Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:31:47 (2966901): wrapper (7.7.26015): starting
19:31:47 (2966901): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 19:31:47] Arguments: --nthreads 8
[2025-07-25 19:31:47] Threads: 8
[2025-07-25 19:31:47] Checking for CVMFS
[2025-07-25 19:31:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 19:31:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 19:31:47] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 19:31:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 19:31:48] 2.13.1.0 82162 5964 216772 148757 0 395 35653116 40960001 16766 16776704 0 17949485 99.864 13551171 17513 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 19:31:48] CVMFS is ok
[2025-07-25 19:31:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 19:31:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 19:31:48] Further information can be found at the LHC@home message board.
[2025-07-25 19:31:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 19:31:48] Checking for apptainer binary...
[2025-07-25 19:31:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 19:31:48] Running /usr/bin/apptainer --version
[2025-07-25 19:31:48] apptainer version 1.4.1-1.el9
[2025-07-25 19:31:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 19:31:48] c-211-33-1.aglt2.org
[2025-07-25 19:31:48] apptainer works
[2025-07-25 19:31:48] Set ATHENA_PROC_NUMBER=8
[2025-07-25 19:31:48] Set ATHENA_CORE_NUMBER=8
[2025-07-25 19:31:48] Starting ATLAS job with PandaID=6745057472
[2025-07-25 19:31:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:02:34 (3222186): wrapper (7.7.26015): starting
22:02:34 (3222186): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 22:02:34] Arguments: --nthreads 8
[2025-07-25 22:02:34] Threads: 8
[2025-07-25 22:02:34] This job has been restarted, cleaning up previous attempt
[2025-07-25 22:02:34] Checking for CVMFS
[2025-07-25 22:02:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 22:02:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 22:02:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 22:02:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 22:02:35] 2.13.1.0 82162 6115 199792 148759 2 196 35681052 40960001 17524 16776704 0 18302270 99.866 13553982 17513 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 22:02:35] CVMFS is ok
[2025-07-25 22:02:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 22:02:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 22:02:35] Further information can be found at the LHC@home message board.
[2025-07-25 22:02:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 22:02:35] Checking for apptainer binary...
[2025-07-25 22:02:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 22:02:35] Running /usr/bin/apptainer --version
[2025-07-25 22:02:35] apptainer version 1.4.1-1.el9
[2025-07-25 22:02:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 22:02:35] c-211-33-1.aglt2.org
[2025-07-25 22:02:35] apptainer works
[2025-07-25 22:02:35] Set ATHENA_PROC_NUMBER=8
[2025-07-25 22:02:35] Set ATHENA_CORE_NUMBER=8
[2025-07-25 22:02:35] Starting ATLAS job with PandaID=6745057472
[2025-07-25 22:02:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 01:29:36]  *** The last 200 lines of the pilot log: ***
[2025-07-26 01:29:36] 2025-07-26 05:29:02,250 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 01:29:36] 2025-07-26 05:29:02,250 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 01:29:36] 2025-07-26 05:29:02,251 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 01:29:36] 2025-07-26 05:29:02,252 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 01:29:36] 2025-07-26 05:29:02,258 | INFO     | fitting pss+swap vs Time
[2025-07-26 01:29:36] 2025-07-26 05:29:02,259 | INFO     | sum of square deviations: 2555893074.970303
[2025-07-26 01:29:36] 2025-07-26 05:29:02,261 | INFO     | sum of deviations: 48720050909.8911
[2025-07-26 01:29:36] 2025-07-26 05:29:02,261 | INFO     | mean x: 1753501545.3069308
