Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:58:41 (3051483): wrapper (7.7.26015): starting
12:58:41 (3051483): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 12:58:41] Arguments: --nthreads 8
[2025-07-25 12:58:41] Threads: 8
[2025-07-25 12:58:41] Checking for CVMFS
[2025-07-25 12:58:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 12:58:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 12:58:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 12:58:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 12:58:42] 2.11.3.0 22626 476456 219308 148751 2 683 27004074 45568000 7559 130560 0 2478849831 99.756 2020202447 20168 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-07-25 12:58:42] CVMFS is ok
[2025-07-25 12:58:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 12:58:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 12:58:42] Further information can be found at the LHC@home message board.
[2025-07-25 12:58:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 12:58:42] Checking for apptainer binary...
[2025-07-25 12:58:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 12:58:42] Running /usr/bin/apptainer --version
[2025-07-25 12:58:42] apptainer version 1.3.3-1.el9
[2025-07-25 12:58:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 12:58:43] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0003.triumf.lcg
[2025-07-25 12:58:43] apptainer works
[2025-07-25 12:58:43] Set ATHENA_PROC_NUMBER=8
[2025-07-25 12:58:43] Set ATHENA_CORE_NUMBER=8
[2025-07-25 12:58:43] Starting ATLAS job with PandaID=6745059082
[2025-07-25 12:58:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 13:03:06]  *** The last 200 lines of the pilot log: ***
[2025-07-25 13:03:06] 2025-07-25 20:02:32,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 13:03:06] 2025-07-25 20:02:32,914 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 13:03:06] 2025-07-25 20:02:32,914 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 13:03:06] 2025-07-25 20:02:32,936 | WARNING  | wrong length of table data, x=[1753473597.0], y=[1011.0] (must be same and length>=4)
[2025-07-25 13:03:06] 2025-07-25 20:02:32,936 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-25 13:03:06] 2025-07-25 20:02:32,936 | INFO     | ..............................
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . Timing measurements:
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . get job = 0 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . initial setup = 3 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . payload setup = 13 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . stage-in = 0 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . payload execution = 40 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . stage-out = 0 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . log creation = 0 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | ..............................
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 13:03:06] 2025-07-25 20:02:32,938 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745059082/pilotlog.txt
[2025-07-25 13:03:06] 2025-07-25 20:02:33,019 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 13:03:06] - Log from pilotlog.txt -
[2025-07-25 13:03:06] 2025-07-25 20:02:32,912 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745059082/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 13:03:06] 2025-07-25 20:02:32,913 | INFO     | extracted standard info from prmon json
[2025-07-25 13:03:06] 2025-07-25 20:02:32,913 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 13:03:06] 2025-07-25 20:02:32,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 13:03:06] 2025-07-25 20:02:32,914 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 13:03:06] 2025-07-25 20:02:32,914 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 13:03:06] 2025-07-25 20:02:32,936 | WARNING  | wrong length of table data, x=[1753473597.0], y=[1011.0] (must be same and length>=4)
[2025-07-25 13:03:06] 2025-07-25 20:02:32,936 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-25 13:03:06] 2025-07-25 20:02:32,936 | INFO     | ..............................
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . Timing measurements:
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . get job = 0 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . initial setup = 3 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . payload setup = 13 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . stage-in = 0 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . payload execution = 40 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . stage-out = 0 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . log creation = 0 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | ..............................
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 13:03:06] 2025-07-25 20:02:32,938 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745059082/pilotlog.txt
[2025-07-25 13:03:06] 2025-07-25 20:02:33,019 | WARNING  | 
[2025-07-25 13:03:06] [begin log extracts]
[2025-07-25 13:03:06] - Log from pilotlog.txt -
[2025-07-25 13:03:06] 2025-07-25 20:02:32,912 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745059082/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 13:03:06] 2025-07-25 20:02:32,913 | INFO     | extracted standard info from prmon json
[2025-07-25 13:03:06] 2025-07-25 20:02:32,913 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 13:03:06] 2025-07-25 20:02:32,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 13:03:06] 2025-07-25 20:02:32,914 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 13:03:06] 2025-07-25 20:02:32,914 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 13:03:06] 2025-07-25 20:02:32,936 | WARNING  | wrong length of table data, x=[1753473597.0], y=[1011.0] (must be same and length>=4)
[2025-07-25 13:03:06] 2025-07-25 20:02:32,936 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-25 13:03:06] 2025-07-25 20:02:32,936 | INFO     | ..............................
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . Timing measurements:
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . get job = 0 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . initial setup = 3 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . payload setup = 13 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . stage-in = 0 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . payload execution = 40 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . stage-out = 0 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | . log creation = 0 s
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | ..............................
[2025-07-25 13:03:06] 2025-07-25 20:02:32,937 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 13:03:06] 2025-07-25 20:02:32,938 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745059082/pilotlog.txt
[2025-07-25 13:03:06] [end log extracts]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,020 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 13:03:06] 2025-07-25 20:02:33,020 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 13:03:06] 2025-07-25 20:02:33,114 | INFO     | 
[2025-07-25 13:03:06] 2025-07-25 20:02:33,114 | INFO     | job summary report
[2025-07-25 13:03:06] 2025-07-25 20:02:33,114 | INFO     | --------------------------------------------------
[2025-07-25 13:03:06] 2025-07-25 20:02:33,114 | INFO     | PanDA job id: 6745059082
[2025-07-25 13:03:06] 2025-07-25 20:02:33,114 | INFO     | task id: 45743349
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 13:00:14,589 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | pilot state: failed 
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | transexitcode: 65
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | exeerrorcode: 65
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | exitcode: 65
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | cpuconsumptiontime: 17 s
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | nevents: 0
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | neventsw: 0
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | pid: 3061508
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | pgrp: 3061508
[2025-07-25 13:03:06] 2025-07-25 20:02:33,115 | INFO     | corecount: 8
[2025-07-25 13:03:06] 2025-07-25 20:02:33,116 | INFO     | event service: False
[2025-07-25 13:03:06] 2025-07-25 20:02:33,116 | INFO     | sizes: {0: 2397299, 1: 2397498, 10: 2397760, 11: 2397788, 57: 2421122, 58: 2421098, 60: 2425546, 64: 2425574, 187: 2425768}
[2025-07-25 13:03:06] 2025-07-25 20:02:33,116 | INFO     | --------------------------------------------------
[2025-07-25 13:03:06] 2025-07-25 20:02:33,116 | INFO     | 
[2025-07-25 13:03:06] 2025-07-25 20:02:33,116 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 13:03:06] 2025-07-25 20:02:33,143 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,144 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,144 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,144 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,144 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,144 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,144 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,144 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,144 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,144 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,144 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,144 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,144 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,144 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,145 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 13:03:06] 2025-07-25 20:02:33,145 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,145 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 13:03:06] 2025-07-25 20:02:33,145 | INFO     | job 6745059082 has completed (purged errors)
[2025-07-25 13:03:06] 2025-07-25 20:02:33,145 | INFO     | overall cleanup function is called
[2025-07-25 13:03:06] 2025-07-25 20:02:34,152 | INFO     | --- collectZombieJob: --- 10, [3061508]
[2025-07-25 13:03:06] 2025-07-25 20:02:34,152 | INFO     | zombie collector waiting for pid 3061508
[2025-07-25 13:03:06] 2025-07-25 20:02:34,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 13:03:06] 2025-07-25 20:02:34,152 | INFO     | collected zombie processes
[2025-07-25 13:03:06] 2025-07-25 20:02:34,152 | INFO     | will attempt to kill all subprocesses of pid=3061508
[2025-07-25 13:03:06] 2025-07-25 20:02:34,466 | INFO     | process IDs to be killed: [3061508] (in reverse order)
[2025-07-25 13:03:06] 2025-07-25 20:02:34,543 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 13:03:06] 2025-07-25 20:02:34,543 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 13:03:06] 2025-07-25 20:02:34,550 | INFO     | did not find any defunct processes belonging to 3061508
[2025-07-25 13:03:06] 2025-07-25 20:02:34,557 | INFO     | did not find any defunct processes belonging to 3061508
[2025-07-25 13:03:06] 2025-07-25 20:02:34,558 | INFO     | ready for new job
[2025-07-25 13:03:06] 2025-07-25 20:02:34,558 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 13:03:06] 2025-07-25 20:02:34,559 | INFO     | ***************************************
[2025-07-25 13:03:06] 2025-07-25 20:02:34,559 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 13:03:06] 2025-07-25 20:02:34,559 | INFO     | ***************************************
[2025-07-25 13:03:06] 2025-07-25 20:02:34,559 | INFO     | 
[2025-07-25 13:03:06] 2025-07-25 20:02:34,572 | INFO     | architecture information:
[2025-07-25 13:03:06] 2025-07-25 20:02:34,573 | INFO     | executing command: cat /etc/os-release
[2025-07-25 13:03:06] 2025-07-25 20:02:34,585 | INFO     | cat /etc/os-release:
[2025-07-25 13:03:06] NAME="CentOS Linux"
[2025-07-25 13:03:06] VERSION="7 (Core)"
[2025-07-25 13:03:06] ID="centos"
[2025-07-25 13:03:06] ID_LIKE="rhel fedora"
[2025-07-25 13:03:06] VERSION_ID="7"
[2025-07-25 13:03:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 13:03:06] ANSI_COLOR="0;31"
[2025-07-25 13:03:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 13:03:06] HOME_URL="https://www.centos.org/"
[2025-07-25 13:03:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 13:03:06] 
[2025-07-25 13:03:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 13:03:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 13:03:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 13:03:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 13:03:06] 
[2025-07-25 13:03:06] 2025-07-25 20:02:34,585 | INFO     | ***************************************
[2025-07-25 13:03:06] 2025-07-25 20:02:35,089 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 13:03:06] 2025-07-25 20:02:35,183 | INFO     | sufficient remaining disk space (1245514301440 B)
[2025-07-25 13:03:06] 2025-07-25 20:02:35,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 13:03:06] 2025-07-25 20:02:35,184 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 13:03:06] 2025-07-25 20:02:35,184 | INFO     | update_server=False
[2025-07-25 13:03:06] 2025-07-25 20:02:35,184 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 13:03:06] 2025-07-25 20:02:35,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 13:03:06] 2025-07-25 20:02:35,193 | INFO     | aborting loop
[2025-07-25 13:03:06] 2025-07-25 20:02:35,202 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 13:03:06] 2025-07-25 20:02:35,706 | INFO     | all data control threads have been joined
[2025-07-25 13:03:06] 2025-07-25 20:02:35,720 | INFO     | all payload control threads have been joined
[2025-07-25 13:03:06] 2025-07-25 20:02:35,878 | INFO     | all job control threads have been joined
[2025-07-25 13:03:06] 2025-07-25 20:02:36,190 | INFO     | [job] retrieve thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:36,198 | INFO     | [job] job monitor thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:36,202 | INFO     | [payload] validate_post thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:36,623 | INFO     | [data] copytool_in thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:36,712 | INFO     | [data] control thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:36,727 | INFO     | [payload] control thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:36,845 | INFO     | [payload] failed_post thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:36,883 | INFO     | [job] control thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:37,033 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:37,064 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:37,216 | INFO     | [data] copytool_out thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:37,413 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:37,475 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:37,543 | INFO     | [job] validate thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:37,723 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 13:03:06] 2025-07-25 20:02:38,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 13:03:06] 2025-07-25 20:02:39,131 | INFO     | [job] queue monitor thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:41,731 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 13:03:06] 2025-07-25 20:02:42,227 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140682525771584)>', '<ExcThread(monitor, started 140681821533952)>']
[2025-07-25 13:03:06] 2025-07-25 20:02:47,252 | INFO     | all workflow threads have been joined
[2025-07-25 13:03:06] 2025-07-25 20:02:47,253 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 13:03:06] 2025-07-25 20:02:47,253 | INFO     | traces error code: 0
[2025-07-25 13:03:06] 2025-07-25 20:02:47,253 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 13:03:06] 2025-07-25 20:03:06,025 | INFO     | PID=3055103 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 13:03:06] 2025-07-25 20:03:06,025 | INFO     | .. there are 19 such processes running
[2025-07-25 13:03:06] 2025-07-25 20:03:06,025 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 13:03:06] 2025-07-25 20:03:06,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 13:03:06] 2025-07-25 20:03:06,025 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 13:03:06] 2025-07-25 20:03:06,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 13:03:06] 2025-07-25 20:03:06,025 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 13:03:06] 2025-07-25 20:03:06,026 | INFO     | [monitor] control thread has ended
[2025-07-25 13:03:06] 2025-07-25 20:03:06,142 [wrapper] ==== pilot stdout END ====
[2025-07-25 13:03:06] 2025-07-25 20:03:06,144 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 13:03:06] 2025-07-25 20:03:06,145 [wrapper] pilotpid: 3055103
[2025-07-25 13:03:06] 2025-07-25 20:03:06,152 [wrapper] Pilot exit status: 0
[2025-07-25 13:03:06] 2025-07-25 20:03:06,164 [wrapper] pandaids: 6745059082
[2025-07-25 13:03:06] 2025-07-25 20:03:06,200 [wrapper] cleanup supervisor_pilot 3055109 3055104
[2025-07-25 13:03:06] 2025-07-25 20:03:06,208 [wrapper] Test setup, not cleaning
[2025-07-25 13:03:06] 2025-07-25 20:03:06,210 [wrapper] apfmon messages muted
[2025-07-25 13:03:06] 2025-07-25 20:03:06,212 [wrapper] ==== wrapper stdout END ====
[2025-07-25 13:03:06] 2025-07-25 20:03:06,214 [wrapper] ==== wrapper stderr END ====
[2025-07-25 13:03:06]  *** Error codes and diagnostics ***
[2025-07-25 13:03:06]     "exeErrorCode": 65,
[2025-07-25 13:03:06]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 13:03:06]     "pilotErrorCode": 1305,
[2025-07-25 13:03:06]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 13:03:06]  *** Listing of results directory ***
[2025-07-25 13:03:06] total 145028
[2025-07-25 13:03:06] -rw-r--r--. 1 boinc boinc      5112 Jul 25 10:32 queuedata.json
[2025-07-25 13:03:06] -rw-r--r--. 1 boinc boinc    530466 Jul 25 10:32 pilot3.tar.gz
[2025-07-25 13:03:06] -rwx------. 1 boinc boinc     36292 Jul 25 10:32 runpilot2-wrapper.sh
[2025-07-25 13:03:06] -rw-r--r--. 1 boinc boinc       100 Jul 25 12:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 13:03:06] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 12:58 run_atlas
[2025-07-25 13:03:06] -rw-r--r--. 1 boinc boinc       105 Jul 25 12:58 job.xml
[2025-07-25 13:03:06] -rw-r--r--. 2 boinc boinc 144425955 Jul 25 12:58 EVNT.45743347._001392.pool.root.1
[2025-07-25 13:03:06] -rw-r--r--. 1 boinc boinc      6447 Jul 25 12:58 init_data.xml
[2025-07-25 13:03:06] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:58 start_atlas.sh
[2025-07-25 13:03:06] drwxrwx--x. 2 boinc boinc      4096 Jul 25 12:58 shared
[2025-07-25 13:03:06] -rw-r--r--. 2 boinc boinc    542891 Jul 25 12:58 input.tar.gz
[2025-07-25 13:03:06] -rw-r--r--. 1 boinc boinc         0 Jul 25 12:58 boinc_lockfile
[2025-07-25 13:03:06] -rw-r--r--. 1 boinc boinc      2562 Jul 25 12:58 pandaJob.out
[2025-07-25 13:03:06] -rw-------. 1 boinc boinc    979993 Jul 25 12:59 agis_schedconf.cvmfs.json
[2025-07-25 13:03:06] -rw-------. 1 boinc boinc   1593052 Jul 25 12:59 agis_ddmendpoints.agis.ALL.json
[2025-07-25 13:03:06] drwx------. 4 boinc boinc      4096 Jul 25 12:59 pilot3
[2025-07-25 13:03:06] -rw-r--r--. 1 boinc boinc       522 Jul 25 13:00 boinc_task_state.xml
[2025-07-25 13:03:06] -rw-------. 1 boinc boinc       969 Jul 25 13:00 memory_monitor_summary.json
[2025-07-25 13:03:06] -rw-------. 1 boinc boinc     21100 Jul 25 13:00 log.45743349._024485.job.log.tgz.1
[2025-07-25 13:03:06] -rw-------. 1 boinc boinc        95 Jul 25 13:02 pilot_heartbeat.json
[2025-07-25 13:03:06] -rw-------. 1 boinc boinc      8411 Jul 25 13:02 heartbeat.json
[2025-07-25 13:03:06] -rw-r--r--. 1 boinc boinc        22 Jul 25 13:03 wrapper_checkpoint.txt
[2025-07-25 13:03:06] -rw-r--r--. 1 boinc boinc      8192 Jul 25 13:03 boinc_mmap_file
[2025-07-25 13:03:06] -rw-------. 1 boinc boinc       893 Jul 25 13:03 pilotlog.txt
[2025-07-25 13:03:06] -rw-------. 1 boinc boinc     78379 Jul 25 13:03 log.45743349._024485.job.log.1
[2025-07-25 13:03:06] -rw-------. 1 boinc boinc       188 Jul 25 13:03 output.list
[2025-07-25 13:03:06] -rw-r--r--. 1 boinc boinc       620 Jul 25 13:03 runtime_log
[2025-07-25 13:03:06] -rw-------. 1 boinc boinc    122880 Jul 25 13:03 result.tar.gz
[2025-07-25 13:03:06] -rw-r--r--. 1 boinc boinc      8648 Jul 25 13:03 runtime_log.err
[2025-07-25 13:03:06] -rw-------. 1 boinc boinc       644 Jul 25 13:03 1IyLDmQSbz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm5IzKDmzjVWLn.diag
[2025-07-25 13:03:06] -rw-r--r--. 1 boinc boinc     21963 Jul 25 13:03 stderr.txt
[2025-07-25 13:03:06] No HITS result produced
[2025-07-25 13:03:06]  *** Contents of shared directory: ***
[2025-07-25 13:03:06] total 141716
[2025-07-25 13:03:06] -rw-r--r--. 2 boinc boinc 144425955 Jul 25 12:58 ATLAS.root_0
[2025-07-25 13:03:06] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:58 start_atlas.sh
[2025-07-25 13:03:06] -rw-r--r--. 2 boinc boinc    542891 Jul 25 12:58 input.tar.gz
[2025-07-25 13:03:06] -rw-------. 1 boinc boinc    122880 Jul 25 13:03 result.tar.gz
13:03:08 (3051483): run_atlas exited; CPU time 24.326536
13:03:08 (3051483): called boinc_finish(0)

</stderr_txt>
]]>

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