Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:13:17 (2221282): wrapper (7.7.26015): starting
10:13:17 (2221282): wrapper: running run_atlas (--nthreads 3)
[2025-07-26 10:13:17] Arguments: --nthreads 3
[2025-07-26 10:13:17] Threads: 3
[2025-07-26 10:13:17] Checking for CVMFS
[2025-07-26 10:13:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 10:13:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 10:13:17] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 10:13:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 10:13:17] 2.9.2.0 685657 6470 72552 148768 0 57 35669727 36864001 0 130560 0 4010614 99.987 241499 3406 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-26 10:13:17] CVMFS is ok
[2025-07-26 10:13:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 10:13:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 10:13:17] Further information can be found at the LHC@home message board.
[2025-07-26 10:13:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 10:13:17] Checking for apptainer binary...
[2025-07-26 10:13:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 10:13:17] Running /usr/bin/apptainer --version
[2025-07-26 10:13:17] apptainer version 1.4.1-1.1
[2025-07-26 10:13:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 10:13:17] thA333
[2025-07-26 10:13:17] apptainer works
[2025-07-26 10:13:17] Set ATHENA_PROC_NUMBER=3
[2025-07-26 10:13:17] Set ATHENA_CORE_NUMBER=3
[2025-07-26 10:13:17] Starting ATLAS job with PandaID=6745055838
[2025-07-26 10:13:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 11:55:00]  *** The last 200 lines of the pilot log: ***
[2025-07-26 11:55:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-26 11:55:00]  is_altstaged=None
[2025-07-26 11:55:00]  is_tar=False
[2025-07-26 11:55:00]  lfn=log.45743349._022012.job.log.tgz.1
[2025-07-26 11:55:00]  mtime=0
[2025-07-26 11:55:00]  protocol_id=None
[2025-07-26 11:55:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 11:55:00]  replicas=None
[2025-07-26 11:55:00]  scope=mc23_13p6TeV
[2025-07-26 11:55:00]  status=None
[2025-07-26 11:55:00]  status_code=0
[2025-07-26 11:55:00]  storage_token=
[2025-07-26 11:55:00]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745055838/log.45743349._022012.job.log.tgz.1
[2025-07-26 11:55:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/90/log.45743349._022012.job.log.tgz.1
[2025-07-26 11:55:00]  workdir=None
[2025-07-26 11:55:00] ]
[2025-07-26 11:55:00] 2025-07-26 09:54:34,985 | INFO     | transferring file log.45743349._022012.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745055838/log.45743349._022012.job.log.tgz.1 to /local/data/boinc/
[2025-07-26 11:55:00] 2025-07-26 09:54:34,985 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745055838/log.45743349._022012.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0220
[2025-07-26 11:55:00] 2025-07-26 09:54:34,997 | INFO     | adding to output.list: log.45743349._022012.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/90/log.45743349._022012.job.log.tg
[2025-07-26 11:55:00] 2025-07-26 09:54:34,997 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 11:55:00] 2025-07-26 09:54:34,997 | INFO     | summary of transferred files:
[2025-07-26 11:55:00] 2025-07-26 09:54:34,997 | INFO     |  -- lfn=log.45743349._022012.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 11:55:00] 2025-07-26 09:54:34,997 | INFO     | stage-out finished correctly
[2025-07-26 11:55:00] 2025-07-26 09:54:35,028 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 11:55:00] 2025-07-26 09:54:36,633 | INFO     | monitor loop #467: job 0:6745055838 is in state 'finished'
[2025-07-26 11:55:00] 2025-07-26 09:54:36,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 11:55:00] 2025-07-26 09:54:37,384 | INFO     | job 6745055838 has state=finished
[2025-07-26 11:55:00] 2025-07-26 09:54:37,384 | INFO     | preparing for final server update for job 6745055838 in state='finished'
[2025-07-26 11:55:00] 2025-07-26 09:54:37,385 | INFO     | this job has now completed (state=finished)
[2025-07-26 11:55:00] 2025-07-26 09:54:37,385 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 11:55:00] 2025-07-26 09:54:37,385 | INFO     | log transfer has been attempted: DONE
[2025-07-26 11:55:00] 2025-07-26 09:54:37,386 | INFO     | job 6745055838 has finished - writing final server update
[2025-07-26 11:55:00] 2025-07-26 09:54:37,386 | INFO     | total number of processed events: 400 (read)
[2025-07-26 11:55:00] 2025-07-26 09:54:37,388 | INFO     | executing command: lscpu
[2025-07-26 11:55:00] 2025-07-26 09:54:37,403 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 11:55:00] 2025-07-26 09:54:39,136 | INFO     | monitor loop #468: job 0:6745055838 is in state 'finished'
[2025-07-26 11:55:00] 2025-07-26 09:54:39,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 11:55:00] 2025-07-26 09:54:41,311 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 11:55:00] 2025-07-26 09:54:41,312 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4008.846333333333
[2025-07-26 11:55:00] 2025-07-26 09:54:41,313 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745055838/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 11:55:00] 2025-07-26 09:54:41,313 | INFO     | extracted standard info from prmon json
[2025-07-26 11:55:00] 2025-07-26 09:54:41,313 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 11:55:00] 2025-07-26 09:54:41,313 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 11:55:00] 2025-07-26 09:54:41,314 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 11:55:00] 2025-07-26 09:54:41,314 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 11:55:00] 2025-07-26 09:54:41,314 | INFO     | fitting pss+swap vs Time
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | sum of square deviations: 241429643.0
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | sum of deviations: -11160534135.999998
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | mean x: 1753520714.5
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | mean y: 2409313.4782608696
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | -- intersect: 81062164649.1574
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | intersect: 81062164649.1574
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | chi2: 0.06098660995643471
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | -- intersect: 81062164649.1574
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | current memory leak: -46.23 B/s (using 92 data points, chi2=0.06)
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | could have reported an average CPU frequency of 4275 MHz (7 samples)
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | ..............................
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | . Timing measurements:
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | . get job = 0 s
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | . initial setup = 1 s
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | . payload setup = 6 s
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | . stage-in = 0 s
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | . payload execution = 6039 s
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | . stage-out = 0 s
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | . log creation = 0 s
[2025-07-26 11:55:00] 2025-07-26 09:54:41,315 | INFO     | ..............................
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | 
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | job summary report
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | --------------------------------------------------
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | PanDA job id: 6745055838
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | task id: 45743349
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | errors: (none)
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | pilot state: finished 
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | transexitcode: 0
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | exeerrorcode: 0
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | exeerrordiag: 
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | exitcode: 0
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | exitmsg: OK
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | cpuconsumptiontime: 17509 s
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | nevents: 400
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | neventsw: 0
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | pid: 2231436
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | pgrp: 2231436
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | corecount: 3
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | event service: False
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | sizes: {0: 2396639, 1: 2397498, 7: 2397760, 11: 2397788, 6048: 2424812, 6049: 2424811, 6050: 2434055, 6056: 2434193}
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | --------------------------------------------------
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | 
[2025-07-26 11:55:00] 2025-07-26 09:54:41,348 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,360 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 11:55:00] 2025-07-26 09:54:41,361 | INFO     | job 6745055838 has completed (purged errors)
[2025-07-26 11:55:00] 2025-07-26 09:54:41,361 | INFO     | overall cleanup function is called
[2025-07-26 11:55:00] 2025-07-26 09:54:42,367 | INFO     | --- collectZombieJob: --- 10, [2231436]
[2025-07-26 11:55:00] 2025-07-26 09:54:42,367 | INFO     | zombie collector waiting for pid 2231436
[2025-07-26 11:55:00] 2025-07-26 09:54:42,367 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 11:55:00] 2025-07-26 09:54:42,368 | INFO     | collected zombie processes
[2025-07-26 11:55:00] 2025-07-26 09:54:42,368 | INFO     | will attempt to kill all subprocesses of pid=2231436
[2025-07-26 11:55:00] 2025-07-26 09:54:42,405 | INFO     | process IDs to be killed: [2231436] (in reverse order)
[2025-07-26 11:55:00] 2025-07-26 09:54:42,426 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 11:55:00] 2025-07-26 09:54:42,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 11:55:00] 2025-07-26 09:54:42,428 | INFO     | did not find any defunct processes belonging to 2231436
[2025-07-26 11:55:00] 2025-07-26 09:54:42,429 | INFO     | did not find any defunct processes belonging to 2231436
[2025-07-26 11:55:00] 2025-07-26 09:54:42,429 | INFO     | ready for new job
[2025-07-26 11:55:00] 2025-07-26 09:54:42,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 11:55:00] 2025-07-26 09:54:42,429 | INFO     | ***************************************
[2025-07-26 11:55:00] 2025-07-26 09:54:42,429 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 11:55:00] 2025-07-26 09:54:42,429 | INFO     | ***************************************
[2025-07-26 11:55:00] 2025-07-26 09:54:42,429 | INFO     | 
[2025-07-26 11:55:00] 2025-07-26 09:54:42,430 | INFO     | architecture information:
[2025-07-26 11:55:00] 2025-07-26 09:54:42,430 | INFO     | executing command: cat /etc/os-release
[2025-07-26 11:55:00] 2025-07-26 09:54:42,439 | INFO     | cat /etc/os-release:
[2025-07-26 11:55:00] NAME="CentOS Linux"
[2025-07-26 11:55:00] VERSION="7 (Core)"
[2025-07-26 11:55:00] ID="centos"
[2025-07-26 11:55:00] ID_LIKE="rhel fedora"
[2025-07-26 11:55:00] VERSION_ID="7"
[2025-07-26 11:55:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 11:55:00] ANSI_COLOR="0;31"
[2025-07-26 11:55:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 11:55:00] HOME_URL="https://www.centos.org/"
[2025-07-26 11:55:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 11:55:00] 
[2025-07-26 11:55:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 11:55:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 11:55:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 11:55:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 11:55:00] 
[2025-07-26 11:55:00] 2025-07-26 09:54:42,440 | INFO     | ***************************************
[2025-07-26 11:55:00] 2025-07-26 09:54:42,943 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-26 11:55:00] 2025-07-26 09:54:42,955 | INFO     | sufficient remaining disk space (219418722304 B)
[2025-07-26 11:55:00] 2025-07-26 09:54:42,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 11:55:00] 2025-07-26 09:54:42,956 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 11:55:00] 2025-07-26 09:54:42,956 | INFO     | update_server=False
[2025-07-26 11:55:00] 2025-07-26 09:54:42,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 11:55:00] 2025-07-26 09:54:42,956 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 11:55:00] 2025-07-26 09:54:42,956 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 11:55:00] 2025-07-26 09:54:42,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 11:55:00] 2025-07-26 09:54:42,956 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 11:55:00] 2025-07-26 09:54:42,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 11:55:00] 2025-07-26 09:54:42,956 | INFO     | aborting loop
[2025-07-26 11:55:00] 2025-07-26 09:54:42,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 11:55:00] 2025-07-26 09:54:43,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 11:55:00] 2025-07-26 09:54:43,112 | INFO     | all data control threads have been joined
[2025-07-26 11:55:00] 2025-07-26 09:54:43,626 | INFO     | all payload control threads have been joined
[2025-07-26 11:55:00] 2025-07-26 09:54:43,961 | INFO     | [job] retrieve thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:43,962 | INFO     | [job] job monitor thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:43,962 | INFO     | [job] queue monitor thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:44,107 | INFO     | [payload] validate_post thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:44,118 | INFO     | [data] control thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:44,622 | INFO     | all job control threads have been joined
[2025-07-26 11:55:00] 2025-07-26 09:54:44,632 | INFO     | [payload] control thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:44,640 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:44,763 | INFO     | [job] validate thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:44,764 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:44,805 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:45,048 | INFO     | [data] copytool_out thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:45,163 | INFO     | [payload] failed_post thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:45,376 | INFO     | [data] copytool_in thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:45,569 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 11:55:00] 2025-07-26 09:54:45,628 | INFO     | [job] control thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:49,576 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:53,798 | INFO     | job.realtimelogging is not enabled
[2025-07-26 11:55:00] 2025-07-26 09:54:54,804 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 11:55:00] 2025-07-26 09:54:55,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140692326119232)>', '<ExcThread(monitor, started 140691678144256)>']
[2025-07-26 11:55:00] 2025-07-26 09:54:56,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 11:55:00] 2025-07-26 09:54:56,024 | INFO     | [monitor] control thread has ended
[2025-07-26 11:55:00] 2025-07-26 09:55:00,138 | INFO     | all workflow threads have been joined
[2025-07-26 11:55:00] 2025-07-26 09:55:00,138 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 11:55:00] 2025-07-26 09:55:00,138 | INFO     | traces error code: 0
[2025-07-26 11:55:00] 2025-07-26 09:55:00,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 11:55:00] 2025-07-26 09:55:00,180 [wrapper] ==== pilot stdout END ====
[2025-07-26 11:55:00] 2025-07-26 09:55:00,183 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 11:55:00] 2025-07-26 09:55:00,185 [wrapper] pilotpid: 2224921
[2025-07-26 11:55:00] 2025-07-26 09:55:00,188 [wrapper] Pilot exit status: 0
[2025-07-26 11:55:00] 2025-07-26 09:55:00,196 [wrapper] pandaids: 6745055838
[2025-07-26 11:55:00] 2025-07-26 09:55:00,211 [wrapper] cleanup supervisor_pilot 2243778 2224922
[2025-07-26 11:55:00] 2025-07-26 09:55:00,214 [wrapper] Test setup, not cleaning
[2025-07-26 11:55:00] 2025-07-26 09:55:00,216 [wrapper] apfmon messages muted
[2025-07-26 11:55:00] 2025-07-26 09:55:00,219 [wrapper] ==== wrapper stdout END ====
[2025-07-26 11:55:00] 2025-07-26 09:55:00,221 [wrapper] ==== wrapper stderr END ====
[2025-07-26 11:55:00]  *** Error codes and diagnostics ***
[2025-07-26 11:55:00]     "exeErrorCode": 0,
[2025-07-26 11:55:00]     "exeErrorDiag": "",
[2025-07-26 11:55:00]     "pilotErrorCode": 0,
[2025-07-26 11:55:00]     "pilotErrorDiag": "",
[2025-07-26 11:55:00]  *** Listing of results directory ***
[2025-07-26 11:55:00] total 434392
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc    530466 Jul 25 15:22 pilot3.tar.gz
[2025-07-26 11:55:00] -rwx------ 1 boinc boinc     36292 Jul 25 15:42 runpilot2-wrapper.sh
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc      5112 Jul 25 15:42 queuedata.json
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc       100 Jul 26 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 11:55:00] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 10:13 run_atlas
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc       105 Jul 26 10:13 job.xml
[2025-07-26 11:55:00] -rw-r--r-- 2 boinc boinc 231318604 Jul 26 10:13 EVNT.45743347._001255.pool.root.1
[2025-07-26 11:55:00] -rw-r--r-- 2 boinc boinc    542884 Jul 26 10:13 input.tar.gz
[2025-07-26 11:55:00] -rw-r--r-- 2 boinc boinc     15095 Jul 26 10:13 start_atlas.sh
[2025-07-26 11:55:00] drwxrwx--x 2 boinc boinc      4096 Jul 26 10:13 shared
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc         0 Jul 26 10:13 boinc_setup_complete
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc      6199 Jul 26 10:13 init_data.xml
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc         0 Jul 26 10:13 boinc_lockfile
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc      2559 Jul 26 10:13 pandaJob.out
[2025-07-26 11:55:00] -rw------- 1 boinc boinc    980017 Jul 26 10:13 agis_schedconf.cvmfs.json
[2025-07-26 11:55:00] -rw------- 1 boinc boinc   1593052 Jul 26 10:13 agis_ddmendpoints.agis.ALL.json
[2025-07-26 11:55:00] drwx------ 4 boinc boinc      4096 Jul 26 10:13 pilot3
[2025-07-26 11:55:00] -rw------- 1 boinc boinc        95 Jul 26 11:53 pilot_heartbeat.json
[2025-07-26 11:55:00] -rw------- 1 boinc boinc 207995417 Jul 26 11:54 HITS.45743349._022012.pool.root.1
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc       529 Jul 26 11:54 boinc_task_state.xml
[2025-07-26 11:55:00] -rw------- 1 boinc boinc      1020 Jul 26 11:54 memory_monitor_summary.json
[2025-07-26 11:55:00] -rw------- 1 boinc boinc    226331 Jul 26 11:54 log.45743349._022012.job.log.tgz.1
[2025-07-26 11:55:00] -rw------- 1 boinc boinc      7753 Jul 26 11:54 heartbeat.json
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc      8192 Jul 26 11:54 boinc_mmap_file
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc        27 Jul 26 11:54 wrapper_checkpoint.txt
[2025-07-26 11:55:00] -rw------- 1 boinc boinc      4556 Jul 26 11:55 pilotlog.txt
[2025-07-26 11:55:00] -rw------- 1 boinc boinc    581323 Jul 26 11:55 log.45743349._022012.job.log.1
[2025-07-26 11:55:00] -rw------- 1 boinc boinc       357 Jul 26 11:55 output.list
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc       620 Jul 26 11:55 runtime_log
[2025-07-26 11:55:00] -rw------- 1 boinc boinc    829440 Jul 26 11:55 result.tar.gz
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc      8734 Jul 26 11:55 runtime_log.err
[2025-07-26 11:55:00] -rw------- 1 boinc boinc       659 Jul 26 11:55 NNYMDmXsXz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmY2yKDmBQNxPn.diag
[2025-07-26 11:55:00] -rw-r--r-- 1 boinc boinc     21365 Jul 26 11:55 stderr.txt
[2025-07-26 11:55:00] HITS file was successfully produced:
[2025-07-26 11:55:00] -rw------- 1 boinc boinc 207995417 Jul 26 11:54 shared/HITS.pool.root.1
[2025-07-26 11:55:00]  *** Contents of shared directory: ***
[2025-07-26 11:55:00] total 430392
[2025-07-26 11:55:00] -rw-r--r-- 2 boinc boinc 231318604 Jul 26 10:13 ATLAS.root_0
[2025-07-26 11:55:00] -rw-r--r-- 2 boinc boinc    542884 Jul 26 10:13 input.tar.gz
[2025-07-26 11:55:00] -rw-r--r-- 2 boinc boinc     15095 Jul 26 10:13 start_atlas.sh
[2025-07-26 11:55:00] -rw------- 1 boinc boinc 207995417 Jul 26 11:54 HITS.pool.root.1
[2025-07-26 11:55:00] -rw------- 1 boinc boinc    829440 Jul 26 11:55 result.tar.gz
11:55:01 (2221282): run_atlas exited; CPU time 17537.379469
11:55:01 (2221282): called boinc_finish(0)

</stderr_txt>
]]>

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