Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
09:25:14 (2762542): wrapper (7.7.26015): starting
09:25:14 (2762542): wrapper: running run_atlas (--nthreads 6)
[2025-07-27 09:25:14] Arguments: --nthreads 6
[2025-07-27 09:25:14] Threads: 6
[2025-07-27 09:25:14] Checking for CVMFS
[2025-07-27 09:25:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 09:25:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 09:25:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 09:25:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 09:25:15] 2.12.7.0 1004224 6900 62480 148804 3 56 3594230 6144000 0 130560 0 4902001 99.989 254451 3567 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-07-27 09:25:15] CVMFS is ok
[2025-07-27 09:25:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 09:25:15] Checking for apptainer binary...
[2025-07-27 09:25:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 09:25:15] Running /usr/bin/apptainer --version
[2025-07-27 09:25:15] apptainer version 1.4.0
[2025-07-27 09:25:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 09:25:15] Beta
[2025-07-27 09:25:15] apptainer works
[2025-07-27 09:25:15] Set ATHENA_PROC_NUMBER=6
[2025-07-27 09:25:15] Set ATHENA_CORE_NUMBER=6
[2025-07-27 09:25:15] Starting ATLAS job with PandaID=6745057857
[2025-07-27 09:25:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 10:53:19]  *** The last 200 lines of the pilot log: ***
[2025-07-27 10:53:19]  protocol_id=None
[2025-07-27 10:53:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 10:53:19]  replicas=None
[2025-07-27 10:53:19]  scope=mc23_13p6TeV
[2025-07-27 10:53:19]  status=None
[2025-07-27 10:53:19]  status_code=0
[2025-07-27 10:53:19]  storage_token=
[2025-07-27 10:53:19]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745057857/log.45743349._023396.job.log.tgz.1
[2025-07-27 10:53:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/6a/log.45743349._023396.job.log.tgz.1
[2025-07-27 10:53:19]  workdir=None
[2025-07-27 10:53:19] ]
[2025-07-27 10:53:19] 2025-07-27 08:52:40,952 | INFO     | transferring file log.45743349._023396.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745057857/log.45743349._023396.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 10:53:19] 2025-07-27 08:52:40,953 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745057857/log.45743349._023396.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._023396.job
[2025-07-27 10:53:19] 2025-07-27 08:52:40,961 | INFO     | adding to output.list: log.45743349._023396.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/6a/log.45743349._023396.job.log.tg
[2025-07-27 10:53:19] 2025-07-27 08:52:40,961 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 10:53:19] 2025-07-27 08:52:40,961 | INFO     | summary of transferred files:
[2025-07-27 10:53:19] 2025-07-27 08:52:40,961 | INFO     |  -- lfn=log.45743349._023396.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 10:53:19] 2025-07-27 08:52:40,962 | INFO     | stage-out finished correctly
[2025-07-27 10:53:19] 2025-07-27 08:52:42,932 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 10:53:19] 2025-07-27 08:52:43,664 | INFO     | job 6745057857 has state=finished
[2025-07-27 10:53:19] 2025-07-27 08:52:43,666 | INFO     | preparing for final server update for job 6745057857 in state='finished'
[2025-07-27 10:53:19] 2025-07-27 08:52:43,668 | INFO     | this job has now completed (state=finished)
[2025-07-27 10:53:19] 2025-07-27 08:52:43,668 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 10:53:19] 2025-07-27 08:52:43,668 | INFO     | log transfer has been attempted: DONE
[2025-07-27 10:53:19] 2025-07-27 08:52:43,668 | INFO     | job 6745057857 has finished - writing final server update
[2025-07-27 10:53:19] 2025-07-27 08:52:43,669 | INFO     | total number of processed events: 400 (read)
[2025-07-27 10:53:19] 2025-07-27 08:52:43,672 | INFO     | executing command: lscpu
[2025-07-27 10:53:19] 2025-07-27 08:52:43,687 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 10:53:19] 2025-07-27 08:52:44,378 | WARNING  | process 2772634 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 10:53:19] 2025-07-27 08:52:44,379 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745057857/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 10:53:19] 2025-07-27 08:52:44,434 | INFO     | number of running child processes to parent process 2772634: 1
[2025-07-27 10:53:19] 2025-07-27 08:52:44,434 | INFO     | maximum number of monitored processes: 6
[2025-07-27 10:53:19] 2025-07-27 08:52:45,662 | INFO     | PID=2766172 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 10:53:19] 2025-07-27 08:52:46,936 | INFO     | monitor loop #402: job 0:6745057857 is in state 'finished'
[2025-07-27 10:53:19] 2025-07-27 08:52:46,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 10:53:19] 2025-07-27 08:52:47,359 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 10:53:19] 2025-07-27 08:52:47,360 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3700.380625
[2025-07-27 10:53:19] 2025-07-27 08:52:47,361 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745057857/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 10:53:19] 2025-07-27 08:52:47,361 | INFO     | extracted standard info from prmon json
[2025-07-27 10:53:19] 2025-07-27 08:52:47,361 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 10:53:19] 2025-07-27 08:52:47,361 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 10:53:19] 2025-07-27 08:52:47,361 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 10:53:19] 2025-07-27 08:52:47,361 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 10:53:19] 2025-07-27 08:52:47,362 | INFO     | fitting pss+swap vs Time
[2025-07-27 10:53:19] 2025-07-27 08:52:47,362 | INFO     | sum of square deviations: 152858680.0
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | sum of deviations: -9870073646.0
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | mean x: 1753603823.0
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | mean y: 2652249.6835443038
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | -- intersect: 113232721218.72835
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | intersect: 113232721218.72835
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | chi2: 0.044575664196877675
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | -- intersect: 113232721218.72835
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | current memory leak: -64.57 B/s (using 79 data points, chi2=0.04)
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | could have reported an average CPU frequency of 3700 MHz (6 samples)
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | ..............................
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | . Timing measurements:
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | . get job = 0 s
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | . initial setup = 1 s
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | . payload setup = 3 s
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | . stage-in = 0 s
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | . payload execution = 5220 s
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | . stage-out = 0 s
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | . log creation = 0 s
[2025-07-27 10:53:19] 2025-07-27 08:52:47,363 | INFO     | ..............................
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | 
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | job summary report
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | --------------------------------------------------
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | PanDA job id: 6745057857
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | task id: 45743349
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | errors: (none)
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | pilot state: finished 
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | transexitcode: 0
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | exeerrorcode: 0
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | exeerrordiag: 
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | exitcode: 0
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | exitmsg: OK
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | cpuconsumptiontime: 30159 s
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | nevents: 400
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | neventsw: 0
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | pid: 2772634
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | pgrp: 2772634
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | corecount: 6
[2025-07-27 10:53:19] 2025-07-27 08:52:47,400 | INFO     | event service: False
[2025-07-27 10:53:19] 2025-07-27 08:52:47,401 | INFO     | sizes: {0: 2397473, 2: 2397735, 10: 2397763, 5227: 2424322, 5229: 2433320, 5231: 2433376, 5235: 2433698}
[2025-07-27 10:53:19] 2025-07-27 08:52:47,401 | INFO     | --------------------------------------------------
[2025-07-27 10:53:19] 2025-07-27 08:52:47,401 | INFO     | 
[2025-07-27 10:53:19] 2025-07-27 08:52:47,401 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 10:53:19] 2025-07-27 08:52:47,410 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 10:53:19] 2025-07-27 08:52:47,411 | INFO     | job 6745057857 has completed (purged errors)
[2025-07-27 10:53:19] 2025-07-27 08:52:47,412 | INFO     | overall cleanup function is called
[2025-07-27 10:53:19] 2025-07-27 08:52:48,418 | INFO     | --- collectZombieJob: --- 10, [2772634]
[2025-07-27 10:53:19] 2025-07-27 08:52:48,419 | INFO     | zombie collector waiting for pid 2772634
[2025-07-27 10:53:19] 2025-07-27 08:52:48,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 10:53:19] 2025-07-27 08:52:48,419 | INFO     | collected zombie processes
[2025-07-27 10:53:19] 2025-07-27 08:52:48,419 | INFO     | will attempt to kill all subprocesses of pid=2772634
[2025-07-27 10:53:19] 2025-07-27 08:52:48,480 | INFO     | process IDs to be killed: [2772634] (in reverse order)
[2025-07-27 10:53:19] 2025-07-27 08:52:48,503 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 10:53:19] 2025-07-27 08:52:48,503 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 10:53:19] 2025-07-27 08:52:48,505 | INFO     | did not find any defunct processes belonging to 2772634
[2025-07-27 10:53:19] 2025-07-27 08:52:48,507 | INFO     | did not find any defunct processes belonging to 2772634
[2025-07-27 10:53:19] 2025-07-27 08:52:48,507 | INFO     | ready for new job
[2025-07-27 10:53:19] 2025-07-27 08:52:48,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 10:53:19] 2025-07-27 08:52:48,508 | INFO     | ***************************************
[2025-07-27 10:53:19] 2025-07-27 08:52:48,508 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 10:53:19] 2025-07-27 08:52:48,508 | INFO     | ***************************************
[2025-07-27 10:53:19] 2025-07-27 08:52:48,508 | INFO     | 
[2025-07-27 10:53:19] 2025-07-27 08:52:48,508 | INFO     | architecture information:
[2025-07-27 10:53:19] 2025-07-27 08:52:48,509 | INFO     | executing command: cat /etc/os-release
[2025-07-27 10:53:19] 2025-07-27 08:52:48,515 | INFO     | cat /etc/os-release:
[2025-07-27 10:53:19] NAME="CentOS Linux"
[2025-07-27 10:53:19] VERSION="7 (Core)"
[2025-07-27 10:53:19] ID="centos"
[2025-07-27 10:53:19] ID_LIKE="rhel fedora"
[2025-07-27 10:53:19] VERSION_ID="7"
[2025-07-27 10:53:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 10:53:19] ANSI_COLOR="0;31"
[2025-07-27 10:53:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 10:53:19] HOME_URL="https://www.centos.org/"
[2025-07-27 10:53:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 10:53:19] 
[2025-07-27 10:53:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 10:53:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 10:53:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 10:53:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 10:53:19] 
[2025-07-27 10:53:19] 2025-07-27 08:52:48,515 | INFO     | ***************************************
[2025-07-27 10:53:19] 2025-07-27 08:52:49,019 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 10:53:19] 2025-07-27 08:52:49,034 | INFO     | sufficient remaining disk space (267464474624 B)
[2025-07-27 10:53:19] 2025-07-27 08:52:49,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 10:53:19] 2025-07-27 08:52:49,034 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 10:53:19] 2025-07-27 08:52:49,034 | INFO     | update_server=False
[2025-07-27 10:53:19] 2025-07-27 08:52:49,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 10:53:19] 2025-07-27 08:52:49,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:53:19] 2025-07-27 08:52:49,035 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 10:53:19] 2025-07-27 08:52:49,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 10:53:19] 2025-07-27 08:52:49,440 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 10:53:19] 2025-07-27 08:52:49,441 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 10:53:19] 2025-07-27 08:52:49,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:53:19] 2025-07-27 08:52:49,441 | INFO     | will abort loop
[2025-07-27 10:53:19] 2025-07-27 08:52:49,644 | INFO     | all data control threads have been joined
[2025-07-27 10:53:19] 2025-07-27 08:52:49,745 | INFO     | all job control threads have been joined
[2025-07-27 10:53:19] 2025-07-27 08:52:50,037 | INFO     | [job] retrieve thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:50,041 | INFO     | [job] queue monitor thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:50,159 | INFO     | [data] copytool_in thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:50,207 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:50,379 | INFO     | [payload] validate_post thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:50,447 | INFO     | [job] job monitor thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:50,493 | INFO     | all payload control threads have been joined
[2025-07-27 10:53:19] 2025-07-27 08:52:50,650 | INFO     | [data] control thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:50,751 | INFO     | [payload] failed_post thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:50,751 | INFO     | [job] control thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:50,946 | INFO     | [job] validate thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:51,041 | INFO     | [data] copytool_out thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:51,164 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:51,239 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:51,336 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:51,499 | INFO     | [payload] control thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:53,042 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 10:53:19] 2025-07-27 08:52:54,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140449844926272)>', '<ExcThread(monitor, started 140449490646784)>']
[2025-07-27 10:53:19] 2025-07-27 08:52:59,096 | INFO     | all workflow threads have been joined
[2025-07-27 10:53:19] 2025-07-27 08:52:59,098 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 10:53:19] 2025-07-27 08:52:59,098 | INFO     | traces error code: 0
[2025-07-27 10:53:19] 2025-07-27 08:52:59,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 10:53:19] 2025-07-27 08:53:19,785 | INFO     | PID=2766172 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 10:53:19] 2025-07-27 08:53:19,786 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 10:53:19] 2025-07-27 08:53:19,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 10:53:19] 2025-07-27 08:53:19,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 10:53:19] 2025-07-27 08:53:19,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 10:53:19] 2025-07-27 08:53:19,786 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 10:53:19] 2025-07-27 08:53:19,786 | INFO     | [monitor] control thread has ended
[2025-07-27 10:53:19] 2025-07-27 08:53:19,848 [wrapper] ==== pilot stdout END ====
[2025-07-27 10:53:19] 2025-07-27 08:53:19,850 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 10:53:19] 2025-07-27 08:53:19,852 [wrapper] pilotpid: 2766172
[2025-07-27 10:53:19] 2025-07-27 08:53:19,854 [wrapper] Pilot exit status: 0
[2025-07-27 10:53:19] 2025-07-27 08:53:19,859 [wrapper] pandaids: 6745057857
[2025-07-27 10:53:19] 2025-07-27 08:53:19,874 [wrapper] cleanup supervisor_pilot 2784429 2766173
[2025-07-27 10:53:19] 2025-07-27 08:53:19,876 [wrapper] Test setup, not cleaning
[2025-07-27 10:53:19] 2025-07-27 08:53:19,877 [wrapper] apfmon messages muted
[2025-07-27 10:53:19] 2025-07-27 08:53:19,879 [wrapper] ==== wrapper stdout END ====
[2025-07-27 10:53:19] 2025-07-27 08:53:19,880 [wrapper] ==== wrapper stderr END ====
[2025-07-27 10:53:19]  *** Error codes and diagnostics ***
[2025-07-27 10:53:19]     "exeErrorCode": 0,
[2025-07-27 10:53:19]     "exeErrorDiag": "",
[2025-07-27 10:53:19]     "pilotErrorCode": 0,
[2025-07-27 10:53:19]     "pilotErrorDiag": "",
[2025-07-27 10:53:19]  *** Listing of results directory ***
[2025-07-27 10:53:19] insgesamt 354044
[2025-07-27 10:53:19] -rw-r--r-- 1 boinc boinc    530466 25. Jul 17:55 pilot3.tar.gz
[2025-07-27 10:53:19] -rwx------ 1 boinc boinc     36292 25. Jul 18:04 runpilot2-wrapper.sh
[2025-07-27 10:53:19] -rw-r--r-- 1 boinc boinc      5112 25. Jul 18:04 queuedata.json
[2025-07-27 10:53:19] -rw-r--r-- 1 boinc boinc       100 27. Jul 09:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 10:53:19] -rwxr-xr-x 1 boinc boinc      7986 27. Jul 09:25 run_atlas
[2025-07-27 10:53:19] -rw-r--r-- 1 boinc boinc       105 27. Jul 09:25 job.xml
[2025-07-27 10:53:19] -rw-r--r-- 1 boinc boinc      6722 27. Jul 09:25 init_data.xml
[2025-07-27 10:53:19] -rw-r--r-- 2 boinc boinc 145094207 27. Jul 09:25 EVNT.45743347._001320.pool.root.1
[2025-07-27 10:53:19] drwxrwx--x 2 boinc boinc      4096 27. Jul 09:25 shared
[2025-07-27 10:53:19] -rw-r--r-- 2 boinc boinc    542895 27. Jul 09:25 input.tar.gz
[2025-07-27 10:53:19] -rw-r--r-- 2 boinc boinc     15095 27. Jul 09:25 start_atlas.sh
[2025-07-27 10:53:19] -rw-r--r-- 1 boinc boinc         0 27. Jul 09:25 boinc_lockfile
[2025-07-27 10:53:19] -rw-r--r-- 1 boinc boinc      2562 27. Jul 09:25 pandaJob.out
[2025-07-27 10:53:19] -rw------- 1 boinc boinc    980125 27. Jul 09:25 agis_schedconf.cvmfs.json
[2025-07-27 10:53:19] -rw------- 1 boinc boinc   1593052 27. Jul 09:25 agis_ddmendpoints.agis.ALL.json
[2025-07-27 10:53:19] drwx------ 4 boinc boinc      4096 27. Jul 09:25 pilot3
[2025-07-27 10:53:19] -rw------- 1 boinc boinc 212011240 27. Jul 10:52 HITS.45743349._023396.pool.root.1
[2025-07-27 10:53:19] -rw-r--r-- 1 boinc boinc       529 27. Jul 10:52 boinc_task_state.xml
[2025-07-27 10:53:19] -rw------- 1 boinc boinc      1019 27. Jul 10:52 memory_monitor_summary.json
[2025-07-27 10:53:19] -rw------- 1 boinc boinc    276998 27. Jul 10:52 log.45743349._023396.job.log.tgz.1
[2025-07-27 10:53:19] -rw------- 1 boinc boinc      7747 27. Jul 10:52 heartbeat.json
[2025-07-27 10:53:19] -rw-r--r-- 1 boinc boinc        27 27. Jul 10:53 wrapper_checkpoint.txt
[2025-07-27 10:53:19] -rw-r--r-- 1 boinc boinc      8192 27. Jul 10:53 boinc_mmap_file
[2025-07-27 10:53:19] -rw------- 1 boinc boinc       817 27. Jul 10:53 pilotlog.txt
[2025-07-27 10:53:19] -rw------- 1 boinc boinc        95 27. Jul 10:53 pilot_heartbeat.json
[2025-07-27 10:53:19] -rw------- 1 boinc boinc    504325 27. Jul 10:53 log.45743349._023396.job.log.1
[2025-07-27 10:53:19] -rw------- 1 boinc boinc       357 27. Jul 10:53 output.list
[2025-07-27 10:53:19] -rw-r--r-- 1 boinc boinc       620 27. Jul 10:53 runtime_log
[2025-07-27 10:53:19] -rw------- 1 boinc boinc    798720 27. Jul 10:53 result.tar.gz
[2025-07-27 10:53:19] -rw-r--r-- 1 boinc boinc      8602 27. Jul 10:53 runtime_log.err
[2025-07-27 10:53:19] -rw------- 1 boinc boinc       639 27. Jul 10:53 2hQLDmv5Zz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmuBzKDmnL4hin.diag
[2025-07-27 10:53:19] -rw-r--r-- 1 boinc boinc     21579 27. Jul 10:53 stderr.txt
[2025-07-27 10:53:19] HITS file was successfully produced:
[2025-07-27 10:53:19] -rw------- 1 boinc boinc 212011240 27. Jul 10:52 shared/HITS.pool.root.1
[2025-07-27 10:53:19]  *** Contents of shared directory: ***
[2025-07-27 10:53:19] insgesamt 350072
[2025-07-27 10:53:19] -rw-r--r-- 2 boinc boinc 145094207 27. Jul 09:25 ATLAS.root_0
[2025-07-27 10:53:19] -rw-r--r-- 2 boinc boinc    542895 27. Jul 09:25 input.tar.gz
[2025-07-27 10:53:19] -rw-r--r-- 2 boinc boinc     15095 27. Jul 09:25 start_atlas.sh
[2025-07-27 10:53:19] -rw------- 1 boinc boinc 212011240 27. Jul 10:52 HITS.pool.root.1
[2025-07-27 10:53:19] -rw------- 1 boinc boinc    798720 27. Jul 10:53 result.tar.gz
10:53:21 (2762542): run_atlas exited; CPU time 30211.460400
10:53:21 (2762542): called boinc_finish(0)

</stderr_txt>
]]>

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