[2025-07-26 01:29:36] 2025-07-26 05:29:02,261 | INFO     | mean y: 2484320.292079208
[2025-07-26 01:29:36] 2025-07-26 05:29:02,261 | INFO     | -- intersect: -33422499453.302986
[2025-07-26 01:29:36] 2025-07-26 05:29:02,261 | INFO     | intersect: -33422499453.302986
[2025-07-26 01:29:36] 2025-07-26 05:29:02,262 | INFO     | chi2: 1.6204706053039835
[2025-07-26 01:29:36] 2025-07-26 05:29:02,262 | INFO     | sum of square deviations: 2370764204.6700454
[2025-07-26 01:29:36] 2025-07-26 05:29:02,264 | INFO     | sum of deviations: 47436195650.28936
[2025-07-26 01:29:36] 2025-07-26 05:29:02,264 | INFO     | mean x: 1753501392.8071065
[2025-07-26 01:29:36] 2025-07-26 05:29:02,264 | INFO     | mean y: 2483262.507614213
[2025-07-26 01:29:36] 2025-07-26 05:29:02,264 | INFO     | -- intersect: -35083011523.68915
[2025-07-26 01:29:36] 2025-07-26 05:29:02,264 | INFO     | intersect: -35083011523.68915
[2025-07-26 01:29:36] 2025-07-26 05:29:02,264 | INFO     | chi2: 1.6201817900287403
[2025-07-26 01:29:36] 2025-07-26 05:29:02,264 | INFO     | current chi2=1.6201817900287403 (change=0.01782292590176177 %)
[2025-07-26 01:29:36] 2025-07-26 05:29:02,265 | INFO     | right removable region: 196
[2025-07-26 01:29:36] 2025-07-26 05:29:02,265 | INFO     | sum of square deviations: 2370714304.1319714
[2025-07-26 01:29:36] 2025-07-26 05:29:02,266 | INFO     | sum of deviations: 13071931227.131979
[2025-07-26 01:29:36] 2025-07-26 05:29:02,266 | INFO     | mean x: 1753501697.8274112
[2025-07-26 01:29:36] 2025-07-26 05:29:02,267 | INFO     | mean y: 2513424.8274111673
[2025-07-26 01:29:36] 2025-07-26 05:29:02,267 | INFO     | -- intersect: -9666156292.442364
[2025-07-26 01:29:36] 2025-07-26 05:29:02,267 | INFO     | intersect: -9666156292.442364
[2025-07-26 01:29:36] 2025-07-26 05:29:02,267 | INFO     | chi2: 0.03273204195953741
[2025-07-26 01:29:36] 2025-07-26 05:29:02,267 | INFO     | current chi2=0.03273204195953741 (change=97.98009036063957 %)
[2025-07-26 01:29:36] 2025-07-26 05:29:02,267 | INFO     | sum of square deviations: 2194722652.994784
[2025-07-26 01:29:36] 2025-07-26 05:29:02,269 | INFO     | sum of deviations: 8255199167.156273
[2025-07-26 01:29:36] 2025-07-26 05:29:02,269 | INFO     | mean x: 1753501850.3385417
[2025-07-26 01:29:36] 2025-07-26 05:29:02,269 | INFO     | mean y: 2517552.84375
[2025-07-26 01:29:36] 2025-07-26 05:29:02,269 | INFO     | -- intersect: -6593079842.922556
[2025-07-26 01:29:36] 2025-07-26 05:29:02,269 | INFO     | intersect: -6593079842.922556
[2025-07-26 01:29:36] 2025-07-26 05:29:02,269 | INFO     | chi2: 0.002226864589363831
[2025-07-26 01:29:36] 2025-07-26 05:29:02,269 | INFO     | current chi2=0.002226864589363831 (change=93.19668295636237 %)
[2025-07-26 01:29:36] 2025-07-26 05:29:02,270 | INFO     | sum of square deviations: 2027660913.8074872
[2025-07-26 01:29:36] 2025-07-26 05:29:02,271 | INFO     | sum of deviations: 7509262761.87701
[2025-07-26 01:29:36] 2025-07-26 05:29:02,271 | INFO     | mean x: 1753502002.8502674
[2025-07-26 01:29:36] 2025-07-26 05:29:02,271 | INFO     | mean y: 2518236.4598930483
[2025-07-26 01:29:36] 2025-07-26 05:29:02,272 | INFO     | -- intersect: -6491421259.64386
[2025-07-26 01:29:36] 2025-07-26 05:29:02,272 | INFO     | intersect: -6491421259.64386
[2025-07-26 01:29:36] 2025-07-26 05:29:02,272 | INFO     | chi2: 0.0020452606661074207
[2025-07-26 01:29:36] 2025-07-26 05:29:02,272 | INFO     | current chi2=0.0020452606661074207 (change=8.155139927403077 %)
[2025-07-26 01:29:36] 2025-07-26 05:29:02,272 | INFO     | left removable region: 30
[2025-07-26 01:29:36] 2025-07-26 05:29:02,273 | INFO     | sum of square deviations: 1418353225.0903573
[2025-07-26 01:29:36] 2025-07-26 05:29:02,274 | INFO     | sum of deviations: 4069456823.674699
[2025-07-26 01:29:36] 2025-07-26 05:29:02,274 | INFO     | mean x: 1753502277.379518
[2025-07-26 01:29:36] 2025-07-26 05:29:02,274 | INFO     | mean y: 2521404.43373494
[2025-07-26 01:29:36] 2025-07-26 05:29:02,274 | INFO     | -- intersect: -5028525644.9052
[2025-07-26 01:29:36] 2025-07-26 05:29:02,274 | INFO     | intersect: -5028525644.9052
[2025-07-26 01:29:36] 2025-07-26 05:29:02,275 | INFO     | chi2: 0.000614037962883748
[2025-07-26 01:29:36] 2025-07-26 05:29:02,275 | INFO     | -- intersect: -5028525644.9052
[2025-07-26 01:29:36] 2025-07-26 05:29:02,275 | INFO     | current memory leak: 2.87 B/s (using 166 data points, chi2=0.00)
[2025-07-26 01:29:36] 2025-07-26 05:29:02,276 | INFO     | could have reported an average CPU frequency of 2518 MHz (10 samples)
[2025-07-26 01:29:36] 2025-07-26 05:29:02,276 | INFO     | ..............................
[2025-07-26 01:29:36] 2025-07-26 05:29:02,276 | INFO     | . Timing measurements:
[2025-07-26 01:29:36] 2025-07-26 05:29:02,276 | INFO     | . get job = 0 s
[2025-07-26 01:29:36] 2025-07-26 05:29:02,276 | INFO     | . initial setup = 1 s
[2025-07-26 01:29:36] 2025-07-26 05:29:02,276 | INFO     | . payload setup = 13 s
[2025-07-26 01:29:36] 2025-07-26 05:29:02,276 | INFO     | . stage-in = 0 s
[2025-07-26 01:29:36] 2025-07-26 05:29:02,276 | INFO     | . payload execution = 12312 s
[2025-07-26 01:29:36] 2025-07-26 05:29:02,277 | INFO     | . stage-out = 2 s
[2025-07-26 01:29:36] 2025-07-26 05:29:02,277 | INFO     | . log creation = 0 s
[2025-07-26 01:29:36] 2025-07-26 05:29:02,277 | INFO     | ..............................
[2025-07-26 01:29:36] 2025-07-26 05:29:02,551 | INFO     | 
[2025-07-26 01:29:36] 2025-07-26 05:29:02,551 | INFO     | job summary report
[2025-07-26 01:29:36] 2025-07-26 05:29:02,551 | INFO     | --------------------------------------------------
[2025-07-26 01:29:36] 2025-07-26 05:29:02,551 | INFO     | PanDA job id: 6745057472
[2025-07-26 01:29:36] 2025-07-26 05:29:02,551 | INFO     | task id: 45743349
[2025-07-26 01:29:36] 2025-07-26 05:29:02,551 | INFO     | errors: (none)
[2025-07-26 01:29:36] 2025-07-26 05:29:02,552 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 01:29:36] 2025-07-26 05:29:02,552 | INFO     | pilot state: finished 
[2025-07-26 01:29:36] 2025-07-26 05:29:02,552 | INFO     | transexitcode: 0
[2025-07-26 01:29:36] 2025-07-26 05:29:02,552 | INFO     | exeerrorcode: 0
[2025-07-26 01:29:36] 2025-07-26 05:29:02,552 | INFO     | exeerrordiag: 
[2025-07-26 01:29:36] 2025-07-26 05:29:02,552 | INFO     | exitcode: 0
[2025-07-26 01:29:36] 2025-07-26 05:29:02,552 | INFO     | exitmsg: OK
[2025-07-26 01:29:36] 2025-07-26 05:29:02,552 | INFO     | cpuconsumptiontime: 57524 s
[2025-07-26 01:29:36] 2025-07-26 05:29:02,552 | INFO     | nevents: 400
[2025-07-26 01:29:36] 2025-07-26 05:29:02,552 | INFO     | neventsw: 0
[2025-07-26 01:29:36] 2025-07-26 05:29:02,552 | INFO     | pid: 3252260
[2025-07-26 01:29:36] 2025-07-26 05:29:02,552 | INFO     | pgrp: 3252260
[2025-07-26 01:29:36] 2025-07-26 05:29:02,552 | INFO     | corecount: 8
[2025-07-26 01:29:36] 2025-07-26 05:29:02,553 | INFO     | event service: False
[2025-07-26 01:29:36] 2025-07-26 05:29:02,553 | INFO     | sizes: {0: 2397302, 1: 2397501, 9: 2397763, 12: 2397791, 12330: 2427666, 12331: 2427665, 12334: 2436847, 12337: 2436903, 12349: 2437097}
[2025-07-26 01:29:36] 2025-07-26 05:29:02,553 | INFO     | --------------------------------------------------
[2025-07-26 01:29:36] 2025-07-26 05:29:02,553 | INFO     | 
[2025-07-26 01:29:36] 2025-07-26 05:29:02,553 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 01:29:36] 2025-07-26 05:29:02,620 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,621 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,621 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,621 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,621 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,622 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,622 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,622 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,622 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,622 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,622 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,622 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 01:29:36] 2025-07-26 05:29:02,622 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,622 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 01:29:36] 2025-07-26 05:29:02,622 | INFO     | job 6745057472 has completed (purged errors)
[2025-07-26 01:29:36] 2025-07-26 05:29:02,623 | INFO     | overall cleanup function is called
[2025-07-26 01:29:36] 2025-07-26 05:29:03,639 | INFO     | --- collectZombieJob: --- 10, [3252260]
[2025-07-26 01:29:36] 2025-07-26 05:29:03,639 | INFO     | zombie collector waiting for pid 3252260
[2025-07-26 01:29:36] 2025-07-26 05:29:03,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 01:29:36] 2025-07-26 05:29:03,639 | INFO     | collected zombie processes
[2025-07-26 01:29:36] 2025-07-26 05:29:03,640 | INFO     | will attempt to kill all subprocesses of pid=3252260
[2025-07-26 01:29:36] 2025-07-26 05:29:04,222 | INFO     | process IDs to be killed: [3252260] (in reverse order)
[2025-07-26 01:29:36] 2025-07-26 05:29:04,354 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 01:29:36] 2025-07-26 05:29:04,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 01:29:36] 2025-07-26 05:29:04,370 | INFO     | did not find any defunct processes belonging to 3252260
[2025-07-26 01:29:36] 2025-07-26 05:29:04,386 | INFO     | did not find any defunct processes belonging to 3252260
[2025-07-26 01:29:36] 2025-07-26 05:29:04,388 | INFO     | ready for new job
[2025-07-26 01:29:36] 2025-07-26 05:29:04,388 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 01:29:36] 2025-07-26 05:29:04,390 | INFO     | ***************************************
[2025-07-26 01:29:36] 2025-07-26 05:29:04,391 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 01:29:36] 2025-07-26 05:29:04,391 | INFO     | ***************************************
[2025-07-26 01:29:36] 2025-07-26 05:29:04,391 | INFO     | 
[2025-07-26 01:29:36] 2025-07-26 05:29:04,397 | INFO     | architecture information:
[2025-07-26 01:29:36] 2025-07-26 05:29:04,397 | INFO     | executing command: cat /etc/os-release
[2025-07-26 01:29:36] 2025-07-26 05:29:04,425 | INFO     | cat /etc/os-release:
[2025-07-26 01:29:36] NAME="CentOS Linux"
[2025-07-26 01:29:36] VERSION="7 (Core)"
[2025-07-26 01:29:36] ID="centos"
[2025-07-26 01:29:36] ID_LIKE="rhel fedora"
[2025-07-26 01:29:36] VERSION_ID="7"
[2025-07-26 01:29:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 01:29:36] ANSI_COLOR="0;31"
[2025-07-26 01:29:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 01:29:36] HOME_URL="https://www.centos.org/"
[2025-07-26 01:29:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 01:29:36] 
[2025-07-26 01:29:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 01:29:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 01:29:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 01:29:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 01:29:36] 
[2025-07-26 01:29:36] 2025-07-26 05:29:04,426 | INFO     | ***************************************
[2025-07-26 01:29:36] 2025-07-26 05:29:04,929 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 01:29:36] 2025-07-26 05:29:04,984 | INFO     | sufficient remaining disk space (128638255104 B)
[2025-07-26 01:29:36] 2025-07-26 05:29:04,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 01:29:36] 2025-07-26 05:29:04,985 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 01:29:36] 2025-07-26 05:29:04,985 | INFO     | update_server=False
[2025-07-26 01:29:36] 2025-07-26 05:29:04,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 01:29:36] 2025-07-26 05:29:04,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 01:29:36] 2025-07-26 05:29:05,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:29:36] 2025-07-26 05:29:05,097 | INFO     | aborting loop
[2025-07-26 01:29:36] 2025-07-26 05:29:05,155 | INFO     | all data control threads have been joined
[2025-07-26 01:29:36] 2025-07-26 05:29:05,307 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 01:29:36] 2025-07-26 05:29:05,991 | INFO     | [job] retrieve thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:06,097 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:06,103 | INFO     | [job] job monitor thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:06,161 | INFO     | [data] control thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:06,185 | INFO     | all payload control threads have been joined
[2025-07-26 01:29:36] 2025-07-26 05:29:06,341 | INFO     | [job] validate thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:06,539 | INFO     | all job control threads have been joined
[2025-07-26 01:29:36] 2025-07-26 05:29:06,602 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:06,741 | INFO     | [payload] failed_post thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:07,025 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:07,078 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:07,191 | INFO     | [payload] control thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:07,267 | INFO     | [payload] validate_post thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:07,314 | INFO     | [data] copytool_out thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:07,410 | INFO     | [data] copytool_in thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:07,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:29:36] 2025-07-26 05:29:07,545 | INFO     | [job] control thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:08,441 | INFO     | [job] queue monitor thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:08,995 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 01:29:36] 2025-07-26 05:29:09,920 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139987304302400)>', '<ExcThread(monitor, started 139986506594048)>']
[2025-07-26 01:29:36] 2025-07-26 05:29:14,945 | INFO     | all workflow threads have been joined
[2025-07-26 01:29:36] 2025-07-26 05:29:14,949 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 01:29:36] 2025-07-26 05:29:14,949 | INFO     | traces error code: 0
[2025-07-26 01:29:36] 2025-07-26 05:29:14,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 01:29:36] 2025-07-26 05:29:35,899 | INFO     | PID=3232928 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 01:29:36] 2025-07-26 05:29:35,900 | INFO     | .. there are 15 such processes running
[2025-07-26 01:29:36] 2025-07-26 05:29:35,900 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 01:29:36] 2025-07-26 05:29:35,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 01:29:36] 2025-07-26 05:29:35,900 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 01:29:36] 2025-07-26 05:29:35,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 01:29:36] 2025-07-26 05:29:35,900 | INFO     | [monitor] control thread has ended
[2025-07-26 01:29:36] 2025-07-26 05:29:36,175 [wrapper] ==== pilot stdout END ====
[2025-07-26 01:29:36] 2025-07-26 05:29:36,195 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 01:29:36] 2025-07-26 05:29:36,223 [wrapper] pilotpid: 3232928
[2025-07-26 01:29:36] 2025-07-26 05:29:36,227 [wrapper] Pilot exit status: 0
[2025-07-26 01:29:36] 2025-07-26 05:29:36,277 [wrapper] pandaids: 6745057472 6745057472
[2025-07-26 01:29:36] 2025-07-26 05:29:36,354 [wrapper] cleanup supervisor_pilot 3545534 3232930
[2025-07-26 01:29:36] 2025-07-26 05:29:36,360 [wrapper] Test setup, not cleaning
[2025-07-26 01:29:36] 2025-07-26 05:29:36,372 [wrapper] apfmon messages muted
[2025-07-26 01:29:36] 2025-07-26 05:29:36,376 [wrapper] ==== wrapper stdout END ====
[2025-07-26 01:29:36] 2025-07-26 05:29:36,401 [wrapper] ==== wrapper stderr END ====
[2025-07-26 01:29:36]  *** Error codes and diagnostics ***
[2025-07-26 01:29:36]     "exeErrorCode": 0,
[2025-07-26 01:29:36]     "exeErrorDiag": "",
[2025-07-26 01:29:36]     "pilotErrorCode": 0,
[2025-07-26 01:29:36]     "pilotErrorDiag": "",
[2025-07-26 01:29:36]  *** Listing of results directory ***
[2025-07-26 01:29:36] total 494288
[2025-07-26 01:29:36] drwx------. 4 boincer umatlas      4096 Jun 17 06:04 pilot3
[2025-07-26 01:29:36] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 11:14 pilot3.tar.gz
[2025-07-26 01:29:36] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 11:23 queuedata.json
[2025-07-26 01:29:36] -rwx------. 1 boincer umatlas     36292 Jul 25 11:23 runpilot2-wrapper.sh
[2025-07-26 01:29:36] -rw-r--r--. 1 boincer umatlas       100 Jul 25 19:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 01:29:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 19:31 run_atlas
[2025-07-26 01:29:36] -rw-r--r--. 1 boincer umatlas       105 Jul 25 19:31 job.xml
[2025-07-26 01:29:36] -rw-r--r--. 3 boincer umatlas 144147932 Jul 25 19:31 EVNT.45743347._001295.pool.root.1
[2025-07-26 01:29:36] -rw-r--r--. 3 boincer umatlas 144147932 Jul 25 19:31 ATLAS.root_0
[2025-07-26 01:29:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 19:31 start_atlas.sh
[2025-07-26 01:29:36] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 19:31 shared
[2025-07-26 01:29:36] -rw-r--r--. 2 boincer umatlas    542889 Jul 25 19:31 input.tar.gz
[2025-07-26 01:29:36] -rw-r--r--. 1 boincer umatlas         0 Jul 25 19:31 boinc_lockfile
[2025-07-26 01:29:36] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 22:02 pandaJob.out
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas    979985 Jul 25 22:02 agis_schedconf.cvmfs.json
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas 211122130 Jul 26 01:27 HITS.45743349._023016.pool.root.1
[2025-07-26 01:29:36] -rw-r--r--. 1 boincer umatlas       531 Jul 26 01:28 boinc_task_state.xml
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas      1056 Jul 26 01:28 memory_monitor_summary.json
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas   1593052 Jul 26 01:28 agis_ddmendpoints.agis.ALL.json
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas    378052 Jul 26 01:28 log.45743349._023016.job.log.tgz.1
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas        96 Jul 26 01:28 pilot_heartbeat.json
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas      7855 Jul 26 01:29 heartbeat.json
[2025-07-26 01:29:36] -rw-r--r--. 1 boincer umatlas      6858 Jul 26 01:29 init_data.xml
[2025-07-26 01:29:36] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 01:29 boinc_mmap_file
[2025-07-26 01:29:36] -rw-r--r--. 1 boincer umatlas        28 Jul 26 01:29 wrapper_checkpoint.txt
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas       823 Jul 26 01:29 pilotlog.txt
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas   1043514 Jul 26 01:29 log.45743349._023016.job.log.1
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas       357 Jul 26 01:29 output.list
[2025-07-26 01:29:36] -rw-r--r--. 1 boincer umatlas       620 Jul 26 01:29 runtime_log
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas   1443840 Jul 26 01:29 result.tar.gz
[2025-07-26 01:29:36] -rw-r--r--. 1 boincer umatlas      8756 Jul 26 01:29 runtime_log.err
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas       787 Jul 26 01:29 QtqLDmyRZz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOqPLDmeVISwn.diag
[2025-07-26 01:29:36] -rw-r--r--. 1 boincer umatlas     23182 Jul 26 01:29 stderr.txt
[2025-07-26 01:29:36] HITS file was successfully produced:
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas 211122130 Jul 26 01:27 shared/HITS.pool.root.1
[2025-07-26 01:29:36]  *** Contents of shared directory: ***
[2025-07-26 01:29:36] total 348916
[2025-07-26 01:29:36] -rw-r--r--. 3 boincer umatlas 144147932 Jul 25 19:31 ATLAS.root_0
[2025-07-26 01:29:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 19:31 start_atlas.sh
[2025-07-26 01:29:36] -rw-r--r--. 2 boincer umatlas    542889 Jul 25 19:31 input.tar.gz
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas 211122130 Jul 26 01:27 HITS.pool.root.1
[2025-07-26 01:29:36] -rw-------. 1 boincer umatlas   1443840 Jul 26 01:29 result.tar.gz
01:29:38 (3222186): run_atlas exited; CPU time 57928.205378
01:29:38 (3222186): called boinc_finish(0)

</stderr_txt>
]]>

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