Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:35:42 (19962): wrapper (7.7.26015): starting
14:35:42 (19962): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 14:35:42] Arguments: --nthreads 8
[2025-07-25 14:35:42] Threads: 8
[2025-07-25 14:35:42] Checking for CVMFS
[2025-07-25 14:35:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 14:35:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 14:35:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 14:35:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 14:35:44] 2.12.6.0 20986 187349 1077792 148750 2 158 31455821 32935936 38474 130560 1 135190154 99.633 129229955 19083 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 14:35:44] CVMFS is ok
[2025-07-25 14:35:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 14:35:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 14:35:44] Further information can be found at the LHC@home message board.
[2025-07-25 14:35:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 14:35:44] Checking for apptainer binary...
[2025-07-25 14:35:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 14:35:44] Running /usr/bin/apptainer --version
[2025-07-25 14:35:44] apptainer version 1.4.1-1.el9
[2025-07-25 14:35:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 14:35:45] lc-10-10.aglt2.org
[2025-07-25 14:35:45] apptainer works
[2025-07-25 14:35:45] Set ATHENA_PROC_NUMBER=8
[2025-07-25 14:35:45] Set ATHENA_CORE_NUMBER=8
[2025-07-25 14:35:45] Starting ATLAS job with PandaID=6744978090
[2025-07-25 14:35:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 05:47:59]  *** The last 200 lines of the pilot log: ***
[2025-07-26 05:47:59] 2025-07-26 09:01:32,784 | INFO     | monitor loop #2606: job 0:6744978090 is in state 'finished'
[2025-07-26 05:47:59] 2025-07-26 09:01:32,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:47:59] 2025-07-26 09:01:35,289 | INFO     | monitor loop #2607: job 0:6744978090 is in state 'finished'
[2025-07-26 05:47:59] 2025-07-26 09:01:35,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:47:59] 2025-07-26 09:01:37,057 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 05:47:59] 2025-07-26 09:01:37,084 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2578.877708333332
[2025-07-26 05:47:59] 2025-07-26 09:01:37,177 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6744978090/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:47:59] 2025-07-26 09:01:37,179 | INFO     | extracted standard info from prmon json
[2025-07-26 05:47:59] 2025-07-26 09:01:37,180 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 05:47:59] 2025-07-26 09:01:37,180 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 05:47:59] 2025-07-26 09:01:37,186 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 05:47:59] 2025-07-26 09:01:37,186 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 05:47:59] 2025-07-26 09:01:37,225 | INFO     | fitting pss+swap vs Time
[2025-07-26 05:47:59] 2025-07-26 09:01:37,227 | INFO     | sum of square deviations: 189091463565.36658
[2025-07-26 05:47:59] 2025-07-26 09:01:37,276 | INFO     | sum of deviations: -230301281939.7429
[2025-07-26 05:47:59] 2025-07-26 09:01:37,276 | INFO     | mean x: 1753494618.4115567
[2025-07-26 05:47:59] 2025-07-26 09:01:37,277 | INFO     | mean y: 2086218.7900943395
[2025-07-26 05:47:59] 2025-07-26 09:01:37,277 | INFO     | -- intersect: 2137730265.7516434
[2025-07-26 05:47:59] 2025-07-26 09:01:37,277 | INFO     | intersect: 2137730265.7516434
[2025-07-26 05:47:59] 2025-07-26 09:01:37,278 | INFO     | chi2: 4.544448300175745
[2025-07-26 05:47:59] 2025-07-26 09:01:37,279 | INFO     | sum of square deviations: 185766444265.50415
[2025-07-26 05:47:59] 2025-07-26 09:01:37,294 | INFO     | sum of deviations: -169566773668.99512
[2025-07-26 05:47:59] 2025-07-26 09:01:37,294 | INFO     | mean x: 1753494465.9122183
[2025-07-26 05:47:59] 2025-07-26 09:01:37,295 | INFO     | mean y: 2088996.7568208778
[2025-07-26 05:47:59] 2025-07-26 09:01:37,295 | INFO     | -- intersect: 1602670847.837587
[2025-07-26 05:47:59] 2025-07-26 09:01:37,295 | INFO     | intersect: 1602670847.837587
[2025-07-26 05:47:59] 2025-07-26 09:01:37,296 | INFO     | chi2: 3.8651676406084237
[2025-07-26 05:47:59] 2025-07-26 09:01:37,296 | INFO     | current chi2=3.8651676406084237 (change=14.947483494114163 %)
[2025-07-26 05:47:59] 2025-07-26 09:01:37,296 | INFO     | right removable region: 842
[2025-07-26 05:47:59] 2025-07-26 09:01:37,297 | INFO     | sum of square deviations: 185766179406.1876
[2025-07-26 05:47:59] 2025-07-26 09:01:37,312 | INFO     | sum of deviations: -411261219072.6016
[2025-07-26 05:47:59] 2025-07-26 09:01:37,313 | INFO     | mean x: 1753494770.9169633
[2025-07-26 05:47:59] 2025-07-26 09:01:37,313 | INFO     | mean y: 2094510.4056939501
[2025-07-26 05:47:59] 2025-07-26 09:01:37,313 | INFO     | -- intersect: 3884094987.725746
[2025-07-26 05:47:59] 2025-07-26 09:01:37,313 | INFO     | intersect: 3884094987.725746
[2025-07-26 05:47:59] 2025-07-26 09:01:37,314 | INFO     | chi2: 2.0236070881638506
[2025-07-26 05:47:59] 2025-07-26 09:01:37,314 | INFO     | current chi2=2.0236070881638506 (change=55.47078645199698 %)
[2025-07-26 05:47:59] 2025-07-26 09:01:37,315 | INFO     | sum of square deviations: 182480156464.30206
[2025-07-26 05:47:59] 2025-07-26 09:01:37,330 | INFO     | sum of deviations: -475201993724.2468
[2025-07-26 05:47:59] 2025-07-26 09:01:37,330 | INFO     | mean x: 1753494923.421241
[2025-07-26 05:47:59] 2025-07-26 09:01:37,330 | INFO     | mean y: 2097476.5644391407
[2025-07-26 05:47:59] 2025-07-26 09:01:37,330 | INFO     | -- intersect: 4568425672.135269
[2025-07-26 05:47:59] 2025-07-26 09:01:37,331 | INFO     | intersect: 4568425672.135269
[2025-07-26 05:47:59] 2025-07-26 09:01:37,332 | INFO     | chi2: 1.6796746712775001
[2025-07-26 05:47:59] 2025-07-26 09:01:37,332 | INFO     | current chi2=1.6796746712775001 (change=16.99600771800135 %)
[2025-07-26 05:47:59] 2025-07-26 09:01:37,332 | INFO     | left removable region: 20
[2025-07-26 05:47:59] 2025-07-26 09:01:37,333 | INFO     | sum of square deviations: 172226221336.97443
[2025-07-26 05:47:59] 2025-07-26 09:01:37,347 | INFO     | sum of deviations: -364099578128.52106
[2025-07-26 05:47:59] 2025-07-26 09:01:37,347 | INFO     | mean x: 1753495045.4257908
[2025-07-26 05:47:59] 2025-07-26 09:01:37,348 | INFO     | mean y: 2098384.1472019465
[2025-07-26 05:47:59] 2025-07-26 09:01:37,348 | INFO     | -- intersect: 3709122792.7058144
[2025-07-26 05:47:59] 2025-07-26 09:01:37,348 | INFO     | intersect: 3709122792.7058144
[2025-07-26 05:47:59] 2025-07-26 09:01:37,349 | INFO     | chi2: 0.8731069843399952
[2025-07-26 05:47:59] 2025-07-26 09:01:37,349 | INFO     | -- intersect: 3709122792.7058144
[2025-07-26 05:47:59] 2025-07-26 09:01:37,349 | INFO     | current memory leak: -2.11 B/s (using 822 data points, chi2=0.87)
[2025-07-26 05:47:59] 2025-07-26 09:01:37,350 | INFO     | could have reported an average CPU frequency of 2601 MHz (32 samples)
[2025-07-26 05:47:59] 2025-07-26 09:01:37,351 | INFO     | ..............................
