Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:17:12 (1298048): wrapper (7.7.26015): starting
12:17:12 (1298048): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 12:17:12] Arguments: --nthreads 12
[2025-07-25 12:17:12] Threads: 12
[2025-07-25 12:17:12] Checking for CVMFS
[2025-07-25 12:17:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 12:17:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 12:17:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 12:17:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 12:17:13] 2.11.5.0 7128 34670 117320 148751 0 270 30750744 45568001 16977 130560 0 296445373 99.776 193614711 28115 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-25 12:17:13] CVMFS is ok
[2025-07-25 12:17:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 12:17:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 12:17:13] Further information can be found at the LHC@home message board.
[2025-07-25 12:17:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 12:17:13] Checking for apptainer binary...
[2025-07-25 12:17:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 12:17:13] Running /usr/bin/apptainer --version
[2025-07-25 12:17:13] apptainer version 1.4.1-1.el9
[2025-07-25 12:17:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 12:17:14] wns0063.triumf.lcg
[2025-07-25 12:17:14] apptainer works
[2025-07-25 12:17:14] Set ATHENA_PROC_NUMBER=12
[2025-07-25 12:17:14] Set ATHENA_CORE_NUMBER=12
[2025-07-25 12:17:14] Starting ATLAS job with PandaID=6745057986
[2025-07-25 12:17:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 12:22:12]  *** The last 200 lines of the pilot log: ***
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | WARNING  | wrong length of table data, x=[1753471132.0], y=[23286.0] (must be same and length>=4)
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | INFO     | could have reported an average CPU frequency of 2562 MHz (4 samples)
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | INFO     | ..............................
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | INFO     | . Timing measurements:
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | INFO     | . get job = 0 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . initial setup = 3 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . payload setup = 17 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . stage-in = 0 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . payload execution = 50 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . stage-out = 0 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . log creation = 0 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | ..............................
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745057986/pilotlog.txt
[2025-07-25 12:22:12] 2025-07-25 19:21:37,944 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 12:22:12] - Log from pilotlog.txt -
[2025-07-25 12:22:12] 2025-07-25 19:21:37,866 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745057986/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | INFO     | extracted standard info from prmon json
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | WARNING  | wrong length of table data, x=[1753471132.0], y=[23286.0] (must be same and length>=4)
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | INFO     | could have reported an average CPU frequency of 2562 MHz (4 samples)
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | INFO     | ..............................
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | INFO     | . Timing measurements:
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | INFO     | . get job = 0 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . initial setup = 3 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . payload setup = 17 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . stage-in = 0 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . payload execution = 50 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . stage-out = 0 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . log creation = 0 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | ..............................
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745057986/pilotlog.txt
[2025-07-25 12:22:12] 2025-07-25 19:21:37,945 | WARNING  | 
[2025-07-25 12:22:12] [begin log extracts]
[2025-07-25 12:22:12] - Log from pilotlog.txt -
[2025-07-25 12:22:12] 2025-07-25 19:21:37,866 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745057986/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | INFO     | extracted standard info from prmon json
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:22:12] 2025-07-25 19:21:37,867 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | WARNING  | wrong length of table data, x=[1753471132.0], y=[23286.0] (must be same and length>=4)
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | INFO     | could have reported an average CPU frequency of 2562 MHz (4 samples)
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | INFO     | ..............................
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | INFO     | . Timing measurements:
[2025-07-25 12:22:12] 2025-07-25 19:21:37,868 | INFO     | . get job = 0 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . initial setup = 3 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . payload setup = 17 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . stage-in = 0 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . payload execution = 50 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . stage-out = 0 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | . log creation = 0 s
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | ..............................
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 12:22:12] 2025-07-25 19:21:37,869 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745057986/pilotlog.txt
[2025-07-25 12:22:12] [end log extracts]
[2025-07-25 12:22:12] 2025-07-25 19:21:37,945 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 12:22:12] 2025-07-25 19:21:37,946 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 12:22:12] 2025-07-25 19:21:38,607 | INFO     | 
[2025-07-25 12:22:12] 2025-07-25 19:21:38,607 | INFO     | job summary report
[2025-07-25 12:22:12] 2025-07-25 19:21:38,607 | INFO     | --------------------------------------------------
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | PanDA job id: 6745057986
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | task id: 45743349
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 12:19:20,272 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | pilot state: failed 
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | transexitcode: 65
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | exeerrorcode: 65
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | exitcode: 65
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | cpuconsumptiontime: 17 s
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | nevents: 0
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | neventsw: 0
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | pid: 1315186
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | pgrp: 1315186
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | corecount: 12
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | event service: False
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | sizes: {0: 2397470, 11: 2397760, 21: 2397760, 72: 2421078, 74: 2425370, 77: 2425398, 201: 2425720}
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | --------------------------------------------------
[2025-07-25 12:22:12] 2025-07-25 19:21:38,608 | INFO     | 
[2025-07-25 12:22:12] 2025-07-25 19:21:38,609 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 12:22:12] 2025-07-25 19:21:38,745 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,745 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,745 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,745 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,746 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 12:22:12] 2025-07-25 19:21:38,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,746 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 12:22:12] 2025-07-25 19:21:38,746 | INFO     | job 6745057986 has completed (purged errors)
[2025-07-25 12:22:12] 2025-07-25 19:21:38,746 | INFO     | overall cleanup function is called
[2025-07-25 12:22:12] 2025-07-25 19:21:39,753 | INFO     | --- collectZombieJob: --- 10, [1315186]
[2025-07-25 12:22:12] 2025-07-25 19:21:39,753 | INFO     | zombie collector waiting for pid 1315186
[2025-07-25 12:22:12] 2025-07-25 19:21:39,753 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 12:22:12] 2025-07-25 19:21:39,753 | INFO     | collected zombie processes
[2025-07-25 12:22:12] 2025-07-25 19:21:39,754 | INFO     | will attempt to kill all subprocesses of pid=1315186
[2025-07-25 12:22:12] 2025-07-25 19:21:40,003 | INFO     | process IDs to be killed: [1315186] (in reverse order)
[2025-07-25 12:22:12] 2025-07-25 19:21:40,169 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 12:22:12] 2025-07-25 19:21:40,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 12:22:12] 2025-07-25 19:21:40,216 | INFO     | did not find any defunct processes belonging to 1315186
[2025-07-25 12:22:12] 2025-07-25 19:21:40,262 | INFO     | did not find any defunct processes belonging to 1315186
[2025-07-25 12:22:12] 2025-07-25 19:21:40,263 | INFO     | ready for new job
[2025-07-25 12:22:12] 2025-07-25 19:21:40,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 12:22:12] 2025-07-25 19:21:40,280 | INFO     | ***************************************
[2025-07-25 12:22:12] 2025-07-25 19:21:40,281 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 12:22:12] 2025-07-25 19:21:40,281 | INFO     | ***************************************
[2025-07-25 12:22:12] 2025-07-25 19:21:40,281 | INFO     | 
[2025-07-25 12:22:12] 2025-07-25 19:21:40,283 | INFO     | architecture information:
[2025-07-25 12:22:12] 2025-07-25 19:21:40,288 | INFO     | executing command: cat /etc/os-release
[2025-07-25 12:22:12] 2025-07-25 19:21:40,322 | INFO     | cat /etc/os-release:
[2025-07-25 12:22:12] NAME="CentOS Linux"
[2025-07-25 12:22:12] VERSION="7 (Core)"
[2025-07-25 12:22:12] ID="centos"
[2025-07-25 12:22:12] ID_LIKE="rhel fedora"
[2025-07-25 12:22:12] VERSION_ID="7"
[2025-07-25 12:22:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 12:22:12] ANSI_COLOR="0;31"
[2025-07-25 12:22:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 12:22:12] HOME_URL="https://www.centos.org/"
[2025-07-25 12:22:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 12:22:12] 
[2025-07-25 12:22:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 12:22:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 12:22:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 12:22:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 12:22:12] 
[2025-07-25 12:22:12] 2025-07-25 19:21:40,322 | INFO     | ***************************************
[2025-07-25 12:22:12] 2025-07-25 19:21:40,828 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 12:22:12] 2025-07-25 19:21:40,845 | INFO     | sufficient remaining disk space (1856759660544 B)
[2025-07-25 12:22:12] 2025-07-25 19:21:40,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 12:22:12] 2025-07-25 19:21:40,846 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 12:22:12] 2025-07-25 19:21:40,846 | INFO     | update_server=False
[2025-07-25 12:22:12] 2025-07-25 19:21:40,846 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 12:22:12] 2025-07-25 19:21:41,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:22:12] 2025-07-25 19:21:41,007 | INFO     | aborting loop
[2025-07-25 12:22:12] 2025-07-25 19:21:41,009 | INFO     | all data control threads have been joined
[2025-07-25 12:22:12] 2025-07-25 19:21:41,419 | INFO     | all payload control threads have been joined
[2025-07-25 12:22:12] 2025-07-25 19:21:41,451 | INFO     | all job control threads have been joined
[2025-07-25 12:22:12] 2025-07-25 19:21:41,494 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 12:22:12] 2025-07-25 19:21:41,851 | INFO     | [job] retrieve thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:42,013 | INFO     | [job] job monitor thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:42,015 | INFO     | [data] control thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:42,173 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 12:22:12] 2025-07-25 19:21:42,186 | INFO     | [payload] validate_post thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:42,426 | INFO     | [payload] control thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:42,457 | INFO     | [job] control thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:42,478 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:42,491 | INFO     | [job] validate thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:42,533 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:42,534 | INFO     | [data] copytool_in thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:42,570 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:42,747 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:43,337 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:22:12] 2025-07-25 19:21:43,376 | INFO     | [payload] failed_post thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:44,181 | INFO     | [data] copytool_out thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:44,343 | INFO     | [job] queue monitor thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:45,504 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 12:22:12] 2025-07-25 19:21:46,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140637344372544)>', '<ExcThread(monitor, started 140636774700800)>']
[2025-07-25 12:22:12] 2025-07-25 19:21:51,831 | INFO     | all workflow threads have been joined
[2025-07-25 12:22:12] 2025-07-25 19:21:51,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 12:22:12] 2025-07-25 19:21:51,832 | INFO     | traces error code: 0
[2025-07-25 12:22:12] 2025-07-25 19:21:51,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 12:22:12] 2025-07-25 19:22:11,555 | INFO     | PID=1303457 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 12:22:12] 2025-07-25 19:22:11,556 | INFO     | .. there are 28 such processes running
[2025-07-25 12:22:12] 2025-07-25 19:22:11,556 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 12:22:12] 2025-07-25 19:22:11,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 12:22:12] 2025-07-25 19:22:11,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 12:22:12] 2025-07-25 19:22:11,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 12:22:12] 2025-07-25 19:22:11,556 | INFO     | [monitor] control thread has ended
[2025-07-25 12:22:12] 2025-07-25 19:22:12,313 [wrapper] ==== pilot stdout END ====
[2025-07-25 12:22:12] 2025-07-25 19:22:12,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 12:22:12] 2025-07-25 19:22:12,364 [wrapper] pilotpid: 1303457
[2025-07-25 12:22:12] 2025-07-25 19:22:12,398 [wrapper] Pilot exit status: 0
[2025-07-25 12:22:12] 2025-07-25 19:22:12,523 [wrapper] pandaids: 6745057986
[2025-07-25 12:22:12] 2025-07-25 19:22:12,579 [wrapper] cleanup supervisor_pilot 1303473 1303458
[2025-07-25 12:22:12] 2025-07-25 19:22:12,588 [wrapper] Test setup, not cleaning
[2025-07-25 12:22:12] 2025-07-25 19:22:12,603 [wrapper] apfmon messages muted
[2025-07-25 12:22:12] 2025-07-25 19:22:12,637 [wrapper] ==== wrapper stdout END ====
[2025-07-25 12:22:12] 2025-07-25 19:22:12,663 [wrapper] ==== wrapper stderr END ====
[2025-07-25 12:22:12]  *** Error codes and diagnostics ***
[2025-07-25 12:22:12]     "exeErrorCode": 65,
[2025-07-25 12:22:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 12:22:12]     "pilotErrorCode": 1305,
[2025-07-25 12:22:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 12:22:12]  *** Listing of results directory ***
[2025-07-25 12:22:12] total 150820
[2025-07-25 12:22:12] -rw-r--r--. 1 boinc boinc    530466 Jul 25 08:55 pilot3.tar.gz
[2025-07-25 12:22:12] -rwx------. 1 boinc boinc     36292 Jul 25 09:13 runpilot2-wrapper.sh
[2025-07-25 12:22:12] -rw-r--r--. 1 boinc boinc      5112 Jul 25 09:13 queuedata.json
[2025-07-25 12:22:12] -rw-r--r--. 1 boinc boinc       100 Jul 25 12:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 12:22:12] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 12:17 run_atlas
[2025-07-25 12:22:12] -rw-r--r--. 1 boinc boinc       105 Jul 25 12:17 job.xml
[2025-07-25 12:22:12] -rw-r--r--. 1 boinc boinc      6596 Jul 25 12:17 init_data.xml
[2025-07-25 12:22:12] -rw-r--r--. 2 boinc boinc 150356492 Jul 25 12:17 EVNT.45743347._001329.pool.root.1
[2025-07-25 12:22:12] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:17 start_atlas.sh
[2025-07-25 12:22:12] drwxrwx--x. 2 boinc boinc      4096 Jul 25 12:17 shared
[2025-07-25 12:22:12] -rw-r--r--. 2 boinc boinc    542884 Jul 25 12:17 input.tar.gz
[2025-07-25 12:22:12] -rw-r--r--. 1 boinc boinc         0 Jul 25 12:17 boinc_lockfile
[2025-07-25 12:22:12] -rw-r--r--. 1 boinc boinc      2562 Jul 25 12:17 pandaJob.out
[2025-07-25 12:22:12] -rw-------. 1 boinc boinc    979993 Jul 25 12:17 agis_schedconf.cvmfs.json
[2025-07-25 12:22:12] -rw-------. 1 boinc boinc   1593052 Jul 25 12:17 agis_ddmendpoints.agis.ALL.json
[2025-07-25 12:22:12] drwx------. 4 boinc boinc      4096 Jul 25 12:17 pilot3
[2025-07-25 12:22:12] -rw-r--r--. 1 boinc boinc       524 Jul 25 12:19 boinc_task_state.xml
[2025-07-25 12:22:12] -rw-------. 1 boinc boinc       962 Jul 25 12:19 memory_monitor_summary.json
[2025-07-25 12:22:12] -rw-------. 1 boinc boinc     21402 Jul 25 12:19 log.45743349._023525.job.log.tgz.1
[2025-07-25 12:22:12] -rw-------. 1 boinc boinc      8416 Jul 25 12:21 heartbeat.json
[2025-07-25 12:22:12] -rw-------. 1 boinc boinc        95 Jul 25 12:21 pilot_heartbeat.json
[2025-07-25 12:22:12] -rw-r--r--. 1 boinc boinc      8192 Jul 25 12:22 boinc_mmap_file
[2025-07-25 12:22:12] -rw-------. 1 boinc boinc       823 Jul 25 12:22 pilotlog.txt
[2025-07-25 12:22:12] -rw-r--r--. 1 boinc boinc        22 Jul 25 12:22 wrapper_checkpoint.txt
[2025-07-25 12:22:12] -rw-------. 1 boinc boinc     80018 Jul 25 12:22 log.45743349._023525.job.log.1
[2025-07-25 12:22:12] -rw-------. 1 boinc boinc       188 Jul 25 12:22 output.list
[2025-07-25 12:22:12] -rw-r--r--. 1 boinc boinc       620 Jul 25 12:22 runtime_log
[2025-07-25 12:22:12] -rw-------. 1 boinc boinc    122880 Jul 25 12:22 result.tar.gz
[2025-07-25 12:22:12] -rw-r--r--. 1 boinc boinc      8485 Jul 25 12:22 runtime_log.err
[2025-07-25 12:22:12] -rw-------. 1 boinc boinc       646 Jul 25 12:22 3VrMDm9Daz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4uPLDmuGs4bm.diag
[2025-07-25 12:22:12] -rw-r--r--. 1 boinc boinc     21795 Jul 25 12:22 stderr.txt
[2025-07-25 12:22:12] No HITS result produced
[2025-07-25 12:22:12]  *** Contents of shared directory: ***
[2025-07-25 12:22:12] total 147508
[2025-07-25 12:22:12] -rw-r--r--. 2 boinc boinc 150356492 Jul 25 12:17 ATLAS.root_0
[2025-07-25 12:22:12] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:17 start_atlas.sh
[2025-07-25 12:22:12] -rw-r--r--. 2 boinc boinc    542884 Jul 25 12:17 input.tar.gz
[2025-07-25 12:22:12] -rw-------. 1 boinc boinc    122880 Jul 25 12:22 result.tar.gz
12:22:13 (1298048): run_atlas exited; CPU time 25.729113
12:22:13 (1298048): called boinc_finish(0)

</stderr_txt>
]]>

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