Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:55:22 (2248971): wrapper (7.7.26015): starting
11:55:22 (2248971): wrapper: running run_atlas (--nthreads 3)
[2025-07-26 11:55:22] Arguments: --nthreads 3
[2025-07-26 11:55:22] Threads: 3
[2025-07-26 11:55:22] Checking for CVMFS
[2025-07-26 11:55:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 11:55:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 11:55:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 11:55:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 11:55:23] 2.9.2.0 685657 6572 72168 148772 2 57 35688743 36864000 0 130560 0 4082959 99.987 246842 3338 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-26 11:55:23] CVMFS is ok
[2025-07-26 11:55:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 11:55:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 11:55:23] Further information can be found at the LHC@home message board.
[2025-07-26 11:55:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 11:55:23] Checking for apptainer binary...
[2025-07-26 11:55:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 11:55:23] Running /usr/bin/apptainer --version
[2025-07-26 11:55:23] apptainer version 1.4.1-1.1
[2025-07-26 11:55:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 11:55:23] thA333
[2025-07-26 11:55:23] apptainer works
[2025-07-26 11:55:23] Set ATHENA_PROC_NUMBER=3
[2025-07-26 11:55:23] Set ATHENA_CORE_NUMBER=3
[2025-07-26 11:55:23] Starting ATLAS job with PandaID=6745057673
[2025-07-26 11:55:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 13:39:34]  *** The last 200 lines of the pilot log: ***
[2025-07-26 13:39:34] 2025-07-26 11:39:20,958 | INFO     | mean x: 1753526840.5
[2025-07-26 13:39:34] 2025-07-26 11:39:20,958 | INFO     | mean y: 2333020.3529411764
[2025-07-26 13:39:34] 2025-07-26 11:39:20,958 | INFO     | -- intersect: -47385346130.53329
[2025-07-26 13:39:34] 2025-07-26 11:39:20,958 | INFO     | intersect: -47385346130.53329
[2025-07-26 13:39:34] 2025-07-26 11:39:20,958 | INFO     | chi2: 1.520397246673529
[2025-07-26 13:39:34] 2025-07-26 11:39:20,958 | INFO     | sum of square deviations: 282974608.0
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | sum of deviations: 8463430176.999998
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | mean x: 1753526688.0
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | mean y: 2331600.3092783503
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | -- intersect: -52443542580.013145
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | intersect: -52443542580.013145
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | chi2: 1.5242753729099356
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | current chi2=1.5242753729099356 (change=-0.2550732214815336 %)
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | right removable region: 96
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | sum of square deviations: 282974608.0
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | sum of deviations: -3695343644.0
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | mean x: 1753526993.0
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | mean y: 2373455.7216494847
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | -- intersect: 22901547604.113728
[2025-07-26 13:39:34] 2025-07-26 11:39:20,959 | INFO     | intersect: 22901547604.113728
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | chi2: 0.06682301326952546
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | current chi2=0.06682301326952546 (change=95.60489777157073 %)
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | sum of square deviations: 241429643.0
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | sum of deviations: 13031490.999999875
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | mean x: 1753527145.5
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | mean y: 2359813.6304347827
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | -- intersect: -92289181.95640258
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | intersect: -92289181.95640258
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | chi2: 0.018379545898433023
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | current chi2=0.018379545898433023 (change=72.49518541718474 %)
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | sum of square deviations: 204163828.0
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | sum of deviations: 428200297.0000002
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | mean x: 1753527298.0
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | mean y: 2358269.8620689656
[2025-07-26 13:39:34] 2025-07-26 11:39:20,960 | INFO     | -- intersect: -3675378953.017627
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | intersect: -3675378953.017627
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | chi2: 0.0027655381757976543
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | current chi2=0.0027655381757976543 (change=84.95317462640122 %)
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | sum of square deviations: 170944600.5
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | sum of deviations: 37360304.00000001
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | mean x: 1753527450.5
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | mean y: 2360066.6585365855
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | -- intersect: -380877066.4910709
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | intersect: -380877066.4910709
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | chi2: 0.0020802791760668976
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | current chi2=0.0020802791760668976 (change=24.77850444183834 %)
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | left removable region: 40
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | sum of square deviations: 54438230.0
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | sum of deviations: -419702204.00000006
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | mean x: 1753527877.5
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | mean y: 2363176.1428571427
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | -- intersect: 13521530036.678038
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | intersect: 13521530036.678038
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | chi2: 0.0006935992935489587
[2025-07-26 13:39:34] 2025-07-26 11:39:20,961 | INFO     | -- intersect: 13521530036.678038
[2025-07-26 13:39:34] 2025-07-26 11:39:20,962 | INFO     | current memory leak: -7.71 B/s (using 56 data points, chi2=0.00)
[2025-07-26 13:39:34] 2025-07-26 11:39:20,962 | INFO     | could have reported an average CPU frequency of 4267 MHz (7 samples)
[2025-07-26 13:39:34] 2025-07-26 11:39:20,962 | INFO     | ..............................
[2025-07-26 13:39:34] 2025-07-26 11:39:20,962 | INFO     | . Timing measurements:
[2025-07-26 13:39:34] 2025-07-26 11:39:20,962 | INFO     | . get job = 0 s
[2025-07-26 13:39:34] 2025-07-26 11:39:20,962 | INFO     | . initial setup = 1 s
[2025-07-26 13:39:34] 2025-07-26 11:39:20,962 | INFO     | . payload setup = 6 s
[2025-07-26 13:39:34] 2025-07-26 11:39:20,962 | INFO     | . stage-in = 0 s
[2025-07-26 13:39:34] 2025-07-26 11:39:20,962 | INFO     | . payload execution = 6185 s
[2025-07-26 13:39:34] 2025-07-26 11:39:20,962 | INFO     | . stage-out = 0 s
[2025-07-26 13:39:34] 2025-07-26 11:39:20,962 | INFO     | . log creation = 0 s
[2025-07-26 13:39:34] 2025-07-26 11:39:20,962 | INFO     | ..............................
[2025-07-26 13:39:34] 2025-07-26 11:39:20,993 | INFO     | 
[2025-07-26 13:39:34] 2025-07-26 11:39:20,993 | INFO     | job summary report
[2025-07-26 13:39:34] 2025-07-26 11:39:20,993 | INFO     | --------------------------------------------------
[2025-07-26 13:39:34] 2025-07-26 11:39:20,993 | INFO     | PanDA job id: 6745057673
[2025-07-26 13:39:34] 2025-07-26 11:39:20,993 | INFO     | task id: 45743349
[2025-07-26 13:39:34] 2025-07-26 11:39:20,993 | INFO     | errors: (none)
[2025-07-26 13:39:34] 2025-07-26 11:39:20,993 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 13:39:34] 2025-07-26 11:39:20,993 | INFO     | pilot state: finished 
[2025-07-26 13:39:34] 2025-07-26 11:39:20,993 | INFO     | transexitcode: 0
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | exeerrorcode: 0
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | exeerrordiag: 
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | exitcode: 0
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | exitmsg: OK
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | cpuconsumptiontime: 17904 s
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | nevents: 400
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | neventsw: 0
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | pid: 2259151
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | pgrp: 2259151
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | corecount: 3
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | event service: False
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 6195: 2424875, 6196: 2433879, 6199: 2434063, 6210: 2434257}
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | --------------------------------------------------
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | 
[2025-07-26 13:39:34] 2025-07-26 11:39:20,994 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,006 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 13:39:34] 2025-07-26 11:39:21,007 | INFO     | job 6745057673 has completed (purged errors)
[2025-07-26 13:39:34] 2025-07-26 11:39:21,007 | INFO     | overall cleanup function is called
[2025-07-26 13:39:34] 2025-07-26 11:39:22,013 | INFO     | --- collectZombieJob: --- 10, [2259151]
[2025-07-26 13:39:34] 2025-07-26 11:39:22,013 | INFO     | zombie collector waiting for pid 2259151
[2025-07-26 13:39:34] 2025-07-26 11:39:22,013 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 13:39:34] 2025-07-26 11:39:22,014 | INFO     | collected zombie processes
[2025-07-26 13:39:34] 2025-07-26 11:39:22,014 | INFO     | will attempt to kill all subprocesses of pid=2259151
[2025-07-26 13:39:34] 2025-07-26 11:39:22,052 | INFO     | process IDs to be killed: [2259151] (in reverse order)
[2025-07-26 13:39:34] 2025-07-26 11:39:22,076 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 13:39:34] 2025-07-26 11:39:22,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 13:39:34] 2025-07-26 11:39:22,077 | INFO     | did not find any defunct processes belonging to 2259151
[2025-07-26 13:39:34] 2025-07-26 11:39:22,078 | INFO     | did not find any defunct processes belonging to 2259151
[2025-07-26 13:39:34] 2025-07-26 11:39:22,078 | INFO     | ready for new job
[2025-07-26 13:39:34] 2025-07-26 11:39:22,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 13:39:34] 2025-07-26 11:39:22,079 | INFO     | ***************************************
[2025-07-26 13:39:34] 2025-07-26 11:39:22,079 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 13:39:34] 2025-07-26 11:39:22,079 | INFO     | ***************************************
[2025-07-26 13:39:34] 2025-07-26 11:39:22,079 | INFO     | 
[2025-07-26 13:39:34] 2025-07-26 11:39:22,080 | INFO     | architecture information:
[2025-07-26 13:39:34] 2025-07-26 11:39:22,080 | INFO     | executing command: cat /etc/os-release
[2025-07-26 13:39:34] 2025-07-26 11:39:22,089 | INFO     | cat /etc/os-release:
[2025-07-26 13:39:34] NAME="CentOS Linux"
[2025-07-26 13:39:34] VERSION="7 (Core)"
[2025-07-26 13:39:34] ID="centos"
[2025-07-26 13:39:34] ID_LIKE="rhel fedora"
[2025-07-26 13:39:34] VERSION_ID="7"
[2025-07-26 13:39:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 13:39:34] ANSI_COLOR="0;31"
[2025-07-26 13:39:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 13:39:34] HOME_URL="https://www.centos.org/"
[2025-07-26 13:39:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 13:39:34] 
[2025-07-26 13:39:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 13:39:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 13:39:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 13:39:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 13:39:34] 
[2025-07-26 13:39:34] 2025-07-26 11:39:22,089 | INFO     | ***************************************
[2025-07-26 13:39:34] 2025-07-26 11:39:22,593 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-26 13:39:34] 2025-07-26 11:39:22,606 | INFO     | sufficient remaining disk space (219548745728 B)
[2025-07-26 13:39:34] 2025-07-26 11:39:22,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 13:39:34] 2025-07-26 11:39:22,606 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 13:39:34] 2025-07-26 11:39:22,606 | INFO     | update_server=False
[2025-07-26 13:39:34] 2025-07-26 11:39:22,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 13:39:34] 2025-07-26 11:39:22,606 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:39:34] 2025-07-26 11:39:22,606 | INFO     | aborting loop
[2025-07-26 13:39:34] 2025-07-26 11:39:22,606 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:39:34] 2025-07-26 11:39:22,606 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 13:39:34] 2025-07-26 11:39:22,606 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 13:39:34] 2025-07-26 11:39:22,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 13:39:34] 2025-07-26 11:39:22,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 13:39:34] 2025-07-26 11:39:22,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 13:39:34] 2025-07-26 11:39:22,703 | INFO     | all payload control threads have been joined
[2025-07-26 13:39:34] 2025-07-26 11:39:23,367 | INFO     | all job control threads have been joined
[2025-07-26 13:39:34] 2025-07-26 11:39:23,453 | INFO     | all data control threads have been joined
[2025-07-26 13:39:34] 2025-07-26 11:39:23,611 | INFO     | [job] retrieve thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:23,612 | INFO     | [job] queue monitor thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:23,612 | INFO     | [job] job monitor thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:23,709 | INFO     | [payload] control thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:24,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:24,373 | INFO     | [job] control thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:24,393 | INFO     | [payload] failed_post thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:24,459 | INFO     | [data] control thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:24,502 | INFO     | [data] copytool_in thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:24,580 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:24,675 | INFO     | [data] copytool_out thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:24,748 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:24,775 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:24,917 | INFO     | [payload] validate_post thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:24,972 | INFO     | [job] validate thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:25,291 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 13:39:34] 2025-07-26 11:39:29,298 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 13:39:34] 2025-07-26 11:39:29,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140522826164032)>', '<ExcThread(monitor, started 140522169546496)>']
[2025-07-26 13:39:34] 2025-07-26 11:39:30,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 13:39:34] 2025-07-26 11:39:30,650 | INFO     | [monitor] control thread has ended
[2025-07-26 13:39:34] 2025-07-26 11:39:34,814 | INFO     | all workflow threads have been joined
[2025-07-26 13:39:34] 2025-07-26 11:39:34,814 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 13:39:34] 2025-07-26 11:39:34,815 | INFO     | traces error code: 0
[2025-07-26 13:39:34] 2025-07-26 11:39:34,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 13:39:34] 2025-07-26 11:39:34,862 [wrapper] ==== pilot stdout END ====
[2025-07-26 13:39:34] 2025-07-26 11:39:34,865 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 13:39:34] 2025-07-26 11:39:34,868 [wrapper] pilotpid: 2252624
[2025-07-26 13:39:34] 2025-07-26 11:39:34,870 [wrapper] Pilot exit status: 0
[2025-07-26 13:39:34] 2025-07-26 11:39:34,878 [wrapper] pandaids: 6745057673
[2025-07-26 13:39:34] 2025-07-26 11:39:34,894 [wrapper] cleanup supervisor_pilot 2271534 2252625
[2025-07-26 13:39:34] 2025-07-26 11:39:34,897 [wrapper] Test setup, not cleaning
[2025-07-26 13:39:34] 2025-07-26 11:39:34,900 [wrapper] apfmon messages muted
[2025-07-26 13:39:34] 2025-07-26 11:39:34,903 [wrapper] ==== wrapper stdout END ====
[2025-07-26 13:39:34] 2025-07-26 11:39:34,906 [wrapper] ==== wrapper stderr END ====
[2025-07-26 13:39:34]  *** Error codes and diagnostics ***
[2025-07-26 13:39:34]     "exeErrorCode": 0,
[2025-07-26 13:39:34]     "exeErrorDiag": "",
[2025-07-26 13:39:34]     "pilotErrorCode": 0,
[2025-07-26 13:39:34]     "pilotErrorDiag": "",
[2025-07-26 13:39:34]  *** Listing of results directory ***
[2025-07-26 13:39:34] total 351944
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc    530466 Jul 25 17:27 pilot3.tar.gz
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc      5112 Jul 25 17:39 queuedata.json
[2025-07-26 13:39:34] -rwx------ 1 boinc boinc     36292 Jul 25 17:42 runpilot2-wrapper.sh
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc       100 Jul 26 11:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 13:39:34] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 11:55 run_atlas