[2025-07-26 05:47:59] 2025-07-26 09:01:37,351 | INFO     | . Timing measurements:
[2025-07-26 05:47:59] 2025-07-26 09:01:37,351 | INFO     | . get job = 0 s
[2025-07-26 05:47:59] 2025-07-26 09:01:37,351 | INFO     | . initial setup = 6 s
[2025-07-26 05:47:59] 2025-07-26 09:01:37,351 | INFO     | . payload setup = 57 s
[2025-07-26 05:47:59] 2025-07-26 09:01:37,351 | INFO     | . stage-in = 0 s
[2025-07-26 05:47:59] 2025-07-26 09:01:37,351 | INFO     | . payload execution = 51701 s
[2025-07-26 05:47:59] 2025-07-26 09:01:37,351 | INFO     | . stage-out = 6 s
[2025-07-26 05:47:59] 2025-07-26 09:01:37,351 | INFO     | . log creation = 1 s
[2025-07-26 05:47:59] 2025-07-26 09:01:37,351 | INFO     | ..............................
[2025-07-26 05:47:59] 2025-07-26 09:01:37,868 | INFO     | 
[2025-07-26 05:47:59] 2025-07-26 09:01:37,868 | INFO     | job summary report
[2025-07-26 05:47:59] 2025-07-26 09:01:37,868 | INFO     | --------------------------------------------------
[2025-07-26 05:47:59] 2025-07-26 09:01:37,868 | INFO     | PanDA job id: 6744978090
[2025-07-26 05:47:59] 2025-07-26 09:01:37,868 | INFO     | task id: 45743349
[2025-07-26 05:47:59] 2025-07-26 09:01:37,881 | INFO     | errors: (none)
[2025-07-26 05:47:59] 2025-07-26 09:01:37,881 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 05:47:59] 2025-07-26 09:01:37,881 | INFO     | pilot state: finished 
[2025-07-26 05:47:59] 2025-07-26 09:01:37,881 | INFO     | transexitcode: 0
[2025-07-26 05:47:59] 2025-07-26 09:01:37,881 | INFO     | exeerrorcode: 0
[2025-07-26 05:47:59] 2025-07-26 09:01:37,881 | INFO     | exeerrordiag: 
[2025-07-26 05:47:59] 2025-07-26 09:01:37,881 | INFO     | exitcode: 0
[2025-07-26 05:47:59] 2025-07-26 09:01:37,881 | INFO     | exitmsg: OK
[2025-07-26 05:47:59] 2025-07-26 09:01:37,882 | INFO     | cpuconsumptiontime: 52228 s
[2025-07-26 05:47:59] 2025-07-26 09:01:37,882 | INFO     | nevents: 400
[2025-07-26 05:47:59] 2025-07-26 09:01:37,882 | INFO     | neventsw: 0
[2025-07-26 05:47:59] 2025-07-26 09:01:37,882 | INFO     | pid: 82599
[2025-07-26 05:47:59] 2025-07-26 09:01:37,882 | INFO     | pgrp: 82599
[2025-07-26 05:47:59] 2025-07-26 09:01:37,882 | INFO     | corecount: 8
[2025-07-26 05:47:59] 2025-07-26 09:01:37,882 | INFO     | event service: False
[2025-07-26 05:47:59] 2025-07-26 09:01:37,882 | INFO     | sizes: {0: 2397246, 1: 2397330, 2: 2397529, 14: 2397529, 25: 2397557, 36: 2397975, 47: 2398003, 51762: 2444961, 51770: 2453959, 51773: 2454015, 51800: 2454209}
[2025-07-26 05:47:59] 2025-07-26 09:01:37,882 | INFO     | --------------------------------------------------
[2025-07-26 05:47:59] 2025-07-26 09:01:37,882 | INFO     | 
[2025-07-26 05:47:59] 2025-07-26 09:01:37,882 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 05:47:59] 2025-07-26 09:01:37,978 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,978 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,979 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,980 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,980 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 05:47:59] 2025-07-26 09:01:37,980 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,980 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 05:47:59] 2025-07-26 09:01:37,980 | INFO     | job 6744978090 has completed (purged errors)
[2025-07-26 05:47:59] 2025-07-26 09:01:37,980 | INFO     | overall cleanup function is called
[2025-07-26 05:47:59] 2025-07-26 09:01:39,025 | INFO     | --- collectZombieJob: --- 10, [82599]
[2025-07-26 05:47:59] 2025-07-26 09:01:39,025 | INFO     | zombie collector waiting for pid 82599
[2025-07-26 05:47:59] 2025-07-26 09:01:39,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 05:47:59] 2025-07-26 09:01:39,025 | INFO     | collected zombie processes
[2025-07-26 05:47:59] 2025-07-26 09:01:39,025 | INFO     | will attempt to kill all subprocesses of pid=82599
[2025-07-26 05:47:59] 2025-07-26 09:01:40,916 | INFO     | process IDs to be killed: [82599] (in reverse order)
[2025-07-26 05:47:59] 2025-07-26 09:01:41,258 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 05:47:59] 2025-07-26 09:01:41,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 05:47:59] 2025-07-26 09:01:41,288 | INFO     | did not find any defunct processes belonging to 82599
[2025-07-26 05:47:59] 2025-07-26 09:01:41,316 | INFO     | did not find any defunct processes belonging to 82599
[2025-07-26 05:47:59] 2025-07-26 09:01:41,317 | INFO     | ready for new job
[2025-07-26 05:47:59] 2025-07-26 09:01:41,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 05:47:59] 2025-07-26 09:01:41,320 | INFO     | ***************************************
[2025-07-26 05:47:59] 2025-07-26 09:01:41,321 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 05:47:59] 2025-07-26 09:01:41,321 | INFO     | ***************************************
[2025-07-26 05:47:59] 2025-07-26 09:01:41,321 | INFO     | 
[2025-07-26 05:47:59] 2025-07-26 09:01:41,348 | INFO     | architecture information:
[2025-07-26 05:47:59] 2025-07-26 09:01:41,349 | INFO     | executing command: cat /etc/os-release
[2025-07-26 05:47:59] 2025-07-26 09:01:41,405 | INFO     | cat /etc/os-release:
[2025-07-26 05:47:59] NAME="CentOS Linux"
[2025-07-26 05:47:59] VERSION="7 (Core)"
[2025-07-26 05:47:59] ID="centos"
[2025-07-26 05:47:59] ID_LIKE="rhel fedora"
[2025-07-26 05:47:59] VERSION_ID="7"
[2025-07-26 05:47:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 05:47:59] ANSI_COLOR="0;31"
[2025-07-26 05:47:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 05:47:59] HOME_URL="https://www.centos.org/"
[2025-07-26 05:47:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 05:47:59] 
[2025-07-26 05:47:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 05:47:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 05:47:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 05:47:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 05:47:59] 
[2025-07-26 05:47:59] 2025-07-26 09:01:41,405 | INFO     | ***************************************
[2025-07-26 05:47:59] 2025-07-26 09:01:41,910 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 05:47:59] 2025-07-26 09:01:42,006 | INFO     | sufficient remaining disk space (89741328384 B)
[2025-07-26 05:47:59] 2025-07-26 09:01:42,006 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 05:47:59] 2025-07-26 09:01:42,007 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 05:47:59] 2025-07-26 09:01:42,007 | INFO     | update_server=False
[2025-07-26 05:47:59] 2025-07-26 09:01:42,007 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 05:47:59] 2025-07-26 09:01:42,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:47:59] 2025-07-26 09:01:42,007 | INFO     | aborting loop
[2025-07-26 05:47:59] 2025-07-26 09:01:42,444 | INFO     | all data control threads have been joined
[2025-07-26 05:47:59] 2025-07-26 09:01:42,816 | INFO     | all job control threads have been joined
[2025-07-26 05:47:59] 2025-07-26 09:01:42,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:47:59] 2025-07-26 09:01:43,013 | INFO     | [job] retrieve thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:43,013 | INFO     | [job] job monitor thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:43,056 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:43,264 | INFO     | [payload] validate_post thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:43,309 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:43,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 05:47:59] 2025-07-26 09:01:43,395 | INFO     | all payload control threads have been joined
[2025-07-26 05:47:59] 2025-07-26 09:01:43,450 | INFO     | [data] control thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:43,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 05:47:59] 2025-07-26 09:01:43,612 | INFO     | [job] validate thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:43,677 | INFO     | [data] copytool_in thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:43,677 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:43,685 | INFO     | [payload] failed_post thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:43,823 | INFO     | [job] control thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:43,917 | INFO     | [job] queue monitor thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:44,054 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:44,414 | INFO     | [payload] control thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:45,486 | INFO     | [data] copytool_out thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:47,328 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 05:47:59] 2025-07-26 09:01:47,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140103987574592)>', '<ExcThread(monitor, started 140103510914816)>']
[2025-07-26 05:47:59] 2025-07-26 09:01:52,572 | INFO     | all workflow threads have been joined
[2025-07-26 05:47:59] 2025-07-26 09:01:52,572 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 05:47:59] 2025-07-26 09:01:52,572 | INFO     | traces error code: 0
[2025-07-26 05:47:59] 2025-07-26 09:01:52,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 05:47:59] 2025-07-26 09:02:11,932 | INFO     | PID=40679 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 05:47:59] 2025-07-26 09:02:11,933 | INFO     | .. there are 76 such processes running
[2025-07-26 05:47:59] 2025-07-26 09:02:11,934 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 05:47:59] 2025-07-26 09:02:11,934 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 05:47:59] 2025-07-26 09:02:11,934 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 05:47:59] 2025-07-26 09:02:11,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 05:47:59] 2025-07-26 09:02:11,934 | INFO     | [monitor] control thread has ended
[2025-07-26 05:47:59] 2025-07-26 09:02:12,521 [wrapper] ==== pilot stdout END ====
[2025-07-26 05:47:59] 2025-07-26 09:02:12,542 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 05:47:59] 2025-07-26 09:02:12,554 [wrapper] pilotpid: 40679
[2025-07-26 05:47:59] 2025-07-26 09:02:12,600 [wrapper] Pilot exit status: 0
[2025-07-26 05:47:59] 2025-07-26 09:02:12,619 [wrapper] pandaids: 6744978090
[2025-07-26 05:47:59] 2025-07-26 09:02:12,765 [wrapper] cleanup supervisor_pilot 2515598 40680
[2025-07-26 05:47:59] 2025-07-26 09:02:12,771 [wrapper] Test setup, not cleaning
[2025-07-26 05:47:59] 2025-07-26 09:02:12,775 [wrapper] apfmon messages muted
[2025-07-26 05:47:59] 2025-07-26 09:02:12,777 [wrapper] ==== wrapper stdout END ====
[2025-07-26 05:47:59] 2025-07-26 09:02:12,796 [wrapper] ==== wrapper stderr END ====
[2025-07-26 05:47:59]  *** Error codes and diagnostics ***
[2025-07-26 05:47:59]     "exeErrorCode": 0,
[2025-07-26 05:47:59]     "exeErrorDiag": "",
[2025-07-26 05:47:59]     "pilotErrorCode": 0,
[2025-07-26 05:47:59]     "pilotErrorDiag": "",
[2025-07-26 05:47:59]  *** Listing of results directory ***
[2025-07-26 05:47:59] total 443972
[2025-07-26 05:47:59] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 04:34 pilot3.tar.gz
[2025-07-26 05:47:59] -rwx------. 1 boincer umatlas     36292 Jul 25 04:43 runpilot2-wrapper.sh
[2025-07-26 05:47:59] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 04:43 queuedata.json
[2025-07-26 05:47:59] -rw-r--r--. 1 boincer umatlas       100 Jul 25 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 05:47:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 14:35 run_atlas
[2025-07-26 05:47:59] -rw-r--r--. 1 boincer umatlas       105 Jul 25 14:35 job.xml
[2025-07-26 05:47:59] -rw-r--r--. 2 boincer umatlas 231435618 Jul 25 14:35 EVNT.45743347._000966.pool.root.1
[2025-07-26 05:47:59] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 14:35 start_atlas.sh
[2025-07-26 05:47:59] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 14:35 shared
[2025-07-26 05:47:59] -rw-r--r--. 2 boincer umatlas    542888 Jul 25 14:35 input.tar.gz
[2025-07-26 05:47:59] -rw-r--r--. 1 boincer umatlas         0 Jul 25 14:35 boinc_lockfile
[2025-07-26 05:47:59] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 14:35 pandaJob.out
[2025-07-26 05:47:59] -rw-------. 1 boincer umatlas    979993 Jul 25 14:36 agis_schedconf.cvmfs.json
[2025-07-26 05:47:59] drwx------. 4 boincer umatlas      4096 Jul 25 14:36 pilot3
[2025-07-26 05:47:59] -rw-------. 1 boincer umatlas 210689338 Jul 26 04:59 HITS.45743349._018593.pool.root.1
[2025-07-26 05:47:59] -rw-r--r--. 1 boincer umatlas       530 Jul 26 04:59 boinc_task_state.xml
[2025-07-26 05:47:59] -rw-------. 1 boincer umatlas      1045 Jul 26 05:00 memory_monitor_summary.json
[2025-07-26 05:47:59] -rw-------. 1 boincer umatlas   1593052 Jul 26 05:01 agis_ddmendpoints.agis.ALL.json
[2025-07-26 05:47:59] -rw-------. 1 boincer umatlas    696407 Jul 26 05:01 log.45743349._018593.job.log.tgz.1
[2025-07-26 05:47:59] -rw-------. 1 boincer umatlas      7834 Jul 26 05:01 heartbeat.json
[2025-07-26 05:47:59] -rw-------. 1 boincer umatlas        95 Jul 26 05:02 pilot_heartbeat.json
[2025-07-26 05:47:59] -rw-------. 1 boincer umatlas       821 Jul 26 05:02 pilotlog.txt
[2025-07-26 05:47:59] -rw-------. 1 boincer umatlas   3616041 Jul 26 05:02 log.45743349._018593.job.log.1
[2025-07-26 05:47:59] -rw-------. 1 boincer umatlas       357 Jul 26 05:02 output.list
[2025-07-26 05:47:59] -rw-r--r--. 1 boincer umatlas       620 Jul 26 05:02 runtime_log
[2025-07-26 05:47:59] -rw-------. 1 boincer umatlas   4331520 Jul 26 05:02 result.tar.gz
[2025-07-26 05:47:59] -rw-r--r--. 1 boincer umatlas      8661 Jul 26 05:02 runtime_log.err
[2025-07-26 05:47:59] -rw-------. 1 boincer umatlas       660 Jul 26 05:02 o6LODmNCTz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm36OLDmeShOLo.diag
[2025-07-26 05:47:59] -rw-r--r--. 1 boincer umatlas      6866 Jul 26 05:47 init_data.xml
[2025-07-26 05:47:59] -rw-r--r--. 1 boincer umatlas        27 Jul 26 05:47 wrapper_checkpoint.txt
[2025-07-26 05:47:59] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 05:47 boinc_mmap_file
[2025-07-26 05:47:59] -rw-r--r--. 1 boincer umatlas     21271 Jul 26 05:47 stderr.txt
[2025-07-26 05:48:00] HITS file was successfully produced:
[2025-07-26 05:48:00] -rw-------. 1 boincer umatlas 210689338 Jul 26 04:59 shared/HITS.pool.root.1
[2025-07-26 05:48:00]  *** Contents of shared directory: ***
[2025-07-26 05:48:00] total 436552
[2025-07-26 05:48:00] -rw-r--r--. 2 boincer umatlas 231435618 Jul 25 14:35 ATLAS.root_0
[2025-07-26 05:48:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 14:35 start_atlas.sh
[2025-07-26 05:48:00] -rw-r--r--. 2 boincer umatlas    542888 Jul 25 14:35 input.tar.gz
[2025-07-26 05:48:00] -rw-------. 1 boincer umatlas 210689338 Jul 26 04:59 HITS.pool.root.1
[2025-07-26 05:48:00] -rw-------. 1 boincer umatlas   4331520 Jul 26 05:02 result.tar.gz
05:48:01 (19962): run_atlas exited; CPU time 55959.770176
05:48:01 (19962): called boinc_finish(0)

</stderr_txt>
]]>

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