Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:02:15 (955962): wrapper (7.7.26015): starting
12:02:15 (955962): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 12:02:15] Arguments: --nthreads 12
[2025-07-25 12:02:15] Threads: 12
[2025-07-25 12:02:15] Checking for CVMFS
[2025-07-25 12:02:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 12:02:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 12:02:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 12:02:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 12:02:16] 2.11.5.0 6885 34658 341324 148750 3 783 30340155 45568001 15745 130560 0 293099221 99.775 203112775 24135 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-25 12:02:16] CVMFS is ok
[2025-07-25 12:02:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 12:02:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 12:02:16] Further information can be found at the LHC@home message board.
[2025-07-25 12:02:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 12:02:16] Checking for apptainer binary...
[2025-07-25 12:02:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 12:02:16] Running /usr/bin/apptainer --version
[2025-07-25 12:02:16] apptainer version 1.4.1-1.el9
[2025-07-25 12:02:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 12:02:17] wns0076.triumf.lcg
[2025-07-25 12:02:17] apptainer works
[2025-07-25 12:02:17] Set ATHENA_PROC_NUMBER=12
[2025-07-25 12:02:17] Set ATHENA_CORE_NUMBER=12
[2025-07-25 12:02:17] Starting ATLAS job with PandaID=6745058106
[2025-07-25 12:02:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 12:06:37]  *** The last 200 lines of the pilot log: ***
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | WARNING  | wrong length of table data, x=[1753470212.0], y=[1063.0] (must be same and length>=4)
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | could have reported an average CPU frequency of 2393 MHz (4 samples)
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | ..............................
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . Timing measurements:
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . get job = 0 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . initial setup = 3 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . payload setup = 10 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . stage-in = 0 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . payload execution = 28 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . stage-out = 0 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . log creation = 0 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | ..............................
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 12:06:37] 2025-07-25 19:06:03,697 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745058106/pilotlog.txt
[2025-07-25 12:06:37] 2025-07-25 19:06:03,713 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 12:06:37] - Log from pilotlog.txt -
[2025-07-25 12:06:37] 2025-07-25 19:06:03,694 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745058106/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | INFO     | extracted standard info from prmon json
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | WARNING  | wrong length of table data, x=[1753470212.0], y=[1063.0] (must be same and length>=4)
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | could have reported an average CPU frequency of 2393 MHz (4 samples)
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | ..............................
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . Timing measurements:
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . get job = 0 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . initial setup = 3 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . payload setup = 10 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . stage-in = 0 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . payload execution = 28 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . stage-out = 0 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . log creation = 0 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | ..............................
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 12:06:37] 2025-07-25 19:06:03,697 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745058106/pilotlog.txt
[2025-07-25 12:06:37] 2025-07-25 19:06:03,713 | WARNING  | 
[2025-07-25 12:06:37] [begin log extracts]
[2025-07-25 12:06:37] - Log from pilotlog.txt -
[2025-07-25 12:06:37] 2025-07-25 19:06:03,694 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745058106/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | INFO     | extracted standard info from prmon json
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:06:37] 2025-07-25 19:06:03,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | WARNING  | wrong length of table data, x=[1753470212.0], y=[1063.0] (must be same and length>=4)
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | could have reported an average CPU frequency of 2393 MHz (4 samples)
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | ..............................
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . Timing measurements:
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . get job = 0 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . initial setup = 3 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . payload setup = 10 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . stage-in = 0 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . payload execution = 28 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . stage-out = 0 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | . log creation = 0 s
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | ..............................
[2025-07-25 12:06:37] 2025-07-25 19:06:03,696 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 12:06:37] 2025-07-25 19:06:03,697 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745058106/pilotlog.txt
[2025-07-25 12:06:37] [end log extracts]
[2025-07-25 12:06:37] 2025-07-25 19:06:03,713 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 12:06:37] 2025-07-25 19:06:03,714 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 12:06:37] 2025-07-25 19:06:04,136 | INFO     | 
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | job summary report
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | --------------------------------------------------
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | PanDA job id: 6745058106
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | task id: 45743349
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 12:03:46,057 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | pilot state: failed 
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | transexitcode: 65
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | exeerrorcode: 65
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | exitcode: 65
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | cpuconsumptiontime: 16 s
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | nevents: 0
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | neventsw: 0
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | pid: 965893
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | pgrp: 965893
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | corecount: 12
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | event service: False
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | sizes: {0: 2397297, 1: 2397496, 12: 2397496, 13: 2397786, 23: 2397842, 43: 2421142, 44: 2425434, 47: 2425462, 172: 2425716}
[2025-07-25 12:06:37] 2025-07-25 19:06:04,137 | INFO     | --------------------------------------------------
[2025-07-25 12:06:37] 2025-07-25 19:06:04,138 | INFO     | 
[2025-07-25 12:06:37] 2025-07-25 19:06:04,138 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 12:06:37] 2025-07-25 19:06:04,151 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,151 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,151 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,151 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,151 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,151 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,151 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,151 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | job 6745058106 has completed (purged errors)
[2025-07-25 12:06:37] 2025-07-25 19:06:04,152 | INFO     | overall cleanup function is called
[2025-07-25 12:06:37] 2025-07-25 19:06:05,164 | INFO     | --- collectZombieJob: --- 10, [965893]
[2025-07-25 12:06:37] 2025-07-25 19:06:05,165 | INFO     | zombie collector waiting for pid 965893
[2025-07-25 12:06:37] 2025-07-25 19:06:05,165 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 12:06:37] 2025-07-25 19:06:05,165 | INFO     | collected zombie processes
[2025-07-25 12:06:37] 2025-07-25 19:06:05,165 | INFO     | will attempt to kill all subprocesses of pid=965893
[2025-07-25 12:06:37] 2025-07-25 19:06:05,445 | INFO     | process IDs to be killed: [965893] (in reverse order)
[2025-07-25 12:06:37] 2025-07-25 19:06:05,511 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 12:06:37] 2025-07-25 19:06:05,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 12:06:37] 2025-07-25 19:06:05,521 | INFO     | did not find any defunct processes belonging to 965893
[2025-07-25 12:06:37] 2025-07-25 19:06:05,547 | INFO     | did not find any defunct processes belonging to 965893
[2025-07-25 12:06:37] 2025-07-25 19:06:05,547 | INFO     | ready for new job
[2025-07-25 12:06:37] 2025-07-25 19:06:05,548 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 12:06:37] 2025-07-25 19:06:05,550 | INFO     | ***************************************
[2025-07-25 12:06:37] 2025-07-25 19:06:05,550 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 12:06:37] 2025-07-25 19:06:05,550 | INFO     | ***************************************
[2025-07-25 12:06:37] 2025-07-25 19:06:05,550 | INFO     | 
[2025-07-25 12:06:37] 2025-07-25 19:06:05,552 | INFO     | architecture information:
[2025-07-25 12:06:37] 2025-07-25 19:06:05,558 | INFO     | executing command: cat /etc/os-release
[2025-07-25 12:06:37] 2025-07-25 19:06:05,621 | INFO     | cat /etc/os-release:
[2025-07-25 12:06:37] NAME="CentOS Linux"
[2025-07-25 12:06:37] VERSION="7 (Core)"
[2025-07-25 12:06:37] ID="centos"
[2025-07-25 12:06:37] ID_LIKE="rhel fedora"
[2025-07-25 12:06:37] VERSION_ID="7"
[2025-07-25 12:06:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 12:06:37] ANSI_COLOR="0;31"
[2025-07-25 12:06:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 12:06:37] HOME_URL="https://www.centos.org/"
[2025-07-25 12:06:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 12:06:37] 
[2025-07-25 12:06:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 12:06:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 12:06:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 12:06:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 12:06:37] 
[2025-07-25 12:06:37] 2025-07-25 19:06:05,621 | INFO     | ***************************************
[2025-07-25 12:06:37] 2025-07-25 19:06:06,130 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 12:06:37] 2025-07-25 19:06:06,154 | INFO     | sufficient remaining disk space (1965177176064 B)
[2025-07-25 12:06:37] 2025-07-25 19:06:06,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 12:06:37] 2025-07-25 19:06:06,154 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 12:06:37] 2025-07-25 19:06:06,154 | INFO     | update_server=False
[2025-07-25 12:06:37] 2025-07-25 19:06:06,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 12:06:37] 2025-07-25 19:06:06,154 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:06:37] 2025-07-25 19:06:06,155 | INFO     | aborting loop
[2025-07-25 12:06:37] 2025-07-25 19:06:06,586 | INFO     | all data control threads have been joined
[2025-07-25 12:06:37] 2025-07-25 19:06:06,783 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 12:06:37] 2025-07-25 19:06:06,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 12:06:37] 2025-07-25 19:06:07,161 | INFO     | [job] retrieve thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:07,162 | INFO     | [job] job monitor thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:07,301 | INFO     | all payload control threads have been joined
[2025-07-25 12:06:37] 2025-07-25 19:06:07,377 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:07,417 | INFO     | all job control threads have been joined
[2025-07-25 12:06:37] 2025-07-25 19:06:07,592 | INFO     | [data] control thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:07,739 | INFO     | [payload] failed_post thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:07,838 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:07,849 | INFO     | [data] copytool_in thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:08,244 | INFO     | [payload] validate_post thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:08,307 | INFO     | [payload] control thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:08,380 | INFO     | [job] validate thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:08,423 | INFO     | [job] control thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:08,473 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:08,503 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:08,790 | INFO     | [data] copytool_out thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:08,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:06:37] 2025-07-25 19:06:09,849 | INFO     | [job] queue monitor thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:10,887 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 12:06:37] 2025-07-25 19:06:11,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140335601452864)>', '<ExcThread(monitor, started 140334608664320)>']
[2025-07-25 12:06:37] 2025-07-25 19:06:16,423 | INFO     | all workflow threads have been joined
[2025-07-25 12:06:37] 2025-07-25 19:06:16,423 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 12:06:37] 2025-07-25 19:06:16,424 | INFO     | traces error code: 0
[2025-07-25 12:06:37] 2025-07-25 19:06:16,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 12:06:37] 2025-07-25 19:06:36,844 | INFO     | PID=959567 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-25 12:06:37] 2025-07-25 19:06:36,844 | INFO     | .. there are 21 such processes running
[2025-07-25 12:06:37] 2025-07-25 19:06:36,845 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 12:06:37] 2025-07-25 19:06:36,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 12:06:37] 2025-07-25 19:06:36,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 12:06:37] 2025-07-25 19:06:36,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 12:06:37] 2025-07-25 19:06:36,845 | INFO     | [monitor] control thread has ended
[2025-07-25 12:06:37] 2025-07-25 19:06:36,969 [wrapper] ==== pilot stdout END ====
[2025-07-25 12:06:37] 2025-07-25 19:06:36,971 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 12:06:37] 2025-07-25 19:06:36,973 [wrapper] pilotpid: 959567
[2025-07-25 12:06:37] 2025-07-25 19:06:36,975 [wrapper] Pilot exit status: 0
[2025-07-25 12:06:37] 2025-07-25 19:06:36,985 [wrapper] pandaids: 6745058106
[2025-07-25 12:06:37] 2025-07-25 19:06:37,027 [wrapper] cleanup supervisor_pilot  959573 959568
[2025-07-25 12:06:37] 2025-07-25 19:06:37,029 [wrapper] Test setup, not cleaning
[2025-07-25 12:06:37] 2025-07-25 19:06:37,031 [wrapper] apfmon messages muted
[2025-07-25 12:06:37] 2025-07-25 19:06:37,033 [wrapper] ==== wrapper stdout END ====
[2025-07-25 12:06:37] 2025-07-25 19:06:37,035 [wrapper] ==== wrapper stderr END ====
[2025-07-25 12:06:37]  *** Error codes and diagnostics ***
[2025-07-25 12:06:37]     "exeErrorCode": 65,
[2025-07-25 12:06:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 12:06:37]     "pilotErrorCode": 1305,
[2025-07-25 12:06:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 12:06:37]  *** Listing of results directory ***
[2025-07-25 12:06:37] total 146336
[2025-07-25 12:06:37] -rw-r--r--. 1 boinc boinc    530466 Jul 25 08:55 pilot3.tar.gz
[2025-07-25 12:06:37] -rw-r--r--. 1 boinc boinc      5112 Jul 25 09:14 queuedata.json
[2025-07-25 12:06:37] -rwx------. 1 boinc boinc     36292 Jul 25 09:15 runpilot2-wrapper.sh
[2025-07-25 12:06:37] -rw-r--r--. 1 boinc boinc       100 Jul 25 12:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 12:06:37] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 12:02 run_atlas
[2025-07-25 12:06:37] -rw-r--r--. 1 boinc boinc       105 Jul 25 12:02 job.xml
[2025-07-25 12:06:37] -rw-r--r--. 2 boinc boinc 145769537 Jul 25 12:02 EVNT.45743347._001335.pool.root.1
[2025-07-25 12:06:37] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:02 start_atlas.sh
[2025-07-25 12:06:37] drwxrwx--x. 2 boinc boinc      4096 Jul 25 12:02 shared
[2025-07-25 12:06:37] -rw-r--r--. 2 boinc boinc    542888 Jul 25 12:02 input.tar.gz
[2025-07-25 12:06:37] -rw-r--r--. 1 boinc boinc      6595 Jul 25 12:02 init_data.xml
[2025-07-25 12:06:37] -rw-r--r--. 1 boinc boinc         0 Jul 25 12:02 boinc_lockfile
[2025-07-25 12:06:37] -rw-r--r--. 1 boinc boinc      2561 Jul 25 12:02 pandaJob.out
[2025-07-25 12:06:37] -rw-------. 1 boinc boinc    979993 Jul 25 12:02 agis_schedconf.cvmfs.json
[2025-07-25 12:06:37] -rw-------. 1 boinc boinc   1593052 Jul 25 12:02 agis_ddmendpoints.agis.ALL.json
[2025-07-25 12:06:37] drwx------. 4 boinc boinc      4096 Jul 25 12:02 pilot3
[2025-07-25 12:06:37] -rw-------. 1 boinc boinc       952 Jul 25 12:03 memory_monitor_summary.json
[2025-07-25 12:06:37] -rw-r--r--. 1 boinc boinc       522 Jul 25 12:03 boinc_task_state.xml
[2025-07-25 12:06:37] -rw-------. 1 boinc boinc     20964 Jul 25 12:03 log.45743349._023612.job.log.tgz.1
[2025-07-25 12:06:37] -rw-------. 1 boinc boinc        95 Jul 25 12:05 pilot_heartbeat.json
[2025-07-25 12:06:37] -rw-------. 1 boinc boinc      8392 Jul 25 12:06 heartbeat.json
[2025-07-25 12:06:37] -rw-r--r--. 1 boinc boinc      8192 Jul 25 12:06 boinc_mmap_file
[2025-07-25 12:06:37] -rw-r--r--. 1 boinc boinc        22 Jul 25 12:06 wrapper_checkpoint.txt
[2025-07-25 12:06:37] -rw-------. 1 boinc boinc       822 Jul 25 12:06 pilotlog.txt
[2025-07-25 12:06:37] -rw-------. 1 boinc boinc     77636 Jul 25 12:06 log.45743349._023612.job.log.1
[2025-07-25 12:06:37] -rw-------. 1 boinc boinc       188 Jul 25 12:06 output.list
[2025-07-25 12:06:37] -rw-r--r--. 1 boinc boinc       620 Jul 25 12:06 runtime_log
[2025-07-25 12:06:37] -rw-------. 1 boinc boinc    122880 Jul 25 12:06 result.tar.gz
[2025-07-25 12:06:37] -rw-r--r--. 1 boinc boinc      8485 Jul 25 12:06 runtime_log.err
[2025-07-25 12:06:37] -rw-------. 1 boinc boinc       644 Jul 25 12:06 CTfKDm7Faz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMwPLDm1t3tNo.diag
[2025-07-25 12:06:37] -rw-r--r--. 1 boinc boinc     21805 Jul 25 12:06 stderr.txt
[2025-07-25 12:06:37] No HITS result produced
[2025-07-25 12:06:37]  *** Contents of shared directory: ***
[2025-07-25 12:06:37] total 143028
[2025-07-25 12:06:37] -rw-r--r--. 2 boinc boinc 145769537 Jul 25 12:02 ATLAS.root_0
[2025-07-25 12:06:37] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:02 start_atlas.sh
[2025-07-25 12:06:37] -rw-r--r--. 2 boinc boinc    542888 Jul 25 12:02 input.tar.gz
[2025-07-25 12:06:37] -rw-------. 1 boinc boinc    122880 Jul 25 12:06 result.tar.gz
12:06:38 (955962): run_atlas exited; CPU time 22.387633
12:06:38 (955962): called boinc_finish(0)

</stderr_txt>
]]>

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