Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:57:22 (12712): wrapper (7.7.26015): starting
15:57:22 (12712): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 15:57:22] Arguments: --nthreads 12
[2025-07-25 15:57:22] Threads: 12
[2025-07-25 15:57:22] Checking for CVMFS
[2025-07-25 15:57:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 15:57:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 15:57:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 15:57:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 15:57:22] 2.11.2.0 3255 109526 101488 148751 1 57 19898439 20275201 1 130560 0 38032784 99.973 9059769 10404 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 15:57:22] CVMFS is ok
[2025-07-25 15:57:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 15:57:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 15:57:22] Further information can be found at the LHC@home message board.
[2025-07-25 15:57:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 15:57:22] Checking for apptainer binary...
[2025-07-25 15:57:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 15:57:22] Running /usr/bin/apptainer --version
[2025-07-25 15:57:22] apptainer version 1.3.2-1.el7
[2025-07-25 15:57:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 15:57:23] c-115-41.aglt2.org
[2025-07-25 15:57:23] apptainer works
[2025-07-25 15:57:24] Set ATHENA_PROC_NUMBER=12
[2025-07-25 15:57:24] Set ATHENA_CORE_NUMBER=12
[2025-07-25 15:57:24] Starting ATLAS job with PandaID=6744979095
[2025-07-25 15:57:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 17:12:50]  *** The last 200 lines of the pilot log: ***
[2025-07-25 17:12:50]  mtime=0
[2025-07-25 17:12:50]  protocol_id=None
[2025-07-25 17:12:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 17:12:50]  replicas=None
[2025-07-25 17:12:50]  scope=mc23_13p6TeV
[2025-07-25 17:12:50]  status=None
[2025-07-25 17:12:50]  status_code=0
[2025-07-25 17:12:50]  storage_token=
[2025-07-25 17:12:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6744979095/log.45743349._019202.job.log.tgz.1
[2025-07-25 17:12:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/05/log.45743349._019202.job.log.tgz.1
[2025-07-25 17:12:50]  workdir=None
[2025-07-25 17:12:50] ]
[2025-07-25 17:12:50] 2025-07-25 21:12:27,860 | INFO     | transferring file log.45743349._019202.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6744979095/log.45743349._019202.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 17:12:50] 2025-07-25 21:12:27,860 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6744979095/log.45743349._019202.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._019202.job
[2025-07-25 17:12:50] 2025-07-25 21:12:27,883 | INFO     | adding to output.list: log.45743349._019202.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/05/log.45743349._019202.job.log.tg
[2025-07-25 17:12:50] 2025-07-25 21:12:27,884 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 17:12:50] 2025-07-25 21:12:27,884 | INFO     | summary of transferred files:
[2025-07-25 17:12:50] 2025-07-25 21:12:27,885 | INFO     |  -- lfn=log.45743349._019202.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 17:12:50] 2025-07-25 21:12:27,885 | INFO     | stage-out finished correctly
[2025-07-25 17:12:50] 2025-07-25 21:12:30,834 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 17:12:50] 2025-07-25 21:12:31,457 | INFO     | job 6744979095 has state=finished
[2025-07-25 17:12:50] 2025-07-25 21:12:31,458 | INFO     | preparing for final server update for job 6744979095 in state='finished'
[2025-07-25 17:12:50] 2025-07-25 21:12:31,458 | INFO     | this job has now completed (state=finished)
[2025-07-25 17:12:50] 2025-07-25 21:12:31,458 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 17:12:50] 2025-07-25 21:12:31,459 | INFO     | log transfer has been attempted: DONE
[2025-07-25 17:12:50] 2025-07-25 21:12:31,459 | INFO     | job 6744979095 has finished - writing final server update
[2025-07-25 17:12:50] 2025-07-25 21:12:31,459 | INFO     | total number of processed events: 400 (read)
[2025-07-25 17:12:50] 2025-07-25 21:12:31,460 | INFO     | executing command: lscpu
[2025-07-25 17:12:50] 2025-07-25 21:12:31,488 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 17:12:50] 2025-07-25 21:12:32,484 | WARNING  | process 22848 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 17:12:50] 2025-07-25 21:12:32,485 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744979095/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 17:12:50] 2025-07-25 21:12:32,568 | INFO     | number of running child processes to parent process 22848: 1
[2025-07-25 17:12:50] 2025-07-25 21:12:32,568 | INFO     | maximum number of monitored processes: 6
[2025-07-25 17:12:50] 2025-07-25 21:12:34,300 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-07-25 17:12:50] 2025-07-25 21:12:34,982 | INFO     | 4500s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-25 17:12:50] 2025-07-25 21:12:35,071 | INFO     | monitor loop #336: job 0:6744979095 is in state 'finished'
[2025-07-25 17:12:50] 2025-07-25 21:12:35,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 17:12:50] 2025-07-25 21:12:36,100 | INFO     | PID=16296 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 17:12:50] 2025-07-25 21:12:37,112 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-25 17:12:50] 2025-07-25 21:12:37,116 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1817.8333333333333
[2025-07-25 17:12:50] 2025-07-25 21:12:37,119 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744979095/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 17:12:50] 2025-07-25 21:12:37,119 | INFO     | extracted standard info from prmon json
[2025-07-25 17:12:50] 2025-07-25 21:12:37,120 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 17:12:50] 2025-07-25 21:12:37,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 17:12:50] 2025-07-25 21:12:37,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 17:12:50] 2025-07-25 21:12:37,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 17:12:50] 2025-07-25 21:12:37,122 | INFO     | fitting pss+swap vs Time
[2025-07-25 17:12:50] 2025-07-25 21:12:37,123 | INFO     | sum of square deviations: 93240818.0
[2025-07-25 17:12:50] 2025-07-25 21:12:37,123 | INFO     | sum of deviations: -2727996371.9999995
[2025-07-25 17:12:50] 2025-07-25 21:12:37,123 | INFO     | mean x: 1753475805.0
[2025-07-25 17:12:50] 2025-07-25 21:12:37,123 | INFO     | mean y: 2761208.462686567
[2025-07-25 17:12:50] 2025-07-25 21:12:37,123 | INFO     | -- intersect: 51305138611.77739
[2025-07-25 17:12:50] 2025-07-25 21:12:37,124 | INFO     | intersect: 51305138611.77739
[2025-07-25 17:12:50] 2025-07-25 21:12:37,124 | INFO     | chi2: 0.0660016756426426
[2025-07-25 17:12:50] 2025-07-25 21:12:37,124 | INFO     | -- intersect: 51305138611.77739
[2025-07-25 17:12:50] 2025-07-25 21:12:37,124 | INFO     | current memory leak: -29.26 B/s (using 67 data points, chi2=0.07)
[2025-07-25 17:12:50] 2025-07-25 21:12:37,124 | INFO     | could have reported an average CPU frequency of 2163 MHz (6 samples)
[2025-07-25 17:12:50] 2025-07-25 21:12:37,124 | INFO     | ..............................
[2025-07-25 17:12:50] 2025-07-25 21:12:37,124 | INFO     | . Timing measurements:
[2025-07-25 17:12:50] 2025-07-25 21:12:37,125 | INFO     | . get job = 0 s
[2025-07-25 17:12:50] 2025-07-25 21:12:37,125 | INFO     | . initial setup = 2 s
[2025-07-25 17:12:50] 2025-07-25 21:12:37,125 | INFO     | . payload setup = 9 s
[2025-07-25 17:12:50] 2025-07-25 21:12:37,125 | INFO     | . stage-in = 0 s
[2025-07-25 17:12:50] 2025-07-25 21:12:37,125 | INFO     | . payload execution = 4460 s
[2025-07-25 17:12:50] 2025-07-25 21:12:37,125 | INFO     | . stage-out = 0 s
[2025-07-25 17:12:50] 2025-07-25 21:12:37,125 | INFO     | . log creation = 0 s
[2025-07-25 17:12:50] 2025-07-25 21:12:37,125 | INFO     | ..............................
