Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
23:23:04 (1479411): wrapper (7.7.26015): starting
23:23:04 (1479411): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 23:23:04] Arguments: --nthreads 4
[2025-07-26 23:23:04] Threads: 4
[2025-07-26 23:23:04] Checking for CVMFS
[2025-07-26 23:23:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 23:23:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 23:23:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 23:23:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 23:23:04] 2.12.7.0 1254317 6709 70072 148790 1 188 4318181 6144000 1834 130560 0 12715619 99.991 256753 2899 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-07-26 23:23:04] CVMFS is ok
[2025-07-26 23:23:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 23:23:04] Checking for apptainer binary...
[2025-07-26 23:23:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 23:23:04] Running /usr/bin/apptainer --version
[2025-07-26 23:23:04] apptainer version 1.4.0
[2025-07-26 23:23:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 23:23:04] Ryzen8
[2025-07-26 23:23:04] apptainer works
[2025-07-26 23:23:04] Set ATHENA_PROC_NUMBER=4
[2025-07-26 23:23:04] Set ATHENA_CORE_NUMBER=4
[2025-07-26 23:23:05] Starting ATLAS job with PandaID=6745057094
[2025-07-26 23:23:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 00:54:35]  *** The last 200 lines of the pilot log: ***
[2025-07-27 00:54:35]  lfn=log.45743349._022899.job.log.tgz.1
[2025-07-27 00:54:35]  mtime=0
[2025-07-27 00:54:35]  protocol_id=None
[2025-07-27 00:54:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 00:54:35]  replicas=None
[2025-07-27 00:54:35]  scope=mc23_13p6TeV
[2025-07-27 00:54:35]  status=None
[2025-07-27 00:54:35]  status_code=0
[2025-07-27 00:54:35]  storage_token=
[2025-07-27 00:54:35]  surl=/var/lib/boinc2/slots/0/PanDA_Pilot-6745057094/log.45743349._022899.job.log.tgz.1
[2025-07-27 00:54:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/87/log.45743349._022899.job.log.tgz.1
[2025-07-27 00:54:35]  workdir=None
[2025-07-27 00:54:35] ]
[2025-07-27 00:54:35] 2025-07-26 22:53:57,214 | INFO     | transferring file log.45743349._022899.job.log.tgz.1 from /var/lib/boinc2/slots/0/PanDA_Pilot-6745057094/log.45743349._022899.job.log.tgz.1 to /var/lib/boinc2/slot
[2025-07-27 00:54:35] 2025-07-26 22:53:57,214 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc2/slots/0/PanDA_Pilot-6745057094/log.45743349._022899.job.log.tgz.1 /var/lib/boinc2/slots/0/log.45743349._022899.j
[2025-07-27 00:54:35] 2025-07-26 22:53:57,224 | INFO     | adding to output.list: log.45743349._022899.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/87/log.45743349._022899.job.log.tg
[2025-07-27 00:54:35] 2025-07-26 22:53:57,225 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 00:54:35] 2025-07-26 22:53:57,225 | INFO     | summary of transferred files:
[2025-07-27 00:54:35] 2025-07-26 22:53:57,225 | INFO     |  -- lfn=log.45743349._022899.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 00:54:35] 2025-07-26 22:53:57,225 | INFO     | stage-out finished correctly
[2025-07-27 00:54:35] 2025-07-26 22:53:57,490 | INFO     | monitor loop #414: job 0:6745057094 is in state 'finished'
[2025-07-27 00:54:35] 2025-07-26 22:53:57,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 00:54:35] 2025-07-26 22:53:59,073 | INFO     | PID=1483042 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 00:54:35] 2025-07-26 22:53:59,073 | INFO     | .. there are 3 such processes running
[2025-07-27 00:54:35] 2025-07-26 22:53:59,246 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 00:54:35] 2025-07-26 22:53:59,993 | INFO     | monitor loop #415: job 0:6745057094 is in state 'finished'
[2025-07-27 00:54:35] 2025-07-26 22:53:59,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 00:54:35] 2025-07-26 22:54:00,443 | INFO     | job 6745057094 has state=finished
[2025-07-27 00:54:35] 2025-07-26 22:54:00,443 | INFO     | preparing for final server update for job 6745057094 in state='finished'
[2025-07-27 00:54:35] 2025-07-26 22:54:00,443 | INFO     | this job has now completed (state=finished)
[2025-07-27 00:54:35] 2025-07-26 22:54:00,443 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 00:54:35] 2025-07-26 22:54:00,443 | INFO     | log transfer has been attempted: DONE
[2025-07-27 00:54:35] 2025-07-26 22:54:00,443 | INFO     | job 6745057094 has finished - writing final server update
[2025-07-27 00:54:35] 2025-07-26 22:54:00,443 | INFO     | total number of processed events: 400 (read)
[2025-07-27 00:54:35] 2025-07-26 22:54:00,444 | INFO     | executing command: lscpu
[2025-07-27 00:54:35] 2025-07-26 22:54:00,457 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 00:54:35] 2025-07-26 22:54:02,063 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 00:54:35] 2025-07-26 22:54:02,065 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4334.010416666667
[2025-07-27 00:54:35] 2025-07-26 22:54:02,066 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6745057094/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 00:54:35] 2025-07-26 22:54:02,066 | INFO     | extracted standard info from prmon json
[2025-07-27 00:54:35] 2025-07-26 22:54:02,066 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 00:54:35] 2025-07-26 22:54:02,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 00:54:35] 2025-07-26 22:54:02,067 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 00:54:35] 2025-07-26 22:54:02,067 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | fitting pss+swap vs Time
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | sum of square deviations: 170944600.5
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | sum of deviations: -14632602407.999998
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | mean x: 1753567782.5
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | mean y: 2507670.56097561
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | -- intersect: 150105289985.70474
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | intersect: 150105289985.70474
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | chi2: 0.07908861726957403
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | -- intersect: 150105289985.70474
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | current memory leak: -85.60 B/s (using 82 data points, chi2=0.08)
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | could have reported an average CPU frequency of 4335 MHz (7 samples)
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | ..............................
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | . Timing measurements:
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | . get job = 0 s
[2025-07-27 00:54:35] 2025-07-26 22:54:02,068 | INFO     | . initial setup = 0 s
[2025-07-27 00:54:35] 2025-07-26 22:54:02,069 | INFO     | . payload setup = 2 s
[2025-07-27 00:54:35] 2025-07-26 22:54:02,069 | INFO     | . stage-in = 0 s
[2025-07-27 00:54:35] 2025-07-26 22:54:02,069 | INFO     | . payload execution = 5428 s
[2025-07-27 00:54:35] 2025-07-26 22:54:02,069 | INFO     | . stage-out = 0 s
[2025-07-27 00:54:35] 2025-07-26 22:54:02,069 | INFO     | . log creation = 0 s
[2025-07-27 00:54:35] 2025-07-26 22:54:02,069 | INFO     | ..............................
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | 
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | job summary report
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | --------------------------------------------------
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | PanDA job id: 6745057094
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | task id: 45743349
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | errors: (none)
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | pilot state: finished 
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | transexitcode: 0
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | exeerrorcode: 0
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | exeerrordiag: 
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | exitcode: 0
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | exitmsg: OK
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | cpuconsumptiontime: 20977 s
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | nevents: 400
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | neventsw: 0
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | pid: 1489522
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | pgrp: 1489522
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | corecount: 4
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | event service: False
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | sizes: {0: 2397309, 1: 2397423, 2: 2397713, 11: 2397741, 5435: 2433439, 5437: 2433439, 5440: 2433761}
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | --------------------------------------------------
[2025-07-27 00:54:35] 2025-07-26 22:54:02,504 | INFO     | 
[2025-07-27 00:54:35] 2025-07-26 22:54:02,505 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,517 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 00:54:35] 2025-07-26 22:54:02,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,517 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 00:54:35] 2025-07-26 22:54:02,517 | INFO     | job 6745057094 has completed (purged errors)
[2025-07-27 00:54:35] 2025-07-26 22:54:02,517 | INFO     | overall cleanup function is called
[2025-07-27 00:54:35] 2025-07-26 22:54:03,521 | INFO     | --- collectZombieJob: --- 10, [1489522]
[2025-07-27 00:54:35] 2025-07-26 22:54:03,521 | INFO     | zombie collector waiting for pid 1489522
[2025-07-27 00:54:35] 2025-07-26 22:54:03,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 00:54:35] 2025-07-26 22:54:03,521 | INFO     | collected zombie processes
[2025-07-27 00:54:35] 2025-07-26 22:54:03,521 | INFO     | will attempt to kill all subprocesses of pid=1489522
[2025-07-27 00:54:35] 2025-07-26 22:54:03,573 | INFO     | process IDs to be killed: [1489522] (in reverse order)
[2025-07-27 00:54:35] 2025-07-26 22:54:03,598 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 00:54:35] 2025-07-26 22:54:03,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 00:54:35] 2025-07-26 22:54:03,600 | INFO     | did not find any defunct processes belonging to 1489522
[2025-07-27 00:54:35] 2025-07-26 22:54:03,601 | INFO     | did not find any defunct processes belonging to 1489522
[2025-07-27 00:54:35] 2025-07-26 22:54:03,602 | INFO     | ready for new job
[2025-07-27 00:54:35] 2025-07-26 22:54:03,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 00:54:35] 2025-07-26 22:54:03,602 | INFO     | ***************************************
[2025-07-27 00:54:35] 2025-07-26 22:54:03,602 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 00:54:35] 2025-07-26 22:54:03,602 | INFO     | ***************************************
[2025-07-27 00:54:35] 2025-07-26 22:54:03,602 | INFO     | 
[2025-07-27 00:54:35] 2025-07-26 22:54:03,603 | INFO     | architecture information:
[2025-07-27 00:54:35] 2025-07-26 22:54:03,603 | INFO     | executing command: cat /etc/os-release
[2025-07-27 00:54:35] 2025-07-26 22:54:03,611 | INFO     | cat /etc/os-release:
[2025-07-27 00:54:35] NAME="CentOS Linux"
[2025-07-27 00:54:35] VERSION="7 (Core)"
[2025-07-27 00:54:35] ID="centos"
[2025-07-27 00:54:35] ID_LIKE="rhel fedora"
[2025-07-27 00:54:35] VERSION_ID="7"
[2025-07-27 00:54:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 00:54:35] ANSI_COLOR="0;31"
[2025-07-27 00:54:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 00:54:35] HOME_URL="https://www.centos.org/"
[2025-07-27 00:54:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 00:54:35] 
[2025-07-27 00:54:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 00:54:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 00:54:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 00:54:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 00:54:35] 
[2025-07-27 00:54:35] 2025-07-26 22:54:03,611 | INFO     | ***************************************
[2025-07-27 00:54:35] 2025-07-26 22:54:04,114 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-07-27 00:54:35] 2025-07-26 22:54:04,122 | INFO     | sufficient remaining disk space (178419400704 B)
[2025-07-27 00:54:35] 2025-07-26 22:54:04,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 00:54:35] 2025-07-26 22:54:04,123 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 00:54:35] 2025-07-26 22:54:04,123 | INFO     | update_server=False
[2025-07-27 00:54:35] 2025-07-26 22:54:04,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 00:54:35] 2025-07-26 22:54:04,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:54:35] 2025-07-26 22:54:04,123 | INFO     | aborting loop
[2025-07-27 00:54:35] 2025-07-26 22:54:04,211 | INFO     | all payload control threads have been joined
[2025-07-27 00:54:35] 2025-07-26 22:54:04,442 | INFO     | all job control threads have been joined
[2025-07-27 00:54:35] 2025-07-26 22:54:04,729 | INFO     | all data control threads have been joined
[2025-07-27 00:54:35] 2025-07-26 22:54:05,128 | INFO     | [job] job monitor thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:05,128 | INFO     | [job] retrieve thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:05,214 | INFO     | [payload] control thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:05,238 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:05,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 00:54:35] 2025-07-26 22:54:05,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 00:54:35] 2025-07-26 22:54:05,448 | INFO     | [job] control thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:05,569 | INFO     | [data] copytool_in thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:05,633 | INFO     | [payload] validate_post thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:05,734 | INFO     | [data] control thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:06,198 | INFO     | [payload] failed_post thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:06,490 | INFO     | [job] validate thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:06,568 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:06,591 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:07,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:54:35] 2025-07-26 22:54:07,287 | INFO     | [data] copytool_out thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:08,128 | INFO     | [job] queue monitor thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:09,295 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:14,414 | INFO     | job.realtimelogging is not enabled
[2025-07-27 00:54:35] 2025-07-26 22:54:15,420 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 00:54:35] 2025-07-26 22:54:15,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748850247488)>', '<ExcThread(monitor, started 139748228196096)>']
[2025-07-27 00:54:35] 2025-07-26 22:54:20,801 | INFO     | all workflow threads have been joined
[2025-07-27 00:54:35] 2025-07-26 22:54:20,802 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 00:54:35] 2025-07-26 22:54:20,802 | INFO     | traces error code: 0
[2025-07-27 00:54:35] 2025-07-26 22:54:20,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 00:54:35] 2025-07-26 22:54:35,201 | INFO     | PID=1483042 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 00:54:35] 2025-07-26 22:54:35,201 | INFO     | .. there are 3 such processes running
[2025-07-27 00:54:35] 2025-07-26 22:54:35,201 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 00:54:35] 2025-07-26 22:54:35,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 00:54:35] 2025-07-26 22:54:35,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 00:54:35] 2025-07-26 22:54:35,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 00:54:35] 2025-07-26 22:54:35,201 | INFO     | [monitor] control thread has ended
[2025-07-27 00:54:35] 2025-07-26 22:54:35,261 [wrapper] ==== pilot stdout END ====
[2025-07-27 00:54:35] 2025-07-26 22:54:35,262 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 00:54:35] 2025-07-26 22:54:35,264 [wrapper] pilotpid: 1483042
[2025-07-27 00:54:35] 2025-07-26 22:54:35,265 [wrapper] Pilot exit status: 0
[2025-07-27 00:54:35] 2025-07-26 22:54:35,269 [wrapper] pandaids: 6745057094
[2025-07-27 00:54:35] 2025-07-26 22:54:35,286 [wrapper] cleanup supervisor_pilot 1552953 1483043
[2025-07-27 00:54:35] 2025-07-26 22:54:35,287 [wrapper] Test setup, not cleaning
[2025-07-27 00:54:35] 2025-07-26 22:54:35,288 [wrapper] apfmon messages muted
[2025-07-27 00:54:35] 2025-07-26 22:54:35,290 [wrapper] ==== wrapper stdout END ====
[2025-07-27 00:54:35] 2025-07-26 22:54:35,291 [wrapper] ==== wrapper stderr END ====
[2025-07-27 00:54:35]  *** Error codes and diagnostics ***
[2025-07-27 00:54:35]     "exeErrorCode": 0,
[2025-07-27 00:54:35]     "exeErrorDiag": "",
[2025-07-27 00:54:35]     "pilotErrorCode": 0,
[2025-07-27 00:54:35]     "pilotErrorDiag": "",
[2025-07-27 00:54:35]  *** Listing of results directory ***
[2025-07-27 00:54:35] insgesamt 426808
[2025-07-27 00:54:35] -rw-r--r-- 1 boinc boinc    530466 25. Jul 17:03 pilot3.tar.gz
[2025-07-27 00:54:35] -rwx------ 1 boinc boinc     36292 25. Jul 17:11 runpilot2-wrapper.sh
[2025-07-27 00:54:35] -rw-r--r-- 1 boinc boinc      5112 25. Jul 17:11 queuedata.json
[2025-07-27 00:54:35] -rw-r--r-- 1 boinc boinc       100 26. Jul 23:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 00:54:35] -rwxr-xr-x 1 boinc boinc      7986 26. Jul 23:23 run_atlas
[2025-07-27 00:54:35] -rw-r--r-- 1 boinc boinc       105 26. Jul 23:23 job.xml
[2025-07-27 00:54:35] -rw-r--r-- 2 boinc boinc     15095 26. Jul 23:23 start_atlas.sh
[2025-07-27 00:54:35] drwxrwx--x 2 boinc boinc      4096 26. Jul 23:23 shared
[2025-07-27 00:54:35] -rw-r--r-- 2 boinc boinc    542884 26. Jul 23:23 input.tar.gz
[2025-07-27 00:54:35] -rw-r--r-- 1 boinc boinc      9586 26. Jul 23:23 init_data.xml
[2025-07-27 00:54:35] -rw-r--r-- 2 boinc boinc 228940666 26. Jul 23:23 EVNT.45743347._001290.pool.root.1
[2025-07-27 00:54:35] -rw-r--r-- 1 boinc boinc         0 26. Jul 23:23 boinc_lockfile
[2025-07-27 00:54:35] -rw-r--r-- 1 boinc boinc      2561 26. Jul 23:23 pandaJob.out
[2025-07-27 00:54:35] -rw------- 1 boinc boinc    980125 26. Jul 23:23 agis_schedconf.cvmfs.json
[2025-07-27 00:54:35] -rw------- 1 boinc boinc   1593052 26. Jul 23:23 agis_ddmendpoints.agis.ALL.json
[2025-07-27 00:54:35] drwx------ 4 boinc boinc      4096 26. Jul 23:23 pilot3
[2025-07-27 00:54:35] -rw------- 1 boinc boinc 202633373 27. Jul 00:53 HITS.45743349._022899.pool.root.1
[2025-07-27 00:54:35] -rw------- 1 boinc boinc        95 27. Jul 00:53 pilot_heartbeat.json
[2025-07-27 00:54:35] -rw------- 1 boinc boinc      1024 27. Jul 00:53 memory_monitor_summary.json
[2025-07-27 00:54:35] -rw------- 1 boinc boinc    251988 27. Jul 00:53 log.45743349._022899.job.log.tgz.1
[2025-07-27 00:54:35] -rw-r--r-- 1 boinc boinc       529 27. Jul 00:54 boinc_task_state.xml
[2025-07-27 00:54:35] -rw------- 1 boinc boinc      7762 27. Jul 00:54 heartbeat.json
[2025-07-27 00:54:35] -rw-r--r-- 1 boinc boinc      8192 27. Jul 00:54 boinc_mmap_file
[2025-07-27 00:54:35] -rw-r--r-- 1 boinc boinc        27 27. Jul 00:54 wrapper_checkpoint.txt
[2025-07-27 00:54:35] -rw------- 1 boinc boinc       822 27. Jul 00:54 pilotlog.txt
[2025-07-27 00:54:35] -rw------- 1 boinc boinc    544304 27. Jul 00:54 log.45743349._022899.job.log.1
[2025-07-27 00:54:35] -rw------- 1 boinc boinc       357 27. Jul 00:54 output.list
[2025-07-27 00:54:35] -rw-r--r-- 1 boinc boinc       620 27. Jul 00:54 runtime_log
[2025-07-27 00:54:35] -rw------- 1 boinc boinc    819200 27. Jul 00:54 result.tar.gz
[2025-07-27 00:54:35] -rw-r--r-- 1 boinc boinc      8637 27. Jul 00:54 runtime_log.err
[2025-07-27 00:54:35] -rw------- 1 boinc boinc       641 27. Jul 00:54 rnoLDmaGZz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmI8yKDmaFiPnm.diag
[2025-07-27 00:54:35] -rw-r--r-- 1 boinc boinc     21393 27. Jul 00:54 stderr.txt
[2025-07-27 00:54:35] HITS file was successfully produced:
[2025-07-27 00:54:35] -rw------- 1 boinc boinc 202633373 27. Jul 00:53 shared/HITS.pool.root.1
[2025-07-27 00:54:35]  *** Contents of shared directory: ***
[2025-07-27 00:54:35] insgesamt 422820
[2025-07-27 00:54:35] -rw-r--r-- 2 boinc boinc     15095 26. Jul 23:23 start_atlas.sh
[2025-07-27 00:54:35] -rw-r--r-- 2 boinc boinc    542884 26. Jul 23:23 input.tar.gz
[2025-07-27 00:54:35] -rw-r--r-- 2 boinc boinc 228940666 26. Jul 23:23 ATLAS.root_0
[2025-07-27 00:54:35] -rw------- 1 boinc boinc 202633373 27. Jul 00:53 HITS.pool.root.1
[2025-07-27 00:54:35] -rw------- 1 boinc boinc    819200 27. Jul 00:54 result.tar.gz
00:54:36 (1479411): run_atlas exited; CPU time 21010.491753
00:54:36 (1479411): called boinc_finish(0)

</stderr_txt>
]]>

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