Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:43:37 (3017124): wrapper (7.7.26015): starting
08:43:37 (3017124): wrapper: running run_atlas (--nthreads 3)
[2025-07-26 08:43:37] Arguments: --nthreads 3
[2025-07-26 08:43:37] Threads: 3
[2025-07-26 08:43:37] Checking for CVMFS
[2025-07-26 08:43:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 08:43:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 08:43:37] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 08:43:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 08:43:37] 2.9.2.0 1482799 6098 84760 148767 0 57 20583448 36864000 0 130560 0 4069341 99.988 229519 1951 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-26 08:43:37] CVMFS is ok
[2025-07-26 08:43:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 08:43:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 08:43:37] Further information can be found at the LHC@home message board.
[2025-07-26 08:43:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 08:43:37] Checking for apptainer binary...
[2025-07-26 08:43:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 08:43:37] Running /usr/bin/apptainer --version
[2025-07-26 08:43:37] apptainer version 1.4.1-1.1
[2025-07-26 08:43:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 08:43:37] thA367a
[2025-07-26 08:43:37] apptainer works
[2025-07-26 08:43:37] Set ATHENA_PROC_NUMBER=3
[2025-07-26 08:43:37] Set ATHENA_CORE_NUMBER=3
[2025-07-26 08:43:37] Starting ATLAS job with PandaID=6745058120
[2025-07-26 08:43:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 10:17:23]  *** The last 200 lines of the pilot log: ***
[2025-07-26 10:17:23]  is_tar=False
[2025-07-26 10:17:23]  lfn=log.45743349._023626.job.log.tgz.1
[2025-07-26 10:17:23]  mtime=0
[2025-07-26 10:17:23]  protocol_id=None
[2025-07-26 10:17:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 10:17:23]  replicas=None
[2025-07-26 10:17:23]  scope=mc23_13p6TeV
[2025-07-26 10:17:23]  status=None
[2025-07-26 10:17:23]  status_code=0
[2025-07-26 10:17:23]  storage_token=
[2025-07-26 10:17:23]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745058120/log.45743349._023626.job.log.tgz.1
[2025-07-26 10:17:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/a3/log.45743349._023626.job.log.tgz.1
[2025-07-26 10:17:23]  workdir=None
[2025-07-26 10:17:23] ]
[2025-07-26 10:17:23] 2025-07-26 08:16:47,331 | INFO     | transferring file log.45743349._023626.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745058120/log.45743349._023626.job.log.tgz.1 to /local/data/boinc/
[2025-07-26 10:17:23] 2025-07-26 08:16:47,331 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745058120/log.45743349._023626.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0236
[2025-07-26 10:17:23] 2025-07-26 08:16:47,343 | INFO     | adding to output.list: log.45743349._023626.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/a3/log.45743349._023626.job.log.tg
[2025-07-26 10:17:23] 2025-07-26 08:16:47,344 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 10:17:23] 2025-07-26 08:16:47,344 | INFO     | summary of transferred files:
[2025-07-26 10:17:23] 2025-07-26 08:16:47,344 | INFO     |  -- lfn=log.45743349._023626.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 10:17:23] 2025-07-26 08:16:47,344 | INFO     | stage-out finished correctly
[2025-07-26 10:17:23] 2025-07-26 08:16:48,163 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 10:17:23] 2025-07-26 08:16:48,195 | INFO     | job 6745058120 has state=finished
[2025-07-26 10:17:23] 2025-07-26 08:16:48,195 | INFO     | preparing for final server update for job 6745058120 in state='finished'
[2025-07-26 10:17:23] 2025-07-26 08:16:48,195 | INFO     | this job has now completed (state=finished)
[2025-07-26 10:17:23] 2025-07-26 08:16:48,195 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 10:17:23] 2025-07-26 08:16:48,196 | INFO     | log transfer has been attempted: DONE
[2025-07-26 10:17:23] 2025-07-26 08:16:48,196 | INFO     | job 6745058120 has finished - writing final server update
[2025-07-26 10:17:23] 2025-07-26 08:16:48,196 | INFO     | total number of processed events: 400 (read)
[2025-07-26 10:17:23] 2025-07-26 08:16:48,196 | INFO     | executing command: lscpu
[2025-07-26 10:17:23] 2025-07-26 08:16:48,208 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 10:17:23] 2025-07-26 08:16:50,367 | WARNING  | process 3027252 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 10:17:23] 2025-07-26 08:16:50,367 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 10:17:23] 2025-07-26 08:16:50,367 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745058120/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 10:17:23] 2025-07-26 08:16:50,369 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3926.0116666666668
[2025-07-26 10:17:23] 2025-07-26 08:16:50,370 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745058120/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 10:17:23] 2025-07-26 08:16:50,370 | INFO     | extracted standard info from prmon json
[2025-07-26 10:17:23] 2025-07-26 08:16:50,370 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 10:17:23] 2025-07-26 08:16:50,370 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 10:17:23] 2025-07-26 08:16:50,370 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 10:17:23] 2025-07-26 08:16:50,370 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 10:17:23] 2025-07-26 08:16:50,371 | INFO     | fitting pss+swap vs Time
[2025-07-26 10:17:23] 2025-07-26 08:16:50,371 | INFO     | sum of square deviations: 190403570.0
[2025-07-26 10:17:23] 2025-07-26 08:16:50,371 | INFO     | sum of deviations: -15168174416.999998
[2025-07-26 10:17:23] 2025-07-26 08:16:50,371 | INFO     | mean x: 1753515109.0
[2025-07-26 10:17:23] 2025-07-26 08:16:50,371 | INFO     | mean y: 2462230.6
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | -- intersect: 139693241222.59454
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | intersect: 139693241222.59454
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | chi2: 0.11547795281497521
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | -- intersect: 139693241222.59454
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | current memory leak: -79.66 B/s (using 85 data points, chi2=0.12)
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | could have reported an average CPU frequency of 3855 MHz (7 samples)
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | ..............................
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | . Timing measurements:
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | . get job = 0 s
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | . initial setup = 1 s
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | . payload setup = 3 s
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | . stage-in = 0 s
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | . payload execution = 5563 s
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | . stage-out = 0 s
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | . log creation = 0 s
[2025-07-26 10:17:23] 2025-07-26 08:16:50,372 | INFO     | ..............................
[2025-07-26 10:17:23] 2025-07-26 08:16:50,437 | INFO     | number of running child processes to parent process 3027252: 1
[2025-07-26 10:17:23] 2025-07-26 08:16:50,437 | INFO     | maximum number of monitored processes: 6
[2025-07-26 10:17:23] 2025-07-26 08:16:50,437 | INFO     | aborting job monitoring since job object (job id=6745058120) has expired
[2025-07-26 10:17:23] 2025-07-26 08:16:50,728 | INFO     | 
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | job summary report
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | --------------------------------------------------
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | PanDA job id: 6745058120
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | task id: 45743349
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | errors: (none)
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | pilot state: finished 
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | transexitcode: 0
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | exeerrorcode: 0
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | exeerrordiag: 
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | exitcode: 0
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | exitmsg: OK
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | cpuconsumptiontime: 16059 s
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | nevents: 400
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | neventsw: 0
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | pid: 3027252
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | pgrp: 3027252
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | corecount: 3
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | event service: False
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | sizes: {0: 2397474, 2: 2397736, 11: 2397764, 5570: 2424548, 5571: 2433552, 5572: 2433608, 5574: 2433930}
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | --------------------------------------------------
[2025-07-26 10:17:23] 2025-07-26 08:16:50,729 | INFO     | 
[2025-07-26 10:17:23] 2025-07-26 08:16:50,730 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-26 10:17:23] 2025-07-26 08:16:50,743 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | job 6745058120 has completed (purged errors)
[2025-07-26 10:17:23] 2025-07-26 08:16:50,744 | INFO     | overall cleanup function is called
[2025-07-26 10:17:23] 2025-07-26 08:16:51,751 | INFO     | --- collectZombieJob: --- 10, [3027252]
[2025-07-26 10:17:23] 2025-07-26 08:16:51,751 | INFO     | zombie collector waiting for pid 3027252
[2025-07-26 10:17:23] 2025-07-26 08:16:51,751 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 10:17:23] 2025-07-26 08:16:51,752 | INFO     | collected zombie processes
[2025-07-26 10:17:23] 2025-07-26 08:16:51,752 | INFO     | will attempt to kill all subprocesses of pid=3027252
[2025-07-26 10:17:23] 2025-07-26 08:16:51,793 | INFO     | process IDs to be killed: [3027252] (in reverse order)
[2025-07-26 10:17:23] 2025-07-26 08:16:51,815 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 10:17:23] 2025-07-26 08:16:51,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 10:17:23] 2025-07-26 08:16:51,817 | INFO     | did not find any defunct processes belonging to 3027252
[2025-07-26 10:17:23] 2025-07-26 08:16:51,818 | INFO     | did not find any defunct processes belonging to 3027252
[2025-07-26 10:17:23] 2025-07-26 08:16:51,818 | INFO     | ready for new job
[2025-07-26 10:17:23] 2025-07-26 08:16:51,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 10:17:23] 2025-07-26 08:16:51,819 | INFO     | ***************************************
[2025-07-26 10:17:23] 2025-07-26 08:16:51,819 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 10:17:23] 2025-07-26 08:16:51,819 | INFO     | ***************************************
[2025-07-26 10:17:23] 2025-07-26 08:16:51,819 | INFO     | 
[2025-07-26 10:17:23] 2025-07-26 08:16:51,819 | INFO     | architecture information:
[2025-07-26 10:17:23] 2025-07-26 08:16:51,819 | INFO     | executing command: cat /etc/os-release
[2025-07-26 10:17:23] 2025-07-26 08:16:51,827 | INFO     | cat /etc/os-release:
[2025-07-26 10:17:23] NAME="CentOS Linux"
[2025-07-26 10:17:23] VERSION="7 (Core)"
[2025-07-26 10:17:23] ID="centos"
[2025-07-26 10:17:23] ID_LIKE="rhel fedora"
[2025-07-26 10:17:23] VERSION_ID="7"
[2025-07-26 10:17:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 10:17:23] ANSI_COLOR="0;31"
[2025-07-26 10:17:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 10:17:23] HOME_URL="https://www.centos.org/"
[2025-07-26 10:17:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 10:17:23] 
[2025-07-26 10:17:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 10:17:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 10:17:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 10:17:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 10:17:23] 
[2025-07-26 10:17:23] 2025-07-26 08:16:51,827 | INFO     | ***************************************
[2025-07-26 10:17:23] 2025-07-26 08:16:52,331 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-26 10:17:23] 2025-07-26 08:16:52,343 | INFO     | sufficient remaining disk space (239546138624 B)
[2025-07-26 10:17:23] 2025-07-26 08:16:52,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 10:17:23] 2025-07-26 08:16:52,343 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 10:17:23] 2025-07-26 08:16:52,343 | INFO     | update_server=False
[2025-07-26 10:17:23] 2025-07-26 08:16:52,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 10:17:23] 2025-07-26 08:16:52,343 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 10:17:23] 2025-07-26 08:16:52,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 10:17:23] 2025-07-26 08:16:52,343 | INFO     | aborting loop
[2025-07-26 10:17:23] 2025-07-26 08:16:52,506 | INFO     | all payload control threads have been joined
[2025-07-26 10:17:23] 2025-07-26 08:16:52,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 10:17:23] 2025-07-26 08:16:53,262 | INFO     | all job control threads have been joined
[2025-07-26 10:17:23] 2025-07-26 08:16:53,349 | INFO     | [job] queue monitor thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:53,349 | INFO     | [job] retrieve thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:53,349 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:53,349 | INFO     | [job] job monitor thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:53,358 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:53,382 | INFO     | all data control threads have been joined
[2025-07-26 10:17:23] 2025-07-26 08:16:53,512 | INFO     | [payload] control thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:53,554 | INFO     | [payload] validate_post thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:54,073 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:54,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 10:17:23] 2025-07-26 08:16:54,224 | INFO     | [data] copytool_in thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:54,268 | INFO     | [job] control thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:54,388 | INFO     | [data] control thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:54,633 | INFO     | [payload] failed_post thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:54,720 | INFO     | [job] validate thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:54,892 | INFO     | [data] copytool_out thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:16:58,209 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:17:02,440 | INFO     | job.realtimelogging is not enabled
[2025-07-26 10:17:23] 2025-07-26 08:17:03,445 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 10:17:23] 2025-07-26 08:17:05,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140323626243904)>', '<ExcThread(monitor, started 140323007223552)>']
[2025-07-26 10:17:23] 2025-07-26 08:17:10,553 | INFO     | all workflow threads have been joined
[2025-07-26 10:17:23] 2025-07-26 08:17:10,553 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 10:17:23] 2025-07-26 08:17:10,554 | INFO     | traces error code: 0
[2025-07-26 10:17:23] 2025-07-26 08:17:10,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 10:17:23] 2025-07-26 08:17:22,953 | INFO     | PID=3020763 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 10:17:23] 2025-07-26 08:17:22,954 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 10:17:23] 2025-07-26 08:17:22,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 10:17:23] 2025-07-26 08:17:22,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 10:17:23] 2025-07-26 08:17:22,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 10:17:23] 2025-07-26 08:17:22,954 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 10:17:23] 2025-07-26 08:17:22,954 | INFO     | [monitor] control thread has ended
[2025-07-26 10:17:23] 2025-07-26 08:17:22,999 [wrapper] ==== pilot stdout END ====
[2025-07-26 10:17:23] 2025-07-26 08:17:23,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 10:17:23] 2025-07-26 08:17:23,004 [wrapper] pilotpid: 3020763
[2025-07-26 10:17:23] 2025-07-26 08:17:23,006 [wrapper] Pilot exit status: 0
[2025-07-26 10:17:23] 2025-07-26 08:17:23,013 [wrapper] pandaids: 6745058120
[2025-07-26 10:17:23] 2025-07-26 08:17:23,028 [wrapper] cleanup supervisor_pilot 3039474 3020764
[2025-07-26 10:17:23] 2025-07-26 08:17:23,031 [wrapper] Test setup, not cleaning
[2025-07-26 10:17:23] 2025-07-26 08:17:23,033 [wrapper] apfmon messages muted
[2025-07-26 10:17:23] 2025-07-26 08:17:23,035 [wrapper] ==== wrapper stdout END ====
[2025-07-26 10:17:23] 2025-07-26 08:17:23,037 [wrapper] ==== wrapper stderr END ====
[2025-07-26 10:17:23]  *** Error codes and diagnostics ***
[2025-07-26 10:17:23]     "exeErrorCode": 0,
[2025-07-26 10:17:23]     "exeErrorDiag": "",
[2025-07-26 10:17:23]     "pilotErrorCode": 0,
[2025-07-26 10:17:23]     "pilotErrorDiag": "",
[2025-07-26 10:17:23]  *** Listing of results directory ***
[2025-07-26 10:17:23] total 354028
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc    530466 Jul 25 17:55 pilot3.tar.gz
[2025-07-26 10:17:23] -rwx------ 1 boinc boinc     36292 Jul 25 18:16 runpilot2-wrapper.sh
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc      5112 Jul 25 18:16 queuedata.json
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc       100 Jul 26 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 10:17:23] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 08:43 run_atlas
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc       105 Jul 26 08:43 job.xml
[2025-07-26 10:17:23] -rw-r--r-- 2 boinc boinc 145212161 Jul 26 08:43 EVNT.45743347._001336.pool.root.1
[2025-07-26 10:17:23] drwxrwx--x 2 boinc boinc      4096 Jul 26 08:43 shared
[2025-07-26 10:17:23] -rw-r--r-- 2 boinc boinc    542878 Jul 26 08:43 input.tar.gz
[2025-07-26 10:17:23] -rw-r--r-- 2 boinc boinc     15095 Jul 26 08:43 start_atlas.sh
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc         0 Jul 26 08:43 boinc_setup_complete
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc      6518 Jul 26 08:43 init_data.xml
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc         0 Jul 26 08:43 boinc_lockfile
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc      2561 Jul 26 08:43 pandaJob.out
[2025-07-26 10:17:23] -rw------- 1 boinc boinc    980001 Jul 26 08:43 agis_schedconf.cvmfs.json
[2025-07-26 10:17:23] -rw------- 1 boinc boinc   1593052 Jul 26 08:43 agis_ddmendpoints.agis.ALL.json
[2025-07-26 10:17:23] drwx------ 4 boinc boinc      4096 Jul 26 08:43 pilot3
[2025-07-26 10:17:23] -rw------- 1 boinc boinc 211916060 Jul 26 10:16 HITS.45743349._023626.pool.root.1
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc       530 Jul 26 10:16 boinc_task_state.xml
[2025-07-26 10:17:23] -rw------- 1 boinc boinc      1025 Jul 26 10:16 memory_monitor_summary.json
[2025-07-26 10:17:23] -rw------- 1 boinc boinc    223773 Jul 26 10:16 log.45743349._023626.job.log.tgz.1
[2025-07-26 10:17:23] -rw------- 1 boinc boinc      7766 Jul 26 10:16 heartbeat.json
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc      8192 Jul 26 10:17 boinc_mmap_file
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc        27 Jul 26 10:17 wrapper_checkpoint.txt
[2025-07-26 10:17:23] -rw------- 1 boinc boinc       817 Jul 26 10:17 pilotlog.txt
[2025-07-26 10:17:23] -rw------- 1 boinc boinc        95 Jul 26 10:17 pilot_heartbeat.json
[2025-07-26 10:17:23] -rw------- 1 boinc boinc    539353 Jul 26 10:17 log.45743349._023626.job.log.1
[2025-07-26 10:17:23] -rw------- 1 boinc boinc       357 Jul 26 10:17 output.list
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc       620 Jul 26 10:17 runtime_log
[2025-07-26 10:17:23] -rw------- 1 boinc boinc    778240 Jul 26 10:17 result.tar.gz
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc      8739 Jul 26 10:17 runtime_log.err
[2025-07-26 10:17:23] -rw------- 1 boinc boinc       660 Jul 26 10:17 jPlMDm5Gaz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQwPLDmfaBHvm.diag
[2025-07-26 10:17:23] -rw-r--r-- 1 boinc boinc     21547 Jul 26 10:17 stderr.txt
[2025-07-26 10:17:23] HITS file was successfully produced:
[2025-07-26 10:17:23] -rw------- 1 boinc boinc 211916060 Jul 26 10:16 shared/HITS.pool.root.1
[2025-07-26 10:17:23]  *** Contents of shared directory: ***
[2025-07-26 10:17:23] total 350076
[2025-07-26 10:17:23] -rw-r--r-- 2 boinc boinc 145212161 Jul 26 08:43 ATLAS.root_0
[2025-07-26 10:17:23] -rw-r--r-- 2 boinc boinc    542878 Jul 26 08:43 input.tar.gz
[2025-07-26 10:17:23] -rw-r--r-- 2 boinc boinc     15095 Jul 26 08:43 start_atlas.sh
[2025-07-26 10:17:23] -rw------- 1 boinc boinc 211916060 Jul 26 10:16 HITS.pool.root.1
[2025-07-26 10:17:23] -rw------- 1 boinc boinc    778240 Jul 26 10:17 result.tar.gz
10:17:24 (3017124): run_atlas exited; CPU time 16075.677429
10:17:24 (3017124): called boinc_finish(0)

</stderr_txt>
]]>

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