[2025-07-25 17:12:50] 2025-07-25 21:12:37,200 | INFO     | 
[2025-07-25 17:12:50] 2025-07-25 21:12:37,200 | INFO     | job summary report
[2025-07-25 17:12:50] 2025-07-25 21:12:37,201 | INFO     | --------------------------------------------------
[2025-07-25 17:12:50] 2025-07-25 21:12:37,201 | INFO     | PanDA job id: 6744979095
[2025-07-25 17:12:50] 2025-07-25 21:12:37,201 | INFO     | task id: 45743349
[2025-07-25 17:12:50] 2025-07-25 21:12:37,201 | INFO     | errors: (none)
[2025-07-25 17:12:50] 2025-07-25 21:12:37,201 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 17:12:50] 2025-07-25 21:12:37,201 | INFO     | pilot state: finished 
[2025-07-25 17:12:50] 2025-07-25 21:12:37,202 | INFO     | transexitcode: 0
[2025-07-25 17:12:50] 2025-07-25 21:12:37,202 | INFO     | exeerrorcode: 0
[2025-07-25 17:12:50] 2025-07-25 21:12:37,202 | INFO     | exeerrordiag: 
[2025-07-25 17:12:50] 2025-07-25 21:12:37,202 | INFO     | exitcode: 0
[2025-07-25 17:12:50] 2025-07-25 21:12:37,202 | INFO     | exitmsg: OK
[2025-07-25 17:12:50] 2025-07-25 21:12:37,202 | INFO     | cpuconsumptiontime: 47520 s
[2025-07-25 17:12:50] 2025-07-25 21:12:37,202 | INFO     | nevents: 400
[2025-07-25 17:12:50] 2025-07-25 21:12:37,203 | INFO     | neventsw: 0
[2025-07-25 17:12:50] 2025-07-25 21:12:37,203 | INFO     | pid: 22848
[2025-07-25 17:12:50] 2025-07-25 21:12:37,203 | INFO     | pgrp: 22848
[2025-07-25 17:12:50] 2025-07-25 21:12:37,203 | INFO     | corecount: 12
[2025-07-25 17:12:50] 2025-07-25 21:12:37,203 | INFO     | event service: False
[2025-07-25 17:12:50] 2025-07-25 21:12:37,203 | INFO     | sizes: {0: 2396645, 1: 2397501, 6: 2397763, 12: 2397791, 4473: 2423896, 4475: 2432894, 4478: 2433078, 4485: 2433272}
[2025-07-25 17:12:50] 2025-07-25 21:12:37,203 | INFO     | --------------------------------------------------
[2025-07-25 17:12:50] 2025-07-25 21:12:37,204 | INFO     | 
[2025-07-25 17:12:50] 2025-07-25 21:12:37,204 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 17:12:50] 2025-07-25 21:12:37,228 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,229 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,229 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,229 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,230 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,230 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,230 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,231 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,231 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,231 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,231 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,231 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,231 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 17:12:50] 2025-07-25 21:12:37,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,232 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 17:12:50] 2025-07-25 21:12:37,232 | INFO     | job 6744979095 has completed (purged errors)
[2025-07-25 17:12:50] 2025-07-25 21:12:37,232 | INFO     | overall cleanup function is called
[2025-07-25 17:12:50] 2025-07-25 21:12:38,240 | INFO     | --- collectZombieJob: --- 10, [22848]
[2025-07-25 17:12:50] 2025-07-25 21:12:38,240 | INFO     | zombie collector waiting for pid 22848
[2025-07-25 17:12:50] 2025-07-25 21:12:38,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 17:12:50] 2025-07-25 21:12:38,241 | INFO     | collected zombie processes
[2025-07-25 17:12:50] 2025-07-25 21:12:38,241 | INFO     | will attempt to kill all subprocesses of pid=22848
[2025-07-25 17:12:50] 2025-07-25 21:12:38,326 | INFO     | process IDs to be killed: [22848] (in reverse order)
[2025-07-25 17:12:50] 2025-07-25 21:12:38,379 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 17:12:50] 2025-07-25 21:12:38,380 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 17:12:50] 2025-07-25 21:12:38,383 | INFO     | did not find any defunct processes belonging to 22848
[2025-07-25 17:12:50] 2025-07-25 21:12:38,386 | INFO     | did not find any defunct processes belonging to 22848
[2025-07-25 17:12:50] 2025-07-25 21:12:38,386 | INFO     | ready for new job
[2025-07-25 17:12:50] 2025-07-25 21:12:38,386 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 17:12:50] 2025-07-25 21:12:38,387 | INFO     | ***************************************
[2025-07-25 17:12:50] 2025-07-25 21:12:38,387 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 17:12:50] 2025-07-25 21:12:38,387 | INFO     | ***************************************
[2025-07-25 17:12:50] 2025-07-25 21:12:38,387 | INFO     | 
[2025-07-25 17:12:50] 2025-07-25 21:12:38,388 | INFO     | architecture information:
[2025-07-25 17:12:50] 2025-07-25 21:12:38,388 | INFO     | executing command: cat /etc/os-release
[2025-07-25 17:12:50] 2025-07-25 21:12:38,404 | INFO     | cat /etc/os-release:
