Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:01:29 (3047558): wrapper (7.7.26015): starting
18:01:29 (3047558): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 18:01:29] Arguments: --nthreads 8
[2025-07-25 18:01:29] Threads: 8
[2025-07-25 18:01:29] Checking for CVMFS
[2025-07-25 18:01:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 18:01:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 18:01:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 18:01:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 18:01:29] 2.13.0.0 3724680 16639 263216 148754 2 801 24628143 32935936 23622 16776704 0 80483710 99.515 120022311 20239 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 18:01:29] CVMFS is ok
[2025-07-25 18:01:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 18:01:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 18:01:29] Further information can be found at the LHC@home message board.
[2025-07-25 18:01:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 18:01:29] Checking for apptainer binary...
[2025-07-25 18:01:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 18:01:29] Running /usr/bin/apptainer --version
[2025-07-25 18:01:29] apptainer version 1.4.1-1.el9
[2025-07-25 18:01:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 18:01:29] c7-4-31.aglt2.org
[2025-07-25 18:01:29] apptainer works
[2025-07-25 18:01:29] Set ATHENA_PROC_NUMBER=8
[2025-07-25 18:01:29] Set ATHENA_CORE_NUMBER=8
[2025-07-25 18:01:29] Starting ATLAS job with PandaID=6745057849
[2025-07-25 18:01:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 19:32:52]  *** The last 200 lines of the pilot log: ***
[2025-07-25 19:32:52]  status=None
[2025-07-25 19:32:52]  status_code=0
[2025-07-25 19:32:52]  storage_token=
[2025-07-25 19:32:52]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6745057849/log.45743349._023388.job.log.tgz.1
[2025-07-25 19:32:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/33/log.45743349._023388.job.log.tgz.1
[2025-07-25 19:32:52]  workdir=None
[2025-07-25 19:32:52] ]
[2025-07-25 19:32:52] 2025-07-25 23:32:09,858 | INFO     | transferring file log.45743349._023388.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6745057849/log.45743349._023388.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 19:32:52] 2025-07-25 23:32:09,858 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6745057849/log.45743349._023388.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._023388.job
[2025-07-25 19:32:52] 2025-07-25 23:32:09,925 | INFO     | adding to output.list: log.45743349._023388.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/33/log.45743349._023388.job.log.tg
[2025-07-25 19:32:52] 2025-07-25 23:32:09,925 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 19:32:52] 2025-07-25 23:32:09,925 | INFO     | summary of transferred files:
[2025-07-25 19:32:52] 2025-07-25 23:32:09,925 | INFO     |  -- lfn=log.45743349._023388.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 19:32:52] 2025-07-25 23:32:09,926 | INFO     | stage-out finished correctly
[2025-07-25 19:32:52] 2025-07-25 23:32:10,052 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 19:32:52] 2025-07-25 23:32:10,270 | INFO     | job 6745057849 has state=finished
[2025-07-25 19:32:52] 2025-07-25 23:32:10,270 | INFO     | preparing for final server update for job 6745057849 in state='finished'
[2025-07-25 19:32:52] 2025-07-25 23:32:10,271 | INFO     | this job has now completed (state=finished)
[2025-07-25 19:32:52] 2025-07-25 23:32:10,271 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 19:32:52] 2025-07-25 23:32:10,271 | INFO     | log transfer has been attempted: DONE
[2025-07-25 19:32:52] 2025-07-25 23:32:10,271 | INFO     | job 6745057849 has finished - writing final server update
[2025-07-25 19:32:52] 2025-07-25 23:32:10,271 | INFO     | total number of processed events: 400 (read)
[2025-07-25 19:32:52] 2025-07-25 23:32:10,282 | INFO     | executing command: lscpu
[2025-07-25 19:32:52] 2025-07-25 23:32:10,310 | INFO     | monitor loop #366: job 0:6745057849 is in state 'finished'
[2025-07-25 19:32:52] 2025-07-25 23:32:10,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 19:32:52] 2025-07-25 23:32:10,369 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 19:32:52] 2025-07-25 23:32:12,815 | INFO     | monitor loop #367: job 0:6745057849 is in state 'finished'
[2025-07-25 19:32:52] 2025-07-25 23:32:12,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 19:32:52] 2025-07-25 23:32:15,321 | INFO     | monitor loop #368: job 0:6745057849 is in state 'finished'
[2025-07-25 19:32:52] 2025-07-25 23:32:15,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 19:32:52] 2025-07-25 23:32:16,984 | INFO     | PID=3053261 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-25 19:32:52] 2025-07-25 23:32:16,984 | INFO     | .. there are 37 such processes running
[2025-07-25 19:32:52] 2025-07-25 23:32:17,826 | INFO     | monitor loop #369: job 0:6745057849 is in state 'finished'
[2025-07-25 19:32:52] 2025-07-25 23:32:17,826 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 19:32:52] 2025-07-25 23:32:19,636 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 19:32:52] 2025-07-25 23:32:19,643 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3131.722750000001
[2025-07-25 19:32:52] 2025-07-25 23:32:19,667 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745057849/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 19:32:52] 2025-07-25 23:32:19,667 | INFO     | extracted standard info from prmon json
[2025-07-25 19:32:52] 2025-07-25 23:32:19,667 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 19:32:52] 2025-07-25 23:32:19,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 19:32:52] 2025-07-25 23:32:19,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 19:32:52] 2025-07-25 23:32:19,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 19:32:52] 2025-07-25 23:32:19,669 | INFO     | fitting pss+swap vs Time
[2025-07-25 19:32:52] 2025-07-25 23:32:19,670 | INFO     | sum of square deviations: 170944600.5
[2025-07-25 19:32:52] 2025-07-25 23:32:19,670 | INFO     | sum of deviations: -204143758.99999988
[2025-07-25 19:32:52] 2025-07-25 23:32:19,670 | INFO     | mean x: 1753483731.5
[2025-07-25 19:32:52] 2025-07-25 23:32:19,670 | INFO     | mean y: 2177986.1219512196
[2025-07-25 19:32:52] 2025-07-25 23:32:19,670 | INFO     | -- intersect: 2096205871.4528863
[2025-07-25 19:32:52] 2025-07-25 23:32:19,670 | INFO     | intersect: 2096205871.4528863
[2025-07-25 19:32:52] 2025-07-25 23:32:19,670 | INFO     | chi2: 0.03051469190039761
[2025-07-25 19:32:52] 2025-07-25 23:32:19,671 | INFO     | -- intersect: 2096205871.4528863
[2025-07-25 19:32:52] 2025-07-25 23:32:19,671 | INFO     | current memory leak: -1.19 B/s (using 82 data points, chi2=0.03)
[2025-07-25 19:32:52] 2025-07-25 23:32:19,671 | INFO     | could have reported an average CPU frequency of 3167 MHz (6 samples)
[2025-07-25 19:32:52] 2025-07-25 23:32:19,671 | INFO     | ..............................
[2025-07-25 19:32:52] 2025-07-25 23:32:19,671 | INFO     | . Timing measurements:
[2025-07-25 19:32:52] 2025-07-25 23:32:19,671 | INFO     | . get job = 0 s
[2025-07-25 19:32:52] 2025-07-25 23:32:19,671 | INFO     | . initial setup = 3 s
[2025-07-25 19:32:52] 2025-07-25 23:32:19,671 | INFO     | . payload setup = 14 s
[2025-07-25 19:32:52] 2025-07-25 23:32:19,671 | INFO     | . stage-in = 0 s
[2025-07-25 19:32:52] 2025-07-25 23:32:19,671 | INFO     | . payload execution = 5377 s
[2025-07-25 19:32:52] 2025-07-25 23:32:19,671 | INFO     | . stage-out = 0 s
[2025-07-25 19:32:52] 2025-07-25 23:32:19,672 | INFO     | . log creation = 0 s
[2025-07-25 19:32:52] 2025-07-25 23:32:19,672 | INFO     | ..............................
[2025-07-25 19:32:52] 2025-07-25 23:32:19,759 | INFO     | 
[2025-07-25 19:32:52] 2025-07-25 23:32:19,759 | INFO     | job summary report
[2025-07-25 19:32:52] 2025-07-25 23:32:19,759 | INFO     | --------------------------------------------------
[2025-07-25 19:32:52] 2025-07-25 23:32:19,759 | INFO     | PanDA job id: 6745057849
[2025-07-25 19:32:52] 2025-07-25 23:32:19,759 | INFO     | task id: 45743349
[2025-07-25 19:32:52] 2025-07-25 23:32:19,759 | INFO     | errors: (none)
[2025-07-25 19:32:52] 2025-07-25 23:32:19,759 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 19:32:52] 2025-07-25 23:32:19,759 | INFO     | pilot state: finished 
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | transexitcode: 0
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | exeerrorcode: 0
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | exeerrordiag: 
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | exitcode: 0
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | exitmsg: OK
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | cpuconsumptiontime: 35479 s
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | nevents: 400
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | neventsw: 0
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | pid: 3061255
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | pgrp: 3061255
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | corecount: 8
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | event service: False
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | sizes: {0: 2397473, 10: 2397735, 11: 2397763, 5396: 2424422, 5398: 2433476, 5408: 2433614}
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | --------------------------------------------------
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | 
[2025-07-25 19:32:52] 2025-07-25 23:32:19,760 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-25 19:32:52] 2025-07-25 23:32:19,826 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,826 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,826 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,827 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,828 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 19:32:52] 2025-07-25 23:32:19,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,830 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 19:32:52] 2025-07-25 23:32:19,830 | INFO     | job 6745057849 has completed (purged errors)
[2025-07-25 19:32:52] 2025-07-25 23:32:19,830 | INFO     | overall cleanup function is called
[2025-07-25 19:32:52] 2025-07-25 23:32:20,845 | INFO     | --- collectZombieJob: --- 10, [3061255]
[2025-07-25 19:32:52] 2025-07-25 23:32:20,845 | INFO     | zombie collector waiting for pid 3061255
[2025-07-25 19:32:52] 2025-07-25 23:32:20,845 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 19:32:52] 2025-07-25 23:32:20,845 | INFO     | collected zombie processes
[2025-07-25 19:32:52] 2025-07-25 23:32:20,845 | INFO     | will attempt to kill all subprocesses of pid=3061255
[2025-07-25 19:32:52] 2025-07-25 23:32:21,568 | INFO     | process IDs to be killed: [3061255] (in reverse order)
[2025-07-25 19:32:52] 2025-07-25 23:32:21,728 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 19:32:52] 2025-07-25 23:32:21,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 19:32:52] 2025-07-25 23:32:21,751 | INFO     | did not find any defunct processes belonging to 3061255
[2025-07-25 19:32:52] 2025-07-25 23:32:21,772 | INFO     | did not find any defunct processes belonging to 3061255
[2025-07-25 19:32:52] 2025-07-25 23:32:21,773 | INFO     | ready for new job
[2025-07-25 19:32:52] 2025-07-25 23:32:21,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 19:32:52] 2025-07-25 23:32:21,774 | INFO     | ***************************************
[2025-07-25 19:32:52] 2025-07-25 23:32:21,774 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 19:32:52] 2025-07-25 23:32:21,775 | INFO     | ***************************************
[2025-07-25 19:32:52] 2025-07-25 23:32:21,775 | INFO     | 
[2025-07-25 19:32:52] 2025-07-25 23:32:21,797 | INFO     | architecture information:
[2025-07-25 19:32:52] 2025-07-25 23:32:21,799 | INFO     | executing command: cat /etc/os-release
[2025-07-25 19:32:52] 2025-07-25 23:32:21,830 | INFO     | cat /etc/os-release:
[2025-07-25 19:32:52] NAME="CentOS Linux"
[2025-07-25 19:32:52] VERSION="7 (Core)"
[2025-07-25 19:32:52] ID="centos"
[2025-07-25 19:32:52] ID_LIKE="rhel fedora"
[2025-07-25 19:32:52] VERSION_ID="7"
[2025-07-25 19:32:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 19:32:52] ANSI_COLOR="0;31"
[2025-07-25 19:32:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 19:32:52] HOME_URL="https://www.centos.org/"
[2025-07-25 19:32:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 19:32:52] 
[2025-07-25 19:32:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 19:32:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 19:32:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 19:32:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 19:32:52] 
[2025-07-25 19:32:52] 2025-07-25 23:32:21,830 | INFO     | ***************************************
[2025-07-25 19:32:52] 2025-07-25 23:32:22,343 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-25 19:32:52] 2025-07-25 23:32:22,362 | INFO     | sufficient remaining disk space (75941019648 B)
[2025-07-25 19:32:52] 2025-07-25 23:32:22,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 19:32:52] 2025-07-25 23:32:22,362 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 19:32:52] 2025-07-25 23:32:22,363 | INFO     | update_server=False
[2025-07-25 19:32:52] 2025-07-25 23:32:22,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 19:32:52] 2025-07-25 23:32:22,426 | INFO     | all job control threads have been joined
[2025-07-25 19:32:52] 2025-07-25 23:32:22,859 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-25 19:32:52] 2025-07-25 23:32:22,860 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-25 19:32:52] 2025-07-25 23:32:22,860 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 19:32:52] 2025-07-25 23:32:22,860 | INFO     | will abort loop
[2025-07-25 19:32:52] 2025-07-25 23:32:23,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 19:32:52] 2025-07-25 23:32:23,172 | INFO     | all data control threads have been joined
[2025-07-25 19:32:52] 2025-07-25 23:32:23,336 | INFO     | all payload control threads have been joined
[2025-07-25 19:32:52] 2025-07-25 23:32:23,369 | INFO     | [job] retrieve thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:23,385 | INFO     | [job] validate thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:23,431 | INFO     | [job] control thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:23,698 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:23,702 | INFO     | [data] copytool_in thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:23,811 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:23,866 | INFO     | [job] job monitor thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:24,073 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:24,119 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:24,178 | INFO     | [data] control thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:24,342 | INFO     | [payload] control thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:24,436 | INFO     | [payload] failed_post thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:24,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 19:32:52] 2025-07-25 23:32:24,846 | INFO     | [payload] validate_post thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:25,087 | INFO     | [data] copytool_out thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:25,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 19:32:52] 2025-07-25 23:32:25,776 | INFO     | [job] queue monitor thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:29,349 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 19:32:52] 2025-07-25 23:32:30,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594132547392)>', '<ExcThread(monitor, started 140593783097088)>']
[2025-07-25 19:32:52] 2025-07-25 23:32:35,982 | INFO     | all workflow threads have been joined
[2025-07-25 19:32:52] 2025-07-25 23:32:35,982 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 19:32:52] 2025-07-25 23:32:35,982 | INFO     | traces error code: 0
[2025-07-25 19:32:52] 2025-07-25 23:32:35,982 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 19:32:52] 2025-07-25 23:32:51,857 | INFO     | PID=3053261 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 19:32:52] 2025-07-25 23:32:51,857 | INFO     | .. there are 37 such processes running
[2025-07-25 19:32:52] 2025-07-25 23:32:51,857 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 19:32:52] 2025-07-25 23:32:51,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 19:32:52] 2025-07-25 23:32:51,858 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 19:32:52] 2025-07-25 23:32:51,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 19:32:52] 2025-07-25 23:32:51,858 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 19:32:52] 2025-07-25 23:32:51,858 | INFO     | [monitor] control thread has ended
[2025-07-25 19:32:52] 2025-07-25 23:32:51,984 [wrapper] ==== pilot stdout END ====
[2025-07-25 19:32:52] 2025-07-25 23:32:52,000 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 19:32:52] 2025-07-25 23:32:52,019 [wrapper] pilotpid: 3053261
[2025-07-25 19:32:52] 2025-07-25 23:32:52,031 [wrapper] Pilot exit status: 0
[2025-07-25 19:32:52] 2025-07-25 23:32:52,089 [wrapper] pandaids: 6745057849
[2025-07-25 19:32:52] 2025-07-25 23:32:52,209 [wrapper] cleanup supervisor_pilot 3511059 3053262
[2025-07-25 19:32:52] 2025-07-25 23:32:52,217 [wrapper] Test setup, not cleaning
[2025-07-25 19:32:52] 2025-07-25 23:32:52,223 [wrapper] apfmon messages muted
[2025-07-25 19:32:52] 2025-07-25 23:32:52,229 [wrapper] ==== wrapper stdout END ====
[2025-07-25 19:32:52] 2025-07-25 23:32:52,234 [wrapper] ==== wrapper stderr END ====
[2025-07-25 19:32:52]  *** Error codes and diagnostics ***
[2025-07-25 19:32:52]     "exeErrorCode": 0,
[2025-07-25 19:32:52]     "exeErrorDiag": "",
[2025-07-25 19:32:52]     "pilotErrorCode": 0,
[2025-07-25 19:32:52]     "pilotErrorDiag": "",
[2025-07-25 19:32:52]  *** Listing of results directory ***
[2025-07-25 19:32:52] total 355208
[2025-07-25 19:32:52] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 11:55 pilot3.tar.gz
[2025-07-25 19:32:52] -rwx------. 1 boincer umatlas     36292 Jul 25 12:04 runpilot2-wrapper.sh
[2025-07-25 19:32:52] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 12:04 queuedata.json
[2025-07-25 19:32:52] -rw-r--r--. 1 boincer umatlas       100 Jul 25 18:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 19:32:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 18:01 run_atlas
[2025-07-25 19:32:52] -rw-r--r--. 1 boincer umatlas       105 Jul 25 18:01 job.xml
[2025-07-25 19:32:52] -rw-r--r--. 2 boincer umatlas 145094207 Jul 25 18:01 EVNT.45743347._001320.pool.root.1
[2025-07-25 19:32:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 18:01 start_atlas.sh
[2025-07-25 19:32:52] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 18:01 shared
[2025-07-25 19:32:52] -rw-r--r--. 2 boincer umatlas    542896 Jul 25 18:01 input.tar.gz
[2025-07-25 19:32:52] -rw-r--r--. 1 boincer umatlas         0 Jul 25 18:01 boinc_lockfile
[2025-07-25 19:32:52] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 18:01 pandaJob.out
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas    980001 Jul 25 18:01 agis_schedconf.cvmfs.json
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas   1593052 Jul 25 18:01 agis_ddmendpoints.agis.ALL.json
[2025-07-25 19:32:52] drwx------. 4 boincer umatlas      4096 Jul 25 18:01 pilot3
[2025-07-25 19:32:52] -rw-r--r--. 1 boincer umatlas      6934 Jul 25 19:28 init_data.xml
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas 213138675 Jul 25 19:31 HITS.45743349._023388.pool.root.1
[2025-07-25 19:32:52] -rw-r--r--. 1 boincer umatlas       530 Jul 25 19:31 boinc_task_state.xml
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas      1032 Jul 25 19:32 memory_monitor_summary.json
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas    304045 Jul 25 19:32 log.45743349._023388.job.log.tgz.1
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas        95 Jul 25 19:32 pilot_heartbeat.json
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas      7769 Jul 25 19:32 heartbeat.json
[2025-07-25 19:32:52] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 19:32 boinc_mmap_file
[2025-07-25 19:32:52] -rw-r--r--. 1 boincer umatlas        27 Jul 25 19:32 wrapper_checkpoint.txt
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas       893 Jul 25 19:32 pilotlog.txt
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas    505321 Jul 25 19:32 log.45743349._023388.job.log.1
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas       357 Jul 25 19:32 output.list
[2025-07-25 19:32:52] -rw-r--r--. 1 boincer umatlas       620 Jul 25 19:32 runtime_log
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas    829440 Jul 25 19:32 result.tar.gz
[2025-07-25 19:32:52] -rw-r--r--. 1 boincer umatlas      8655 Jul 25 19:32 runtime_log.err
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas       652 Jul 25 19:32 J2HLDmv5Zz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmoBzKDmP6CvMm.diag
[2025-07-25 19:32:52] -rw-r--r--. 1 boincer umatlas     22092 Jul 25 19:32 stderr.txt
[2025-07-25 19:32:52] HITS file was successfully produced:
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas 213138675 Jul 25 19:31 shared/HITS.pool.root.1
[2025-07-25 19:32:52]  *** Contents of shared directory: ***
[2025-07-25 19:32:52] total 351208
[2025-07-25 19:32:52] -rw-r--r--. 2 boincer umatlas 145094207 Jul 25 18:01 ATLAS.root_0
[2025-07-25 19:32:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 18:01 start_atlas.sh
[2025-07-25 19:32:52] -rw-r--r--. 2 boincer umatlas    542896 Jul 25 18:01 input.tar.gz
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas 213138675 Jul 25 19:31 HITS.pool.root.1
[2025-07-25 19:32:52] -rw-------. 1 boincer umatlas    829440 Jul 25 19:32 result.tar.gz
19:32:54 (3047558): run_atlas exited; CPU time 35639.936911
19:32:54 (3047558): called boinc_finish(0)

</stderr_txt>
]]>

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