Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:56:48 (1501606): wrapper (7.7.26015): starting
14:56:48 (1501606): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 14:56:48] Arguments: --nthreads 12
[2025-07-25 14:56:48] Threads: 12
[2025-07-25 14:56:48] Checking for CVMFS
[2025-07-25 14:56:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 14:56:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 14:56:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 14:56:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 14:56:50] 2.11.5.0 7125 34831 293016 148754 1 353 37574045 45568000 17679 130560 0 275185383 99.751 211751348 28957 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-25 14:56:50] CVMFS is ok
[2025-07-25 14:56:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 14:56:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 14:56:51] Further information can be found at the LHC@home message board.
[2025-07-25 14:56:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 14:56:51] Checking for apptainer binary...
[2025-07-25 14:56:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 14:56:51] Running /usr/bin/apptainer --version
[2025-07-25 14:56:51] apptainer version 1.4.1-1.el9
[2025-07-25 14:56:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 14:56:52] wns0032.triumf.lcg
[2025-07-25 14:56:52] apptainer works
[2025-07-25 14:56:52] Set ATHENA_PROC_NUMBER=12
[2025-07-25 14:56:52] Set ATHENA_CORE_NUMBER=12
[2025-07-25 14:56:52] Starting ATLAS job with PandaID=6745060644
[2025-07-25 14:56:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 15:03:27]  *** The last 200 lines of the pilot log: ***
[2025-07-25 15:03:27] 2025-07-25 22:02:52,604 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 15:03:27] 2025-07-25 22:02:52,605 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 15:03:27] 2025-07-25 22:02:52,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 15:03:27] 2025-07-25 22:02:52,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | WARNING  | wrong length of table data, x=[1753480762.0, 1753480823.0], y=[1620.0, 466586.0] (must be same and length>=4)
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | could have reported an average CPU frequency of 2504 MHz (4 samples)
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | ..............................
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . Timing measurements:
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . get job = 0 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . initial setup = 3 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . payload setup = 31 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . stage-in = 0 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . payload execution = 80 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . stage-out = 1 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . log creation = 0 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | ..............................
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 15:03:27] 2025-07-25 22:02:52,611 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745060644/pilotlog.txt
[2025-07-25 15:03:27] 2025-07-25 22:02:52,727 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 15:03:27] - Log from pilotlog.txt -
[2025-07-25 15:03:27] 2025-07-25 22:02:52,604 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745060644/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 15:03:27] 2025-07-25 22:02:52,604 | INFO     | extracted standard info from prmon json
[2025-07-25 15:03:27] 2025-07-25 22:02:52,604 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 15:03:27] 2025-07-25 22:02:52,605 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 15:03:27] 2025-07-25 22:02:52,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 15:03:27] 2025-07-25 22:02:52,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | WARNING  | wrong length of table data, x=[1753480762.0, 1753480823.0], y=[1620.0, 466586.0] (must be same and length>=4)
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | could have reported an average CPU frequency of 2504 MHz (4 samples)
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | ..............................
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . Timing measurements:
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . get job = 0 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . initial setup = 3 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . payload setup = 31 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . stage-in = 0 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . payload execution = 80 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . stage-out = 1 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . log creation = 0 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | ..............................
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 15:03:27] 2025-07-25 22:02:52,611 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745060644/pilotlog.txt
[2025-07-25 15:03:27] 2025-07-25 22:02:52,727 | WARNING  | 
[2025-07-25 15:03:27] [begin log extracts]
[2025-07-25 15:03:27] - Log from pilotlog.txt -
[2025-07-25 15:03:27] 2025-07-25 22:02:52,604 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745060644/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 15:03:27] 2025-07-25 22:02:52,604 | INFO     | extracted standard info from prmon json
[2025-07-25 15:03:27] 2025-07-25 22:02:52,604 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 15:03:27] 2025-07-25 22:02:52,605 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 15:03:27] 2025-07-25 22:02:52,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 15:03:27] 2025-07-25 22:02:52,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | WARNING  | wrong length of table data, x=[1753480762.0, 1753480823.0], y=[1620.0, 466586.0] (must be same and length>=4)
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | could have reported an average CPU frequency of 2504 MHz (4 samples)
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | ..............................
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . Timing measurements:
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . get job = 0 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . initial setup = 3 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . payload setup = 31 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . stage-in = 0 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . payload execution = 80 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . stage-out = 1 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | . log creation = 0 s
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | ..............................
[2025-07-25 15:03:27] 2025-07-25 22:02:52,610 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 15:03:27] 2025-07-25 22:02:52,611 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745060644/pilotlog.txt
[2025-07-25 15:03:27] [end log extracts]
[2025-07-25 15:03:27] 2025-07-25 22:02:52,727 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 15:03:27] 2025-07-25 22:02:52,728 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 15:03:27] 2025-07-25 22:02:53,177 | INFO     | 
[2025-07-25 15:03:27] 2025-07-25 22:02:53,177 | INFO     | job summary report
[2025-07-25 15:03:27] 2025-07-25 22:02:53,177 | INFO     | --------------------------------------------------
[2025-07-25 15:03:27] 2025-07-25 22:02:53,177 | INFO     | PanDA job id: 6745060644
[2025-07-25 15:03:27] 2025-07-25 22:02:53,177 | INFO     | task id: 45743349
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 15:00:19,668 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | pilot state: failed 
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | transexitcode: 65
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | exeerrorcode: 65
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | exitcode: 65
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | cpuconsumptiontime: 18 s
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | nevents: 0
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | neventsw: 0
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | pid: 1511548
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | pgrp: 1511548
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | corecount: 12
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | event service: False
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | sizes: {0: 2397295, 1: 2397494, 12: 2397494, 23: 2397522, 24: 2397812, 34: 2397840, 115: 2421200, 118: 2425492, 120: 2425548, 259: 2425714}
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | --------------------------------------------------
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | 
[2025-07-25 15:03:27] 2025-07-25 22:02:53,178 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 15:03:27] 2025-07-25 22:02:53,376 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,378 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 15:03:27] 2025-07-25 22:02:53,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,378 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 15:03:27] 2025-07-25 22:02:53,378 | INFO     | job 6745060644 has completed (purged errors)
[2025-07-25 15:03:27] 2025-07-25 22:02:53,378 | INFO     | overall cleanup function is called
[2025-07-25 15:03:27] 2025-07-25 22:02:54,385 | INFO     | --- collectZombieJob: --- 10, [1511548]
[2025-07-25 15:03:27] 2025-07-25 22:02:54,385 | INFO     | zombie collector waiting for pid 1511548
[2025-07-25 15:03:27] 2025-07-25 22:02:54,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 15:03:27] 2025-07-25 22:02:54,385 | INFO     | collected zombie processes
[2025-07-25 15:03:27] 2025-07-25 22:02:54,385 | INFO     | will attempt to kill all subprocesses of pid=1511548
[2025-07-25 15:03:27] 2025-07-25 22:02:55,142 | INFO     | process IDs to be killed: [1511548] (in reverse order)
[2025-07-25 15:03:27] 2025-07-25 22:02:55,507 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 15:03:27] 2025-07-25 22:02:55,529 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 15:03:27] 2025-07-25 22:02:55,552 | INFO     | did not find any defunct processes belonging to 1511548
[2025-07-25 15:03:27] 2025-07-25 22:02:55,600 | INFO     | did not find any defunct processes belonging to 1511548
[2025-07-25 15:03:27] 2025-07-25 22:02:55,601 | INFO     | ready for new job
[2025-07-25 15:03:27] 2025-07-25 22:02:55,601 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 15:03:27] 2025-07-25 22:02:55,602 | INFO     | ***************************************
[2025-07-25 15:03:27] 2025-07-25 22:02:55,602 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 15:03:27] 2025-07-25 22:02:55,602 | INFO     | ***************************************
[2025-07-25 15:03:27] 2025-07-25 22:02:55,602 | INFO     | 
[2025-07-25 15:03:27] 2025-07-25 22:02:55,608 | INFO     | architecture information:
[2025-07-25 15:03:27] 2025-07-25 22:02:55,625 | INFO     | executing command: cat /etc/os-release
[2025-07-25 15:03:27] 2025-07-25 22:02:55,739 | INFO     | cat /etc/os-release:
[2025-07-25 15:03:27] NAME="CentOS Linux"
[2025-07-25 15:03:27] VERSION="7 (Core)"
[2025-07-25 15:03:27] ID="centos"
[2025-07-25 15:03:27] ID_LIKE="rhel fedora"
[2025-07-25 15:03:27] VERSION_ID="7"
[2025-07-25 15:03:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 15:03:27] ANSI_COLOR="0;31"
[2025-07-25 15:03:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 15:03:27] HOME_URL="https://www.centos.org/"
[2025-07-25 15:03:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 15:03:27] 
[2025-07-25 15:03:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 15:03:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 15:03:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 15:03:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 15:03:27] 
[2025-07-25 15:03:27] 2025-07-25 22:02:55,739 | INFO     | ***************************************
[2025-07-25 15:03:27] 2025-07-25 22:02:56,243 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 15:03:27] 2025-07-25 22:02:56,333 | INFO     | sufficient remaining disk space (1927108624384 B)
[2025-07-25 15:03:27] 2025-07-25 22:02:56,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 15:03:27] 2025-07-25 22:02:56,333 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 15:03:27] 2025-07-25 22:02:56,333 | INFO     | update_server=False
[2025-07-25 15:03:27] 2025-07-25 22:02:56,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 15:03:27] 2025-07-25 22:02:56,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 15:03:27] 2025-07-25 22:02:56,334 | INFO     | aborting loop
[2025-07-25 15:03:27] 2025-07-25 22:02:56,335 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 15:03:27] 2025-07-25 22:02:56,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 15:03:27] 2025-07-25 22:02:56,450 | INFO     | all data control threads have been joined
[2025-07-25 15:03:27] 2025-07-25 22:02:56,454 | INFO     | all payload control threads have been joined
[2025-07-25 15:03:27] 2025-07-25 22:02:57,340 | INFO     | [job] retrieve thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:57,344 | INFO     | [job] job monitor thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:57,386 | INFO     | [payload] validate_post thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:57,386 | INFO     | [payload] failed_post thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:57,456 | INFO     | [data] control thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:57,460 | INFO     | [payload] control thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:57,644 | INFO     | [data] copytool_in thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:57,752 | INFO     | all job control threads have been joined
[2025-07-25 15:03:27] 2025-07-25 22:02:58,114 | INFO     | [job] validate thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:58,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 15:03:27] 2025-07-25 22:02:58,143 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:58,144 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:58,145 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:58,147 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:58,345 | INFO     | [data] copytool_out thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:58,758 | INFO     | [job] control thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:02:59,142 | INFO     | [job] queue monitor thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:03:00,344 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 15:03:27] 2025-07-25 22:03:02,271 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140166950176576)>', '<ExcThread(monitor, started 140166022805248)>']
[2025-07-25 15:03:27] 2025-07-25 22:03:07,297 | INFO     | all workflow threads have been joined
[2025-07-25 15:03:27] 2025-07-25 22:03:07,298 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 15:03:27] 2025-07-25 22:03:07,298 | INFO     | traces error code: 0
[2025-07-25 15:03:27] 2025-07-25 22:03:07,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 15:03:27] 2025-07-25 22:03:26,460 | INFO     | PID=1505189 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 15:03:27] 2025-07-25 22:03:26,460 | INFO     | .. there are 28 such processes running
[2025-07-25 15:03:27] 2025-07-25 22:03:26,460 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 15:03:27] 2025-07-25 22:03:26,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 15:03:27] 2025-07-25 22:03:26,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 15:03:27] 2025-07-25 22:03:26,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 15:03:27] 2025-07-25 22:03:26,460 | INFO     | [monitor] control thread has ended
[2025-07-25 15:03:27] 2025-07-25 22:03:26,992 [wrapper] ==== pilot stdout END ====
[2025-07-25 15:03:27] 2025-07-25 22:03:27,005 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 15:03:27] 2025-07-25 22:03:27,007 [wrapper] pilotpid: 1505189
[2025-07-25 15:03:27] 2025-07-25 22:03:27,009 [wrapper] Pilot exit status: 0
[2025-07-25 15:03:27] 2025-07-25 22:03:27,019 [wrapper] pandaids: 6745060644
[2025-07-25 15:03:27] 2025-07-25 22:03:27,064 [wrapper] cleanup supervisor_pilot 1505195 1505190
[2025-07-25 15:03:27] 2025-07-25 22:03:27,067 [wrapper] Test setup, not cleaning
[2025-07-25 15:03:27] 2025-07-25 22:03:27,069 [wrapper] apfmon messages muted
[2025-07-25 15:03:27] 2025-07-25 22:03:27,071 [wrapper] ==== wrapper stdout END ====
[2025-07-25 15:03:27] 2025-07-25 22:03:27,072 [wrapper] ==== wrapper stderr END ====
[2025-07-25 15:03:27]  *** Error codes and diagnostics ***
[2025-07-25 15:03:27]     "exeErrorCode": 65,
[2025-07-25 15:03:27]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 15:03:27]     "pilotErrorCode": 1305,
[2025-07-25 15:03:27]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 15:03:27]  *** Listing of results directory ***
[2025-07-25 15:03:27] total 230244
[2025-07-25 15:03:27] -rw-r--r--. 1 boinc boinc    530466 Jul 25 11:56 pilot3.tar.gz
[2025-07-25 15:03:27] -rw-r--r--. 1 boinc boinc      5112 Jul 25 12:14 queuedata.json
[2025-07-25 15:03:27] -rwx------. 1 boinc boinc     36292 Jul 25 12:15 runpilot2-wrapper.sh
[2025-07-25 15:03:27] -rw-r--r--. 1 boinc boinc       100 Jul 25 14:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 15:03:27] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 14:56 run_atlas
[2025-07-25 15:03:27] -rw-r--r--. 1 boinc boinc       105 Jul 25 14:56 job.xml
[2025-07-25 15:03:27] -rw-r--r--. 2 boinc boinc 231685547 Jul 25 14:56 EVNT.45743347._001448.pool.root.1
[2025-07-25 15:03:27] -rw-r--r--. 1 boinc boinc      6595 Jul 25 14:56 init_data.xml
[2025-07-25 15:03:27] -rw-r--r--. 2 boinc boinc     15095 Jul 25 14:56 start_atlas.sh
[2025-07-25 15:03:27] drwxrwx--x. 2 boinc boinc      4096 Jul 25 14:56 shared
[2025-07-25 15:03:27] -rw-r--r--. 2 boinc boinc    542884 Jul 25 14:56 input.tar.gz
[2025-07-25 15:03:27] -rw-r--r--. 1 boinc boinc         0 Jul 25 14:56 boinc_lockfile
[2025-07-25 15:03:27] -rw-r--r--. 1 boinc boinc      2560 Jul 25 14:56 pandaJob.out
[2025-07-25 15:03:27] -rw-------. 1 boinc boinc    980001 Jul 25 14:57 agis_schedconf.cvmfs.json
[2025-07-25 15:03:27] -rw-------. 1 boinc boinc   1593052 Jul 25 14:57 agis_ddmendpoints.agis.ALL.json
[2025-07-25 15:03:27] drwx------. 4 boinc boinc      4096 Jul 25 14:57 pilot3
[2025-07-25 15:03:27] -rw-r--r--. 1 boinc boinc       524 Jul 25 15:00 boinc_task_state.xml
[2025-07-25 15:03:27] -rw-------. 1 boinc boinc       986 Jul 25 15:00 memory_monitor_summary.json
[2025-07-25 15:03:27] -rw-------. 1 boinc boinc     21895 Jul 25 15:00 log.45743349._025826.job.log.tgz.1
[2025-07-25 15:03:27] -rw-------. 1 boinc boinc        95 Jul 25 15:02 pilot_heartbeat.json
[2025-07-25 15:03:27] -rw-------. 1 boinc boinc      8404 Jul 25 15:02 heartbeat.json
[2025-07-25 15:03:27] -rw-r--r--. 1 boinc boinc        23 Jul 25 15:03 wrapper_checkpoint.txt
[2025-07-25 15:03:27] -rw-r--r--. 1 boinc boinc      8192 Jul 25 15:03 boinc_mmap_file
[2025-07-25 15:03:27] -rw-------. 1 boinc boinc       823 Jul 25 15:03 pilotlog.txt
[2025-07-25 15:03:27] -rw-------. 1 boinc boinc     83960 Jul 25 15:03 log.45743349._025826.job.log.1
[2025-07-25 15:03:27] -rw-------. 1 boinc boinc       188 Jul 25 15:03 output.list
[2025-07-25 15:03:27] -rw-r--r--. 1 boinc boinc       620 Jul 25 15:03 runtime_log
[2025-07-25 15:03:27] -rw-------. 1 boinc boinc    122880 Jul 25 15:03 result.tar.gz
[2025-07-25 15:03:27] -rw-------. 1 boinc boinc       644 Jul 25 15:03 wpHKDmi4cz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxSzKDmTwk00n.diag
[2025-07-25 15:03:27] -rw-r--r--. 1 boinc boinc      8485 Jul 25 15:03 runtime_log.err
[2025-07-25 15:03:27] -rw-r--r--. 1 boinc boinc     21905 Jul 25 15:03 stderr.txt
[2025-07-25 15:03:27] No HITS result produced
[2025-07-25 15:03:27]  *** Contents of shared directory: ***
[2025-07-25 15:03:27] total 226928
[2025-07-25 15:03:27] -rw-r--r--. 2 boinc boinc 231685547 Jul 25 14:56 ATLAS.root_0
[2025-07-25 15:03:27] -rw-r--r--. 2 boinc boinc     15095 Jul 25 14:56 start_atlas.sh
[2025-07-25 15:03:27] -rw-r--r--. 2 boinc boinc    542884 Jul 25 14:56 input.tar.gz
[2025-07-25 15:03:27] -rw-------. 1 boinc boinc    122880 Jul 25 15:03 result.tar.gz
15:03:29 (1501606): run_atlas exited; CPU time 30.111095
15:03:29 (1501606): called boinc_finish(0)

</stderr_txt>
]]>

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