Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:59:32 (3277894): wrapper (7.7.26015): starting
10:59:32 (3277894): wrapper: running run_atlas (--nthreads 3)
[2025-07-26 10:59:32] Arguments: --nthreads 3
[2025-07-26 10:59:32] Threads: 3
[2025-07-26 10:59:32] Checking for CVMFS
[2025-07-26 10:59:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 10:59:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 10:59:32] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 10:59:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 10:59:32] 2.9.2.0 1693042 6327 83236 148770 3 57 11292489 36864001 0 130560 0 4179682 99.988 236340 2570 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-26 10:59:32] CVMFS is ok
[2025-07-26 10:59:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 10:59:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 10:59:32] Further information can be found at the LHC@home message board.
[2025-07-26 10:59:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 10:59:32] Checking for apptainer binary...
[2025-07-26 10:59:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 10:59:32] Running /usr/bin/apptainer --version
[2025-07-26 10:59:32] apptainer version 1.4.1-1.1
[2025-07-26 10:59:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 10:59:32] magicA250a
[2025-07-26 10:59:32] apptainer works
[2025-07-26 10:59:32] Set ATHENA_PROC_NUMBER=3
[2025-07-26 10:59:32] Set ATHENA_CORE_NUMBER=3
[2025-07-26 10:59:32] Starting ATLAS job with PandaID=6745060336
[2025-07-26 10:59:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:35:38]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:35:38]  is_tar=False
[2025-07-26 12:35:38]  lfn=log.45743349._025527.job.log.tgz.1
[2025-07-26 12:35:38]  mtime=0
[2025-07-26 12:35:38]  protocol_id=None
[2025-07-26 12:35:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 12:35:38]  replicas=None
[2025-07-26 12:35:38]  scope=mc23_13p6TeV
[2025-07-26 12:35:38]  status=None
[2025-07-26 12:35:38]  status_code=0
[2025-07-26 12:35:38]  storage_token=
[2025-07-26 12:35:38]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745060336/log.45743349._025527.job.log.tgz.1
[2025-07-26 12:35:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/87/log.45743349._025527.job.log.tgz.1
[2025-07-26 12:35:38]  workdir=None
[2025-07-26 12:35:38] ]
[2025-07-26 12:35:38] 2025-07-26 10:35:00,371 | INFO     | transferring file log.45743349._025527.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745060336/log.45743349._025527.job.log.tgz.1 to /local/data/boinc/
[2025-07-26 12:35:38] 2025-07-26 10:35:00,372 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745060336/log.45743349._025527.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0255
[2025-07-26 12:35:38] 2025-07-26 10:35:00,383 | INFO     | adding to output.list: log.45743349._025527.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/87/log.45743349._025527.job.log.tg
[2025-07-26 12:35:38] 2025-07-26 10:35:00,384 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 12:35:38] 2025-07-26 10:35:00,384 | INFO     | summary of transferred files:
[2025-07-26 12:35:38] 2025-07-26 10:35:00,384 | INFO     |  -- lfn=log.45743349._025527.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 12:35:38] 2025-07-26 10:35:00,384 | INFO     | stage-out finished correctly
[2025-07-26 12:35:38] 2025-07-26 10:35:03,050 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 12:35:38] 2025-07-26 10:35:03,609 | INFO     | job 6745060336 has state=finished
[2025-07-26 12:35:38] 2025-07-26 10:35:03,609 | INFO     | preparing for final server update for job 6745060336 in state='finished'
[2025-07-26 12:35:38] 2025-07-26 10:35:03,609 | INFO     | this job has now completed (state=finished)
[2025-07-26 12:35:38] 2025-07-26 10:35:03,609 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 12:35:38] 2025-07-26 10:35:03,610 | INFO     | log transfer has been attempted: DONE
[2025-07-26 12:35:38] 2025-07-26 10:35:03,610 | INFO     | job 6745060336 has finished - writing final server update
[2025-07-26 12:35:38] 2025-07-26 10:35:03,610 | INFO     | total number of processed events: 400 (read)
[2025-07-26 12:35:38] 2025-07-26 10:35:03,610 | INFO     | executing command: lscpu
[2025-07-26 12:35:38] 2025-07-26 10:35:03,625 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 12:35:38] 2025-07-26 10:35:04,071 | INFO     | PID=3281531 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:35:38] 2025-07-26 10:35:04,502 | WARNING  | process 3288014 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 12:35:38] 2025-07-26 10:35:04,502 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745060336/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:35:38] 2025-07-26 10:35:04,559 | INFO     | number of running child processes to parent process 3288014: 1
[2025-07-26 12:35:38] 2025-07-26 10:35:04,559 | INFO     | maximum number of monitored processes: 6
[2025-07-26 12:35:38] 2025-07-26 10:35:05,782 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 12:35:38] 2025-07-26 10:35:05,783 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3626.735416666667
[2025-07-26 12:35:38] 2025-07-26 10:35:05,784 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745060336/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:35:38] 2025-07-26 10:35:05,784 | INFO     | extracted standard info from prmon json
[2025-07-26 12:35:38] 2025-07-26 10:35:05,784 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 12:35:38] 2025-07-26 10:35:05,784 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 12:35:38] 2025-07-26 10:35:05,784 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 12:35:38] 2025-07-26 10:35:05,784 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 12:35:38] 2025-07-26 10:35:05,785 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:35:38] 2025-07-26 10:35:05,785 | INFO     | sum of square deviations: 204163828.0
[2025-07-26 12:35:38] 2025-07-26 10:35:05,785 | INFO     | sum of deviations: -5369233359.0
[2025-07-26 12:35:38] 2025-07-26 10:35:05,785 | INFO     | mean x: 1753523325.0
[2025-07-26 12:35:38] 2025-07-26 10:35:05,785 | INFO     | mean y: 2386166.6896551726
[2025-07-26 12:35:38] 2025-07-26 10:35:05,785 | INFO     | -- intersect: 46117684966.70333
[2025-07-26 12:35:38] 2025-07-26 10:35:05,785 | INFO     | intersect: 46117684966.70333
[2025-07-26 12:35:38] 2025-07-26 10:35:05,785 | INFO     | chi2: 0.07091728100771447
[2025-07-26 12:35:38] 2025-07-26 10:35:05,785 | INFO     | -- intersect: 46117684966.70333
[2025-07-26 12:35:38] 2025-07-26 10:35:05,786 | INFO     | current memory leak: -26.30 B/s (using 87 data points, chi2=0.07)
[2025-07-26 12:35:38] 2025-07-26 10:35:05,786 | INFO     | could have reported an average CPU frequency of 3821 MHz (7 samples)
[2025-07-26 12:35:38] 2025-07-26 10:35:05,786 | INFO     | ..............................
[2025-07-26 12:35:38] 2025-07-26 10:35:05,786 | INFO     | . Timing measurements:
[2025-07-26 12:35:38] 2025-07-26 10:35:05,786 | INFO     | . get job = 0 s
[2025-07-26 12:35:38] 2025-07-26 10:35:05,786 | INFO     | . initial setup = 1 s
[2025-07-26 12:35:38] 2025-07-26 10:35:05,786 | INFO     | . payload setup = 3 s
[2025-07-26 12:35:38] 2025-07-26 10:35:05,786 | INFO     | . stage-in = 0 s
[2025-07-26 12:35:38] 2025-07-26 10:35:05,786 | INFO     | . payload execution = 5702 s
[2025-07-26 12:35:38] 2025-07-26 10:35:05,786 | INFO     | . stage-out = 0 s
[2025-07-26 12:35:38] 2025-07-26 10:35:05,786 | INFO     | . log creation = 0 s
[2025-07-26 12:35:38] 2025-07-26 10:35:05,786 | INFO     | ..............................
[2025-07-26 12:35:38] 2025-07-26 10:35:05,850 | INFO     | 
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | job summary report
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | --------------------------------------------------
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | PanDA job id: 6745060336
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | task id: 45743349
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | errors: (none)
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | pilot state: finished 
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | transexitcode: 0
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | exeerrorcode: 0
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | exeerrordiag: 
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | exitcode: 0
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | exitmsg: OK
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | cpuconsumptiontime: 16548 s
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | nevents: 400
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | neventsw: 0
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | pid: 3288014
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | pgrp: 3288014
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | corecount: 3
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | event service: False
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | sizes: {0: 2397476, 2: 2397738, 11: 2397766, 5709: 2433614, 5712: 2433614, 5715: 2433808}
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | --------------------------------------------------
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | 
[2025-07-26 12:35:38] 2025-07-26 10:35:05,851 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,866 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:35:38] 2025-07-26 10:35:05,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,866 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:35:38] 2025-07-26 10:35:05,866 | INFO     | job 6745060336 has completed (purged errors)
[2025-07-26 12:35:38] 2025-07-26 10:35:05,866 | INFO     | overall cleanup function is called
[2025-07-26 12:35:38] 2025-07-26 10:35:06,872 | INFO     | --- collectZombieJob: --- 10, [3288014]
[2025-07-26 12:35:38] 2025-07-26 10:35:06,873 | INFO     | zombie collector waiting for pid 3288014
[2025-07-26 12:35:38] 2025-07-26 10:35:06,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:35:38] 2025-07-26 10:35:06,873 | INFO     | collected zombie processes
[2025-07-26 12:35:38] 2025-07-26 10:35:06,873 | INFO     | will attempt to kill all subprocesses of pid=3288014
[2025-07-26 12:35:38] 2025-07-26 10:35:06,914 | INFO     | process IDs to be killed: [3288014] (in reverse order)
[2025-07-26 12:35:38] 2025-07-26 10:35:06,936 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:35:38] 2025-07-26 10:35:06,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:35:38] 2025-07-26 10:35:06,938 | INFO     | did not find any defunct processes belonging to 3288014
[2025-07-26 12:35:38] 2025-07-26 10:35:06,939 | INFO     | did not find any defunct processes belonging to 3288014
[2025-07-26 12:35:38] 2025-07-26 10:35:06,939 | INFO     | ready for new job
[2025-07-26 12:35:38] 2025-07-26 10:35:06,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:35:38] 2025-07-26 10:35:06,940 | INFO     | ***************************************
[2025-07-26 12:35:38] 2025-07-26 10:35:06,940 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:35:38] 2025-07-26 10:35:06,940 | INFO     | ***************************************
[2025-07-26 12:35:38] 2025-07-26 10:35:06,940 | INFO     | 
[2025-07-26 12:35:38] 2025-07-26 10:35:06,940 | INFO     | architecture information:
[2025-07-26 12:35:38] 2025-07-26 10:35:06,940 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:35:38] 2025-07-26 10:35:06,948 | INFO     | cat /etc/os-release:
[2025-07-26 12:35:38] NAME="CentOS Linux"
[2025-07-26 12:35:38] VERSION="7 (Core)"
[2025-07-26 12:35:38] ID="centos"
[2025-07-26 12:35:38] ID_LIKE="rhel fedora"
[2025-07-26 12:35:38] VERSION_ID="7"
[2025-07-26 12:35:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:35:38] ANSI_COLOR="0;31"
[2025-07-26 12:35:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:35:38] HOME_URL="https://www.centos.org/"
[2025-07-26 12:35:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:35:38] 
[2025-07-26 12:35:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:35:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:35:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:35:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:35:38] 
[2025-07-26 12:35:38] 2025-07-26 10:35:06,948 | INFO     | ***************************************
[2025-07-26 12:35:38] 2025-07-26 10:35:07,451 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-26 12:35:38] 2025-07-26 10:35:07,464 | INFO     | sufficient remaining disk space (349192585216 B)
[2025-07-26 12:35:38] 2025-07-26 10:35:07,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:35:38] 2025-07-26 10:35:07,464 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:35:38] 2025-07-26 10:35:07,464 | INFO     | update_server=False
[2025-07-26 12:35:38] 2025-07-26 10:35:07,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:35:38] 2025-07-26 10:35:07,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:35:38] 2025-07-26 10:35:07,637 | INFO     | all payload control threads have been joined
[2025-07-26 12:35:38] 2025-07-26 10:35:07,771 | INFO     | all data control threads have been joined
[2025-07-26 12:35:38] 2025-07-26 10:35:08,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:35:38] 2025-07-26 10:35:08,068 | INFO     | aborting loop
[2025-07-26 12:35:38] 2025-07-26 10:35:08,427 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:35:38] 2025-07-26 10:35:08,470 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:08,470 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:08,478 | INFO     | all job control threads have been joined
[2025-07-26 12:35:38] 2025-07-26 10:35:08,524 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:08,595 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:08,643 | INFO     | [payload] control thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:08,777 | INFO     | [data] control thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:08,857 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:09,073 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:09,088 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:35:38] 2025-07-26 10:35:09,330 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:09,484 | INFO     | [job] control thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:09,525 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:09,828 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:09,887 | INFO     | [job] validate thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:10,434 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:13,095 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:18,387 | INFO     | job.realtimelogging is not enabled
[2025-07-26 12:35:38] 2025-07-26 10:35:19,393 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:35:38] 2025-07-26 10:35:20,715 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569830733632)>', '<ExcThread(monitor, started 140568894101248)>']
[2025-07-26 12:35:38] 2025-07-26 10:35:25,726 | INFO     | all workflow threads have been joined
[2025-07-26 12:35:38] 2025-07-26 10:35:25,726 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:35:38] 2025-07-26 10:35:25,727 | INFO     | traces error code: 0
[2025-07-26 12:35:38] 2025-07-26 10:35:25,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:35:38] 2025-07-26 10:35:38,172 | INFO     | PID=3281531 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:35:38] 2025-07-26 10:35:38,172 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:35:38] 2025-07-26 10:35:38,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:35:38] 2025-07-26 10:35:38,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:35:38] 2025-07-26 10:35:38,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:35:38] 2025-07-26 10:35:38,172 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 12:35:38] 2025-07-26 10:35:38,172 | INFO     | [monitor] control thread has ended
[2025-07-26 12:35:38] 2025-07-26 10:35:38,218 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:35:38] 2025-07-26 10:35:38,220 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:35:38] 2025-07-26 10:35:38,222 [wrapper] pilotpid: 3281531
[2025-07-26 12:35:38] 2025-07-26 10:35:38,224 [wrapper] Pilot exit status: 0
[2025-07-26 12:35:38] 2025-07-26 10:35:38,231 [wrapper] pandaids: 6745060336
[2025-07-26 12:35:38] 2025-07-26 10:35:38,246 [wrapper] cleanup supervisor_pilot 3300932 3281532
[2025-07-26 12:35:38] 2025-07-26 10:35:38,248 [wrapper] Test setup, not cleaning
[2025-07-26 12:35:38] 2025-07-26 10:35:38,250 [wrapper] apfmon messages muted
[2025-07-26 12:35:38] 2025-07-26 10:35:38,253 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:35:38] 2025-07-26 10:35:38,255 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:35:38]  *** Error codes and diagnostics ***
[2025-07-26 12:35:38]     "exeErrorCode": 0,
[2025-07-26 12:35:38]     "exeErrorDiag": "",
[2025-07-26 12:35:38]     "pilotErrorCode": 0,
[2025-07-26 12:35:38]     "pilotErrorDiag": "",
[2025-07-26 12:35:38]  *** Listing of results directory ***
[2025-07-26 12:35:38] total 439464
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc    530466 Jul 25 20:56 pilot3.tar.gz
[2025-07-26 12:35:38] -rwx------ 1 boinc boinc     36292 Jul 25 20:57 runpilot2-wrapper.sh
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc      5112 Jul 25 20:57 queuedata.json
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc       100 Jul 26 10:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:35:38] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 10:59 run_atlas
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc       105 Jul 26 10:59 job.xml
[2025-07-26 12:35:38] -rw-r--r-- 2 boinc boinc 228624355 Jul 26 10:59 EVNT.45743347._001436.pool.root.1
[2025-07-26 12:35:38] drwxrwx--x 2 boinc boinc      4096 Jul 26 10:59 shared
[2025-07-26 12:35:38] -rw-r--r-- 2 boinc boinc    542890 Jul 26 10:59 input.tar.gz
[2025-07-26 12:35:38] -rw-r--r-- 2 boinc boinc     15095 Jul 26 10:59 start_atlas.sh
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc         0 Jul 26 10:59 boinc_setup_complete
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc      6445 Jul 26 10:59 init_data.xml
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc         0 Jul 26 10:59 boinc_lockfile
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc      2562 Jul 26 10:59 pandaJob.out
[2025-07-26 12:35:38] -rw------- 1 boinc boinc    980133 Jul 26 10:59 agis_schedconf.cvmfs.json
[2025-07-26 12:35:38] -rw------- 1 boinc boinc   1593052 Jul 26 10:59 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:35:38] drwx------ 4 boinc boinc      4096 Jul 26 10:59 pilot3
[2025-07-26 12:35:38] -rw------- 1 boinc boinc 215962123 Jul 26 12:34 HITS.45743349._025527.pool.root.1
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc       529 Jul 26 12:34 boinc_task_state.xml
[2025-07-26 12:35:38] -rw------- 1 boinc boinc      1023 Jul 26 12:34 memory_monitor_summary.json
[2025-07-26 12:35:38] -rw------- 1 boinc boinc    222661 Jul 26 12:35 log.45743349._025527.job.log.tgz.1
[2025-07-26 12:35:38] -rw------- 1 boinc boinc      7766 Jul 26 12:35 heartbeat.json
[2025-07-26 12:35:38] -rw------- 1 boinc boinc        95 Jul 26 12:35 pilot_heartbeat.json
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc      8192 Jul 26 12:35 boinc_mmap_file
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc        27 Jul 26 12:35 wrapper_checkpoint.txt
[2025-07-26 12:35:38] -rw------- 1 boinc boinc       817 Jul 26 12:35 pilotlog.txt
[2025-07-26 12:35:38] -rw------- 1 boinc boinc    551149 Jul 26 12:35 log.45743349._025527.job.log.1
[2025-07-26 12:35:38] -rw------- 1 boinc boinc       357 Jul 26 12:35 output.list
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc       620 Jul 26 12:35 runtime_log
[2025-07-26 12:35:38] -rw------- 1 boinc boinc    788480 Jul 26 12:35 result.tar.gz
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc      8754 Jul 26 12:35 runtime_log.err
[2025-07-26 12:35:38] -rw------- 1 boinc boinc       663 Jul 26 12:35 gbcMDmbmcz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEQzKDm8UeOIm.diag
[2025-07-26 12:35:38] -rw-r--r-- 1 boinc boinc     21625 Jul 26 12:35 stderr.txt
[2025-07-26 12:35:38] HITS file was successfully produced:
[2025-07-26 12:35:38] -rw------- 1 boinc boinc 215962123 Jul 26 12:34 shared/HITS.pool.root.1
[2025-07-26 12:35:38]  *** Contents of shared directory: ***
[2025-07-26 12:35:38] total 435500
[2025-07-26 12:35:38] -rw-r--r-- 2 boinc boinc 228624355 Jul 26 10:59 ATLAS.root_0
[2025-07-26 12:35:38] -rw-r--r-- 2 boinc boinc    542890 Jul 26 10:59 input.tar.gz
[2025-07-26 12:35:38] -rw-r--r-- 2 boinc boinc     15095 Jul 26 10:59 start_atlas.sh
[2025-07-26 12:35:38] -rw------- 1 boinc boinc 215962123 Jul 26 12:34 HITS.pool.root.1
[2025-07-26 12:35:38] -rw------- 1 boinc boinc    788480 Jul 26 12:35 result.tar.gz
12:35:39 (3277894): run_atlas exited; CPU time 16567.010046
12:35:39 (3277894): called boinc_finish(0)

</stderr_txt>
]]>

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