INFO     | all job control threads have been joined
[2025-07-25 19:27:42] 2025-07-25 23:27:11,953 | INFO     | [job] retrieve thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:11,953 | INFO     | [job] queue monitor thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:11,996 | INFO     | [job] job monitor thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:12,000 | INFO     | [payload] failed_post thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:12,228 | INFO     | [payload] control thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:12,274 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:12,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 19:27:42] 2025-07-25 23:27:12,428 | INFO     | [data] control thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:12,762 | INFO     | [job] validate thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:12,816 | INFO     | [payload] validate_post thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:12,957 | INFO     | [job] control thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:12,982 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:13,200 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:13,258 | INFO     | [data] copytool_in thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:13,294 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:14,146 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 19:27:42] 2025-07-25 23:27:14,323 | INFO     | [data] copytool_out thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:18,152 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 19:27:42] 2025-07-25 23:27:18,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139853221771072)>', '<ExcThread(monitor, started 139852456654592)>']
[2025-07-25 19:27:42] 2025-07-25 23:27:23,680 | INFO     | all workflow threads have been joined
[2025-07-25 19:27:42] 2025-07-25 23:27:23,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 19:27:42] 2025-07-25 23:27:23,681 | INFO     | traces error code: 0
[2025-07-25 19:27:42] 2025-07-25 23:27:23,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 19:27:42] 2025-07-25 23:27:42,082 | INFO     | PID=624315 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-25 19:27:42] 2025-07-25 23:27:42,082 | INFO     | .. there are 6 such processes running
[2025-07-25 19:27:42] 2025-07-25 23:27:42,082 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 19:27:42] 2025-07-25 23:27:42,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 19:27:42] 2025-07-25 23:27:42,082 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 19:27:42] 2025-07-25 23:27:42,082 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 19:27:42] 2025-07-25 23:27:42,083 | INFO     | [monitor] control thread has ended
[2025-07-25 19:27:42] 2025-07-25 23:27:42,187 [wrapper] ==== pilot stdout END ====
[2025-07-25 19:27:42] 2025-07-25 23:27:42,189 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 19:27:42] 2025-07-25 23:27:42,191 [wrapper] pilotpid: 624315
[2025-07-25 19:27:42] 2025-07-25 23:27:42,193 [wrapper] Pilot exit status: 0
[2025-07-25 19:27:42] 2025-07-25 23:27:42,200 [wrapper] pandaids: 6744951973
[2025-07-25 19:27:42] 2025-07-25 23:27:42,241 [wrapper] cleanup supervisor_pilot  714727 624316
[2025-07-25 19:27:42] 2025-07-25 23:27:42,243 [wrapper] Test setup, not cleaning
[2025-07-25 19:27:42] 2025-07-25 23:27:42,245 [wrapper] apfmon messages muted
[2025-07-25 19:27:42] 2025-07-25 23:27:42,247 [wrapper] ==== wrapper stdout END ====
[2025-07-25 19:27:42] 2025-07-25 23:27:42,249 [wrapper] ==== wrapper stderr END ====
[2025-07-25 19:27:42]  *** Error codes and diagnostics ***
[2025-07-25 19:27:42]     "exeErrorCode": 0,
[2025-07-25 19:27:42]     "exeErrorDiag": "",
[2025-07-25 19:27:42]     "pilotErrorCode": 0,
[2025-07-25 19:27:42]     "pilotErrorDiag": "",
[2025-07-25 19:27:42]  *** Listing of results directory ***
[2025-07-25 19:27:42] total 349188
[2025-07-25 19:27:42] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 00:28 pilot3.tar.gz
[2025-07-25 19:27:42] -rwx------. 1 boincer umatlas     36292 Jul 25 00:42 runpilot2-wrapper.sh
[2025-07-25 19:27:42] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 00:42 queuedata.json
[2025-07-25 19:27:42] -rw-r--r--. 1 boincer umatlas       100 Jul 25 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 19:27:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 18:03 run_atlas
[2025-07-25 19:27:42] -rw-r--r--. 1 boincer umatlas       105 Jul 25 18:03 job.xml
[2025-07-25 19:27:42] -rw-r--r--. 2 boincer umatlas 143605598 Jul 25 18:03 EVNT.45743347._000907.pool.root.1
[2025-07-25 19:27:42] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 18:03 start_atlas.sh
[2025-07-25 19:27:42] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 18:03 shared
[2025-07-25 19:27:42] -rw-r--r--. 2 boincer umatlas    542889 Jul 25 18:03 input.tar.gz
[2025-07-25 19:27:42] -rw-r--r--. 1 boincer umatlas         0 Jul 25 18:03 boinc_lockfile
[2025-07-25 19:27:42] -rw-r--r--. 1 boincer umatlas      2561 Jul 25 18:03 pandaJob.out
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas    980001 Jul 25 18:03 agis_schedconf.cvmfs.json
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas   1593052 Jul 25 18:03 agis_ddmendpoints.agis.ALL.json
[2025-07-25 19:27:42] drwx------. 4 boincer umatlas      4096 Jul 25 18:03 pilot3
[2025-07-25 19:27:42] -rw-r--r--. 1 boincer umatlas      6897 Jul 25 19:22 init_data.xml
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas 208538025 Jul 25 19:26 HITS.45743349._016189.pool.root.1
[2025-07-25 19:27:42] -rw-r--r--. 1 boincer umatlas       529 Jul 25 19:26 boinc_task_state.xml
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas      1023 Jul 25 19:26 memory_monitor_summary.json
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas    292863 Jul 25 19:27 log.45743349._016189.job.log.tgz.1
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas      7757 Jul 25 19:27 heartbeat.json
[2025-07-25 19:27:42] -rw-r--r--. 1 boincer umatlas        27 Jul 25 19:27 wrapper_checkpoint.txt
[2025-07-25 19:27:42] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 19:27 boinc_mmap_file
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas       821 Jul 25 19:27 pilotlog.txt
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas        95 Jul 25 19:27 pilot_heartbeat.json
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas    482834 Jul 25 19:27 log.45743349._016189.job.log.1
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas       357 Jul 25 19:27 output.list
[2025-07-25 19:27:42] -rw-r--r--. 1 boincer umatlas       620 Jul 25 19:27 runtime_log
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas    798720 Jul 25 19:27 result.tar.gz
[2025-07-25 19:27:42] -rw-r--r--. 1 boincer umatlas      8660 Jul 25 19:27 runtime_log.err
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas       651 Jul 25 19:27 pDxNDmKRPz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0TyKDm4HwKWn.diag
[2025-07-25 19:27:42] -rw-r--r--. 1 boincer umatlas     21608 Jul 25 19:27 stderr.txt
[2025-07-25 19:27:42] HITS file was successfully produced:
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas 208538025 Jul 25 19:26 shared/HITS.pool.root.1
[2025-07-25 19:27:42]  *** Contents of shared directory: ***
[2025-07-25 19:27:42] total 345224
[2025-07-25 19:27:42] -rw-r--r--. 2 boincer umatlas 143605598 Jul 25 18:03 ATLAS.root_0
[2025-07-25 19:27:42] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 18:03 start_atlas.sh
[2025-07-25 19:27:42] -rw-r--r--. 2 boincer umatlas    542889 Jul 25 18:03 input.tar.gz
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas 208538025 Jul 25 19:26 HITS.pool.root.1
[2025-07-25 19:27:42] -rw-------. 1 boincer umatlas    798720 Jul 25 19:27 result.tar.gz
19:27:43 (614521): run_atlas exited; CPU time 37657.818189
19:27:43 (614521): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN