Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:14:24 (1362413): wrapper (7.7.26015): starting
12:14:24 (1362413): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 12:14:24] Arguments: --nthreads 12
[2025-07-25 12:14:24] Threads: 12
[2025-07-25 12:14:24] Checking for CVMFS
[2025-07-25 12:14:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 12:14:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 12:14:24] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 12:14:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 12:14:24] 2.11.5.0 6746 34667 202040 148751 3 19 35583630 45568001 14398 130560 0 239716234 99.703 203940479 25030 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-25 12:14:24] CVMFS is ok
[2025-07-25 12:14:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 12:14:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 12:14:24] Further information can be found at the LHC@home message board.
[2025-07-25 12:14:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 12:14:24] Checking for apptainer binary...
[2025-07-25 12:14:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 12:14:24] Running /usr/bin/apptainer --version
[2025-07-25 12:14:25] apptainer version 1.4.1-1.el9
[2025-07-25 12:14:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 12:14:25] wns0081.triumf.lcg
[2025-07-25 12:14:25] apptainer works
[2025-07-25 12:14:25] Set ATHENA_PROC_NUMBER=12
[2025-07-25 12:14:25] Set ATHENA_CORE_NUMBER=12
[2025-07-25 12:14:25] Starting ATLAS job with PandaID=6745057975
[2025-07-25 12:14:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 12:18:12]  *** The last 200 lines of the pilot log: ***
[2025-07-25 12:18:12] 2025-07-25 19:17:39,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:18:12] 2025-07-25 19:17:39,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:18:12] 2025-07-25 19:17:39,628 | WARNING  | found no stored workdir sizes
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | WARNING  | wrong length of table data, x=[1753470910.0], y=[1867.0] (must be same and length>=4)
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | could have reported an average CPU frequency of 2458 MHz (4 samples)
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | ..............................
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . Timing measurements:
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . get job = 0 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . initial setup = 3 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . payload setup = 7 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . stage-in = 0 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . payload execution = 23 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . stage-out = 0 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,630 | INFO     | . log creation = 0 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,630 | INFO     | ..............................
[2025-07-25 12:18:12] 2025-07-25 19:17:39,630 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 12:18:12] 2025-07-25 19:17:39,630 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745057975/pilotlog.txt
[2025-07-25 12:18:12] 2025-07-25 19:17:39,644 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 12:18:12] - Log from pilotlog.txt -
[2025-07-25 12:18:12] 2025-07-25 19:17:39,628 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:18:12] 2025-07-25 19:17:39,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:18:12] 2025-07-25 19:17:39,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:18:12] 2025-07-25 19:17:39,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:18:12] 2025-07-25 19:17:39,628 | WARNING  | found no stored workdir sizes
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | WARNING  | wrong length of table data, x=[1753470910.0], y=[1867.0] (must be same and length>=4)
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | could have reported an average CPU frequency of 2458 MHz (4 samples)
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | ..............................
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . Timing measurements:
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . get job = 0 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . initial setup = 3 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . payload setup = 7 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . stage-in = 0 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . payload execution = 23 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . stage-out = 0 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,630 | INFO     | . log creation = 0 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,630 | INFO     | ..............................
[2025-07-25 12:18:12] 2025-07-25 19:17:39,630 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 12:18:12] 2025-07-25 19:17:39,630 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745057975/pilotlog.txt
[2025-07-25 12:18:12] 2025-07-25 19:17:39,645 | WARNING  | 
[2025-07-25 12:18:12] [begin log extracts]
[2025-07-25 12:18:12] - Log from pilotlog.txt -
[2025-07-25 12:18:12] 2025-07-25 19:17:39,628 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:18:12] 2025-07-25 19:17:39,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:18:12] 2025-07-25 19:17:39,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:18:12] 2025-07-25 19:17:39,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:18:12] 2025-07-25 19:17:39,628 | WARNING  | found no stored workdir sizes
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | WARNING  | wrong length of table data, x=[1753470910.0], y=[1867.0] (must be same and length>=4)
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | could have reported an average CPU frequency of 2458 MHz (4 samples)
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | ..............................
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . Timing measurements:
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . get job = 0 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . initial setup = 3 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . payload setup = 7 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . stage-in = 0 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . payload execution = 23 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,629 | INFO     | . stage-out = 0 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,630 | INFO     | . log creation = 0 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,630 | INFO     | ..............................
[2025-07-25 12:18:12] 2025-07-25 19:17:39,630 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 12:18:12] 2025-07-25 19:17:39,630 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745057975/pilotlog.txt
[2025-07-25 12:18:12] [end log extracts]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,645 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 12:18:12] 2025-07-25 19:17:39,645 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 12:18:12] 2025-07-25 19:17:39,899 | INFO     | 
[2025-07-25 12:18:12] 2025-07-25 19:17:39,899 | INFO     | job summary report
[2025-07-25 12:18:12] 2025-07-25 19:17:39,899 | INFO     | --------------------------------------------------
[2025-07-25 12:18:12] 2025-07-25 19:17:39,899 | INFO     | PanDA job id: 6745057975
[2025-07-25 12:18:12] 2025-07-25 19:17:39,899 | INFO     | task id: 45743349
[2025-07-25 12:18:12] 2025-07-25 19:17:39,899 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 12:15:23,550 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | pilot state: failed 
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | transexitcode: 65
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | exeerrorcode: 65
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | exitcode: 65
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | cpuconsumptiontime: 15 s
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | nevents: 0
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | neventsw: 0
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | pid: 1372338
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | pgrp: 1372338
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | corecount: 12
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | event service: False
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | sizes: {0: 2397299, 1: 2397498, 6: 2397760, 12: 2397788, 34: 2421074, 36: 2425366, 38: 2425522, 163: 2425688}
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | --------------------------------------------------
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | 
[2025-07-25 12:18:12] 2025-07-25 19:17:39,900 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 12:18:12] 2025-07-25 19:17:39,931 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,931 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,931 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,931 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,931 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,931 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | job 6745057975 has completed (purged errors)
[2025-07-25 12:18:12] 2025-07-25 19:17:39,932 | INFO     | overall cleanup function is called
[2025-07-25 12:18:12] 2025-07-25 19:17:40,939 | INFO     | --- collectZombieJob: --- 10, [1372338]
[2025-07-25 12:18:12] 2025-07-25 19:17:40,939 | INFO     | zombie collector waiting for pid 1372338
[2025-07-25 12:18:12] 2025-07-25 19:17:40,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 12:18:12] 2025-07-25 19:17:40,939 | INFO     | collected zombie processes
[2025-07-25 12:18:12] 2025-07-25 19:17:40,939 | INFO     | will attempt to kill all subprocesses of pid=1372338
[2025-07-25 12:18:12] 2025-07-25 19:17:41,178 | INFO     | process IDs to be killed: [1372338] (in reverse order)
[2025-07-25 12:18:12] 2025-07-25 19:17:41,247 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 12:18:12] 2025-07-25 19:17:41,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 12:18:12] 2025-07-25 19:17:41,263 | INFO     | did not find any defunct processes belonging to 1372338
[2025-07-25 12:18:12] 2025-07-25 19:17:41,288 | INFO     | did not find any defunct processes belonging to 1372338
[2025-07-25 12:18:12] 2025-07-25 19:17:41,289 | INFO     | ready for new job
[2025-07-25 12:18:12] 2025-07-25 19:17:41,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 12:18:12] 2025-07-25 19:17:41,290 | INFO     | ***************************************
[2025-07-25 12:18:12] 2025-07-25 19:17:41,290 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 12:18:12] 2025-07-25 19:17:41,290 | INFO     | ***************************************
[2025-07-25 12:18:12] 2025-07-25 19:17:41,290 | INFO     | 
[2025-07-25 12:18:12] 2025-07-25 19:17:41,292 | INFO     | architecture information:
[2025-07-25 12:18:12] 2025-07-25 19:17:41,292 | INFO     | executing command: cat /etc/os-release
[2025-07-25 12:18:12] 2025-07-25 19:17:41,307 | INFO     | cat /etc/os-release:
[2025-07-25 12:18:12] NAME="CentOS Linux"
[2025-07-25 12:18:12] VERSION="7 (Core)"
[2025-07-25 12:18:12] ID="centos"
[2025-07-25 12:18:12] ID_LIKE="rhel fedora"
[2025-07-25 12:18:12] VERSION_ID="7"
[2025-07-25 12:18:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 12:18:12] ANSI_COLOR="0;31"
[2025-07-25 12:18:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 12:18:12] HOME_URL="https://www.centos.org/"
[2025-07-25 12:18:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 12:18:12] 
[2025-07-25 12:18:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 12:18:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 12:18:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 12:18:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 12:18:12] 
[2025-07-25 12:18:12] 2025-07-25 19:17:41,308 | INFO     | ***************************************
[2025-07-25 12:18:12] 2025-07-25 19:17:41,811 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 12:18:12] 2025-07-25 19:17:41,860 | INFO     | sufficient remaining disk space (2011038744576 B)
[2025-07-25 12:18:12] 2025-07-25 19:17:41,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 12:18:12] 2025-07-25 19:17:41,861 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 12:18:12] 2025-07-25 19:17:41,861 | INFO     | update_server=False
[2025-07-25 12:18:12] 2025-07-25 19:17:41,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 12:18:12] 2025-07-25 19:17:41,861 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 12:18:12] 2025-07-25 19:17:42,091 | INFO     | all job control threads have been joined
[2025-07-25 12:18:12] 2025-07-25 19:17:42,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:18:12] 2025-07-25 19:17:42,113 | INFO     | aborting loop
[2025-07-25 12:18:12] 2025-07-25 19:17:42,487 | INFO     | all data control threads have been joined
[2025-07-25 12:18:12] 2025-07-25 19:17:42,834 | INFO     | all payload control threads have been joined
[2025-07-25 12:18:12] 2025-07-25 19:17:42,868 | INFO     | [job] retrieve thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:42,961 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:43,010 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:43,097 | INFO     | [job] control thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:43,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 12:18:12] 2025-07-25 19:17:43,120 | INFO     | [job] job monitor thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:43,208 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:43,493 | INFO     | [data] control thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:43,840 | INFO     | [payload] control thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:43,868 | INFO     | [data] copytool_out thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:44,008 | INFO     | [job] validate thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:44,034 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:44,088 | INFO     | [payload] failed_post thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:44,184 | INFO     | [payload] validate_post thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:44,319 | INFO     | [data] copytool_in thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:44,791 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:18:12] 2025-07-25 19:17:45,797 | INFO     | [job] queue monitor thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:47,122 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 12:18:12] 2025-07-25 19:17:47,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148147824448)>', '<ExcThread(monitor, started 140147316217600)>']
[2025-07-25 12:18:12] 2025-07-25 19:17:52,951 | INFO     | all workflow threads have been joined
[2025-07-25 12:18:12] 2025-07-25 19:17:52,951 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 12:18:12] 2025-07-25 19:17:52,951 | INFO     | traces error code: 0
[2025-07-25 12:18:12] 2025-07-25 19:17:52,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 12:18:12] 2025-07-25 19:18:12,636 | INFO     | PID=1365987 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 12:18:12] 2025-07-25 19:18:12,636 | INFO     | .. there are 21 such processes running
[2025-07-25 12:18:12] 2025-07-25 19:18:12,636 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 12:18:12] 2025-07-25 19:18:12,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 12:18:12] 2025-07-25 19:18:12,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 12:18:12] 2025-07-25 19:18:12,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 12:18:12] 2025-07-25 19:18:12,636 | INFO     | [monitor] control thread has ended
[2025-07-25 12:18:12] 2025-07-25 19:18:12,755 [wrapper] ==== pilot stdout END ====
[2025-07-25 12:18:12] 2025-07-25 19:18:12,758 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 12:18:12] 2025-07-25 19:18:12,759 [wrapper] pilotpid: 1365987
[2025-07-25 12:18:12] 2025-07-25 19:18:12,761 [wrapper] Pilot exit status: 0
[2025-07-25 12:18:12] 2025-07-25 19:18:12,785 [wrapper] pandaids: 6745057975
[2025-07-25 12:18:12] 2025-07-25 19:18:12,832 [wrapper] cleanup supervisor_pilot 1365993 1365988
[2025-07-25 12:18:12] 2025-07-25 19:18:12,835 [wrapper] Test setup, not cleaning
[2025-07-25 12:18:12] 2025-07-25 19:18:12,837 [wrapper] apfmon messages muted
[2025-07-25 12:18:12] 2025-07-25 19:18:12,839 [wrapper] ==== wrapper stdout END ====
[2025-07-25 12:18:12] 2025-07-25 19:18:12,841 [wrapper] ==== wrapper stderr END ====
[2025-07-25 12:18:12]  *** Error codes and diagnostics ***
[2025-07-25 12:18:12]     "exeErrorCode": 65,
[2025-07-25 12:18:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 12:18:12]     "pilotErrorCode": 1305,
[2025-07-25 12:18:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 12:18:12]  *** Listing of results directory ***
[2025-07-25 12:18:12] total 145052
[2025-07-25 12:18:12] -rw-r--r--. 1 boinc boinc    530466 Jul 25 08:55 pilot3.tar.gz
[2025-07-25 12:18:12] -rw-r--r--. 1 boinc boinc      5112 Jul 25 09:10 queuedata.json
[2025-07-25 12:18:12] -rwx------. 1 boinc boinc     36292 Jul 25 09:10 runpilot2-wrapper.sh
[2025-07-25 12:18:12] -rw-r--r--. 1 boinc boinc       100 Jul 25 12:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 12:18:12] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 12:14 run_atlas
[2025-07-25 12:18:12] -rw-r--r--. 1 boinc boinc       105 Jul 25 12:14 job.xml
[2025-07-25 12:18:12] -rw-r--r--. 1 boinc boinc      6595 Jul 25 12:14 init_data.xml
[2025-07-25 12:18:12] -rw-r--r--. 2 boinc boinc 144464332 Jul 25 12:14 EVNT.45743347._001328.pool.root.1
[2025-07-25 12:18:12] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:14 start_atlas.sh
[2025-07-25 12:18:12] drwxrwx--x. 2 boinc boinc      4096 Jul 25 12:14 shared
[2025-07-25 12:18:12] -rw-r--r--. 2 boinc boinc    542884 Jul 25 12:14 input.tar.gz
[2025-07-25 12:18:12] -rw-r--r--. 1 boinc boinc         0 Jul 25 12:14 boinc_lockfile
[2025-07-25 12:18:12] -rw-r--r--. 1 boinc boinc      2562 Jul 25 12:14 pandaJob.out
[2025-07-25 12:18:12] -rw-------. 1 boinc boinc    979993 Jul 25 12:14 agis_schedconf.cvmfs.json
[2025-07-25 12:18:12] -rw-------. 1 boinc boinc   1593052 Jul 25 12:14 agis_ddmendpoints.agis.ALL.json
[2025-07-25 12:18:12] drwx------. 4 boinc boinc      4096 Jul 25 12:14 pilot3
[2025-07-25 12:18:12] -rw-r--r--. 1 boinc boinc       522 Jul 25 12:15 boinc_task_state.xml
[2025-07-25 12:18:12] -rw-------. 1 boinc boinc       972 Jul 25 12:15 memory_monitor_summary.json
[2025-07-25 12:18:12] -rw-------. 1 boinc boinc     21203 Jul 25 12:15 log.45743349._023514.job.log.tgz.1
[2025-07-25 12:18:12] -rw-------. 1 boinc boinc        95 Jul 25 12:17 pilot_heartbeat.json
[2025-07-25 12:18:12] -rw-------. 1 boinc boinc      8417 Jul 25 12:17 heartbeat.json
[2025-07-25 12:18:12] -rw-r--r--. 1 boinc boinc      8192 Jul 25 12:18 boinc_mmap_file
[2025-07-25 12:18:12] -rw-r--r--. 1 boinc boinc        22 Jul 25 12:18 wrapper_checkpoint.txt
[2025-07-25 12:18:12] -rw-------. 1 boinc boinc       823 Jul 25 12:18 pilotlog.txt
[2025-07-25 12:18:12] -rw-------. 1 boinc boinc     76357 Jul 25 12:18 log.45743349._023514.job.log.1
[2025-07-25 12:18:12] -rw-------. 1 boinc boinc       188 Jul 25 12:18 output.list
[2025-07-25 12:18:12] -rw-r--r--. 1 boinc boinc       620 Jul 25 12:18 runtime_log
[2025-07-25 12:18:12] -rw-------. 1 boinc boinc    112640 Jul 25 12:18 result.tar.gz
[2025-07-25 12:18:12] -rw-r--r--. 1 boinc boinc      8485 Jul 25 12:18 runtime_log.err
[2025-07-25 12:18:12] -rw-------. 1 boinc boinc       647 Jul 25 12:18 7q3LDm3Aaz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbuPLDmHhnbQo.diag
[2025-07-25 12:18:12] -rw-r--r--. 1 boinc boinc     21652 Jul 25 12:18 stderr.txt
[2025-07-25 12:18:12] No HITS result produced
[2025-07-25 12:18:12]  *** Contents of shared directory: ***
[2025-07-25 12:18:12] total 141744
[2025-07-25 12:18:12] -rw-r--r--. 2 boinc boinc 144464332 Jul 25 12:14 ATLAS.root_0
[2025-07-25 12:18:12] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:14 start_atlas.sh
[2025-07-25 12:18:12] -rw-r--r--. 2 boinc boinc    542884 Jul 25 12:14 input.tar.gz
[2025-07-25 12:18:12] -rw-------. 1 boinc boinc    112640 Jul 25 12:18 result.tar.gz
12:18:14 (1362413): run_atlas exited; CPU time 20.787011
12:18:14 (1362413): called boinc_finish(0)

</stderr_txt>
]]>

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