Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:18:07 (1175194): wrapper (7.7.26015): starting
14:18:07 (1175194): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 14:18:07] Arguments: --nthreads 12
[2025-07-25 14:18:07] Threads: 12
[2025-07-25 14:18:07] Checking for CVMFS
[2025-07-25 14:18:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 14:18:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 14:18:08] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 14:18:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 14:18:09] 2.11.5.0 11002 23012 211924 148752 1 381 29699726 45568000 18587 130560 0 167166000 99.714 149781106 25161 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-25 14:18:09] CVMFS is ok
[2025-07-25 14:18:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 14:18:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 14:18:09] Further information can be found at the LHC@home message board.
[2025-07-25 14:18:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 14:18:09] Checking for apptainer binary...
[2025-07-25 14:18:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 14:18:09] Running /usr/bin/apptainer --version
[2025-07-25 14:18:09] apptainer version 1.4.1-1.el9
[2025-07-25 14:18:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 14:18:10] wns0041.triumf.lcg
[2025-07-25 14:18:10] apptainer works
[2025-07-25 14:18:10] Set ATHENA_PROC_NUMBER=12
[2025-07-25 14:18:10] Set ATHENA_CORE_NUMBER=12
[2025-07-25 14:18:10] Starting ATLAS job with PandaID=6745060253
[2025-07-25 14:18:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 14:23:31]  *** The last 200 lines of the pilot log: ***
[2025-07-25 14:23:31] 2025-07-25 21:22:56,901 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 14:23:31] 2025-07-25 21:22:56,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 14:23:31] 2025-07-25 21:22:56,920 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 14:23:31] 2025-07-25 21:22:56,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | WARNING  | wrong length of table data, x=[1753478414.0], y=[1972.0] (must be same and length>=4)
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | could have reported an average CPU frequency of 2517 MHz (4 samples)
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | ..............................
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . Timing measurements:
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . get job = 0 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . initial setup = 3 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . payload setup = 21 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . stage-in = 0 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . payload execution = 46 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . stage-out = 1 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . log creation = 0 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | ..............................
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 14:23:31] 2025-07-25 21:22:56,922 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745060253/pilotlog.txt
[2025-07-25 14:23:31] 2025-07-25 21:22:57,058 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 14:23:31] - Log from pilotlog.txt -
[2025-07-25 14:23:31] 2025-07-25 21:22:56,901 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745060253/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 14:23:31] 2025-07-25 21:22:56,901 | INFO     | extracted standard info from prmon json
[2025-07-25 14:23:31] 2025-07-25 21:22:56,901 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 14:23:31] 2025-07-25 21:22:56,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 14:23:31] 2025-07-25 21:22:56,920 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 14:23:31] 2025-07-25 21:22:56,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | WARNING  | wrong length of table data, x=[1753478414.0], y=[1972.0] (must be same and length>=4)
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | could have reported an average CPU frequency of 2517 MHz (4 samples)
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | ..............................
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . Timing measurements:
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . get job = 0 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . initial setup = 3 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . payload setup = 21 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . stage-in = 0 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . payload execution = 46 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . stage-out = 1 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . log creation = 0 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | ..............................
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 14:23:31] 2025-07-25 21:22:56,922 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745060253/pilotlog.txt
[2025-07-25 14:23:31] 2025-07-25 21:22:57,058 | WARNING  | 
[2025-07-25 14:23:31] [begin log extracts]
[2025-07-25 14:23:31] - Log from pilotlog.txt -
[2025-07-25 14:23:31] 2025-07-25 21:22:56,901 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745060253/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 14:23:31] 2025-07-25 21:22:56,901 | INFO     | extracted standard info from prmon json
[2025-07-25 14:23:31] 2025-07-25 21:22:56,901 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 14:23:31] 2025-07-25 21:22:56,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 14:23:31] 2025-07-25 21:22:56,920 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 14:23:31] 2025-07-25 21:22:56,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | WARNING  | wrong length of table data, x=[1753478414.0], y=[1972.0] (must be same and length>=4)
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | could have reported an average CPU frequency of 2517 MHz (4 samples)
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | ..............................
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . Timing measurements:
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . get job = 0 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . initial setup = 3 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . payload setup = 21 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . stage-in = 0 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . payload execution = 46 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . stage-out = 1 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | . log creation = 0 s
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | ..............................
[2025-07-25 14:23:31] 2025-07-25 21:22:56,921 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 14:23:31] 2025-07-25 21:22:56,922 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745060253/pilotlog.txt
[2025-07-25 14:23:31] [end log extracts]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,058 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 14:23:31] 2025-07-25 21:22:57,059 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 14:23:31] 2025-07-25 21:22:57,859 | INFO     | 
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | job summary report
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | --------------------------------------------------
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | PanDA job id: 6745060253
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | task id: 45743349
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 14:20:33,305 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | pilot state: failed 
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | transexitcode: 65
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | exeerrorcode: 65
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | exitcode: 65
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | cpuconsumptiontime: 17 s
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | nevents: 0
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | neventsw: 0
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | pid: 1185123
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | pgrp: 1185123
[2025-07-25 14:23:31] 2025-07-25 21:22:57,860 | INFO     | corecount: 12
[2025-07-25 14:23:31] 2025-07-25 21:22:57,861 | INFO     | event service: False
[2025-07-25 14:23:31] 2025-07-25 21:22:57,861 | INFO     | sizes: {0: 2397421, 1: 2397421, 12: 2397449, 16: 2397739, 23: 2397767, 72: 2421130, 73: 2425422, 75: 2425450, 207: 2425616}
[2025-07-25 14:23:31] 2025-07-25 21:22:57,861 | INFO     | --------------------------------------------------
[2025-07-25 14:23:31] 2025-07-25 21:22:57,861 | INFO     | 
[2025-07-25 14:23:31] 2025-07-25 21:22:57,861 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 14:23:31] 2025-07-25 21:22:57,974 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,975 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 14:23:31] 2025-07-25 21:22:57,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 14:23:31] 2025-07-25 21:22:57,976 | INFO     | job 6745060253 has completed (purged errors)
[2025-07-25 14:23:31] 2025-07-25 21:22:57,976 | INFO     | overall cleanup function is called
[2025-07-25 14:23:31] 2025-07-25 21:22:58,982 | INFO     | --- collectZombieJob: --- 10, [1185123]
[2025-07-25 14:23:31] 2025-07-25 21:22:58,983 | INFO     | zombie collector waiting for pid 1185123
[2025-07-25 14:23:31] 2025-07-25 21:22:58,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 14:23:31] 2025-07-25 21:22:58,983 | INFO     | collected zombie processes
[2025-07-25 14:23:31] 2025-07-25 21:22:58,983 | INFO     | will attempt to kill all subprocesses of pid=1185123
[2025-07-25 14:23:31] 2025-07-25 21:22:59,658 | INFO     | process IDs to be killed: [1185123] (in reverse order)
[2025-07-25 14:23:31] 2025-07-25 21:22:59,745 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 14:23:31] 2025-07-25 21:22:59,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 14:23:31] 2025-07-25 21:22:59,758 | INFO     | did not find any defunct processes belonging to 1185123
[2025-07-25 14:23:31] 2025-07-25 21:22:59,768 | INFO     | did not find any defunct processes belonging to 1185123
[2025-07-25 14:23:31] 2025-07-25 21:22:59,768 | INFO     | ready for new job
[2025-07-25 14:23:31] 2025-07-25 21:22:59,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 14:23:31] 2025-07-25 21:22:59,769 | INFO     | ***************************************
[2025-07-25 14:23:31] 2025-07-25 21:22:59,769 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 14:23:31] 2025-07-25 21:22:59,769 | INFO     | ***************************************
[2025-07-25 14:23:31] 2025-07-25 21:22:59,769 | INFO     | 
[2025-07-25 14:23:31] 2025-07-25 21:22:59,771 | INFO     | architecture information:
[2025-07-25 14:23:31] 2025-07-25 21:22:59,772 | INFO     | executing command: cat /etc/os-release
[2025-07-25 14:23:31] 2025-07-25 21:22:59,787 | INFO     | cat /etc/os-release:
[2025-07-25 14:23:31] NAME="CentOS Linux"
[2025-07-25 14:23:31] VERSION="7 (Core)"
[2025-07-25 14:23:31] ID="centos"
[2025-07-25 14:23:31] ID_LIKE="rhel fedora"
[2025-07-25 14:23:31] VERSION_ID="7"
[2025-07-25 14:23:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 14:23:31] ANSI_COLOR="0;31"
[2025-07-25 14:23:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 14:23:31] HOME_URL="https://www.centos.org/"
[2025-07-25 14:23:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 14:23:31] 
[2025-07-25 14:23:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 14:23:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 14:23:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 14:23:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 14:23:31] 
[2025-07-25 14:23:31] 2025-07-25 21:22:59,787 | INFO     | ***************************************
[2025-07-25 14:23:31] 2025-07-25 21:23:00,291 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 14:23:31] 2025-07-25 21:23:00,353 | INFO     | sufficient remaining disk space (1773629603840 B)
[2025-07-25 14:23:31] 2025-07-25 21:23:00,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 14:23:31] 2025-07-25 21:23:00,353 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 14:23:31] 2025-07-25 21:23:00,353 | INFO     | update_server=False
[2025-07-25 14:23:31] 2025-07-25 21:23:00,353 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 14:23:31] 2025-07-25 21:23:00,367 | INFO     | all payload control threads have been joined
[2025-07-25 14:23:31] 2025-07-25 21:23:00,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 14:23:31] 2025-07-25 21:23:00,378 | INFO     | aborting loop
[2025-07-25 14:23:31] 2025-07-25 21:23:01,269 | INFO     | all data control threads have been joined
[2025-07-25 14:23:31] 2025-07-25 21:23:01,311 | INFO     | all job control threads have been joined
[2025-07-25 14:23:31] 2025-07-25 21:23:01,359 | INFO     | [job] retrieve thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:01,373 | INFO     | [payload] control thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:01,384 | INFO     | [job] job monitor thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:01,398 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:01,501 | INFO     | [job] validate thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:01,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 14:23:31] 2025-07-25 21:23:01,728 | INFO     | [payload] validate_post thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:02,017 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:02,039 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:02,130 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:02,134 | INFO     | [data] copytool_in thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:02,213 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 14:23:31] 2025-07-25 21:23:02,275 | INFO     | [data] control thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:02,317 | INFO     | [job] control thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:02,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 14:23:31] 2025-07-25 21:23:02,910 | INFO     | [payload] failed_post thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:03,414 | INFO     | [job] queue monitor thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:03,550 | INFO     | [data] copytool_out thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:06,241 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 14:23:31] 2025-07-25 21:23:07,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139620825327424)>', '<ExcThread(monitor, started 139620436133632)>']
[2025-07-25 14:23:31] 2025-07-25 21:23:12,638 | INFO     | all workflow threads have been joined
[2025-07-25 14:23:31] 2025-07-25 21:23:12,639 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 14:23:31] 2025-07-25 21:23:12,639 | INFO     | traces error code: 0
[2025-07-25 14:23:31] 2025-07-25 21:23:12,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 14:23:31] 2025-07-25 21:23:30,799 | INFO     | PID=1178784 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 14:23:31] 2025-07-25 21:23:30,799 | INFO     | .. there are 41 such processes running
[2025-07-25 14:23:31] 2025-07-25 21:23:30,799 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 14:23:31] 2025-07-25 21:23:30,800 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 14:23:31] 2025-07-25 21:23:30,800 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 14:23:31] 2025-07-25 21:23:30,800 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 14:23:31] 2025-07-25 21:23:30,800 | INFO     | [monitor] control thread has ended
[2025-07-25 14:23:31] 2025-07-25 21:23:30,990 [wrapper] ==== pilot stdout END ====
[2025-07-25 14:23:31] 2025-07-25 21:23:31,000 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 14:23:31] 2025-07-25 21:23:31,017 [wrapper] pilotpid: 1178784
[2025-07-25 14:23:31] 2025-07-25 21:23:31,029 [wrapper] Pilot exit status: 0
[2025-07-25 14:23:31] 2025-07-25 21:23:31,121 [wrapper] pandaids: 6745060253
[2025-07-25 14:23:31] 2025-07-25 21:23:31,174 [wrapper] cleanup supervisor_pilot 1178790 1178785
[2025-07-25 14:23:31] 2025-07-25 21:23:31,176 [wrapper] Test setup, not cleaning
[2025-07-25 14:23:31] 2025-07-25 21:23:31,178 [wrapper] apfmon messages muted
[2025-07-25 14:23:31] 2025-07-25 21:23:31,180 [wrapper] ==== wrapper stdout END ====
[2025-07-25 14:23:31] 2025-07-25 21:23:31,182 [wrapper] ==== wrapper stderr END ====
[2025-07-25 14:23:31]  *** Error codes and diagnostics ***
[2025-07-25 14:23:31]     "exeErrorCode": 65,
[2025-07-25 14:23:31]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 14:23:31]     "pilotErrorCode": 1305,
[2025-07-25 14:23:31]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 14:23:31]  *** Listing of results directory ***
[2025-07-25 14:23:31] total 227060
[2025-07-25 14:23:31] -rw-r--r--. 1 boinc boinc    530466 Jul 25 11:32 pilot3.tar.gz
[2025-07-25 14:23:31] -rwx------. 1 boinc boinc     36292 Jul 25 11:51 runpilot2-wrapper.sh
[2025-07-25 14:23:31] -rw-r--r--. 1 boinc boinc      5112 Jul 25 11:51 queuedata.json
[2025-07-25 14:23:31] -rw-r--r--. 1 boinc boinc       100 Jul 25 14:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 14:23:31] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 14:18 run_atlas
[2025-07-25 14:23:31] -rw-r--r--. 1 boinc boinc       105 Jul 25 14:18 job.xml
[2025-07-25 14:23:31] -rw-r--r--. 1 boinc boinc      6596 Jul 25 14:18 init_data.xml
[2025-07-25 14:23:31] -rw-r--r--. 2 boinc boinc 228427642 Jul 25 14:18 EVNT.45743347._001432.pool.root.1
[2025-07-25 14:23:31] -rw-r--r--. 2 boinc boinc     15095 Jul 25 14:18 start_atlas.sh
[2025-07-25 14:23:31] drwxrwx--x. 2 boinc boinc      4096 Jul 25 14:18 shared
[2025-07-25 14:23:31] -rw-r--r--. 2 boinc boinc    542884 Jul 25 14:18 input.tar.gz
[2025-07-25 14:23:31] -rw-r--r--. 1 boinc boinc         0 Jul 25 14:18 boinc_lockfile
[2025-07-25 14:23:31] -rw-r--r--. 1 boinc boinc      2562 Jul 25 14:18 pandaJob.out
[2025-07-25 14:23:31] -rw-------. 1 boinc boinc    979993 Jul 25 14:18 agis_schedconf.cvmfs.json
[2025-07-25 14:23:31] -rw-------. 1 boinc boinc   1593052 Jul 25 14:18 agis_ddmendpoints.agis.ALL.json
[2025-07-25 14:23:31] drwx------. 4 boinc boinc      4096 Jul 25 14:18 pilot3
[2025-07-25 14:23:31] -rw-r--r--. 1 boinc boinc       524 Jul 25 14:20 boinc_task_state.xml
[2025-07-25 14:23:31] -rw-------. 1 boinc boinc       953 Jul 25 14:20 memory_monitor_summary.json
[2025-07-25 14:23:31] -rw-------. 1 boinc boinc     20728 Jul 25 14:20 log.45743349._025444.job.log.tgz.1
[2025-07-25 14:23:31] -rw-------. 1 boinc boinc        95 Jul 25 14:22 pilot_heartbeat.json
[2025-07-25 14:23:31] -rw-------. 1 boinc boinc      8397 Jul 25 14:22 heartbeat.json
[2025-07-25 14:23:31] -rw-r--r--. 1 boinc boinc      8192 Jul 25 14:23 boinc_mmap_file
[2025-07-25 14:23:31] -rw-r--r--. 1 boinc boinc        22 Jul 25 14:23 wrapper_checkpoint.txt
[2025-07-25 14:23:31] -rw-------. 1 boinc boinc       823 Jul 25 14:23 pilotlog.txt
[2025-07-25 14:23:31] -rw-------. 1 boinc boinc     80129 Jul 25 14:23 log.45743349._025444.job.log.1
[2025-07-25 14:23:31] -rw-------. 1 boinc boinc       188 Jul 25 14:23 output.list
[2025-07-25 14:23:31] -rw-r--r--. 1 boinc boinc       620 Jul 25 14:23 runtime_log
[2025-07-25 14:23:31] -rw-------. 1 boinc boinc    122880 Jul 25 14:23 result.tar.gz
[2025-07-25 14:23:31] -rw-r--r--. 1 boinc boinc      8485 Jul 25 14:23 runtime_log.err
[2025-07-25 14:23:31] -rw-------. 1 boinc boinc       646 Jul 25 14:23 4zfMDm6gcz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnDQLDmurRENn.diag
[2025-07-25 14:23:31] -rw-r--r--. 1 boinc boinc     21818 Jul 25 14:23 stderr.txt
[2025-07-25 14:23:31] No HITS result produced
[2025-07-25 14:23:31]  *** Contents of shared directory: ***
[2025-07-25 14:23:31] total 223748
[2025-07-25 14:23:31] -rw-r--r--. 2 boinc boinc 228427642 Jul 25 14:18 ATLAS.root_0
[2025-07-25 14:23:31] -rw-r--r--. 2 boinc boinc     15095 Jul 25 14:18 start_atlas.sh
[2025-07-25 14:23:31] -rw-r--r--. 2 boinc boinc    542884 Jul 25 14:18 input.tar.gz
[2025-07-25 14:23:31] -rw-------. 1 boinc boinc    122880 Jul 25 14:23 result.tar.gz
14:23:33 (1175194): run_atlas exited; CPU time 28.187896
14:23:33 (1175194): called boinc_finish(0)

</stderr_txt>
]]>

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