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc       105 Jul 26 11:55 job.xml
[2025-07-26 13:39:34] -rw-r--r-- 2 boinc boinc 143953262 Jul 26 11:55 EVNT.45743347._001309.pool.root.1
[2025-07-26 13:39:34] -rw-r--r-- 2 boinc boinc    542893 Jul 26 11:55 input.tar.gz
[2025-07-26 13:39:34] -rw-r--r-- 2 boinc boinc     15095 Jul 26 11:55 start_atlas.sh
[2025-07-26 13:39:34] drwxrwx--x 2 boinc boinc      4096 Jul 26 11:55 shared
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc         0 Jul 26 11:55 boinc_setup_complete
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc      6199 Jul 26 11:55 init_data.xml
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc         0 Jul 26 11:55 boinc_lockfile
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc      2561 Jul 26 11:55 pandaJob.out
[2025-07-26 13:39:34] -rw------- 1 boinc boinc    980133 Jul 26 11:55 agis_schedconf.cvmfs.json
[2025-07-26 13:39:34] -rw------- 1 boinc boinc   1593052 Jul 26 11:55 agis_ddmendpoints.agis.ALL.json
[2025-07-26 13:39:34] drwx------ 4 boinc boinc      4096 Jul 26 11:55 pilot3
[2025-07-26 13:39:34] -rw------- 1 boinc boinc 210893913 Jul 26 13:38 HITS.45743349._023217.pool.root.1
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc       529 Jul 26 13:38 boinc_task_state.xml
[2025-07-26 13:39:34] -rw------- 1 boinc boinc      1018 Jul 26 13:39 memory_monitor_summary.json
[2025-07-26 13:39:34] -rw------- 1 boinc boinc        95 Jul 26 13:39 pilot_heartbeat.json
[2025-07-26 13:39:34] -rw------- 1 boinc boinc    232927 Jul 26 13:39 log.45743349._023217.job.log.tgz.1
[2025-07-26 13:39:34] -rw------- 1 boinc boinc      7752 Jul 26 13:39 heartbeat.json
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc      8192 Jul 26 13:39 boinc_mmap_file
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc        27 Jul 26 13:39 wrapper_checkpoint.txt
[2025-07-26 13:39:34] -rw------- 1 boinc boinc      4484 Jul 26 13:39 pilotlog.txt
[2025-07-26 13:39:34] -rw------- 1 boinc boinc    598192 Jul 26 13:39 log.45743349._023217.job.log.1
[2025-07-26 13:39:34] -rw------- 1 boinc boinc       357 Jul 26 13:39 output.list
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc       620 Jul 26 13:39 runtime_log
[2025-07-26 13:39:34] -rw------- 1 boinc boinc    849920 Jul 26 13:39 result.tar.gz
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc      8734 Jul 26 13:39 runtime_log.err
[2025-07-26 13:39:34] -rw------- 1 boinc boinc       659 Jul 26 13:39 r0MMDmHkZz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVsPLDmqFWtIo.diag
[2025-07-26 13:39:34] -rw-r--r-- 1 boinc boinc     20794 Jul 26 13:39 stderr.txt
[2025-07-26 13:39:34] HITS file was successfully produced:
[2025-07-26 13:39:34] -rw------- 1 boinc boinc 210893913 Jul 26 13:38 shared/HITS.pool.root.1
[2025-07-26 13:39:34]  *** Contents of shared directory: ***
[2025-07-26 13:39:34] total 347920
[2025-07-26 13:39:34] -rw-r--r-- 2 boinc boinc 143953262 Jul 26 11:55 ATLAS.root_0
[2025-07-26 13:39:34] -rw-r--r-- 2 boinc boinc    542893 Jul 26 11:55 input.tar.gz
[2025-07-26 13:39:34] -rw-r--r-- 2 boinc boinc     15095 Jul 26 11:55 start_atlas.sh
[2025-07-26 13:39:34] -rw------- 1 boinc boinc 210893913 Jul 26 13:38 HITS.pool.root.1
[2025-07-26 13:39:34] -rw------- 1 boinc boinc    849920 Jul 26 13:39 result.tar.gz
13:39:36 (2248971): run_atlas exited; CPU time 17934.473218
13:39:36 (2248971): called boinc_finish(0)

</stderr_txt>
]]>

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