Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-26 04:59:06 (3388): Detected: vboxwrapper 26206
2025-07-26 04:59:06 (3388): Detected: BOINC client v8.0.2
2025-07-26 04:59:06 (3388): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-07-26 04:59:06 (3388): Successfully copied 'init_data.xml' to the shared directory.
2025-07-26 04:59:07 (3388): Create VM. (boinc_abdda62c086e3a12, slot#4)
2025-07-26 04:59:07 (3388): Setting Memory Size for VM. (4400MB)
2025-07-26 04:59:08 (3388): Setting CPU Count for VM. (4)
2025-07-26 04:59:08 (3388): Setting Chipset Options for VM.
2025-07-26 04:59:08 (3388): Setting Graphics Controller Options for VM.
2025-07-26 04:59:09 (3388): Setting Boot Options for VM.
2025-07-26 04:59:09 (3388): Setting Network Configuration for NAT.
2025-07-26 04:59:09 (3388): Enabling VM Network Access.
2025-07-26 04:59:09 (3388): Disabling USB Support for VM.
2025-07-26 04:59:10 (3388): Disabling COM Port Support for VM.
2025-07-26 04:59:10 (3388): Disabling LPT Port Support for VM.
2025-07-26 04:59:10 (3388): Disabling Audio Support for VM.
2025-07-26 04:59:11 (3388): Disabling Clipboard Support for VM.
2025-07-26 04:59:11 (3388): Disabling Drag and Drop Support for VM.
2025-07-26 04:59:11 (3388): Adding storage controller(s) to VM.
2025-07-26 04:59:11 (3388): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-26 04:59:14 (3388): Adding VirtualBox Guest Additions to VM.
2025-07-26 04:59:15 (3388): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-26 04:59:15 (3388): forwarding host port 58942 to guest port 80
2025-07-26 04:59:15 (3388): Enabling remote desktop for VM.
2025-07-26 04:59:15 (3388): Required extension pack not installed, remote desktop not enabled.
2025-07-26 04:59:15 (3388): Enabling shared directory for VM.
2025-07-26 04:59:16 (3388): Starting VM using VBoxManage interface. (boinc_abdda62c086e3a12, slot#4)
2025-07-26 04:59:23 (3388): Successfully started VM. (PID = '4164')
2025-07-26 04:59:23 (3388): Reporting VM Process ID to BOINC.
2025-07-26 04:59:23 (3388): Guest Log: BIOS: VirtualBox 7.0.6
2025-07-26 04:59:23 (3388): Guest Log: CPUID EDX: 0x178bfbff
2025-07-26 04:59:23 (3388): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-26 04:59:23 (3388): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-26 04:59:23 (3388): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-26 04:59:23 (3388): Detected: Web Application Enabled (http://localhost:58942)
2025-07-26 04:59:23 (3388): Preference change detected
2025-07-26 04:59:23 (3388): Setting CPU throttle for VM. (100%)
2025-07-26 04:59:24 (3388): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-26 04:59:25 (3388): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-26 04:59:25 (3388): Guest Log: BIOS: Booting from Hard Disk...
2025-07-26 04:59:28 (3388): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-26 04:59:28 (3388): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-26 04:59:28 (3388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-26 04:59:36 (3388): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-26 04:59:36 (3388): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-26 04:59:45 (3388): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-26 04:59:45 (3388): Guest Log: 00:00:00.000276 main     Log opened 2025-07-26T04:59:43.500764000Z
2025-07-26 04:59:45 (3388): Guest Log: 00:00:00.000535 main     OS Product: Linux
2025-07-26 04:59:45 (3388): Guest Log: 00:00:00.000615 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-26 04:59:45 (3388): Guest Log: 00:00:00.000674 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-26 04:59:45 (3388): Guest Log: 00:00:00.000731 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-26 04:59:45 (3388): Guest Log: 00:00:00.000733 main     Process ID: 1304
2025-07-26 04:59:45 (3388): Guest Log: 00:00:00.000734 main     Package type: LINUX_64BITS_GENERIC
2025-07-26 04:59:45 (3388): Guest Log: 00:00:00.002322 main     5.2.32 r132073 started. Verbose level = 0
2025-07-26 04:59:45 (3388): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-26 04:59:45 (3388): Guest Log: [INFO] Mounting shared directory
2025-07-26 04:59:45 (3388): Guest Log: [INFO] Checking for init_data.xml
2025-07-26 04:59:55 (3388): Guest Log: 00:00:10.007824 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 460 646 000ns (GuestNow=1 753 495 195 044 864 000 ns GuestLast=1 753 505 983 505 510 000 ns fSetTimeLastLoop=true )
2025-07-26 04:59:58 (3388): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-26 04:59:58 (3388): Guest Log: [INFO] Detected branch: prod
2025-07-26 05:00:09 (3388): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-26 05:00:09 (3388): Guest Log: Copying input files
2025-07-26 05:00:11 (3388): Guest Log: Copied input files into RunAtlas.
2025-07-26 05:00:11 (3388): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-26 05:00:11 (3388): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-26 05:00:11 (3388): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-26 05:00:11 (3388): Guest Log: Further information can be found at the LHC@home message board.
2025-07-26 05:00:38 (3388): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-26 05:00:38 (3388): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-26 05:00:38 (3388): Guest Log: 2.6.3.0 1584 0 32220 148759 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-26 05:00:40 (3388): Guest Log: copied the webapp to /var/www
2025-07-26 05:00:40 (3388): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-26 05:00:40 (3388): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-26 05:00:42 (3388): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-26 05:00:42 (3388): Guest Log:  *** Starting ATLAS job. (PandaID=6745056592 taskID=45743349) ***
2025-07-26 06:41:29 (3388): Status Report: Elapsed Time: '6000.447342'
2025-07-26 06:41:29 (3388): Status Report: CPU Time: '18656.953125'
2025-07-26 08:23:33 (3388): Status Report: Elapsed Time: '12001.282417'
2025-07-26 08:23:33 (3388): Status Report: CPU Time: '42464.640625'
2025-07-26 10:06:44 (3388): Status Report: Elapsed Time: '18002.115942'
2025-07-26 10:06:44 (3388): Status Report: CPU Time: '66374.234375'
2025-07-26 11:19:46 (3388): Guest Log:  *** Job finished ***
2025-07-26 11:19:46 (3388): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:34,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:34,470 | INFO     | [data] copytool_out thread has finished
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:38,455 | INFO     | [data] queue_monitor thread has finished
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:39,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140108133840704)>', '<ExcThread(monitor, started 140107470337792)>']
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:40,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:40,094 | INFO     | [monitor] control thread has ended
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:44,658 | INFO     | all workflow threads have been joined
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:44,658 | INFO     | end of generic workflow (traces error code: 0)
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:44,659 | INFO     | traces error code: 0
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:44,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:44,812 [wrapper] ==== pilot stdout END ====
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:44,819 [wrapper] ==== wrapper stdout RESUME ====
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:44,828 [wrapper] pilotpid: 5957
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:44,837 [wrapper] Pilot exit status: 0
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:44,923 [wrapper] pandaids: 6745056592
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:44,981 [wrapper] cleanup supervisor_pilot 25756 5958
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:44,991 [wrapper] Test setup, not cleaning
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:45,001 [wrapper] apfmon messages muted
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:45,010 [wrapper] ==== wrapper stdout END ====
2025-07-26 11:19:46 (3388): Guest Log: 2025-07-26 08:19:45,019 [wrapper] ==== wrapper stderr END ====
2025-07-26 11:19:46 (3388): Guest Log:  *** Error codes and diagnostics ***
2025-07-26 11:19:46 (3388): Guest Log:     "exeErrorCode": 0,
2025-07-26 11:19:46 (3388): Guest Log:     "exeErrorDiag": "",
2025-07-26 11:19:46 (3388): Guest Log:     "pilotErrorCode": 0,
2025-07-26 11:19:46 (3388): Guest Log:     "pilotErrorDiag": "",
2025-07-26 11:19:46 (3388): Guest Log:  *** Listing of results directory ***
2025-07-26 11:19:46 (3388): Guest Log: total 210076
2025-07-26 11:19:46 (3388): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 25 14:33 pilot3.tar.gz
2025-07-26 11:19:46 (3388): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 25 14:54 runpilot2-wrapper.sh
2025-07-26 11:19:46 (3388): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 25 14:54 queuedata.json
2025-07-26 11:19:46 (3388): Guest Log: -rwxr-xr-x. 1 atlas atlas      9227 Jul 26 02:00 init_data.xml
2025-07-26 11:19:46 (3388): Guest Log: -rwxr-xr-x. 1 atlas atlas    542893 Jul 26 02:00 input.tar.gz
2025-07-26 11:19:46 (3388): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 26 02:00 start_atlas.sh
2025-07-26 11:19:46 (3388): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 26 02:00 EVNT.45743347._001283.pool.root.1 -> /data/./ATLAS.root_0
2025-07-26 11:19:46 (3388): Guest Log: -rw-r--r--. 1 atlas atlas      2562 Jul 26 02:00 pandaJob.out
2025-07-26 11:19:46 (3388): Guest Log: -rw-------. 1 atlas atlas    979985 Jul 26 02:05 agis_schedconf.cvmfs.json
2025-07-26 11:19:46 (3388): Guest Log: drwx------. 4 atlas atlas      4096 Jul 26 02:05 pilot3
2025-07-26 11:19:46 (3388): Guest Log: -rw-------. 1 atlas atlas 206817461 Jul 26 08:18 HITS.45743349._022731.pool.root.1
2025-07-26 11:19:46 (3388): Guest Log: -rw-------. 1 atlas atlas        95 Jul 26 08:18 pilot_heartbeat.json
2025-07-26 11:19:46 (3388): Guest Log: -rw-------. 1 atlas atlas      1003 Jul 26 08:19 memory_monitor_summary.json
2025-07-26 11:19:46 (3388): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 26 08:19 agis_ddmendpoints.agis.ALL.json
2025-07-26 11:19:46 (3388): Guest Log: -rw-------. 1 atlas atlas    407446 Jul 26 08:19 log.45743349._022731.job.log.tgz.1
2025-07-26 11:19:46 (3388): Guest Log: -rw-------. 1 atlas atlas      7743 Jul 26 08:19 heartbeat.json
2025-07-26 11:19:46 (3388): Guest Log: -rw-------. 1 atlas atlas      4540 Jul 26 08:19 pilotlog.txt
2025-07-26 11:19:46 (3388): Guest Log: -rw-------. 1 atlas atlas   1832236 Jul 26 08:19 log.45743349._022731.job.log.1
2025-07-26 11:19:46 (3388): Guest Log: -rw-------. 1 atlas atlas       357 Jul 26 08:19 output.list
2025-07-26 11:19:46 (3388): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 26 08:19 runtime_log
2025-07-26 11:19:46 (3388): Guest Log: -rw-------. 1 atlas atlas   2263040 Jul 26 08:19 result.tar.gz
2025-07-26 11:19:46 (3388): Guest Log: -rw-r--r--. 1 atlas atlas      8609 Jul 26 08:19 runtime_log.err
2025-07-26 11:19:46 (3388): Guest Log: -rw-------. 1 atlas atlas       662 Jul 26 08:19 4zaMDmIzYz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm86yKDmvTTQ3n.diag
2025-07-26 11:19:46 (3388): Guest Log: Looking for outputfile HITS.45743349._022731.pool.root.1
2025-07-26 11:19:46 (3388): Guest Log: HITS file was successfully produced
2025-07-26 11:19:46 (3388): Guest Log: -rw-------. 1 atlas atlas 206817461 Jul 26 08:18 /home/atlas/RunAtlas/HITS.45743349._022731.pool.root.1
2025-07-26 11:19:48 (3388): Guest Log: Successfully finished the ATLAS job!
2025-07-26 11:19:48 (3388): Guest Log: Copying the results back to the shared directory!
2025-07-26 11:19:48 (3388): Guest Log:  *** Contents of shared directory: ***
2025-07-26 11:19:48 (3388): Guest Log: total 428804
2025-07-26 11:19:48 (3388): Guest Log: -rwxrwxrwx. 1 root root 229434243 Jul 26 01:59 ATLAS.root_0
2025-07-26 11:19:48 (3388): Guest Log: -rwxrwxrwx. 1 root root 206817461 Jul 26 08:19 HITS.pool.root.1
2025-07-26 11:19:48 (3388): Guest Log: -rwxrwxrwx. 1 root root      9227 Jul 26 01:59 init_data.xml
2025-07-26 11:19:48 (3388): Guest Log: -rwxrwxrwx. 1 root root    542893 Jul 25 20:35 input.tar.gz
2025-07-26 11:19:48 (3388): Guest Log: -rwxrwxrwx. 1 root root   2263040 Jul 26 08:19 result.tar.gz
2025-07-26 11:19:48 (3388): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 25 20:35 start_atlas.sh
2025-07-26 11:19:48 (3388): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-26 11:19:48 (3388): VM Completion File Detected.
2025-07-26 11:19:48 (3388): Powering off VM.
2025-07-26 11:19:49 (3388): Successfully stopped VM.
2025-07-26 11:19:49 (3388): Deregistering VM. (boinc_abdda62c086e3a12, slot#4)
2025-07-26 11:19:49 (3388): Removing network bandwidth throttle group from VM.
2025-07-26 11:19:49 (3388): Removing VM from VirtualBox.
11:19:54 (3388): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN