Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:31:33 (181184): wrapper (7.7.26015): starting
04:31:33 (181184): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 04:31:33] Arguments: --nthreads 4
[2025-07-29 04:31:33] Threads: 4
[2025-07-29 04:31:33] Checking for CVMFS
[2025-07-29 04:31:33] No cvmfs_config command found, will try listing directly
[2025-07-29 04:31:33] CVMFS is ok
[2025-07-29 04:31:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 04:31:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 04:31:33] Further information can be found at the LHC@home message board.
[2025-07-29 04:31:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 04:31:33] Checking for apptainer binary...
[2025-07-29 04:31:33] which: no apptainer in ((null))
[2025-07-29 04:31:33] apptainer is not installed, using version from CVMFS
[2025-07-29 04:31:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 04:31:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-07-29 04:31:34] apptainer works
[2025-07-29 04:31:34] Set ATHENA_PROC_NUMBER=4
[2025-07-29 04:31:34] Set ATHENA_CORE_NUMBER=4
[2025-07-29 04:31:34] Starting ATLAS job with PandaID=6745058198
[2025-07-29 04:31:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 08:41:12]  *** The last 200 lines of the pilot log: ***
[2025-07-29 08:41:12] 2025-07-29 06:40:38,143 | INFO     | sum of deviations: -61091689527.00001
[2025-07-29 08:41:12] 2025-07-29 06:40:38,143 | INFO     | mean x: 1753763771.0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,144 | INFO     | mean y: 2383261.3591836733
[2025-07-29 08:41:12] 2025-07-29 06:40:38,144 | INFO     | -- intersect: 23497834403.091007
[2025-07-29 08:41:12] 2025-07-29 06:40:38,144 | INFO     | intersect: 23497834403.091007
[2025-07-29 08:41:12] 2025-07-29 06:40:38,144 | INFO     | chi2: 2.380443618062828
[2025-07-29 08:41:12] 2025-07-29 06:40:38,145 | INFO     | sum of square deviations: 4286517580.0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,147 | INFO     | sum of deviations: -45624718749.0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,147 | INFO     | mean x: 1753763618.5
[2025-07-29 08:41:12] 2025-07-29 06:40:38,147 | INFO     | mean y: 2391753.6333333333
[2025-07-29 08:41:12] 2025-07-29 06:40:38,147 | INFO     | -- intersect: 18669053059.217213
[2025-07-29 08:41:12] 2025-07-29 06:40:38,147 | INFO     | intersect: 18669053059.217213
[2025-07-29 08:41:12] 2025-07-29 06:40:38,147 | INFO     | chi2: 1.7181822798238717
[2025-07-29 08:41:12] 2025-07-29 06:40:38,148 | INFO     | current chi2=1.7181822798238717 (change=27.820920991940802 %)
[2025-07-29 08:41:12] 2025-07-29 06:40:38,148 | INFO     | sum of square deviations: 4024149870.0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,150 | INFO     | sum of deviations: -44585304003.0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,150 | INFO     | mean x: 1753763466.0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,150 | INFO     | mean y: 2392357.8723404254
[2025-07-29 08:41:12] 2025-07-29 06:40:38,150 | INFO     | -- intersect: 19433099415.749622
[2025-07-29 08:41:12] 2025-07-29 06:40:38,150 | INFO     | intersect: 19433099415.749622
[2025-07-29 08:41:12] 2025-07-29 06:40:38,151 | INFO     | chi2: 1.7134569651507678
[2025-07-29 08:41:12] 2025-07-29 06:40:38,151 | INFO     | current chi2=1.7134569651507678 (change=0.2750182404155787 %)
[2025-07-29 08:41:12] 2025-07-29 06:40:38,151 | INFO     | right removable region: 234
[2025-07-29 08:41:12] 2025-07-29 06:40:38,151 | INFO     | sum of square deviations: 4286517580.0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,153 | INFO     | sum of deviations: -88440391371.5
[2025-07-29 08:41:12] 2025-07-29 06:40:38,153 | INFO     | mean x: 1753763923.5
[2025-07-29 08:41:12] 2025-07-29 06:40:38,153 | INFO     | mean y: 2398301.845833333
[2025-07-29 08:41:12] 2025-07-29 06:40:38,153 | INFO     | -- intersect: 36186448611.41143
[2025-07-29 08:41:12] 2025-07-29 06:40:38,154 | INFO     | intersect: 36186448611.41143
[2025-07-29 08:41:12] 2025-07-29 06:40:38,154 | INFO     | chi2: 1.0924916968278202
[2025-07-29 08:41:12] 2025-07-29 06:40:38,154 | INFO     | current chi2=1.0924916968278202 (change=54.105541986460715 %)
[2025-07-29 08:41:12] 2025-07-29 06:40:38,155 | INFO     | sum of square deviations: 4024149870.0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,156 | INFO     | sum of deviations: -78455327571.0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,156 | INFO     | mean x: 1753764076.0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,157 | INFO     | mean y: 2392485.7361702127
[2025-07-29 08:41:12] 2025-07-29 06:40:38,157 | INFO     | -- intersect: 34193995559.612774
[2025-07-29 08:41:12] 2025-07-29 06:40:38,157 | INFO     | intersect: 34193995559.612774
[2025-07-29 08:41:12] 2025-07-29 06:40:38,157 | INFO     | chi2: 1.0741640340941756
[2025-07-29 08:41:12] 2025-07-29 06:40:38,157 | INFO     | current chi2=1.0741640340941756 (change=1.6776020162772096 %)
[2025-07-29 08:41:12] 2025-07-29 06:40:38,158 | INFO     | left removable region: 20
[2025-07-29 08:41:12] 2025-07-29 06:40:38,158 | INFO     | sum of square deviations: 3038856977.5
[2025-07-29 08:41:12] 2025-07-29 06:40:38,159 | INFO     | sum of deviations: -39373411085.5
[2025-07-29 08:41:12] 2025-07-29 06:40:38,160 | INFO     | mean x: 1753764045.5
[2025-07-29 08:41:12] 2025-07-29 06:40:38,160 | INFO     | mean y: 2387310.042056075
[2025-07-29 08:41:12] 2025-07-29 06:40:38,160 | INFO     | -- intersect: 22725297016.456837
[2025-07-29 08:41:12] 2025-07-29 06:40:38,160 | INFO     | intersect: 22725297016.456837
[2025-07-29 08:41:12] 2025-07-29 06:40:38,160 | INFO     | chi2: 0.30704888280233456
[2025-07-29 08:41:12] 2025-07-29 06:40:38,161 | INFO     | -- intersect: 22725297016.456837
[2025-07-29 08:41:12] 2025-07-29 06:40:38,161 | INFO     | current memory leak: -12.96 B/s (using 214 data points, chi2=0.31)
[2025-07-29 08:41:12] 2025-07-29 06:40:38,161 | INFO     | could have reported an average CPU frequency of 2519 MHz (12 samples)
[2025-07-29 08:41:12] 2025-07-29 06:40:38,161 | INFO     | ..............................
[2025-07-29 08:41:12] 2025-07-29 06:40:38,162 | INFO     | . Timing measurements:
[2025-07-29 08:41:12] 2025-07-29 06:40:38,162 | INFO     | . get job = 0 s
[2025-07-29 08:41:12] 2025-07-29 06:40:38,162 | INFO     | . initial setup = 1 s
[2025-07-29 08:41:12] 2025-07-29 06:40:38,162 | INFO     | . payload setup = 6 s
[2025-07-29 08:41:12] 2025-07-29 06:40:38,162 | INFO     | . stage-in = 0 s
[2025-07-29 08:41:12] 2025-07-29 06:40:38,162 | INFO     | . payload execution = 14903 s
[2025-07-29 08:41:12] 2025-07-29 06:40:38,162 | INFO     | . stage-out = 1 s
[2025-07-29 08:41:12] 2025-07-29 06:40:38,162 | INFO     | . log creation = 0 s
[2025-07-29 08:41:12] 2025-07-29 06:40:38,162 | INFO     | ..............................
[2025-07-29 08:41:12] 2025-07-29 06:40:38,706 | WARNING  | process 191620 can no longer be monitored (due to stat problems) - aborting
[2025-07-29 08:41:12] 2025-07-29 06:40:38,707 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6745058198/memory_monitor_summary.json (trf name=prmon)
[2025-07-29 08:41:12] 2025-07-29 06:40:38,749 | INFO     | 
[2025-07-29 08:41:12] 2025-07-29 06:40:38,750 | INFO     | job summary report
[2025-07-29 08:41:12] 2025-07-29 06:40:38,750 | INFO     | --------------------------------------------------
[2025-07-29 08:41:12] 2025-07-29 06:40:38,750 | INFO     | PanDA job id: 6745058198
[2025-07-29 08:41:12] 2025-07-29 06:40:38,750 | INFO     | task id: 45743349
[2025-07-29 08:41:12] 2025-07-29 06:40:38,750 | INFO     | errors: (none)
[2025-07-29 08:41:12] 2025-07-29 06:40:38,750 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 08:41:12] 2025-07-29 06:40:38,751 | INFO     | pilot state: finished 
[2025-07-29 08:41:12] 2025-07-29 06:40:38,751 | INFO     | transexitcode: 0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,751 | INFO     | exeerrorcode: 0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,751 | INFO     | exeerrordiag: 
[2025-07-29 08:41:12] 2025-07-29 06:40:38,751 | INFO     | exitcode: 0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,751 | INFO     | exitmsg: OK
[2025-07-29 08:41:12] 2025-07-29 06:40:38,751 | INFO     | cpuconsumptiontime: 57444 s
[2025-07-29 08:41:12] 2025-07-29 06:40:38,751 | INFO     | nevents: 400
[2025-07-29 08:41:12] 2025-07-29 06:40:38,752 | INFO     | neventsw: 0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,752 | INFO     | pid: 191620
[2025-07-29 08:41:12] 2025-07-29 06:40:38,752 | INFO     | pgrp: 191620
[2025-07-29 08:41:12] 2025-07-29 06:40:38,752 | INFO     | corecount: 4
[2025-07-29 08:41:12] 2025-07-29 06:40:38,752 | INFO     | event service: False
[2025-07-29 08:41:12] 2025-07-29 06:40:38,752 | INFO     | sizes: {0: 2391745, 1: 2391944, 4: 2392206, 12: 2392234, 14914: 2423292, 14916: 2432496, 14920: 2432634}
[2025-07-29 08:41:12] 2025-07-29 06:40:38,752 | INFO     | --------------------------------------------------
[2025-07-29 08:41:12] 2025-07-29 06:40:38,752 | INFO     | 
[2025-07-29 08:41:12] 2025-07-29 06:40:38,753 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-07-29 08:41:12] 2025-07-29 06:40:38,772 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,772 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,772 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,773 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 08:41:12] 2025-07-29 06:40:38,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 08:41:12] 2025-07-29 06:40:38,776 | INFO     | job 6745058198 has completed (purged errors)
[2025-07-29 08:41:12] 2025-07-29 06:40:38,776 | INFO     | overall cleanup function is called
[2025-07-29 08:41:12] 2025-07-29 06:40:39,013 | INFO     | number of running child processes to parent process 191620: 1
[2025-07-29 08:41:12] 2025-07-29 06:40:39,014 | INFO     | maximum number of monitored processes: 6
[2025-07-29 08:41:12] 2025-07-29 06:40:39,014 | INFO     | aborting job monitoring since job object (job id=6745058198) has expired
[2025-07-29 08:41:12] 2025-07-29 06:40:39,785 | INFO     | --- collectZombieJob: --- 10, [191620]
[2025-07-29 08:41:12] 2025-07-29 06:40:39,786 | INFO     | zombie collector waiting for pid 191620
[2025-07-29 08:41:12] 2025-07-29 06:40:39,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 08:41:12] 2025-07-29 06:40:39,786 | INFO     | collected zombie processes
[2025-07-29 08:41:12] 2025-07-29 06:40:39,786 | INFO     | will attempt to kill all subprocesses of pid=191620
[2025-07-29 08:41:12] 2025-07-29 06:40:40,069 | INFO     | process IDs to be killed: [191620] (in reverse order)
[2025-07-29 08:41:12] 2025-07-29 06:40:40,153 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 08:41:12] 2025-07-29 06:40:40,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 08:41:12] 2025-07-29 06:40:40,161 | INFO     | did not find any defunct processes belonging to 191620
[2025-07-29 08:41:12] 2025-07-29 06:40:40,167 | INFO     | did not find any defunct processes belonging to 191620
[2025-07-29 08:41:12] 2025-07-29 06:40:40,168 | INFO     | ready for new job
[2025-07-29 08:41:12] 2025-07-29 06:40:40,168 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 08:41:12] 2025-07-29 06:40:40,170 | INFO     | ***************************************
[2025-07-29 08:41:12] 2025-07-29 06:40:40,171 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 08:41:12] 2025-07-29 06:40:40,171 | INFO     | ***************************************
[2025-07-29 08:41:12] 2025-07-29 06:40:40,171 | INFO     | 
[2025-07-29 08:41:12] 2025-07-29 06:40:40,173 | INFO     | architecture information:
[2025-07-29 08:41:12] 2025-07-29 06:40:40,173 | INFO     | executing command: cat /etc/os-release
[2025-07-29 08:41:12] 2025-07-29 06:40:40,186 | INFO     | cat /etc/os-release:
[2025-07-29 08:41:12] NAME="CentOS Linux"
[2025-07-29 08:41:12] VERSION="7 (Core)"
[2025-07-29 08:41:12] ID="centos"
[2025-07-29 08:41:12] ID_LIKE="rhel fedora"
[2025-07-29 08:41:12] VERSION_ID="7"
[2025-07-29 08:41:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 08:41:12] ANSI_COLOR="0;31"
[2025-07-29 08:41:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 08:41:12] HOME_URL="https://www.centos.org/"
[2025-07-29 08:41:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 08:41:12] 
[2025-07-29 08:41:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 08:41:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 08:41:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 08:41:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 08:41:12] 
[2025-07-29 08:41:12] 2025-07-29 06:40:40,187 | INFO     | ***************************************
[2025-07-29 08:41:12] 2025-07-29 06:40:40,690 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-07-29 08:41:12] 2025-07-29 06:40:40,704 | INFO     | sufficient remaining disk space (1669729353728 B)
[2025-07-29 08:41:12] 2025-07-29 06:40:40,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 08:41:12] 2025-07-29 06:40:40,705 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 08:41:12] 2025-07-29 06:40:40,705 | INFO     | update_server=False
[2025-07-29 08:41:12] 2025-07-29 06:40:40,705 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 08:41:12] 2025-07-29 06:40:40,705 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 08:41:12] 2025-07-29 06:40:40,706 | INFO     | aborting loop
[2025-07-29 08:41:12] 2025-07-29 06:40:40,706 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 08:41:12] 2025-07-29 06:40:41,286 | INFO     | all payload control threads have been joined
[2025-07-29 08:41:12] 2025-07-29 06:40:41,706 | INFO     | [job] retrieve thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:41,710 | INFO     | [job] job monitor thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:41,760 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:41,788 | INFO     | all data control threads have been joined
[2025-07-29 08:41:12] 2025-07-29 06:40:41,925 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 08:41:12] 2025-07-29 06:40:41,984 | INFO     | all job control threads have been joined
[2025-07-29 08:41:12] 2025-07-29 06:40:41,991 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:42,021 | INFO     | [payload] failed_post thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:42,291 | INFO     | [payload] control thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:42,343 | INFO     | [data] copytool_in thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:42,526 | INFO     | [job] validate thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:42,754 | INFO     | [payload] validate_post thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:42,792 | INFO     | [data] control thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:42,989 | INFO     | [job] control thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:43,043 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:43,317 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 08:41:12] 2025-07-29 06:40:43,928 | INFO     | [data] copytool_out thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:44,323 | INFO     | [job] queue monitor thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:44,708 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:50,935 | INFO     | job.realtimelogging is not enabled
[2025-07-29 08:41:12] 2025-07-29 06:40:51,940 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 08:41:12] 2025-07-29 06:40:52,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22910494549824)>', '<ExcThread(monitor, started 22910255200000)>']
[2025-07-29 08:41:12] 2025-07-29 06:40:57,944 | INFO     | all workflow threads have been joined
[2025-07-29 08:41:12] 2025-07-29 06:40:57,944 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 08:41:12] 2025-07-29 06:40:57,944 | INFO     | traces error code: 0
[2025-07-29 08:41:12] 2025-07-29 06:40:57,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 08:41:12] 2025-07-29 06:41:11,794 | INFO     | PID=184800 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-29 08:41:12] 2025-07-29 06:41:11,794 | INFO     | .. there are 7 such processes running
[2025-07-29 08:41:12] 2025-07-29 06:41:11,795 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 08:41:12] 2025-07-29 06:41:11,795 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 08:41:12] 2025-07-29 06:41:11,795 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 08:41:12] 2025-07-29 06:41:11,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 08:41:12] 2025-07-29 06:41:11,795 | INFO     | [monitor] control thread has ended
[2025-07-29 08:41:12] 2025-07-29 06:41:11,911 [wrapper] ==== pilot stdout END ====
[2025-07-29 08:41:12] 2025-07-29 06:41:11,914 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 08:41:12] 2025-07-29 06:41:11,917 [wrapper] pilotpid: 184800
[2025-07-29 08:41:12] 2025-07-29 06:41:11,919 [wrapper] Pilot exit status: 0
[2025-07-29 08:41:12] 2025-07-29 06:41:11,928 [wrapper] pandaids: 6745058198
[2025-07-29 08:41:12] 2025-07-29 06:41:11,976 [wrapper] cleanup supervisor_pilot  532641 184801
[2025-07-29 08:41:12] 2025-07-29 06:41:11,979 [wrapper] Test setup, not cleaning
[2025-07-29 08:41:12] 2025-07-29 06:41:11,982 [wrapper] apfmon messages muted
[2025-07-29 08:41:12] 2025-07-29 06:41:11,984 [wrapper] ==== wrapper stdout END ====
[2025-07-29 08:41:12] 2025-07-29 06:41:11,987 [wrapper] ==== wrapper stderr END ====
[2025-07-29 08:41:12]  *** Error codes and diagnostics ***
[2025-07-29 08:41:12]     "exeErrorCode": 0,
[2025-07-29 08:41:12]     "exeErrorDiag": "",
[2025-07-29 08:41:12]     "pilotErrorCode": 0,
[2025-07-29 08:41:12]     "pilotErrorDiag": "",
[2025-07-29 08:41:12]  *** Listing of results directory ***
[2025-07-29 08:41:12] total 357068
[2025-07-29 08:41:12] -rw-r--r-- 1 boinc boinc      5112 Jul 25 18:22 queuedata.json
[2025-07-29 08:41:12] -rw-r--r-- 1 boinc boinc    530466 Jul 25 18:23 pilot3.tar.gz
[2025-07-29 08:41:12] -rwx------ 1 boinc boinc     36292 Jul 25 18:24 runpilot2-wrapper.sh
[2025-07-29 08:41:12] -rw-r--r-- 1 boinc boinc       100 Jul 29 04:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 08:41:12] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 04:31 run_atlas
[2025-07-29 08:41:12] -rw-r--r-- 1 boinc boinc       105 Jul 29 04:31 job.xml
[2025-07-29 08:41:12] -rw-r--r-- 1 boinc boinc      6422 Jul 29 04:31 init_data.xml
[2025-07-29 08:41:12] -rw-r--r-- 2 boinc boinc 149540866 Jul 29 04:31 EVNT.45743347._001341.pool.root.1
[2025-07-29 08:41:12] drwxrwx--x 2 boinc boinc      4096 Jul 29 04:31 shared
[2025-07-29 08:41:12] -rw-r--r-- 2 boinc boinc    542891 Jul 29 04:31 input.tar.gz
[2025-07-29 08:41:12] -rw-r--r-- 2 boinc boinc     15095 Jul 29 04:31 start_atlas.sh
[2025-07-29 08:41:12] -rw-r--r-- 1 boinc boinc         0 Jul 29 04:31 boinc_lockfile
[2025-07-29 08:41:12] -rw-r--r-- 1 boinc boinc      2561 Jul 29 04:31 pandaJob.out
[2025-07-29 08:41:12] -rw------- 1 boinc boinc    977340 Jul 29 04:31 agis_schedconf.cvmfs.json
[2025-07-29 08:41:12] drwx------ 4 boinc boinc      4096 Jul 29 04:31 pilot3
[2025-07-29 08:41:12] -rw------- 1 boinc boinc 208757411 Jul 29 08:39 HITS.45743349._023703.pool.root.1
[2025-07-29 08:41:12] -rw-r--r-- 1 boinc boinc       529 Jul 29 08:40 boinc_task_state.xml
[2025-07-29 08:41:12] -rw------- 1 boinc boinc      1038 Jul 29 08:40 memory_monitor_summary.json
[2025-07-29 08:41:12] -rw------- 1 boinc boinc        95 Jul 29 08:40 pilot_heartbeat.json
[2025-07-29 08:41:12] -rw------- 1 boinc boinc   1589827 Jul 29 08:40 agis_ddmendpoints.agis.ALL.json
[2025-07-29 08:41:12] -rw------- 1 boinc boinc    332656 Jul 29 08:40 log.45743349._023703.job.log.tgz.1
[2025-07-29 08:41:12] -rw------- 1 boinc boinc      7829 Jul 29 08:40 heartbeat.json
[2025-07-29 08:41:12] -rw-r--r-- 1 boinc boinc      8192 Jul 29 08:40 boinc_mmap_file
[2025-07-29 08:41:12] -rw-r--r-- 1 boinc boinc        27 Jul 29 08:40 wrapper_checkpoint.txt
[2025-07-29 08:41:12] -rw------- 1 boinc boinc       821 Jul 29 08:41 pilotlog.txt
[2025-07-29 08:41:12] -rw------- 1 boinc boinc   1396815 Jul 29 08:41 log.45743349._023703.job.log.1
[2025-07-29 08:41:12] -rw------- 1 boinc boinc       357 Jul 29 08:41 output.list
[2025-07-29 08:41:12] -rw-r--r-- 1 boinc boinc       620 Jul 29 08:41 runtime_log
[2025-07-29 08:41:12] -rw------- 1 boinc boinc   1751040 Jul 29 08:41 result.tar.gz
[2025-07-29 08:41:12] -rw-r--r-- 1 boinc boinc      9027 Jul 29 08:41 runtime_log.err
[2025-07-29 08:41:12] -rw------- 1 boinc boinc       665 Jul 29 08:41 RzSNDmuOaz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaDzKDmbhZTgn.diag
[2025-07-29 08:41:12] -rw-r--r-- 1 boinc boinc     20824 Jul 29 08:41 stderr.txt
[2025-07-29 08:41:12] HITS file was successfully produced:
[2025-07-29 08:41:12] -rw------- 1 boinc boinc 208757411 Jul 29 08:39 shared/HITS.pool.root.1
[2025-07-29 08:41:12]  *** Contents of shared directory: ***
[2025-07-29 08:41:12] total 352172
[2025-07-29 08:41:12] -rw-r--r-- 2 boinc boinc 149540866 Jul 29 04:31 ATLAS.root_0
[2025-07-29 08:41:12] -rw-r--r-- 2 boinc boinc    542891 Jul 29 04:31 input.tar.gz
[2025-07-29 08:41:12] -rw-r--r-- 2 boinc boinc     15095 Jul 29 04:31 start_atlas.sh
[2025-07-29 08:41:12] -rw------- 1 boinc boinc 208757411 Jul 29 08:39 HITS.pool.root.1
[2025-07-29 08:41:12] -rw------- 1 boinc boinc   1751040 Jul 29 08:41 result.tar.gz
08:41:13 (181184): run_atlas exited; CPU time 57965.507843
08:41:13 (181184): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN