Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:41:26 (27004): wrapper (7.7.26015): starting
14:41:26 (27004): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 14:41:26] Arguments: --nthreads 8
[2025-07-25 14:41:26] Threads: 8
[2025-07-25 14:41:26] Checking for CVMFS
[2025-07-25 14:41:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 14:41:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 14:41:27] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 14:41:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 14:41:27] 2.11.2.0 2840 109495 108836 148750 1 58 12965277 20275200 1 130560 0 28961456 99.953 10838890 11145 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 14:41:27] CVMFS is ok
[2025-07-25 14:41:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 14:41:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 14:41:27] Further information can be found at the LHC@home message board.
[2025-07-25 14:41:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 14:41:27] Checking for apptainer binary...
[2025-07-25 14:41:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 14:41:27] Running /usr/bin/apptainer --version
[2025-07-25 14:41:27] apptainer version 1.3.2-1.el7
[2025-07-25 14:41:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 14:41:29] c-204-8.aglt2.org
[2025-07-25 14:41:29] apptainer works
[2025-07-25 14:41:29] Set ATHENA_PROC_NUMBER=8
[2025-07-25 14:41:29] Set ATHENA_CORE_NUMBER=8
[2025-07-25 14:41:29] Starting ATLAS job with PandaID=6744926828
[2025-07-25 14:41:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 17:13:31]  *** The last 200 lines of the pilot log: ***
[2025-07-25 17:13:31] 2025-07-25 21:12:52,455 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 17:13:31] 2025-07-25 21:12:54,537 | INFO     | monitor loop #670: job 0:6744926828 is in state 'finished'
[2025-07-25 17:13:31] 2025-07-25 21:12:54,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 17:13:31] 2025-07-25 21:12:57,039 | INFO     | monitor loop #671: job 0:6744926828 is in state 'finished'
[2025-07-25 17:13:31] 2025-07-25 21:12:57,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 17:13:31] 2025-07-25 21:12:59,249 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-25 17:13:31] 2025-07-25 21:12:59,253 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-07-25 17:13:31] 2025-07-25 21:12:59,255 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744926828/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 17:13:31] 2025-07-25 21:12:59,256 | INFO     | extracted standard info from prmon json
[2025-07-25 17:13:31] 2025-07-25 21:12:59,256 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 17:13:31] 2025-07-25 21:12:59,256 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 17:13:31] 2025-07-25 21:12:59,257 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 17:13:31] 2025-07-25 21:12:59,257 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 17:13:31] 2025-07-25 21:12:59,261 | INFO     | fitting pss+swap vs Time
[2025-07-25 17:13:31] 2025-07-25 21:12:59,261 | INFO     | sum of square deviations: 1005179777.0
[2025-07-25 17:13:31] 2025-07-25 21:12:59,262 | INFO     | sum of deviations: -1427923013.9999995
[2025-07-25 17:13:31] 2025-07-25 21:12:59,262 | INFO     | mean x: 1753473420.5
[2025-07-25 17:13:31] 2025-07-25 21:12:59,262 | INFO     | mean y: 2519586.3513513515
[2025-07-25 17:13:31] 2025-07-25 21:12:59,263 | INFO     | -- intersect: 2493442214.184172
[2025-07-25 17:13:31] 2025-07-25 21:12:59,263 | INFO     | intersect: 2493442214.184172
[2025-07-25 17:13:31] 2025-07-25 21:12:59,263 | INFO     | chi2: 1.5540247512361238
[2025-07-25 17:13:31] 2025-07-25 21:12:59,263 | INFO     | sum of square deviations: 906703512.0
[2025-07-25 17:13:31] 2025-07-25 21:12:59,264 | INFO     | sum of deviations: -1301432804.000004
[2025-07-25 17:13:31] 2025-07-25 21:12:59,264 | INFO     | mean x: 1753473268.0
[2025-07-25 17:13:31] 2025-07-25 21:12:59,264 | INFO     | mean y: 2519782.4475524477
[2025-07-25 17:13:31] 2025-07-25 21:12:59,264 | INFO     | -- intersect: 2519359743.5927463
[2025-07-25 17:13:31] 2025-07-25 21:12:59,265 | INFO     | intersect: 2519359743.5927463
[2025-07-25 17:13:31] 2025-07-25 21:12:59,265 | INFO     | chi2: 1.5539748629157895
[2025-07-25 17:13:31] 2025-07-25 21:12:59,265 | INFO     | current chi2=1.5539748629157895 (change=0.0032102654925338365 %)
[2025-07-25 17:13:31] 2025-07-25 21:12:59,265 | INFO     | right removable region: 142
[2025-07-25 17:13:31] 2025-07-25 21:12:59,265 | INFO     | sum of square deviations: 906703512.0
[2025-07-25 17:13:31] 2025-07-25 21:12:59,266 | INFO     | sum of deviations: -22804118000.0
[2025-07-25 17:13:31] 2025-07-25 21:12:59,266 | INFO     | mean x: 1753473573.0
[2025-07-25 17:13:31] 2025-07-25 21:12:59,266 | INFO     | mean y: 2552160.062937063
[2025-07-25 17:13:31] 2025-07-25 21:12:59,266 | INFO     | -- intersect: 44103427186.312546
[2025-07-25 17:13:31] 2025-07-25 21:12:59,267 | INFO     | intersect: 44103427186.312546
[2025-07-25 17:13:31] 2025-07-25 21:12:59,267 | INFO     | chi2: 0.1479029655662382
[2025-07-25 17:13:31] 2025-07-25 21:12:59,267 | INFO     | current chi2=0.1479029655662382 (change=90.48258623624938 %)
[2025-07-25 17:13:31] 2025-07-25 21:12:59,267 | INFO     | sum of square deviations: 814878534.5
[2025-07-25 17:13:31] 2025-07-25 21:12:59,268 | INFO     | sum of deviations: -20475741015.5
[2025-07-25 17:13:31] 2025-07-25 21:12:59,268 | INFO     | mean x: 1753473725.5
[2025-07-25 17:13:31] 2025-07-25 21:12:59,268 | INFO     | mean y: 2548220.775362319
[2025-07-25 17:13:31] 2025-07-25 21:12:59,268 | INFO     | -- intersect: 44062702416.45805
[2025-07-25 17:13:31] 2025-07-25 21:12:59,268 | INFO     | intersect: 44062702416.45805
[2025-07-25 17:13:31] 2025-07-25 21:12:59,269 | INFO     | chi2: 0.1366841518555423
[2025-07-25 17:13:31] 2025-07-25 21:12:59,269 | INFO     | current chi2=0.1366841518555423 (change=7.585252714673629 %)
[2025-07-25 17:13:31] 2025-07-25 21:12:59,269 | INFO     | left removable region: 20
[2025-07-25 17:13:31] 2025-07-25 21:12:59,269 | INFO     | sum of square deviations: 563026370.5
[2025-07-25 17:13:31] 2025-07-25 21:12:59,270 | INFO     | sum of deviations: -10889672023.499998
[2025-07-25 17:13:31] 2025-07-25 21:12:59,270 | INFO     | mean x: 1753473847.5
[2025-07-25 17:13:31] 2025-07-25 21:12:59,270 | INFO     | mean y: 2532003.598360656
[2025-07-25 17:13:31] 2025-07-25 21:12:59,270 | INFO     | -- intersect: 33917027134.79871
[2025-07-25 17:13:31] 2025-07-25 21:12:59,270 | INFO     | intersect: 33917027134.79871
[2025-07-25 17:13:31] 2025-07-25 21:12:59,271 | INFO     | chi2: 0.10682115068815327
[2025-07-25 17:13:31] 2025-07-25 21:12:59,271 | INFO     | -- intersect: 33917027134.79871
[2025-07-25 17:13:31] 2025-07-25 21:12:59,271 | INFO     | current memory leak: -19.34 B/s (using 122 data points, chi2=0.11)
[2025-07-25 17:13:31] 2025-07-25 21:12:59,271 | INFO     | could have reported an average CPU frequency of 1989 MHz (8 samples)
[2025-07-25 17:13:31] 2025-07-25 21:12:59,272 | INFO     | ..............................
[2025-07-25 17:13:31] 2025-07-25 21:12:59,272 | INFO     | . Timing measurements:
[2025-07-25 17:13:31] 2025-07-25 21:12:59,272 | INFO     | . get job = 0 s
[2025-07-25 17:13:31] 2025-07-25 21:12:59,272 | INFO     | . initial setup = 2 s
[2025-07-25 17:13:31] 2025-07-25 21:12:59,272 | INFO     | . payload setup = 10 s
[2025-07-25 17:13:31] 2025-07-25 21:12:59,272 | INFO     | . stage-in = 0 s
[2025-07-25 17:13:31] 2025-07-25 21:12:59,272 | INFO     | . payload execution = 9031 s
[2025-07-25 17:13:31] 2025-07-25 21:12:59,272 | INFO     | . stage-out = 0 s
[2025-07-25 17:13:31] 2025-07-25 21:12:59,272 | INFO     | . log creation = 0 s
[2025-07-25 17:13:31] 2025-07-25 21:12:59,273 | INFO     | ..............................
[2025-07-25 17:13:31] 2025-07-25 21:12:59,458 | INFO     | 
[2025-07-25 17:13:31] 2025-07-25 21:12:59,459 | INFO     | job summary report
[2025-07-25 17:13:31] 2025-07-25 21:12:59,459 | INFO     | --------------------------------------------------
[2025-07-25 17:13:31] 2025-07-25 21:12:59,459 | INFO     | PanDA job id: 6744926828
[2025-07-25 17:13:31] 2025-07-25 21:12:59,459 | INFO     | task id: 45743349
[2025-07-25 17:13:31] 2025-07-25 21:12:59,460 | INFO     | errors: (none)
[2025-07-25 17:13:31] 2025-07-25 21:12:59,460 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 17:13:31] 2025-07-25 21:12:59,460 | INFO     | pilot state: finished 
[2025-07-25 17:13:31] 2025-07-25 21:12:59,460 | INFO     | transexitcode: 0
[2025-07-25 17:13:31] 2025-07-25 21:12:59,460 | INFO     | exeerrorcode: 0
[2025-07-25 17:13:31] 2025-07-25 21:12:59,460 | INFO     | exeerrordiag: 
[2025-07-25 17:13:31] 2025-07-25 21:12:59,461 | INFO     | exitcode: 0
[2025-07-25 17:13:31] 2025-07-25 21:12:59,461 | INFO     | exitmsg: OK
[2025-07-25 17:13:31] 2025-07-25 21:12:59,461 | INFO     | cpuconsumptiontime: 67256 s
[2025-07-25 17:13:31] 2025-07-25 21:12:59,461 | INFO     | nevents: 400
[2025-07-25 17:13:31] 2025-07-25 21:12:59,461 | INFO     | neventsw: 0
[2025-07-25 17:13:31] 2025-07-25 21:12:59,461 | INFO     | pid: 5302
[2025-07-25 17:13:31] 2025-07-25 21:12:59,461 | INFO     | pgrp: 5302
[2025-07-25 17:13:31] 2025-07-25 21:12:59,462 | INFO     | corecount: 8
[2025-07-25 17:13:31] 2025-07-25 21:12:59,462 | INFO     | event service: False
[2025-07-25 17:13:31] 2025-07-25 21:12:59,462 | INFO     | sizes: {0: 2397241, 1: 2397496, 7: 2397758, 12: 2397786, 9046: 2425992, 9048: 2434990, 9052: 2435174, 9058: 2435368}
[2025-07-25 17:13:31] 2025-07-25 21:12:59,462 | INFO     | --------------------------------------------------
[2025-07-25 17:13:31] 2025-07-25 21:12:59,462 | INFO     | 
[2025-07-25 17:13:31] 2025-07-25 21:12:59,462 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 17:13:31] 2025-07-25 21:12:59,488 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,489 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,492 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,492 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 17:13:31] 2025-07-25 21:12:59,492 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,492 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 17:13:31] 2025-07-25 21:12:59,492 | INFO     | job 6744926828 has completed (purged errors)
[2025-07-25 17:13:31] 2025-07-25 21:12:59,493 | INFO     | overall cleanup function is called
[2025-07-25 17:13:31] 2025-07-25 21:13:00,496 | INFO     | --- collectZombieJob: --- 10, [5302]
[2025-07-25 17:13:31] 2025-07-25 21:13:00,497 | INFO     | zombie collector waiting for pid 5302
[2025-07-25 17:13:31] 2025-07-25 21:13:00,497 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 17:13:31] 2025-07-25 21:13:00,497 | INFO     | collected zombie processes
[2025-07-25 17:13:31] 2025-07-25 21:13:00,497 | INFO     | will attempt to kill all subprocesses of pid=5302
[2025-07-25 17:13:31] 2025-07-25 21:13:00,592 | INFO     | process IDs to be killed: [5302] (in reverse order)
[2025-07-25 17:13:31] 2025-07-25 21:13:00,652 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 17:13:31] 2025-07-25 21:13:00,653 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 17:13:31] 2025-07-25 21:13:00,657 | INFO     | did not find any defunct processes belonging to 5302
[2025-07-25 17:13:31] 2025-07-25 21:13:00,661 | INFO     | did not find any defunct processes belonging to 5302
[2025-07-25 17:13:31] 2025-07-25 21:13:00,662 | INFO     | ready for new job
[2025-07-25 17:13:31] 2025-07-25 21:13:00,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 17:13:31] 2025-07-25 21:13:00,664 | INFO     | ***************************************
[2025-07-25 17:13:31] 2025-07-25 21:13:00,665 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 17:13:31] 2025-07-25 21:13:00,665 | INFO     | ***************************************
[2025-07-25 17:13:31] 2025-07-25 21:13:00,665 | INFO     | 
[2025-07-25 17:13:31] 2025-07-25 21:13:00,665 | INFO     | architecture information:
[2025-07-25 17:13:31] 2025-07-25 21:13:00,666 | INFO     | executing command: cat /etc/os-release
[2025-07-25 17:13:31] 2025-07-25 21:13:00,684 | INFO     | cat /etc/os-release:
[2025-07-25 17:13:31] NAME="CentOS Linux"
[2025-07-25 17:13:31] VERSION="7 (Core)"
[2025-07-25 17:13:31] ID="centos"
[2025-07-25 17:13:31] ID_LIKE="rhel fedora"
[2025-07-25 17:13:31] VERSION_ID="7"
[2025-07-25 17:13:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 17:13:31] ANSI_COLOR="0;31"
[2025-07-25 17:13:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 17:13:31] HOME_URL="https://www.centos.org/"
[2025-07-25 17:13:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 17:13:31] 
[2025-07-25 17:13:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 17:13:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 17:13:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 17:13:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 17:13:31] 
[2025-07-25 17:13:31] 2025-07-25 21:13:00,685 | INFO     | ***************************************
[2025-07-25 17:13:31] 2025-07-25 21:13:01,188 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 17:13:31] 2025-07-25 21:13:01,208 | INFO     | sufficient remaining disk space (18737004544 B)
[2025-07-25 17:13:31] 2025-07-25 21:13:01,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 17:13:31] 2025-07-25 21:13:01,209 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 17:13:31] 2025-07-25 21:13:01,209 | INFO     | update_server=False
[2025-07-25 17:13:31] 2025-07-25 21:13:01,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 17:13:31] 2025-07-25 21:13:01,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 17:13:31] 2025-07-25 21:13:01,210 | INFO     | aborting loop
[2025-07-25 17:13:31] 2025-07-25 21:13:01,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 17:13:31] 2025-07-25 21:13:01,235 | INFO     | all payload control threads have been joined
[2025-07-25 17:13:31] 2025-07-25 21:13:01,351 | INFO     | all data control threads have been joined
[2025-07-25 17:13:31] 2025-07-25 21:13:01,853 | INFO     | all job control threads have been joined
[2025-07-25 17:13:31] 2025-07-25 21:13:01,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 17:13:31] 2025-07-25 21:13:02,216 | INFO     | [job] retrieve thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:02,217 | INFO     | [job] job monitor thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:02,217 | INFO     | [job] queue monitor thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:02,241 | INFO     | [payload] control thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:02,247 | INFO     | [job] validate thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:02,289 | INFO     | [payload] validate_post thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:02,354 | INFO     | [data] control thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:02,465 | INFO     | [payload] failed_post thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:02,808 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:02,862 | INFO     | [job] control thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:02,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 17:13:31] 2025-07-25 21:13:03,425 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:03,637 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:03,710 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:03,714 | INFO     | [data] copytool_in thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:03,903 | INFO     | [data] copytool_out thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:06,939 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 17:13:31] 2025-07-25 21:13:08,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139899950958400)>', '<ExcThread(monitor, started 139899290248960)>']
[2025-07-25 17:13:31] 2025-07-25 21:13:13,987 | INFO     | all workflow threads have been joined
[2025-07-25 17:13:31] 2025-07-25 21:13:13,993 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 17:13:31] 2025-07-25 21:13:13,993 | INFO     | traces error code: 0
[2025-07-25 17:13:31] 2025-07-25 21:13:13,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 17:13:31] 2025-07-25 21:13:31,515 | INFO     | PID=30600 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 17:13:31] 2025-07-25 21:13:31,515 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 17:13:31] 2025-07-25 21:13:31,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 17:13:31] 2025-07-25 21:13:31,515 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 17:13:31] 2025-07-25 21:13:31,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 17:13:31] 2025-07-25 21:13:31,516 | INFO     | [monitor] control thread has ended
[2025-07-25 17:13:31] 2025-07-25 21:13:31,665 [wrapper] ==== pilot stdout END ====
[2025-07-25 17:13:31] 2025-07-25 21:13:31,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 17:13:31] 2025-07-25 21:13:31,674 [wrapper] pilotpid: 30600
[2025-07-25 17:13:31] 2025-07-25 21:13:31,679 [wrapper] Pilot exit status: 0
[2025-07-25 17:13:31] 2025-07-25 21:13:31,700 [wrapper] pandaids: 6744926828
[2025-07-25 17:13:31] 2025-07-25 21:13:31,746 [wrapper] cleanup supervisor_pilot  4027 30601
[2025-07-25 17:13:31] 2025-07-25 21:13:31,750 [wrapper] Test setup, not cleaning
[2025-07-25 17:13:31] 2025-07-25 21:13:31,755 [wrapper] apfmon messages muted
[2025-07-25 17:13:31] 2025-07-25 21:13:31,759 [wrapper] ==== wrapper stdout END ====
[2025-07-25 17:13:31] 2025-07-25 21:13:31,764 [wrapper] ==== wrapper stderr END ====
[2025-07-25 17:13:31]  *** Error codes and diagnostics ***
[2025-07-25 17:13:31]     "exeErrorCode": 0,
[2025-07-25 17:13:31]     "exeErrorDiag": "",
[2025-07-25 17:13:31]     "pilotErrorCode": 0,
[2025-07-25 17:13:31]     "pilotErrorDiag": "",
[2025-07-25 17:13:31]  *** Listing of results directory ***
[2025-07-25 17:13:31] total 354756
[2025-07-25 17:13:31] -rw-r--r-- 1 boincer umatlas    530466 Jul 24 15:13 pilot3.tar.gz
[2025-07-25 17:13:31] -rw-r--r-- 1 boincer umatlas      5112 Jul 24 15:39 queuedata.json
[2025-07-25 17:13:31] -rwx------ 1 boincer umatlas     36292 Jul 24 15:39 runpilot2-wrapper.sh
[2025-07-25 17:13:31] -rw-r--r-- 1 boincer umatlas       100 Jul 25 14:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 17:13:31] -rwxr-xr-x 1 boincer umatlas      7986 Jul 25 14:41 run_atlas
[2025-07-25 17:13:31] -rw-r--r-- 1 boincer umatlas       105 Jul 25 14:41 job.xml
[2025-07-25 17:13:31] -rw-r--r-- 2 boincer umatlas 146365627 Jul 25 14:41 EVNT.45743347._000417.pool.root.1
[2025-07-25 17:13:31] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 14:41 start_atlas.sh
[2025-07-25 17:13:31] drwxrwx--x 2 boincer umatlas      4096 Jul 25 14:41 shared
[2025-07-25 17:13:31] -rw-r--r-- 2 boincer umatlas    542882 Jul 25 14:41 input.tar.gz
[2025-07-25 17:13:31] -rw-r--r-- 1 boincer umatlas         0 Jul 25 14:41 boinc_lockfile
[2025-07-25 17:13:31] -rw-r--r-- 1 boincer umatlas      2559 Jul 25 14:41 pandaJob.out
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas    979993 Jul 25 14:41 agis_schedconf.cvmfs.json
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas   1593052 Jul 25 14:41 agis_ddmendpoints.agis.ALL.json
[2025-07-25 17:13:31] drwx------ 4 boincer umatlas      4096 Jul 25 14:41 pilot3
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas 210695851 Jul 25 17:12 HITS.45743349._008022.pool.root.1
[2025-07-25 17:13:31] -rw-r--r-- 1 boincer umatlas       529 Jul 25 17:12 boinc_task_state.xml
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas      1049 Jul 25 17:12 memory_monitor_summary.json
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas    350685 Jul 25 17:12 log.45743349._008022.job.log.tgz.1
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas        95 Jul 25 17:12 pilot_heartbeat.json
[2025-07-25 17:13:31] -rw-r--r-- 1 boincer umatlas      5824 Jul 25 17:12 init_data.xml
[2025-07-25 17:13:31] -rw-r--r-- 1 boincer umatlas      8192 Jul 25 17:12 boinc_mmap_file
[2025-07-25 17:13:31] -rw-r--r-- 1 boincer umatlas        27 Jul 25 17:12 wrapper_checkpoint.txt
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas      7839 Jul 25 17:12 heartbeat.json
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas       745 Jul 25 17:13 pilotlog.txt
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas    817997 Jul 25 17:13 log.45743349._008022.job.log.1
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas       357 Jul 25 17:13 output.list
[2025-07-25 17:13:31] -rw-r--r-- 1 boincer umatlas       620 Jul 25 17:13 runtime_log
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas   1187840 Jul 25 17:13 result.tar.gz
[2025-07-25 17:13:31] -rw-r--r-- 1 boincer umatlas      8655 Jul 25 17:13 runtime_log.err
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas       659 Jul 25 17:13 kwjNDmKyGz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXONLDmfizHin.diag
[2025-07-25 17:13:31] -rw-r--r-- 1 boincer umatlas     21248 Jul 25 17:13 stderr.txt
[2025-07-25 17:13:31] HITS file was successfully produced:
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas 210695851 Jul 25 17:12 shared/HITS.pool.root.1
[2025-07-25 17:13:31]  *** Contents of shared directory: ***
[2025-07-25 17:13:31] total 350408
[2025-07-25 17:13:31] -rw-r--r-- 2 boincer umatlas 146365627 Jul 25 14:41 ATLAS.root_0
[2025-07-25 17:13:31] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 14:41 start_atlas.sh
[2025-07-25 17:13:31] -rw-r--r-- 2 boincer umatlas    542882 Jul 25 14:41 input.tar.gz
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas 210695851 Jul 25 17:12 HITS.pool.root.1
[2025-07-25 17:13:31] -rw------- 1 boincer umatlas   1187840 Jul 25 17:13 result.tar.gz
17:13:33 (27004): run_atlas exited; CPU time 67200.122039
17:13:33 (27004): called boinc_finish(0)

</stderr_txt>
]]>

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