Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
07:59:50 (2738169): wrapper (7.7.26015): starting
07:59:50 (2738169): wrapper: running run_atlas (--nthreads 6)
[2025-07-27 07:59:50] Arguments: --nthreads 6
[2025-07-27 07:59:50] Threads: 6
[2025-07-27 07:59:50] Checking for CVMFS
[2025-07-27 07:59:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 07:59:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 07:59:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 07:59:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 07:59:51] 2.12.7.0 1004224 6815 62404 148801 0 57 3571076 6144001 0 130560 0 4833009 99.989 250494 3554 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-07-27 07:59:51] CVMFS is ok
[2025-07-27 07:59:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 07:59:51] Checking for apptainer binary...
[2025-07-27 07:59:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 07:59:51] Running /usr/bin/apptainer --version
[2025-07-27 07:59:51] apptainer version 1.4.0
[2025-07-27 07:59:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 07:59:51] Beta
[2025-07-27 07:59:51] apptainer works
[2025-07-27 07:59:51] Set ATHENA_PROC_NUMBER=6
[2025-07-27 07:59:51] Set ATHENA_CORE_NUMBER=6
[2025-07-27 07:59:51] Starting ATLAS job with PandaID=6744979116
[2025-07-27 07:59:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 09:25:09]  *** The last 200 lines of the pilot log: ***
[2025-07-27 09:25:09] ]
[2025-07-27 09:25:09] 2025-07-27 07:24:29,285 | INFO     | transferring file log.45743349._019223.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6744979116/log.45743349._019223.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 09:25:09] 2025-07-27 07:24:29,285 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6744979116/log.45743349._019223.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._019223.job
[2025-07-27 09:25:09] 2025-07-27 07:24:29,293 | INFO     | adding to output.list: log.45743349._019223.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/64/log.45743349._019223.job.log.tg
[2025-07-27 09:25:09] 2025-07-27 07:24:29,294 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 09:25:09] 2025-07-27 07:24:29,294 | INFO     | summary of transferred files:
[2025-07-27 09:25:09] 2025-07-27 07:24:29,294 | INFO     |  -- lfn=log.45743349._019223.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 09:25:09] 2025-07-27 07:24:29,294 | INFO     | stage-out finished correctly
[2025-07-27 09:25:09] 2025-07-27 07:24:30,453 | WARNING  | process 2748261 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 09:25:09] 2025-07-27 07:24:30,454 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6744979116/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 09:25:09] 2025-07-27 07:24:30,454 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6744979116/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 09:25:09] 2025-07-27 07:24:30,455 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2888610 B
[2025-07-27 09:25:09] 2025-07-27 07:24:30,455 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15777 B
[2025-07-27 09:25:09] 2025-07-27 07:24:30,455 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 09:25:09] 2025-07-27 07:24:30,461 | INFO     | sufficient remaining disk space (267576672256 B)
[2025-07-27 09:25:09] 2025-07-27 07:24:30,462 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 09:25:09] 2025-07-27 07:24:30,462 | INFO     | size of work directory /var/lib/boinc/slots/0/PanDA_Pilot-6744979116: 3188562 B (within 2537553920 B limit)
[2025-07-27 09:25:09] 2025-07-27 07:24:30,462 | INFO     | pfn file=/var/lib/boinc/slots/0/PanDA_Pilot-6744979116/HITS.45743349._019223.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 09:25:09] 2025-07-27 07:24:30,462 | INFO     | total size of present files: 0 B (workdir size: 3188562 B)
[2025-07-27 09:25:09] 2025-07-27 07:24:30,462 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6744979116/HITS.45743349._019223.pool.root.1 since it does not exist
[2025-07-27 09:25:09] 2025-07-27 07:24:30,508 | INFO     | number of running child processes to parent process 2748261: 1
[2025-07-27 09:25:09] 2025-07-27 07:24:30,508 | INFO     | maximum number of monitored processes: 6
[2025-07-27 09:25:09] 2025-07-27 07:24:32,182 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 09:25:09] 2025-07-27 07:24:32,225 | INFO     | job 6744979116 has state=finished
[2025-07-27 09:25:09] 2025-07-27 07:24:32,225 | INFO     | preparing for final server update for job 6744979116 in state='finished'
[2025-07-27 09:25:09] 2025-07-27 07:24:32,753 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 09:25:09] 2025-07-27 07:24:32,754 | INFO     | this job has now completed (state=finished)
[2025-07-27 09:25:09] 2025-07-27 07:24:32,754 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 09:25:09] 2025-07-27 07:24:32,754 | INFO     | log transfer has been attempted: DONE
[2025-07-27 09:25:09] 2025-07-27 07:24:32,754 | INFO     | job 6744979116 has finished - writing final server update
[2025-07-27 09:25:09] 2025-07-27 07:24:32,755 | INFO     | total number of processed events: 400 (read)
[2025-07-27 09:25:09] 2025-07-27 07:24:32,756 | INFO     | executing command: lscpu
[2025-07-27 09:25:09] 2025-07-27 07:24:32,771 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 09:25:09] 2025-07-27 07:24:33,011 | INFO     | monitor loop #389: job 0:6744979116 is in state 'finished'
[2025-07-27 09:25:09] 2025-07-27 07:24:33,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 09:25:09] 2025-07-27 07:24:35,514 | INFO     | monitor loop #390: job 0:6744979116 is in state 'finished'
[2025-07-27 09:25:09] 2025-07-27 07:24:35,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 09:25:09] 2025-07-27 07:24:36,756 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 09:25:09] 2025-07-27 07:24:36,757 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3700.0840000000003
[2025-07-27 09:25:09] 2025-07-27 07:24:36,758 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6744979116/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 09:25:09] 2025-07-27 07:24:36,758 | INFO     | extracted standard info from prmon json
[2025-07-27 09:25:09] 2025-07-27 07:24:36,758 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 09:25:09] 2025-07-27 07:24:36,758 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 09:25:09] 2025-07-27 07:24:36,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 09:25:09] 2025-07-27 07:24:36,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 09:25:09] 2025-07-27 07:24:36,759 | INFO     | fitting pss+swap vs Time
[2025-07-27 09:25:09] 2025-07-27 07:24:36,759 | INFO     | sum of square deviations: 136095575.0
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | sum of deviations: 2886794012.0
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | mean x: 1753598606.5
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | mean y: 2520816.9210526315
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | -- intersect: -37193971109.40164
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | intersect: -37193971109.40164
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | chi2: 0.01046741657783765
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | -- intersect: -37193971109.40164
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | current memory leak: 21.21 B/s (using 76 data points, chi2=0.01)
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | could have reported an average CPU frequency of 3700 MHz (6 samples)
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | ..............................
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | . Timing measurements:
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | . get job = 0 s
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | . initial setup = 1 s
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | . payload setup = 3 s
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | . stage-in = 0 s
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | . payload execution = 5053 s
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | . stage-out = 0 s
[2025-07-27 09:25:09] 2025-07-27 07:24:36,760 | INFO     | . log creation = 0 s
[2025-07-27 09:25:09] 2025-07-27 07:24:36,761 | INFO     | ..............................
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | 
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | job summary report
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | --------------------------------------------------
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | PanDA job id: 6744979116
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | task id: 45743349
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | errors: (none)
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | pilot state: finished 
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | transexitcode: 0
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | exeerrorcode: 0
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | exeerrordiag: 
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | exitcode: 0
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | exitmsg: OK
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | cpuconsumptiontime: 29220 s
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | nevents: 400
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | neventsw: 0
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | pid: 2748261
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | pgrp: 2748261
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | corecount: 6
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | event service: False
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | sizes: {0: 2396645, 1: 2397501, 3: 2397763, 11: 2397791, 5060: 2424170, 5061: 2433168, 5064: 2433380, 5068: 2433574}
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | --------------------------------------------------
[2025-07-27 09:25:09] 2025-07-27 07:24:36,798 | INFO     | 
[2025-07-27 09:25:09] 2025-07-27 07:24:36,799 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 09:25:09] 2025-07-27 07:24:36,808 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,809 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 09:25:09] 2025-07-27 07:24:36,810 | INFO     | job 6744979116 has completed (purged errors)
[2025-07-27 09:25:09] 2025-07-27 07:24:36,810 | INFO     | overall cleanup function is called
[2025-07-27 09:25:09] 2025-07-27 07:24:37,814 | INFO     | --- collectZombieJob: --- 10, [2748261]
[2025-07-27 09:25:09] 2025-07-27 07:24:37,815 | INFO     | zombie collector waiting for pid 2748261
[2025-07-27 09:25:09] 2025-07-27 07:24:37,815 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 09:25:09] 2025-07-27 07:24:37,815 | INFO     | collected zombie processes
[2025-07-27 09:25:09] 2025-07-27 07:24:37,816 | INFO     | will attempt to kill all subprocesses of pid=2748261
[2025-07-27 09:25:09] 2025-07-27 07:24:37,879 | INFO     | process IDs to be killed: [2748261] (in reverse order)
[2025-07-27 09:25:09] 2025-07-27 07:24:37,900 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 09:25:09] 2025-07-27 07:24:37,900 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 09:25:09] 2025-07-27 07:24:37,902 | INFO     | did not find any defunct processes belonging to 2748261
[2025-07-27 09:25:09] 2025-07-27 07:24:37,903 | INFO     | did not find any defunct processes belonging to 2748261
[2025-07-27 09:25:09] 2025-07-27 07:24:37,903 | INFO     | ready for new job
[2025-07-27 09:25:09] 2025-07-27 07:24:37,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 09:25:09] 2025-07-27 07:24:37,904 | INFO     | ***************************************
[2025-07-27 09:25:09] 2025-07-27 07:24:37,904 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 09:25:09] 2025-07-27 07:24:37,904 | INFO     | ***************************************
[2025-07-27 09:25:09] 2025-07-27 07:24:37,904 | INFO     | 
[2025-07-27 09:25:09] 2025-07-27 07:24:37,904 | INFO     | architecture information:
[2025-07-27 09:25:09] 2025-07-27 07:24:37,904 | INFO     | executing command: cat /etc/os-release
[2025-07-27 09:25:09] 2025-07-27 07:24:37,911 | INFO     | cat /etc/os-release:
[2025-07-27 09:25:09] NAME="CentOS Linux"
[2025-07-27 09:25:09] VERSION="7 (Core)"
[2025-07-27 09:25:09] ID="centos"
[2025-07-27 09:25:09] ID_LIKE="rhel fedora"
[2025-07-27 09:25:09] VERSION_ID="7"
[2025-07-27 09:25:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 09:25:09] ANSI_COLOR="0;31"
[2025-07-27 09:25:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 09:25:09] HOME_URL="https://www.centos.org/"
[2025-07-27 09:25:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 09:25:09] 
[2025-07-27 09:25:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 09:25:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 09:25:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 09:25:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 09:25:09] 
[2025-07-27 09:25:09] 2025-07-27 07:24:37,911 | INFO     | ***************************************
[2025-07-27 09:25:09] 2025-07-27 07:24:38,414 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 09:25:09] 2025-07-27 07:24:38,427 | INFO     | sufficient remaining disk space (267576672256 B)
[2025-07-27 09:25:09] 2025-07-27 07:24:38,427 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 09:25:09] 2025-07-27 07:24:38,427 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 09:25:09] 2025-07-27 07:24:38,427 | INFO     | update_server=False
[2025-07-27 09:25:09] 2025-07-27 07:24:38,428 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 09:25:09] 2025-07-27 07:24:38,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:25:09] 2025-07-27 07:24:38,428 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 09:25:09] 2025-07-27 07:24:38,484 | INFO     | all job control threads have been joined
[2025-07-27 09:25:09] 2025-07-27 07:24:38,835 | INFO     | all data control threads have been joined
[2025-07-27 09:25:09] 2025-07-27 07:24:39,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:25:09] 2025-07-27 07:24:39,024 | INFO     | aborting loop
[2025-07-27 09:25:09] 2025-07-27 07:24:39,433 | INFO     | [job] retrieve thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:39,434 | INFO     | [job] queue monitor thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:39,490 | INFO     | [job] control thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:39,537 | INFO     | all payload control threads have been joined
[2025-07-27 09:25:09] 2025-07-27 07:24:39,841 | INFO     | [data] control thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:39,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 09:25:09] 2025-07-27 07:24:40,020 | INFO     | [payload] failed_post thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:40,027 | INFO     | [job] job monitor thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:40,052 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:40,283 | INFO     | [job] validate thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:40,346 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:40,406 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:40,543 | INFO     | [payload] control thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:40,800 | INFO     | [payload] validate_post thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:40,857 | INFO     | [data] copytool_in thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:41,854 | INFO     | [data] copytool_out thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:42,435 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:49,287 | INFO     | job.realtimelogging is not enabled
[2025-07-27 09:25:09] 2025-07-27 07:24:50,292 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 09:25:09] 2025-07-27 07:24:52,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624390158144)>', '<ExcThread(monitor, started 140623596218112)>']
[2025-07-27 09:25:09] 2025-07-27 07:24:57,177 | INFO     | all workflow threads have been joined
[2025-07-27 09:25:09] 2025-07-27 07:24:57,177 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 09:25:09] 2025-07-27 07:24:57,178 | INFO     | traces error code: 0
[2025-07-27 09:25:09] 2025-07-27 07:24:57,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 09:25:09] 2025-07-27 07:25:08,911 | INFO     | PID=2741799 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 09:25:09] 2025-07-27 07:25:08,911 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 09:25:09] 2025-07-27 07:25:08,911 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 09:25:09] 2025-07-27 07:25:08,911 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 09:25:09] 2025-07-27 07:25:08,911 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 09:25:09] 2025-07-27 07:25:08,911 | INFO     | [monitor] control thread has ended
[2025-07-27 09:25:09] 2025-07-27 07:25:08,972 [wrapper] ==== pilot stdout END ====
[2025-07-27 09:25:09] 2025-07-27 07:25:08,974 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 09:25:09] 2025-07-27 07:25:08,976 [wrapper] pilotpid: 2741799
[2025-07-27 09:25:09] 2025-07-27 07:25:08,977 [wrapper] Pilot exit status: 0
[2025-07-27 09:25:09] 2025-07-27 07:25:08,983 [wrapper] pandaids: 6744979116
[2025-07-27 09:25:09] 2025-07-27 07:25:08,998 [wrapper] cleanup supervisor_pilot 2760066 2741800
[2025-07-27 09:25:09] 2025-07-27 07:25:08,999 [wrapper] Test setup, not cleaning
[2025-07-27 09:25:09] 2025-07-27 07:25:09,001 [wrapper] apfmon messages muted
[2025-07-27 09:25:09] 2025-07-27 07:25:09,003 [wrapper] ==== wrapper stdout END ====
[2025-07-27 09:25:09] 2025-07-27 07:25:09,004 [wrapper] ==== wrapper stderr END ====
[2025-07-27 09:25:09]  *** Error codes and diagnostics ***
[2025-07-27 09:25:09]     "exeErrorCode": 0,
[2025-07-27 09:25:09]     "exeErrorDiag": "",
[2025-07-27 09:25:09]     "pilotErrorCode": 0,
[2025-07-27 09:25:09]     "pilotErrorDiag": "",
[2025-07-27 09:25:09]  *** Listing of results directory ***
[2025-07-27 09:25:09] insgesamt 348336
[2025-07-27 09:25:09] -rw-r--r-- 1 boinc boinc    530466 25. Jul 11:31 pilot3.tar.gz
[2025-07-27 09:25:09] -rw-r--r-- 1 boinc boinc      5112 25. Jul 11:31 queuedata.json
[2025-07-27 09:25:09] -rwx------ 1 boinc boinc     36292 25. Jul 11:32 runpilot2-wrapper.sh
[2025-07-27 09:25:09] -rw-r--r-- 1 boinc boinc       100 27. Jul 07:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 09:25:09] -rwxr-xr-x 1 boinc boinc      7986 27. Jul 07:59 run_atlas
[2025-07-27 09:25:09] -rw-r--r-- 1 boinc boinc       105 27. Jul 07:59 job.xml
[2025-07-27 09:25:09] -rw-r--r-- 1 boinc boinc      6722 27. Jul 07:59 init_data.xml
[2025-07-27 09:25:09] -rw-r--r-- 2 boinc boinc 144290989 27. Jul 07:59 EVNT.45743347._000999.pool.root.1
[2025-07-27 09:25:09] drwxrwx--x 2 boinc boinc      4096 27. Jul 07:59 shared
[2025-07-27 09:25:09] -rw-r--r-- 2 boinc boinc    542887 27. Jul 07:59 input.tar.gz
[2025-07-27 09:25:09] -rw-r--r-- 2 boinc boinc     15095 27. Jul 07:59 start_atlas.sh
[2025-07-27 09:25:09] -rw-r--r-- 1 boinc boinc         0 27. Jul 07:59 boinc_lockfile
[2025-07-27 09:25:09] -rw-r--r-- 1 boinc boinc      2562 27. Jul 07:59 pandaJob.out
[2025-07-27 09:25:09] -rw------- 1 boinc boinc    980109 27. Jul 07:59 agis_schedconf.cvmfs.json
[2025-07-27 09:25:09] -rw------- 1 boinc boinc   1593052 27. Jul 07:59 agis_ddmendpoints.agis.ALL.json
[2025-07-27 09:25:09] drwx------ 4 boinc boinc      4096 27. Jul 07:59 pilot3
[2025-07-27 09:25:09] -rw------- 1 boinc boinc 206987361 27. Jul 09:24 HITS.45743349._019223.pool.root.1
[2025-07-27 09:25:09] -rw-r--r-- 1 boinc boinc       529 27. Jul 09:24 boinc_task_state.xml
[2025-07-27 09:25:09] -rw------- 1 boinc boinc      1019 27. Jul 09:24 memory_monitor_summary.json
[2025-07-27 09:25:09] -rw------- 1 boinc boinc        95 27. Jul 09:24 pilot_heartbeat.json
[2025-07-27 09:25:09] -rw------- 1 boinc boinc    276798 27. Jul 09:24 log.45743349._019223.job.log.tgz.1
[2025-07-27 09:25:09] -rw------- 1 boinc boinc      7748 27. Jul 09:24 heartbeat.json
[2025-07-27 09:25:09] -rw-r--r-- 1 boinc boinc        27 27. Jul 09:24 wrapper_checkpoint.txt
[2025-07-27 09:25:09] -rw-r--r-- 1 boinc boinc      8192 27. Jul 09:24 boinc_mmap_file
[2025-07-27 09:25:09] -rw------- 1 boinc boinc       747 27. Jul 09:25 pilotlog.txt
[2025-07-27 09:25:09] -rw------- 1 boinc boinc    490015 27. Jul 09:25 log.45743349._019223.job.log.1
[2025-07-27 09:25:09] -rw------- 1 boinc boinc       357 27. Jul 09:25 output.list
[2025-07-27 09:25:09] -rw-r--r-- 1 boinc boinc       620 27. Jul 09:25 runtime_log
[2025-07-27 09:25:09] -rw------- 1 boinc boinc    788480 27. Jul 09:25 result.tar.gz
[2025-07-27 09:25:09] -rw------- 1 boinc boinc       639 27. Jul 09:25 xtVMDmAyTz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiDPLDm4crsum.diag
[2025-07-27 09:25:09] -rw-r--r-- 1 boinc boinc      8602 27. Jul 09:25 runtime_log.err
[2025-07-27 09:25:09] -rw-r--r-- 1 boinc boinc     22355 27. Jul 09:25 stderr.txt
[2025-07-27 09:25:09] HITS file was successfully produced:
[2025-07-27 09:25:09] -rw------- 1 boinc boinc 206987361 27. Jul 09:24 shared/HITS.pool.root.1
[2025-07-27 09:25:09]  *** Contents of shared directory: ***
[2025-07-27 09:25:09] insgesamt 344380
[2025-07-27 09:25:09] -rw-r--r-- 2 boinc boinc 144290989 27. Jul 07:59 ATLAS.root_0
[2025-07-27 09:25:09] -rw-r--r-- 2 boinc boinc    542887 27. Jul 07:59 input.tar.gz
[2025-07-27 09:25:09] -rw-r--r-- 2 boinc boinc     15095 27. Jul 07:59 start_atlas.sh
[2025-07-27 09:25:09] -rw------- 1 boinc boinc 206987361 27. Jul 09:24 HITS.pool.root.1
[2025-07-27 09:25:09] -rw------- 1 boinc boinc    788480 27. Jul 09:25 result.tar.gz
09:25:10 (2738169): run_atlas exited; CPU time 29272.096322
09:25:10 (2738169): called boinc_finish(0)

</stderr_txt>
]]>

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