Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
21:44:44 (1402823): wrapper (7.7.26015): starting
21:44:44 (1402823): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 21:44:44] Arguments: --nthreads 4
[2025-07-26 21:44:44] Threads: 4
[2025-07-26 21:44:44] Checking for CVMFS
[2025-07-26 21:44:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 21:44:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 21:44:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 21:44:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 21:44:44] 2.12.7.0 1254317 6610 68824 148787 0 188 4295543 6144001 1834 130560 0 12491960 99.991 251466 2881 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-07-26 21:44:44] CVMFS is ok
[2025-07-26 21:44:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 21:44:44] Checking for apptainer binary...
[2025-07-26 21:44:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 21:44:44] Running /usr/bin/apptainer --version
[2025-07-26 21:44:44] apptainer version 1.4.0
[2025-07-26 21:44:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 21:44:44] Ryzen8
[2025-07-26 21:44:44] apptainer works
[2025-07-26 21:44:44] Set ATHENA_PROC_NUMBER=4
[2025-07-26 21:44:44] Set ATHENA_CORE_NUMBER=4
[2025-07-26 21:44:44] Starting ATLAS job with PandaID=6745055624
[2025-07-26 21:44:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:23:00]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:23:00]  status=None
[2025-07-26 23:23:00]  status_code=0
[2025-07-26 23:23:00]  storage_token=
[2025-07-26 23:23:00]  surl=/var/lib/boinc2/slots/0/PanDA_Pilot-6745055624/log.45743349._021814.job.log.tgz.1
[2025-07-26 23:23:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/f5/log.45743349._021814.job.log.tgz.1
[2025-07-26 23:23:00]  workdir=None
[2025-07-26 23:23:00] ]
[2025-07-26 23:23:00] 2025-07-26 21:22:25,268 | INFO     | transferring file log.45743349._021814.job.log.tgz.1 from /var/lib/boinc2/slots/0/PanDA_Pilot-6745055624/log.45743349._021814.job.log.tgz.1 to /var/lib/boinc2/slot
[2025-07-26 23:23:00] 2025-07-26 21:22:25,268 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc2/slots/0/PanDA_Pilot-6745055624/log.45743349._021814.job.log.tgz.1 /var/lib/boinc2/slots/0/log.45743349._021814.j
[2025-07-26 23:23:00] 2025-07-26 21:22:25,278 | INFO     | adding to output.list: log.45743349._021814.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/f5/log.45743349._021814.job.log.tg
[2025-07-26 23:23:00] 2025-07-26 21:22:25,278 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 23:23:00] 2025-07-26 21:22:25,279 | INFO     | summary of transferred files:
[2025-07-26 23:23:00] 2025-07-26 21:22:25,279 | INFO     |  -- lfn=log.45743349._021814.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 23:23:00] 2025-07-26 21:22:25,279 | INFO     | stage-out finished correctly
[2025-07-26 23:23:00] 2025-07-26 21:22:25,325 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 23:23:00] 2025-07-26 21:22:25,368 | INFO     | job 6745055624 has state=finished
[2025-07-26 23:23:00] 2025-07-26 21:22:25,368 | INFO     | preparing for final server update for job 6745055624 in state='finished'
[2025-07-26 23:23:00] 2025-07-26 21:22:25,886 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-26 23:23:00] 2025-07-26 21:22:25,886 | INFO     | this job has now completed (state=finished)
[2025-07-26 23:23:00] 2025-07-26 21:22:25,886 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 23:23:00] 2025-07-26 21:22:25,886 | INFO     | log transfer has been attempted: DONE
[2025-07-26 23:23:00] 2025-07-26 21:22:25,886 | INFO     | job 6745055624 has finished - writing final server update
[2025-07-26 23:23:00] 2025-07-26 21:22:25,886 | INFO     | total number of processed events: 400 (read)
[2025-07-26 23:23:00] 2025-07-26 21:22:25,886 | INFO     | executing command: lscpu
[2025-07-26 23:23:00] 2025-07-26 21:22:25,898 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 23:23:00] 2025-07-26 21:22:27,535 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 23:23:00] 2025-07-26 21:22:27,536 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4334.245416666667
[2025-07-26 23:23:00] 2025-07-26 21:22:27,537 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6745055624/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:23:00] 2025-07-26 21:22:27,538 | INFO     | extracted standard info from prmon json
[2025-07-26 23:23:00] 2025-07-26 21:22:27,538 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:23:00] 2025-07-26 21:22:27,538 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:23:00] 2025-07-26 21:22:27,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:23:00] 2025-07-26 21:22:27,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:23:00] 2025-07-26 21:22:27,539 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:23:00] 2025-07-26 21:22:27,539 | INFO     | sum of square deviations: 218571540.0
[2025-07-26 23:23:00] 2025-07-26 21:22:27,539 | INFO     | sum of deviations: -12568482639.00001
[2025-07-26 23:23:00] 2025-07-26 21:22:27,539 | INFO     | mean x: 1753562096.0
[2025-07-26 23:23:00] 2025-07-26 21:22:27,539 | INFO     | mean y: 2441267.146067416
[2025-07-26 23:23:00] 2025-07-26 21:22:27,539 | INFO     | -- intersect: 100837228632.34682
[2025-07-26 23:23:00] 2025-07-26 21:22:27,539 | INFO     | intersect: 100837228632.34682
[2025-07-26 23:23:00] 2025-07-26 21:22:27,539 | INFO     | chi2: 0.1083907042860524
[2025-07-26 23:23:00] 2025-07-26 21:22:27,540 | INFO     | -- intersect: 100837228632.34682
[2025-07-26 23:23:00] 2025-07-26 21:22:27,540 | INFO     | current memory leak: -57.50 B/s (using 89 data points, chi2=0.11)
[2025-07-26 23:23:00] 2025-07-26 21:22:27,540 | INFO     | could have reported an average CPU frequency of 4333 MHz (7 samples)
[2025-07-26 23:23:00] 2025-07-26 21:22:27,540 | INFO     | ..............................
[2025-07-26 23:23:00] 2025-07-26 21:22:27,540 | INFO     | . Timing measurements:
[2025-07-26 23:23:00] 2025-07-26 21:22:27,540 | INFO     | . get job = 0 s
[2025-07-26 23:23:00] 2025-07-26 21:22:27,540 | INFO     | . initial setup = 0 s
[2025-07-26 23:23:00] 2025-07-26 21:22:27,540 | INFO     | . payload setup = 2 s
[2025-07-26 23:23:00] 2025-07-26 21:22:27,540 | INFO     | . stage-in = 0 s
[2025-07-26 23:23:00] 2025-07-26 21:22:27,540 | INFO     | . payload execution = 5836 s
[2025-07-26 23:23:00] 2025-07-26 21:22:27,540 | INFO     | . stage-out = 0 s
[2025-07-26 23:23:00] 2025-07-26 21:22:27,540 | INFO     | . log creation = 0 s
[2025-07-26 23:23:00] 2025-07-26 21:22:27,540 | INFO     | ..............................
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | 
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | job summary report
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | --------------------------------------------------
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | PanDA job id: 6745055624
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | task id: 45743349
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | errors: (none)
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | pilot state: finished 
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | transexitcode: 0
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | exeerrorcode: 0
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | exeerrordiag: 
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | exitcode: 0
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | exitmsg: OK
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | cpuconsumptiontime: 22552 s
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | nevents: 400
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | neventsw: 0
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | pid: 1412941
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | pgrp: 1412941
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | corecount: 4
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | event service: False
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | sizes: {0: 2397472, 2: 2397734, 11: 2397762, 5842: 2424600, 5843: 2433655, 5846: 2433793}
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | --------------------------------------------------
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | 
[2025-07-26 23:23:00] 2025-07-26 21:22:27,958 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,970 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,971 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:23:00] 2025-07-26 21:22:27,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,971 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:23:00] 2025-07-26 21:22:27,971 | INFO     | job 6745055624 has completed (purged errors)
[2025-07-26 23:23:00] 2025-07-26 21:22:27,971 | INFO     | overall cleanup function is called
[2025-07-26 23:23:00] 2025-07-26 21:22:28,913 | WARNING  | process 1412941 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 23:23:00] 2025-07-26 21:22:28,948 | INFO     | using path: /var/lib/boinc2/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:23:00] 2025-07-26 21:22:28,948 | INFO     | using path: /var/lib/boinc2/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:23:00] 2025-07-26 21:22:28,949 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc2/slots/0/PanDA_Pilot-6745055624/payload.stdout) since it has not been created yet
[2025-07-26 23:23:00] 2025-07-26 21:22:28,949 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-07-26 23:23:00] 2025-07-26 21:22:28,958 | INFO     | sufficient remaining disk space (178280988672 B)
[2025-07-26 23:23:00] 2025-07-26 21:22:28,958 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-07-26 23:23:00] 2025-07-26 21:22:28,959 | INFO     | output file size check: skipping output file /var/lib/boinc2/slots/0/PanDA_Pilot-6745055624/HITS.45743349._021814.pool.root.1 since it does not exist
[2025-07-26 23:23:00] 2025-07-26 21:22:28,975 | INFO     | --- collectZombieJob: --- 10, [1412941]
[2025-07-26 23:23:00] 2025-07-26 21:22:28,975 | INFO     | zombie collector waiting for pid 1412941
[2025-07-26 23:23:00] 2025-07-26 21:22:28,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:23:00] 2025-07-26 21:22:28,975 | INFO     | collected zombie processes
[2025-07-26 23:23:00] 2025-07-26 21:22:28,975 | INFO     | will attempt to kill all subprocesses of pid=1412941
[2025-07-26 23:23:00] 2025-07-26 21:22:29,043 | INFO     | number of running child processes to parent process 1412941: 1
[2025-07-26 23:23:00] 2025-07-26 21:22:29,043 | INFO     | maximum number of monitored processes: 6
[2025-07-26 23:23:00] 2025-07-26 21:22:29,044 | INFO     | aborting job monitoring since job object (job id=6745055624) has expired
[2025-07-26 23:23:00] 2025-07-26 21:22:29,059 | INFO     | process IDs to be killed: [1412941] (in reverse order)
[2025-07-26 23:23:00] 2025-07-26 21:22:29,084 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:23:00] 2025-07-26 21:22:29,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:23:00] 2025-07-26 21:22:29,086 | INFO     | did not find any defunct processes belonging to 1412941
[2025-07-26 23:23:00] 2025-07-26 21:22:29,088 | INFO     | did not find any defunct processes belonging to 1412941
[2025-07-26 23:23:00] 2025-07-26 21:22:29,088 | INFO     | ready for new job
[2025-07-26 23:23:00] 2025-07-26 21:22:29,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:23:00] 2025-07-26 21:22:29,089 | INFO     | ***************************************
[2025-07-26 23:23:00] 2025-07-26 21:22:29,089 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:23:00] 2025-07-26 21:22:29,089 | INFO     | ***************************************
[2025-07-26 23:23:00] 2025-07-26 21:22:29,089 | INFO     | 
[2025-07-26 23:23:00] 2025-07-26 21:22:29,089 | INFO     | architecture information:
[2025-07-26 23:23:00] 2025-07-26 21:22:29,089 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:23:00] 2025-07-26 21:22:29,097 | INFO     | cat /etc/os-release:
[2025-07-26 23:23:00] NAME="CentOS Linux"
[2025-07-26 23:23:00] VERSION="7 (Core)"
[2025-07-26 23:23:00] ID="centos"
[2025-07-26 23:23:00] ID_LIKE="rhel fedora"
[2025-07-26 23:23:00] VERSION_ID="7"
[2025-07-26 23:23:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:23:00] ANSI_COLOR="0;31"
[2025-07-26 23:23:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:23:00] HOME_URL="https://www.centos.org/"
[2025-07-26 23:23:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:23:00] 
[2025-07-26 23:23:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:23:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:23:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:23:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:23:00] 
[2025-07-26 23:23:00] 2025-07-26 21:22:29,098 | INFO     | ***************************************
[2025-07-26 23:23:00] 2025-07-26 21:22:29,600 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-07-26 23:23:00] 2025-07-26 21:22:29,609 | INFO     | sufficient remaining disk space (178282037248 B)
[2025-07-26 23:23:00] 2025-07-26 21:22:29,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:23:00] 2025-07-26 21:22:29,609 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:23:00] 2025-07-26 21:22:29,609 | INFO     | update_server=False
[2025-07-26 23:23:00] 2025-07-26 21:22:29,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:23:00] 2025-07-26 21:22:29,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:23:00] 2025-07-26 21:22:29,610 | INFO     | will abort loop
[2025-07-26 23:23:00] 2025-07-26 21:22:29,893 | INFO     | all data control threads have been joined
[2025-07-26 23:23:00] 2025-07-26 21:22:30,327 | INFO     | all payload control threads have been joined
[2025-07-26 23:23:00] 2025-07-26 21:22:30,417 | INFO     | all job control threads have been joined
[2025-07-26 23:23:00] 2025-07-26 21:22:30,612 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:30,615 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:30,645 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:30,716 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:30,832 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:23:00] 2025-07-26 21:22:30,898 | INFO     | [data] control thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:31,012 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:31,332 | INFO     | [payload] control thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:31,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:23:00] 2025-07-26 21:22:31,422 | INFO     | [job] control thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:31,456 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:31,663 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:32,012 | INFO     | [job] validate thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:32,185 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:32,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:23:00] 2025-07-26 21:22:32,836 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:33,600 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:35,373 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:40,358 | INFO     | job.realtimelogging is not enabled
[2025-07-26 23:23:00] 2025-07-26 21:22:41,363 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:23:00] 2025-07-26 21:22:42,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139630899754816)>', '<ExcThread(monitor, started 139630158526208)>']
[2025-07-26 23:23:00] 2025-07-26 21:22:47,592 | INFO     | all workflow threads have been joined
[2025-07-26 23:23:00] 2025-07-26 21:22:47,592 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:23:00] 2025-07-26 21:22:47,592 | INFO     | traces error code: 0
[2025-07-26 23:23:00] 2025-07-26 21:22:47,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:23:00] 2025-07-26 21:23:00,225 | INFO     | PID=1406457 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 23:23:00] 2025-07-26 21:23:00,226 | INFO     | .. there are 3 such processes running
[2025-07-26 23:23:00] 2025-07-26 21:23:00,226 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:23:00] 2025-07-26 21:23:00,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:23:00] 2025-07-26 21:23:00,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:23:00] 2025-07-26 21:23:00,226 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:23:00] 2025-07-26 21:23:00,226 | INFO     | [monitor] control thread has ended
[2025-07-26 23:23:00] 2025-07-26 21:23:00,286 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:23:00] 2025-07-26 21:23:00,287 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:23:00] 2025-07-26 21:23:00,288 [wrapper] pilotpid: 1406457
[2025-07-26 23:23:00] 2025-07-26 21:23:00,290 [wrapper] Pilot exit status: 0
[2025-07-26 23:23:00] 2025-07-26 21:23:00,294 [wrapper] pandaids: 6745055624
[2025-07-26 23:23:00] 2025-07-26 21:23:00,310 [wrapper] cleanup supervisor_pilot 1456497 1406458
[2025-07-26 23:23:00] 2025-07-26 21:23:00,312 [wrapper] Test setup, not cleaning
[2025-07-26 23:23:00] 2025-07-26 21:23:00,313 [wrapper] apfmon messages muted
[2025-07-26 23:23:00] 2025-07-26 21:23:00,314 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:23:00] 2025-07-26 21:23:00,315 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:23:00]  *** Error codes and diagnostics ***
[2025-07-26 23:23:00]     "exeErrorCode": 0,
[2025-07-26 23:23:00]     "exeErrorDiag": "",
[2025-07-26 23:23:00]     "pilotErrorCode": 0,
[2025-07-26 23:23:00]     "pilotErrorDiag": "",
[2025-07-26 23:23:00]  *** Listing of results directory ***
[2025-07-26 23:23:00] insgesamt 435156
[2025-07-26 23:23:00] -rw-r--r-- 1 boinc boinc    530466 25. Jul 15:22 pilot3.tar.gz
[2025-07-26 23:23:00] -rw-r--r-- 1 boinc boinc      5112 25. Jul 15:32 queuedata.json
[2025-07-26 23:23:00] -rwx------ 1 boinc boinc     36292 25. Jul 15:32 runpilot2-wrapper.sh
[2025-07-26 23:23:00] -rw-r--r-- 1 boinc boinc       100 26. Jul 21:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:23:00] -rwxr-xr-x 1 boinc boinc      7986 26. Jul 21:44 run_atlas
[2025-07-26 23:23:00] -rw-r--r-- 1 boinc boinc       105 26. Jul 21:44 job.xml
[2025-07-26 23:23:00] -rw-r--r-- 2 boinc boinc     15095 26. Jul 21:44 start_atlas.sh
[2025-07-26 23:23:00] drwxrwx--x 2 boinc boinc      4096 26. Jul 21:44 shared
[2025-07-26 23:23:00] -rw-r--r-- 2 boinc boinc    542897 26. Jul 21:44 input.tar.gz
[2025-07-26 23:23:00] -rw-r--r-- 1 boinc boinc      9586 26. Jul 21:44 init_data.xml
[2025-07-26 23:23:00] -rw-r--r-- 2 boinc boinc 228676529 26. Jul 21:44 EVNT.45743347._001247.pool.root.1
[2025-07-26 23:23:00] -rw-r--r-- 1 boinc boinc         0 26. Jul 21:44 boinc_lockfile
[2025-07-26 23:23:00] -rw-r--r-- 1 boinc boinc      2561 26. Jul 21:44 pandaJob.out
[2025-07-26 23:23:00] -rw------- 1 boinc boinc    980125 26. Jul 21:44 agis_schedconf.cvmfs.json
[2025-07-26 23:23:00] -rw------- 1 boinc boinc   1593052 26. Jul 21:44 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:23:00] drwx------ 4 boinc boinc      4096 26. Jul 21:44 pilot3
[2025-07-26 23:23:00] -rw------- 1 boinc boinc 211394693 26. Jul 23:22 HITS.45743349._021814.pool.root.1
[2025-07-26 23:23:00] -rw------- 1 boinc boinc      1023 26. Jul 23:22 memory_monitor_summary.json
[2025-07-26 23:23:00] -rw------- 1 boinc boinc    243242 26. Jul 23:22 log.45743349._021814.job.log.tgz.1
[2025-07-26 23:23:00] -rw------- 1 boinc boinc      7764 26. Jul 23:22 heartbeat.json
[2025-07-26 23:23:00] -rw-r--r-- 1 boinc boinc       529 26. Jul 23:22 boinc_task_state.xml
[2025-07-26 23:23:00] -rw-r--r-- 1 boinc boinc        27 26. Jul 23:23 wrapper_checkpoint.txt
[2025-07-26 23:23:00] -rw-r--r-- 1 boinc boinc      8192 26. Jul 23:23 boinc_mmap_file
[2025-07-26 23:23:00] -rw------- 1 boinc boinc       822 26. Jul 23:23 pilotlog.txt
[2025-07-26 23:23:00] -rw------- 1 boinc boinc        95 26. Jul 23:23 pilot_heartbeat.json
[2025-07-26 23:23:00] -rw------- 1 boinc boinc    581170 26. Jul 23:23 log.45743349._021814.job.log.1
[2025-07-26 23:23:00] -rw------- 1 boinc boinc       357 26. Jul 23:23 output.list
[2025-07-26 23:23:00] -rw-r--r-- 1 boinc boinc       620 26. Jul 23:23 runtime_log
[2025-07-26 23:23:00] -rw------- 1 boinc boinc    839680 26. Jul 23:23 result.tar.gz
[2025-07-26 23:23:00] -rw------- 1 boinc boinc       642 26. Jul 23:23 YbSMDmeiXz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRePLDmpoBfkn.diag
[2025-07-26 23:23:00] -rw-r--r-- 1 boinc boinc      8637 26. Jul 23:23 runtime_log.err
[2025-07-26 23:23:00] -rw-r--r-- 1 boinc boinc     21831 26. Jul 23:23 stderr.txt
[2025-07-26 23:23:00] HITS file was successfully produced:
[2025-07-26 23:23:00] -rw------- 1 boinc boinc 211394693 26. Jul 23:22 shared/HITS.pool.root.1
[2025-07-26 23:23:00]  *** Contents of shared directory: ***
[2025-07-26 23:23:00] insgesamt 431140
[2025-07-26 23:23:00] -rw-r--r-- 2 boinc boinc     15095 26. Jul 21:44 start_atlas.sh
[2025-07-26 23:23:00] -rw-r--r-- 2 boinc boinc    542897 26. Jul 21:44 input.tar.gz
[2025-07-26 23:23:00] -rw-r--r-- 2 boinc boinc 228676529 26. Jul 21:44 ATLAS.root_0
[2025-07-26 23:23:00] -rw------- 1 boinc boinc 211394693 26. Jul 23:22 HITS.pool.root.1
[2025-07-26 23:23:00] -rw------- 1 boinc boinc    839680 26. Jul 23:23 result.tar.gz
23:23:02 (1402823): run_atlas exited; CPU time 22589.837329
23:23:02 (1402823): called boinc_finish(0)

</stderr_txt>
]]>

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