[2025-07-25 17:12:50] NAME="CentOS Linux"
[2025-07-25 17:12:50] VERSION="7 (Core)"
[2025-07-25 17:12:50] ID="centos"
[2025-07-25 17:12:50] ID_LIKE="rhel fedora"
[2025-07-25 17:12:50] VERSION_ID="7"
[2025-07-25 17:12:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 17:12:50] ANSI_COLOR="0;31"
[2025-07-25 17:12:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 17:12:50] HOME_URL="https://www.centos.org/"
[2025-07-25 17:12:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 17:12:50] 
[2025-07-25 17:12:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 17:12:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 17:12:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 17:12:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 17:12:50] 
[2025-07-25 17:12:50] 2025-07-25 21:12:38,405 | INFO     | ***************************************
[2025-07-25 17:12:50] 2025-07-25 21:12:38,908 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 17:12:50] 2025-07-25 21:12:38,926 | INFO     | sufficient remaining disk space (18737004544 B)
[2025-07-25 17:12:50] 2025-07-25 21:12:38,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 17:12:50] 2025-07-25 21:12:38,927 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 17:12:50] 2025-07-25 21:12:38,927 | INFO     | update_server=False
[2025-07-25 17:12:50] 2025-07-25 21:12:38,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 17:12:50] 2025-07-25 21:12:38,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 17:12:50] 2025-07-25 21:12:38,928 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 17:12:50] 2025-07-25 21:12:38,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 17:12:50] 2025-07-25 21:12:38,928 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-25 17:12:50] 2025-07-25 21:12:38,928 | INFO     | aborting loop
[2025-07-25 17:12:50] 2025-07-25 21:12:38,929 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 17:12:50] 2025-07-25 21:12:38,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 17:12:50] 2025-07-25 21:12:38,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 17:12:50] 2025-07-25 21:12:39,496 | INFO     | all data control threads have been joined
[2025-07-25 17:12:50] 2025-07-25 21:12:39,724 | INFO     | all job control threads have been joined
[2025-07-25 17:12:50] 2025-07-25 21:12:39,928 | INFO     | [job] queue monitor thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:39,931 | INFO     | [job] retrieve thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:39,934 | INFO     | [job] job monitor thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:39,977 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:40,063 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:40,088 | INFO     | all payload control threads have been joined
[2025-07-25 17:12:50] 2025-07-25 21:12:40,301 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:40,340 | INFO     | [data] copytool_in thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:40,502 | INFO     | [data] control thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:40,587 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:40,730 | INFO     | [job] control thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:40,843 | INFO     | [payload] failed_post thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:40,934 | INFO     | [data] copytool_out thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:41,082 | INFO     | [job] validate thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:41,093 | INFO     | [payload] control thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:41,282 | INFO     | [payload] validate_post thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:41,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 17:12:50] 2025-07-25 21:12:45,425 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 17:12:50] 2025-07-25 21:12:45,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099832563520)>', '<ExcThread(monitor, started 140099400488704)>']
[2025-07-25 17:12:50] 2025-07-25 21:12:45,964 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 17:12:50] 2025-07-25 21:12:45,976 | INFO     | [monitor] control thread has ended
[2025-07-25 17:12:50] 2025-07-25 21:12:50,569 | INFO     | all workflow threads have been joined
[2025-07-25 17:12:50] 2025-07-25 21:12:50,569 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 17:12:50] 2025-07-25 21:12:50,570 | INFO     | traces error code: 0
[2025-07-25 17:12:50] 2025-07-25 21:12:50,570 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 17:12:50] 2025-07-25 21:12:50,648 [wrapper] ==== pilot stdout END ====
[2025-07-25 17:12:50] 2025-07-25 21:12:50,652 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 17:12:50] 2025-07-25 21:12:50,656 [wrapper] pilotpid: 16296
[2025-07-25 17:12:50] 2025-07-25 21:12:50,660 [wrapper] Pilot exit status: 0
[2025-07-25 17:12:50] 2025-07-25 21:12:50,675 [wrapper] pandaids: 6744979095
[2025-07-25 17:12:50] 2025-07-25 21:12:50,715 [wrapper] cleanup supervisor_pilot 25972 16297
[2025-07-25 17:12:50] 2025-07-25 21:12:50,719 [wrapper] Test setup, not cleaning
[2025-07-25 17:12:50] 2025-07-25 21:12:50,723 [wrapper] apfmon messages muted
[2025-07-25 17:12:50] 2025-07-25 21:12:50,727 [wrapper] ==== wrapper stdout END ====
[2025-07-25 17:12:50] 2025-07-25 21:12:50,730 [wrapper] ==== wrapper stderr END ====
[2025-07-25 17:12:50]  *** Error codes and diagnostics ***
[2025-07-25 17:12:50]     "exeErrorCode": 0,
[2025-07-25 17:12:50]     "exeErrorDiag": "",
[2025-07-25 17:12:50]     "pilotErrorCode": 0,
[2025-07-25 17:12:50]     "pilotErrorDiag": "",
[2025-07-25 17:12:50]  *** Listing of results directory ***
[2025-07-25 17:12:50] total 352616
[2025-07-25 17:12:50] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 05:31 pilot3.tar.gz
[2025-07-25 17:12:50] -rwx------ 1 boincer umatlas     36292 Jul 25 05:31 runpilot2-wrapper.sh
[2025-07-25 17:12:50] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 05:31 queuedata.json
[2025-07-25 17:12:50] -rw-r--r-- 1 boincer umatlas       100 Jul 25 15:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 17:12:50] -rwxr-xr-x 1 boincer umatlas      7986 Jul 25 15:57 run_atlas
[2025-07-25 17:12:50] -rw-r--r-- 1 boincer umatlas       105 Jul 25 15:57 job.xml
[2025-07-25 17:12:50] -rw-r--r-- 2 boincer umatlas 145786598 Jul 25 15:57 EVNT.45743347._000998.pool.root.1
[2025-07-25 17:12:50] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 15:57 start_atlas.sh
[2025-07-25 17:12:50] drwxrwx--x 2 boincer umatlas      4096 Jul 25 15:57 shared
[2025-07-25 17:12:50] -rw-r--r-- 2 boincer umatlas    542885 Jul 25 15:57 input.tar.gz
[2025-07-25 17:12:50] -rw-r--r-- 1 boincer umatlas         0 Jul 25 15:57 boinc_lockfile
[2025-07-25 17:12:50] -rw-r--r-- 1 boincer umatlas      2562 Jul 25 15:57 pandaJob.out
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas    979993 Jul 25 15:57 agis_schedconf.cvmfs.json
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas   1593052 Jul 25 15:57 agis_ddmendpoints.agis.ALL.json
[2025-07-25 17:12:50] drwx------ 4 boincer umatlas      4096 Jul 25 15:57 pilot3
[2025-07-25 17:12:50] -rw-r--r-- 1 boincer umatlas      5869 Jul 25 17:10 init_data.xml
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas 209831812 Jul 25 17:11 HITS.45743349._019202.pool.root.1
[2025-07-25 17:12:50] -rw-r--r-- 1 boincer umatlas       529 Jul 25 17:12 boinc_task_state.xml
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas      1050 Jul 25 17:12 memory_monitor_summary.json
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas    359051 Jul 25 17:12 log.45743349._019202.job.log.tgz.1
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas        95 Jul 25 17:12 pilot_heartbeat.json
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas      7848 Jul 25 17:12 heartbeat.json
[2025-07-25 17:12:50] -rw-r--r-- 1 boincer umatlas        27 Jul 25 17:12 wrapper_checkpoint.txt
[2025-07-25 17:12:50] -rw-r--r-- 1 boincer umatlas      8192 Jul 25 17:12 boinc_mmap_file
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas      4480 Jul 25 17:12 pilotlog.txt
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas    432537 Jul 25 17:12 log.45743349._019202.job.log.1
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas       357 Jul 25 17:12 output.list
[2025-07-25 17:12:50] -rw-r--r-- 1 boincer umatlas       620 Jul 25 17:12 runtime_log
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas    808960 Jul 25 17:12 result.tar.gz
[2025-07-25 17:12:50] -rw-r--r-- 1 boincer umatlas      8662 Jul 25 17:12 runtime_log.err
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas       659 Jul 25 17:12 13QMDmBxTz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmclyKDmHrcMTm.diag
[2025-07-25 17:12:50] -rw-r--r-- 1 boincer umatlas     21767 Jul 25 17:12 stderr.txt
[2025-07-25 17:12:50] HITS file was successfully produced:
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas 209831812 Jul 25 17:11 shared/HITS.pool.root.1
[2025-07-25 17:12:50]  *** Contents of shared directory: ***
[2025-07-25 17:12:50] total 348632
[2025-07-25 17:12:50] -rw-r--r-- 2 boincer umatlas 145786598 Jul 25 15:57 ATLAS.root_0
[2025-07-25 17:12:50] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 15:57 start_atlas.sh
[2025-07-25 17:12:50] -rw-r--r-- 2 boincer umatlas    542885 Jul 25 15:57 input.tar.gz
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas 209831812 Jul 25 17:11 HITS.pool.root.1
[2025-07-25 17:12:50] -rw------- 1 boincer umatlas    808960 Jul 25 17:12 result.tar.gz
17:12:52 (12712): run_atlas exited; CPU time 47511.003679
17:12:52 (12712): called boinc_finish(0)

</stderr_txt>
]]>

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