Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:47:39 (27415): wrapper (7.7.26015): starting
15:47:39 (27415): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 15:47:39] Arguments: --nthreads 12
[2025-07-25 15:47:39] Threads: 12
[2025-07-25 15:47:39] Checking for CVMFS
[2025-07-25 15:47:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 15:47:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 15:47:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 15:47:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 15:47:40] 2.11.2.0 3035 109515 96512 148751 2 56 14543523 20275200 1 130560 0 35632508 99.970 10051527 11056 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 15:47:40] CVMFS is ok
[2025-07-25 15:47:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 15:47:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 15:47:40] Further information can be found at the LHC@home message board.
[2025-07-25 15:47:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 15:47:40] Checking for apptainer binary...
[2025-07-25 15:47:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 15:47:40] Running /usr/bin/apptainer --version
[2025-07-25 15:47:40] apptainer version 1.3.2-1.el7
[2025-07-25 15:47:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 15:47:41] c-205-31.aglt2.org
[2025-07-25 15:47:41] apptainer works
[2025-07-25 15:47:41] Set ATHENA_PROC_NUMBER=12
[2025-07-25 15:47:41] Set ATHENA_CORE_NUMBER=12
[2025-07-25 15:47:41] Starting ATLAS job with PandaID=6745055880
[2025-07-25 15:47:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 17:11:11]  *** The last 200 lines of the pilot log: ***
[2025-07-25 17:11:11]  is_tar=False
[2025-07-25 17:11:11]  lfn=log.45743349._022054.job.log.tgz.1
[2025-07-25 17:11:11]  mtime=0
[2025-07-25 17:11:11]  protocol_id=None
[2025-07-25 17:11:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 17:11:11]  replicas=None
[2025-07-25 17:11:11]  scope=mc23_13p6TeV
[2025-07-25 17:11:11]  status=None
[2025-07-25 17:11:11]  status_code=0
[2025-07-25 17:11:11]  storage_token=
[2025-07-25 17:11:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745055880/log.45743349._022054.job.log.tgz.1
[2025-07-25 17:11:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/40/log.45743349._022054.job.log.tgz.1
[2025-07-25 17:11:11]  workdir=None
[2025-07-25 17:11:11] ]
[2025-07-25 17:11:11] 2025-07-25 21:10:32,614 | INFO     | transferring file log.45743349._022054.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745055880/log.45743349._022054.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 17:11:11] 2025-07-25 21:10:32,615 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745055880/log.45743349._022054.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._022054.job
[2025-07-25 17:11:11] 2025-07-25 21:10:32,637 | INFO     | adding to output.list: log.45743349._022054.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/40/log.45743349._022054.job.log.tg
[2025-07-25 17:11:11] 2025-07-25 21:10:32,638 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 17:11:11] 2025-07-25 21:10:32,638 | INFO     | summary of transferred files:
[2025-07-25 17:11:11] 2025-07-25 21:10:32,638 | INFO     |  -- lfn=log.45743349._022054.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 17:11:11] 2025-07-25 21:10:32,639 | INFO     | stage-out finished correctly
[2025-07-25 17:11:11] 2025-07-25 21:10:33,623 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 17:11:11] 2025-07-25 21:10:34,597 | INFO     | job 6745055880 has state=finished
[2025-07-25 17:11:11] 2025-07-25 21:10:34,597 | INFO     | preparing for final server update for job 6745055880 in state='finished'
[2025-07-25 17:11:11] 2025-07-25 21:10:34,598 | INFO     | this job has now completed (state=finished)
[2025-07-25 17:11:11] 2025-07-25 21:10:34,598 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 17:11:11] 2025-07-25 21:10:34,598 | INFO     | log transfer has been attempted: DONE
[2025-07-25 17:11:11] 2025-07-25 21:10:34,598 | INFO     | job 6745055880 has finished - writing final server update
[2025-07-25 17:11:11] 2025-07-25 21:10:34,599 | INFO     | total number of processed events: 400 (read)
[2025-07-25 17:11:11] 2025-07-25 21:10:34,599 | INFO     | executing command: lscpu
[2025-07-25 17:11:11] 2025-07-25 21:10:34,626 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 17:11:11] 2025-07-25 21:10:35,609 | WARNING  | process 5191 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 17:11:11] 2025-07-25 21:10:35,609 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745055880/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 17:11:11] 2025-07-25 21:10:35,697 | INFO     | number of running child processes to parent process 5191: 1
[2025-07-25 17:11:11] 2025-07-25 21:10:35,697 | INFO     | maximum number of monitored processes: 6
[2025-07-25 17:11:11] 2025-07-25 21:10:38,200 | INFO     | monitor loop #370: job 0:6745055880 is in state 'finished'
[2025-07-25 17:11:11] 2025-07-25 21:10:38,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 17:11:11] 2025-07-25 21:10:39,558 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-25 17:11:11] 2025-07-25 21:10:39,562 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-07-25 17:11:11] 2025-07-25 21:10:39,565 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745055880/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 17:11:11] 2025-07-25 21:10:39,565 | INFO     | extracted standard info from prmon json
[2025-07-25 17:11:11] 2025-07-25 21:10:39,565 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 17:11:11] 2025-07-25 21:10:39,565 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 17:11:11] 2025-07-25 21:10:39,566 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 17:11:11] 2025-07-25 21:10:39,566 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 17:11:11] 2025-07-25 21:10:39,567 | INFO     | fitting pss+swap vs Time
[2025-07-25 17:11:11] 2025-07-25 21:10:39,568 | INFO     | sum of square deviations: 125630262.5
[2025-07-25 17:11:11] 2025-07-25 21:10:39,568 | INFO     | sum of deviations: -7814197996.5
[2025-07-25 17:11:11] 2025-07-25 21:10:39,568 | INFO     | mean x: 1753475437.5
[2025-07-25 17:11:11] 2025-07-25 21:10:39,568 | INFO     | mean y: 2757007.608108108
[2025-07-25 17:11:11] 2025-07-25 21:10:39,568 | INFO     | -- intersect: 109068868770.48419
[2025-07-25 17:11:11] 2025-07-25 21:10:39,568 | INFO     | intersect: 109068868770.48419
[2025-07-25 17:11:11] 2025-07-25 21:10:39,569 | INFO     | chi2: 0.06750470014709747
[2025-07-25 17:11:11] 2025-07-25 21:10:39,569 | INFO     | -- intersect: 109068868770.48419
[2025-07-25 17:11:11] 2025-07-25 21:10:39,569 | INFO     | current memory leak: -62.20 B/s (using 74 data points, chi2=0.07)
[2025-07-25 17:11:11] 2025-07-25 21:10:39,569 | INFO     | could have reported an average CPU frequency of 2069 MHz (6 samples)
[2025-07-25 17:11:11] 2025-07-25 21:10:39,569 | INFO     | ..............................
[2025-07-25 17:11:11] 2025-07-25 21:10:39,569 | INFO     | . Timing measurements:
[2025-07-25 17:11:11] 2025-07-25 21:10:39,570 | INFO     | . get job = 0 s
[2025-07-25 17:11:11] 2025-07-25 21:10:39,570 | INFO     | . initial setup = 2 s
[2025-07-25 17:11:11] 2025-07-25 21:10:39,570 | INFO     | . payload setup = 9 s
[2025-07-25 17:11:11] 2025-07-25 21:10:39,570 | INFO     | . stage-in = 0 s
[2025-07-25 17:11:11] 2025-07-25 21:10:39,570 | INFO     | . payload execution = 4926 s
[2025-07-25 17:11:11] 2025-07-25 21:10:39,570 | INFO     | . stage-out = 0 s
[2025-07-25 17:11:11] 2025-07-25 21:10:39,570 | INFO     | . log creation = 0 s
[2025-07-25 17:11:11] 2025-07-25 21:10:39,570 | INFO     | ..............................
[2025-07-25 17:11:11] 2025-07-25 21:10:39,654 | INFO     | 
[2025-07-25 17:11:11] 2025-07-25 21:10:39,654 | INFO     | job summary report
[2025-07-25 17:11:11] 2025-07-25 21:10:39,654 | INFO     | --------------------------------------------------
[2025-07-25 17:11:11] 2025-07-25 21:10:39,654 | INFO     | PanDA job id: 6745055880
[2025-07-25 17:11:11] 2025-07-25 21:10:39,654 | INFO     | task id: 45743349
[2025-07-25 17:11:11] 2025-07-25 21:10:39,655 | INFO     | errors: (none)
[2025-07-25 17:11:11] 2025-07-25 21:10:39,655 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 17:11:11] 2025-07-25 21:10:39,655 | INFO     | pilot state: finished 
[2025-07-25 17:11:11] 2025-07-25 21:10:39,655 | INFO     | transexitcode: 0
[2025-07-25 17:11:11] 2025-07-25 21:10:39,655 | INFO     | exeerrorcode: 0
[2025-07-25 17:11:11] 2025-07-25 21:10:39,655 | INFO     | exeerrordiag: 
[2025-07-25 17:11:11] 2025-07-25 21:10:39,656 | INFO     | exitcode: 0
[2025-07-25 17:11:11] 2025-07-25 21:10:39,656 | INFO     | exitmsg: OK
[2025-07-25 17:11:11] 2025-07-25 21:10:39,656 | INFO     | cpuconsumptiontime: 53661 s
[2025-07-25 17:11:11] 2025-07-25 21:10:39,656 | INFO     | nevents: 400
[2025-07-25 17:11:11] 2025-07-25 21:10:39,656 | INFO     | neventsw: 0
[2025-07-25 17:11:11] 2025-07-25 21:10:39,656 | INFO     | pid: 5191
[2025-07-25 17:11:11] 2025-07-25 21:10:39,656 | INFO     | pgrp: 5191
[2025-07-25 17:11:11] 2025-07-25 21:10:39,657 | INFO     | corecount: 12
[2025-07-25 17:11:11] 2025-07-25 21:10:39,657 | INFO     | event service: False
[2025-07-25 17:11:11] 2025-07-25 21:10:39,657 | INFO     | sizes: {0: 2397302, 1: 2397501, 6: 2397763, 11: 2397791, 4939: 2424184, 4940: 2424183, 4942: 2433365, 4943: 2433421, 4949: 2433615}
[2025-07-25 17:11:11] 2025-07-25 21:10:39,657 | INFO     | --------------------------------------------------
[2025-07-25 17:11:11] 2025-07-25 21:10:39,657 | INFO     | 
[2025-07-25 17:11:11] 2025-07-25 21:10:39,658 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 17:11:11] 2025-07-25 21:10:39,683 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,684 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,684 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,684 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,684 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,684 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,685 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,685 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,685 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,685 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,685 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,685 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,685 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,686 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,686 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,686 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,686 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 17:11:11] 2025-07-25 21:10:39,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,686 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 17:11:11] 2025-07-25 21:10:39,687 | INFO     | job 6745055880 has completed (purged errors)
[2025-07-25 17:11:11] 2025-07-25 21:10:39,687 | INFO     | overall cleanup function is called
[2025-07-25 17:11:11] 2025-07-25 21:10:40,695 | INFO     | --- collectZombieJob: --- 10, [5191]
[2025-07-25 17:11:11] 2025-07-25 21:10:40,695 | INFO     | zombie collector waiting for pid 5191
[2025-07-25 17:11:11] 2025-07-25 21:10:40,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 17:11:11] 2025-07-25 21:10:40,695 | INFO     | collected zombie processes
[2025-07-25 17:11:11] 2025-07-25 21:10:40,695 | INFO     | will attempt to kill all subprocesses of pid=5191
[2025-07-25 17:11:11] 2025-07-25 21:10:40,788 | INFO     | process IDs to be killed: [5191] (in reverse order)
[2025-07-25 17:11:11] 2025-07-25 21:10:40,843 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 17:11:11] 2025-07-25 21:10:40,843 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 17:11:11] 2025-07-25 21:10:40,846 | INFO     | did not find any defunct processes belonging to 5191
[2025-07-25 17:11:11] 2025-07-25 21:10:40,848 | INFO     | did not find any defunct processes belonging to 5191
[2025-07-25 17:11:11] 2025-07-25 21:10:40,849 | INFO     | ready for new job
[2025-07-25 17:11:11] 2025-07-25 21:10:40,849 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 17:11:11] 2025-07-25 21:10:40,850 | INFO     | ***************************************
[2025-07-25 17:11:11] 2025-07-25 21:10:40,850 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 17:11:11] 2025-07-25 21:10:40,850 | INFO     | ***************************************
[2025-07-25 17:11:11] 2025-07-25 21:10:40,850 | INFO     | 
[2025-07-25 17:11:11] 2025-07-25 21:10:40,851 | INFO     | architecture information:
[2025-07-25 17:11:11] 2025-07-25 21:10:40,851 | INFO     | executing command: cat /etc/os-release
[2025-07-25 17:11:11] 2025-07-25 21:10:40,866 | INFO     | cat /etc/os-release:
[2025-07-25 17:11:11] NAME="CentOS Linux"
[2025-07-25 17:11:11] VERSION="7 (Core)"
[2025-07-25 17:11:11] ID="centos"
[2025-07-25 17:11:11] ID_LIKE="rhel fedora"
[2025-07-25 17:11:11] VERSION_ID="7"
[2025-07-25 17:11:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 17:11:11] ANSI_COLOR="0;31"
[2025-07-25 17:11:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 17:11:11] HOME_URL="https://www.centos.org/"
[2025-07-25 17:11:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 17:11:11] 
[2025-07-25 17:11:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 17:11:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 17:11:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 17:11:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 17:11:11] 
[2025-07-25 17:11:11] 2025-07-25 21:10:40,866 | INFO     | ***************************************
[2025-07-25 17:11:11] 2025-07-25 21:10:41,369 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 17:11:11] 2025-07-25 21:10:41,386 | INFO     | sufficient remaining disk space (29353836544 B)
[2025-07-25 17:11:11] 2025-07-25 21:10:41,386 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 17:11:11] 2025-07-25 21:10:41,387 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 17:11:11] 2025-07-25 21:10:41,387 | INFO     | update_server=False
[2025-07-25 17:11:11] 2025-07-25 21:10:41,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 17:11:11] 2025-07-25 21:10:41,387 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 17:11:11] 2025-07-25 21:10:41,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 17:11:11] 2025-07-25 21:10:41,614 | INFO     | all payload control threads have been joined
[2025-07-25 17:11:11] 2025-07-25 21:10:41,706 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 17:11:11] 2025-07-25 21:10:41,707 | INFO     | aborting loop
[2025-07-25 17:11:11] 2025-07-25 21:10:41,850 | INFO     | all data control threads have been joined
[2025-07-25 17:11:11] 2025-07-25 21:10:42,388 | INFO     | [job] retrieve thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:42,394 | INFO     | [job] queue monitor thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:42,432 | INFO     | [data] copytool_in thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:42,619 | INFO     | [payload] control thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:42,712 | INFO     | [job] job monitor thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:42,853 | INFO     | [data] control thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:42,881 | INFO     | all job control threads have been joined
[2025-07-25 17:11:11] 2025-07-25 21:10:42,984 | INFO     | [payload] validate_post thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:43,162 | INFO     | [job] validate thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:43,200 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:43,273 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:43,393 | INFO     | [data] copytool_out thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:43,441 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:43,504 | INFO     | [payload] failed_post thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:43,887 | INFO     | [job] control thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:44,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 17:11:11] 2025-07-25 21:10:48,222 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:51,627 | INFO     | job.realtimelogging is not enabled
[2025-07-25 17:11:11] 2025-07-25 21:10:52,632 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 17:11:11] 2025-07-25 21:10:52,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957438564160)>', '<ExcThread(monitor, started 139956341176064)>']
[2025-07-25 17:11:11] 2025-07-25 21:10:57,970 | INFO     | all workflow threads have been joined
[2025-07-25 17:11:11] 2025-07-25 21:10:57,970 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 17:11:11] 2025-07-25 21:10:57,971 | INFO     | traces error code: 0
[2025-07-25 17:11:11] 2025-07-25 21:10:57,971 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 17:11:11] 2025-07-25 21:11:10,891 | INFO     | PID=31007 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 17:11:11] 2025-07-25 21:11:10,892 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 17:11:11] 2025-07-25 21:11:10,892 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 17:11:11] 2025-07-25 21:11:10,892 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 17:11:11] 2025-07-25 21:11:10,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 17:11:11] 2025-07-25 21:11:10,893 | INFO     | [monitor] control thread has ended
[2025-07-25 17:11:11] 2025-07-25 21:11:10,985 [wrapper] ==== pilot stdout END ====
[2025-07-25 17:11:11] 2025-07-25 21:11:10,989 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 17:11:11] 2025-07-25 21:11:10,992 [wrapper] pilotpid: 31007
[2025-07-25 17:11:11] 2025-07-25 21:11:10,996 [wrapper] Pilot exit status: 0
[2025-07-25 17:11:11] 2025-07-25 21:11:11,010 [wrapper] pandaids: 6745055880
[2025-07-25 17:11:11] 2025-07-25 21:11:11,050 [wrapper] cleanup supervisor_pilot 29187 31008
[2025-07-25 17:11:11] 2025-07-25 21:11:11,054 [wrapper] Test setup, not cleaning
[2025-07-25 17:11:11] 2025-07-25 21:11:11,058 [wrapper] apfmon messages muted
[2025-07-25 17:11:11] 2025-07-25 21:11:11,062 [wrapper] ==== wrapper stdout END ====
[2025-07-25 17:11:11] 2025-07-25 21:11:11,066 [wrapper] ==== wrapper stderr END ====
[2025-07-25 17:11:11]  *** Error codes and diagnostics ***
[2025-07-25 17:11:11]     "exeErrorCode": 0,
[2025-07-25 17:11:11]     "exeErrorDiag": "",
[2025-07-25 17:11:11]     "pilotErrorCode": 0,
[2025-07-25 17:11:11]     "pilotErrorDiag": "",
[2025-07-25 17:11:11]  *** Listing of results directory ***
[2025-07-25 17:11:11] total 429904
[2025-07-25 17:11:11] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 09:22 pilot3.tar.gz
[2025-07-25 17:11:11] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 09:43 queuedata.json
[2025-07-25 17:11:11] -rwx------ 1 boincer umatlas     36292 Jul 25 09:48 runpilot2-wrapper.sh
[2025-07-25 17:11:11] -rw-r--r-- 1 boincer umatlas       100 Jul 25 15:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 17:11:11] -rwxr-xr-x 1 boincer umatlas      7986 Jul 25 15:47 run_atlas
[2025-07-25 17:11:11] -rw-r--r-- 1 boincer umatlas       105 Jul 25 15:47 job.xml
[2025-07-25 17:11:11] -rw-r--r-- 2 boincer umatlas 228175859 Jul 25 15:47 EVNT.45743347._001256.pool.root.1
[2025-07-25 17:11:11] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 15:47 start_atlas.sh
[2025-07-25 17:11:11] drwxrwx--x 2 boincer umatlas      4096 Jul 25 15:47 shared
[2025-07-25 17:11:11] -rw-r--r-- 2 boincer umatlas    542890 Jul 25 15:47 input.tar.gz
[2025-07-25 17:11:11] -rw-r--r-- 1 boincer umatlas         0 Jul 25 15:47 boinc_lockfile
[2025-07-25 17:11:11] -rw-r--r-- 1 boincer umatlas      2562 Jul 25 15:47 pandaJob.out
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas    979993 Jul 25 15:47 agis_schedconf.cvmfs.json
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas   1593052 Jul 25 15:47 agis_ddmendpoints.agis.ALL.json
[2025-07-25 17:11:11] drwx------ 4 boincer umatlas      4096 Jul 25 15:47 pilot3
[2025-07-25 17:11:11] -rw-r--r-- 1 boincer umatlas      5868 Jul 25 17:09 init_data.xml
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas 206495235 Jul 25 17:09 HITS.45743349._022054.pool.root.1
[2025-07-25 17:11:11] -rw-r--r-- 1 boincer umatlas       529 Jul 25 17:10 boinc_task_state.xml
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas      1048 Jul 25 17:10 memory_monitor_summary.json
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas    370715 Jul 25 17:10 log.45743349._022054.job.log.tgz.1
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas      7852 Jul 25 17:10 heartbeat.json
[2025-07-25 17:11:11] -rw-r--r-- 1 boincer umatlas        27 Jul 25 17:10 wrapper_checkpoint.txt
[2025-07-25 17:11:11] -rw-r--r-- 1 boincer umatlas      8192 Jul 25 17:10 boinc_mmap_file
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas        95 Jul 25 17:11 pilot_heartbeat.json
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas       745 Jul 25 17:11 pilotlog.txt
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas    470978 Jul 25 17:11 log.45743349._022054.job.log.1
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas       357 Jul 25 17:11 output.list
[2025-07-25 17:11:11] -rw-r--r-- 1 boincer umatlas       620 Jul 25 17:11 runtime_log
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas    860160 Jul 25 17:11 result.tar.gz
[2025-07-25 17:11:11] -rw-r--r-- 1 boincer umatlas      8662 Jul 25 17:11 runtime_log.err
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas       659 Jul 25 17:11 rBHMDmbxXz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHgPLDmR0ICnm.diag
[2025-07-25 17:11:11] -rw-r--r-- 1 boincer umatlas     21569 Jul 25 17:11 stderr.txt
[2025-07-25 17:11:11] HITS file was successfully produced:
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas 206495235 Jul 25 17:09 shared/HITS.pool.root.1
[2025-07-25 17:11:11]  *** Contents of shared directory: ***
[2025-07-25 17:11:11] total 425876
[2025-07-25 17:11:11] -rw-r--r-- 2 boincer umatlas 228175859 Jul 25 15:47 ATLAS.root_0
[2025-07-25 17:11:11] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 15:47 start_atlas.sh
[2025-07-25 17:11:11] -rw-r--r-- 2 boincer umatlas    542890 Jul 25 15:47 input.tar.gz
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas 206495235 Jul 25 17:09 HITS.pool.root.1
[2025-07-25 17:11:11] -rw------- 1 boincer umatlas    860160 Jul 25 17:11 result.tar.gz
17:11:12 (27415): run_atlas exited; CPU time 53626.448713
17:11:12 (27415): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN