Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:46:45 (138470): wrapper (7.7.26015): starting
12:46:45 (138470): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 12:46:45] Arguments: --nthreads 12
[2025-07-25 12:46:45] Threads: 12
[2025-07-25 12:46:45] Checking for CVMFS
[2025-07-25 12:46:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 12:46:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 12:46:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 12:46:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 12:46:46] 2.11.5.0 6905 34699 214624 148751 1 404 32717261 45568001 16403 130560 0 294089252 99.764 209940390 28165 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-25 12:46:46] CVMFS is ok
[2025-07-25 12:46:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 12:46:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 12:46:46] Further information can be found at the LHC@home message board.
[2025-07-25 12:46:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 12:46:46] Checking for apptainer binary...
[2025-07-25 12:46:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 12:46:46] Running /usr/bin/apptainer --version
[2025-07-25 12:46:46] apptainer version 1.4.1-1.el9
[2025-07-25 12:46:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 12:46:47] wns0079.triumf.lcg
[2025-07-25 12:46:47] apptainer works
[2025-07-25 12:46:47] Set ATHENA_PROC_NUMBER=12
[2025-07-25 12:46:47] Set ATHENA_CORE_NUMBER=12
[2025-07-25 12:46:48] Starting ATLAS job with PandaID=6745058559
[2025-07-25 12:46:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 12:51:10]  *** The last 200 lines of the pilot log: ***
[2025-07-25 12:51:10] 2025-07-25 19:50:36,045 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:51:10] 2025-07-25 19:50:36,045 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:51:10] 2025-07-25 19:50:36,045 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:51:10] 2025-07-25 19:50:36,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | WARNING  | wrong length of table data, x=[1753472874.0], y=[3023.0] (must be same and length>=4)
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | could have reported an average CPU frequency of 2521 MHz (4 samples)
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | ..............................
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . Timing measurements:
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . get job = 0 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . initial setup = 3 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . payload setup = 13 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . stage-in = 0 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . payload execution = 36 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . stage-out = 0 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . log creation = 0 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | ..............................
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 12:51:10] 2025-07-25 19:50:36,047 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745058559/pilotlog.txt
[2025-07-25 12:51:10] 2025-07-25 19:50:36,203 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 12:51:10] - Log from pilotlog.txt -
[2025-07-25 12:51:10] 2025-07-25 19:50:36,026 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745058559/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 12:51:10] 2025-07-25 19:50:36,044 | INFO     | extracted standard info from prmon json
[2025-07-25 12:51:10] 2025-07-25 19:50:36,045 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:51:10] 2025-07-25 19:50:36,045 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:51:10] 2025-07-25 19:50:36,045 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:51:10] 2025-07-25 19:50:36,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | WARNING  | wrong length of table data, x=[1753472874.0], y=[3023.0] (must be same and length>=4)
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | could have reported an average CPU frequency of 2521 MHz (4 samples)
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | ..............................
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . Timing measurements:
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . get job = 0 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . initial setup = 3 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . payload setup = 13 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . stage-in = 0 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . payload execution = 36 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . stage-out = 0 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . log creation = 0 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | ..............................
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 12:51:10] 2025-07-25 19:50:36,047 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745058559/pilotlog.txt
[2025-07-25 12:51:10] 2025-07-25 19:50:36,204 | WARNING  | 
[2025-07-25 12:51:10] [begin log extracts]
[2025-07-25 12:51:10] - Log from pilotlog.txt -
[2025-07-25 12:51:10] 2025-07-25 19:50:36,026 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745058559/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 12:51:10] 2025-07-25 19:50:36,044 | INFO     | extracted standard info from prmon json
[2025-07-25 12:51:10] 2025-07-25 19:50:36,045 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:51:10] 2025-07-25 19:50:36,045 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:51:10] 2025-07-25 19:50:36,045 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:51:10] 2025-07-25 19:50:36,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | WARNING  | wrong length of table data, x=[1753472874.0], y=[3023.0] (must be same and length>=4)
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | could have reported an average CPU frequency of 2521 MHz (4 samples)
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | ..............................
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . Timing measurements:
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . get job = 0 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . initial setup = 3 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . payload setup = 13 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . stage-in = 0 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . payload execution = 36 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . stage-out = 0 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | . log creation = 0 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | ..............................
[2025-07-25 12:51:10] 2025-07-25 19:50:36,046 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 12:51:10] 2025-07-25 19:50:36,047 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745058559/pilotlog.txt
[2025-07-25 12:51:10] [end log extracts]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,204 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 12:51:10] 2025-07-25 19:50:36,204 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 12:51:10] 2025-07-25 19:50:36,568 | INFO     | 
[2025-07-25 12:51:10] 2025-07-25 19:50:36,568 | INFO     | job summary report
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | --------------------------------------------------
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | PanDA job id: 6745058559
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | task id: 45743349
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 12:48:12,016 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | pilot state: failed 
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | transexitcode: 65
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | exeerrorcode: 65
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | exitcode: 65
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | cpuconsumptiontime: 16 s
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | nevents: 0
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | neventsw: 0
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | pid: 148681
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | pgrp: 148681
[2025-07-25 12:51:10] 2025-07-25 19:50:36,569 | INFO     | corecount: 12
[2025-07-25 12:51:10] 2025-07-25 19:50:36,570 | INFO     | event service: False
[2025-07-25 12:51:10] 2025-07-25 19:50:36,570 | INFO     | sizes: {0: 2397419, 1: 2397419, 9: 2397709, 12: 2397737, 53: 2420994, 54: 2425418, 187: 2425556}
[2025-07-25 12:51:10] 2025-07-25 19:50:36,570 | INFO     | --------------------------------------------------
[2025-07-25 12:51:10] 2025-07-25 19:50:36,570 | INFO     | 
[2025-07-25 12:51:10] 2025-07-25 19:50:36,570 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 12:51:10] 2025-07-25 19:50:36,673 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,674 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,675 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 12:51:10] 2025-07-25 19:50:36,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,675 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 12:51:10] 2025-07-25 19:50:36,675 | INFO     | job 6745058559 has completed (purged errors)
[2025-07-25 12:51:10] 2025-07-25 19:50:36,675 | INFO     | overall cleanup function is called
[2025-07-25 12:51:10] 2025-07-25 19:50:37,682 | INFO     | --- collectZombieJob: --- 10, [148681]
[2025-07-25 12:51:10] 2025-07-25 19:50:37,682 | INFO     | zombie collector waiting for pid 148681
[2025-07-25 12:51:10] 2025-07-25 19:50:37,682 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 12:51:10] 2025-07-25 19:50:37,682 | INFO     | collected zombie processes
[2025-07-25 12:51:10] 2025-07-25 19:50:37,682 | INFO     | will attempt to kill all subprocesses of pid=148681
[2025-07-25 12:51:10] 2025-07-25 19:50:38,854 | INFO     | process IDs to be killed: [148681] (in reverse order)
[2025-07-25 12:51:10] 2025-07-25 19:50:38,933 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 12:51:10] 2025-07-25 19:50:38,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 12:51:10] 2025-07-25 19:50:38,942 | INFO     | did not find any defunct processes belonging to 148681
[2025-07-25 12:51:10] 2025-07-25 19:50:38,950 | INFO     | did not find any defunct processes belonging to 148681
[2025-07-25 12:51:10] 2025-07-25 19:50:38,951 | INFO     | ready for new job
[2025-07-25 12:51:10] 2025-07-25 19:50:38,951 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 12:51:10] 2025-07-25 19:50:38,952 | INFO     | ***************************************
[2025-07-25 12:51:10] 2025-07-25 19:50:38,952 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 12:51:10] 2025-07-25 19:50:38,952 | INFO     | ***************************************
[2025-07-25 12:51:10] 2025-07-25 19:50:38,952 | INFO     | 
[2025-07-25 12:51:10] 2025-07-25 19:50:38,954 | INFO     | architecture information:
[2025-07-25 12:51:10] 2025-07-25 19:50:38,955 | INFO     | executing command: cat /etc/os-release
[2025-07-25 12:51:10] 2025-07-25 19:50:39,029 | INFO     | cat /etc/os-release:
[2025-07-25 12:51:10] NAME="CentOS Linux"
[2025-07-25 12:51:10] VERSION="7 (Core)"
[2025-07-25 12:51:10] ID="centos"
[2025-07-25 12:51:10] ID_LIKE="rhel fedora"
[2025-07-25 12:51:10] VERSION_ID="7"
[2025-07-25 12:51:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 12:51:10] ANSI_COLOR="0;31"
[2025-07-25 12:51:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 12:51:10] HOME_URL="https://www.centos.org/"
[2025-07-25 12:51:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 12:51:10] 
[2025-07-25 12:51:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 12:51:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 12:51:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 12:51:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 12:51:10] 
[2025-07-25 12:51:10] 2025-07-25 19:50:39,029 | INFO     | ***************************************
[2025-07-25 12:51:10] 2025-07-25 19:50:39,533 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 12:51:10] 2025-07-25 19:50:39,622 | INFO     | sufficient remaining disk space (1847660118016 B)
[2025-07-25 12:51:10] 2025-07-25 19:50:39,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 12:51:10] 2025-07-25 19:50:39,623 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 12:51:10] 2025-07-25 19:50:39,623 | INFO     | update_server=False
[2025-07-25 12:51:10] 2025-07-25 19:50:39,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 12:51:10] 2025-07-25 19:50:39,624 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:51:10] 2025-07-25 19:50:39,624 | INFO     | aborting loop
[2025-07-25 12:51:10] 2025-07-25 19:50:39,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 12:51:10] 2025-07-25 19:50:39,744 | INFO     | all job control threads have been joined
[2025-07-25 12:51:10] 2025-07-25 19:50:40,234 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 12:51:10] 2025-07-25 19:50:40,476 | INFO     | all data control threads have been joined
[2025-07-25 12:51:10] 2025-07-25 19:50:40,629 | INFO     | [job] retrieve thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:40,630 | INFO     | [job] job monitor thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:40,752 | INFO     | [job] control thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:40,762 | INFO     | [job] validate thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:40,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:41,001 | INFO     | all payload control threads have been joined
[2025-07-25 12:51:10] 2025-07-25 19:50:41,122 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:41,185 | INFO     | [data] copytool_in thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:41,421 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:41,430 | INFO     | [payload] validate_post thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:41,482 | INFO     | [data] control thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:41,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:51:10] 2025-07-25 19:50:41,631 | INFO     | [data] copytool_out thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:41,672 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:42,007 | INFO     | [payload] control thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:42,134 | INFO     | [payload] failed_post thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:42,615 | INFO     | [job] queue monitor thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:44,245 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 12:51:10] 2025-07-25 19:50:44,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139929232250688)>', '<ExcThread(monitor, started 139928390317824)>']
[2025-07-25 12:51:10] 2025-07-25 19:50:49,731 | INFO     | all workflow threads have been joined
[2025-07-25 12:51:10] 2025-07-25 19:50:49,731 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 12:51:10] 2025-07-25 19:50:49,731 | INFO     | traces error code: 0
[2025-07-25 12:51:10] 2025-07-25 19:50:49,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 12:51:10] 2025-07-25 19:51:09,828 | INFO     | PID=142350 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-25 12:51:10] 2025-07-25 19:51:09,829 | INFO     | .. there are 28 such processes running
[2025-07-25 12:51:10] 2025-07-25 19:51:09,831 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 12:51:10] 2025-07-25 19:51:09,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 12:51:10] 2025-07-25 19:51:09,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 12:51:10] 2025-07-25 19:51:09,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 12:51:10] 2025-07-25 19:51:09,831 | INFO     | [monitor] control thread has ended
[2025-07-25 12:51:10] 2025-07-25 19:51:10,223 [wrapper] ==== pilot stdout END ====
[2025-07-25 12:51:10] 2025-07-25 19:51:10,225 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 12:51:10] 2025-07-25 19:51:10,227 [wrapper] pilotpid: 142350
[2025-07-25 12:51:10] 2025-07-25 19:51:10,229 [wrapper] Pilot exit status: 0
[2025-07-25 12:51:10] 2025-07-25 19:51:10,240 [wrapper] pandaids: 6745058559
[2025-07-25 12:51:10] 2025-07-25 19:51:10,341 [wrapper] cleanup supervisor_pilot  142356 142351
[2025-07-25 12:51:10] 2025-07-25 19:51:10,360 [wrapper] Test setup, not cleaning
[2025-07-25 12:51:10] 2025-07-25 19:51:10,405 [wrapper] apfmon messages muted
[2025-07-25 12:51:10] 2025-07-25 19:51:10,429 [wrapper] ==== wrapper stdout END ====
[2025-07-25 12:51:10] 2025-07-25 19:51:10,460 [wrapper] ==== wrapper stderr END ====
[2025-07-25 12:51:10]  *** Error codes and diagnostics ***
[2025-07-25 12:51:10]     "exeErrorCode": 65,
[2025-07-25 12:51:10]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 12:51:10]     "pilotErrorCode": 1305,
[2025-07-25 12:51:10]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 12:51:10]  *** Listing of results directory ***
[2025-07-25 12:51:10] total 145028
[2025-07-25 12:51:10] -rw-r--r--. 1 boinc boinc    530466 Jul 25 09:23 pilot3.tar.gz
[2025-07-25 12:51:10] -rw-r--r--. 1 boinc boinc      5112 Jul 25 09:44 queuedata.json
[2025-07-25 12:51:10] -rwx------. 1 boinc boinc     36292 Jul 25 09:44 runpilot2-wrapper.sh
[2025-07-25 12:51:10] -rw-r--r--. 1 boinc boinc       100 Jul 25 12:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 12:51:10] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 12:46 run_atlas
[2025-07-25 12:51:10] -rw-r--r--. 1 boinc boinc       105 Jul 25 12:46 job.xml
[2025-07-25 12:51:10] -rw-r--r--. 1 boinc boinc      6595 Jul 25 12:46 init_data.xml
[2025-07-25 12:51:10] -rw-r--r--. 2 boinc boinc 144428048 Jul 25 12:46 EVNT.45743347._001360.pool.root.1
[2025-07-25 12:51:10] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:46 start_atlas.sh
[2025-07-25 12:51:10] drwxrwx--x. 2 boinc boinc      4096 Jul 25 12:46 shared
[2025-07-25 12:51:10] -rw-r--r--. 2 boinc boinc    542888 Jul 25 12:46 input.tar.gz
[2025-07-25 12:51:10] -rw-r--r--. 1 boinc boinc         0 Jul 25 12:46 boinc_lockfile
[2025-07-25 12:51:10] -rw-r--r--. 1 boinc boinc      2561 Jul 25 12:46 pandaJob.out
[2025-07-25 12:51:10] -rw-------. 1 boinc boinc    979993 Jul 25 12:47 agis_schedconf.cvmfs.json
[2025-07-25 12:51:10] -rw-------. 1 boinc boinc   1593052 Jul 25 12:47 agis_ddmendpoints.agis.ALL.json
[2025-07-25 12:51:10] drwx------. 4 boinc boinc      4096 Jul 25 12:47 pilot3
[2025-07-25 12:51:10] -rw-r--r--. 1 boinc boinc       522 Jul 25 12:48 boinc_task_state.xml
[2025-07-25 12:51:10] -rw-------. 1 boinc boinc       947 Jul 25 12:48 memory_monitor_summary.json
[2025-07-25 12:51:10] -rw-------. 1 boinc boinc     21367 Jul 25 12:48 log.45743349._024004.job.log.tgz.1
[2025-07-25 12:51:10] -rw-------. 1 boinc boinc      8403 Jul 25 12:50 heartbeat.json
[2025-07-25 12:51:10] -rw-r--r--. 1 boinc boinc      8192 Jul 25 12:51 boinc_mmap_file
[2025-07-25 12:51:10] -rw-r--r--. 1 boinc boinc        22 Jul 25 12:51 wrapper_checkpoint.txt
[2025-07-25 12:51:10] -rw-------. 1 boinc boinc        95 Jul 25 12:51 pilot_heartbeat.json
[2025-07-25 12:51:10] -rw-------. 1 boinc boinc       822 Jul 25 12:51 pilotlog.txt
[2025-07-25 12:51:10] -rw-------. 1 boinc boinc     78861 Jul 25 12:51 log.45743349._024004.job.log.1
[2025-07-25 12:51:10] -rw-------. 1 boinc boinc       188 Jul 25 12:51 output.list
[2025-07-25 12:51:10] -rw-r--r--. 1 boinc boinc       620 Jul 25 12:51 runtime_log
[2025-07-25 12:51:10] -rw-------. 1 boinc boinc    122880 Jul 25 12:51 result.tar.gz
[2025-07-25 12:51:10] -rw-r--r--. 1 boinc boinc      8485 Jul 25 12:51 runtime_log.err
[2025-07-25 12:51:10] -rw-------. 1 boinc boinc       644 Jul 25 12:51 Q6wNDmViaz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmazPLDmmTjetn.diag
[2025-07-25 12:51:10] -rw-r--r--. 1 boinc boinc     21778 Jul 25 12:51 stderr.txt
[2025-07-25 12:51:11] No HITS result produced
[2025-07-25 12:51:11]  *** Contents of shared directory: ***
[2025-07-25 12:51:11] total 141716
[2025-07-25 12:51:11] -rw-r--r--. 2 boinc boinc 144428048 Jul 25 12:46 ATLAS.root_0
[2025-07-25 12:51:11] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:46 start_atlas.sh
[2025-07-25 12:51:11] -rw-r--r--. 2 boinc boinc    542888 Jul 25 12:46 input.tar.gz
[2025-07-25 12:51:11] -rw-------. 1 boinc boinc    122880 Jul 25 12:51 result.tar.gz
12:51:12 (138470): run_atlas exited; CPU time 23.477370
12:51:12 (138470): called boinc_finish(0)

</stderr_txt>
]]>

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