Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:28:06 (3958071): wrapper (7.7.26015): starting
14:28:06 (3958071): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 14:28:06] Arguments: --nthreads 8
[2025-07-25 14:28:06] Threads: 8
[2025-07-25 14:28:06] Checking for CVMFS
[2025-07-25 14:28:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 14:28:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 14:28:06] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 14:28:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 14:28:06] 2.13.1.0 4026694 5654 93156 148750 1 188 20613844 40960000 12145 16776704 0 73733835 99.998 211280 61098 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 14:28:06] CVMFS is ok
[2025-07-25 14:28:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 14:28:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 14:28:06] Further information can be found at the LHC@home message board.
[2025-07-25 14:28:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 14:28:06] Checking for apptainer binary...
[2025-07-25 14:28:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 14:28:06] Running /usr/bin/apptainer --version
[2025-07-25 14:28:06] apptainer version 1.4.1-1.el9
[2025-07-25 14:28:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 14:28:07] c-208-38.aglt2.org
[2025-07-25 14:28:07] apptainer works
[2025-07-25 14:28:07] Set ATHENA_PROC_NUMBER=8
[2025-07-25 14:28:07] Set ATHENA_CORE_NUMBER=8
[2025-07-25 14:28:07] Starting ATLAS job with PandaID=6744953260
[2025-07-25 14:28:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 15:23:52]  *** The last 200 lines of the pilot log: ***
[2025-07-25 15:23:52]  is_tar=False
[2025-07-25 15:23:52]  lfn=log.45743349._017025.job.log.tgz.1
[2025-07-25 15:23:52]  mtime=0
[2025-07-25 15:23:52]  protocol_id=None
[2025-07-25 15:23:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 15:23:52]  replicas=None
[2025-07-25 15:23:52]  scope=mc23_13p6TeV
[2025-07-25 15:23:52]  status=None
[2025-07-25 15:23:52]  status_code=0
[2025-07-25 15:23:52]  storage_token=
[2025-07-25 15:23:52]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6744953260/log.45743349._017025.job.log.tgz.1
[2025-07-25 15:23:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/1f/log.45743349._017025.job.log.tgz.1
[2025-07-25 15:23:52]  workdir=None
[2025-07-25 15:23:52] ]
[2025-07-25 15:23:52] 2025-07-25 19:23:10,987 | INFO     | transferring file log.45743349._017025.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6744953260/log.45743349._017025.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 15:23:52] 2025-07-25 19:23:10,987 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6744953260/log.45743349._017025.job.log.tgz.1 /tmp/boinchome/slots/3/log.45743349._017025.job
[2025-07-25 15:23:52] 2025-07-25 19:23:11,004 | INFO     | adding to output.list: log.45743349._017025.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/1f/log.45743349._017025.job.log.tg
[2025-07-25 15:23:52] 2025-07-25 19:23:11,005 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 15:23:52] 2025-07-25 19:23:11,005 | INFO     | summary of transferred files:
[2025-07-25 15:23:52] 2025-07-25 19:23:11,005 | INFO     |  -- lfn=log.45743349._017025.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 15:23:52] 2025-07-25 19:23:11,005 | INFO     | stage-out finished correctly
[2025-07-25 15:23:52] 2025-07-25 19:23:11,247 | INFO     | monitor loop #244: job 0:6744953260 is in state 'finished'
[2025-07-25 15:23:52] 2025-07-25 19:23:11,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 15:23:52] 2025-07-25 19:23:13,750 | INFO     | monitor loop #245: job 0:6744953260 is in state 'finished'
[2025-07-25 15:23:52] 2025-07-25 19:23:13,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 15:23:52] 2025-07-25 19:23:14,360 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 15:23:52] 2025-07-25 19:23:14,745 | INFO     | job 6744953260 has state=finished
[2025-07-25 15:23:52] 2025-07-25 19:23:14,745 | INFO     | preparing for final server update for job 6744953260 in state='finished'
[2025-07-25 15:23:52] 2025-07-25 19:23:14,745 | INFO     | this job has now completed (state=finished)
[2025-07-25 15:23:52] 2025-07-25 19:23:14,745 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 15:23:52] 2025-07-25 19:23:14,746 | INFO     | log transfer has been attempted: DONE
[2025-07-25 15:23:52] 2025-07-25 19:23:14,746 | INFO     | job 6744953260 has finished - writing final server update
[2025-07-25 15:23:52] 2025-07-25 19:23:14,746 | INFO     | total number of processed events: 400 (read)
[2025-07-25 15:23:52] 2025-07-25 19:23:14,746 | INFO     | executing command: lscpu
[2025-07-25 15:23:52] 2025-07-25 19:23:14,800 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 15:23:52] 2025-07-25 19:23:16,254 | INFO     | monitor loop #246: job 0:6744953260 is in state 'finished'
[2025-07-25 15:23:52] 2025-07-25 19:23:16,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 15:23:52] 2025-07-25 19:23:18,166 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-25 15:23:52] 2025-07-25 19:23:18,171 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3761.1008203124998
[2025-07-25 15:23:52] 2025-07-25 19:23:18,184 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6744953260/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 15:23:52] 2025-07-25 19:23:18,184 | INFO     | extracted standard info from prmon json
[2025-07-25 15:23:52] 2025-07-25 19:23:18,185 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 15:23:52] 2025-07-25 19:23:18,185 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 15:23:52] 2025-07-25 19:23:18,185 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 15:23:52] 2025-07-25 19:23:18,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 15:23:52] 2025-07-25 19:23:18,186 | INFO     | fitting pss+swap vs Time
[2025-07-25 15:23:52] 2025-07-25 19:23:18,186 | INFO     | sum of square deviations: 32179208.0
[2025-07-25 15:23:52] 2025-07-25 19:23:18,186 | INFO     | sum of deviations: -338602093.99999994
[2025-07-25 15:23:52] 2025-07-25 19:23:18,186 | INFO     | mean x: 1753469828.0
[2025-07-25 15:23:52] 2025-07-25 19:23:18,186 | INFO     | mean y: 2541945.659574468
[2025-07-25 15:23:52] 2025-07-25 19:23:18,186 | INFO     | -- intersect: 18453230835.411606
[2025-07-25 15:23:52] 2025-07-25 19:23:18,186 | INFO     | intersect: 18453230835.411606
[2025-07-25 15:23:52] 2025-07-25 19:23:18,186 | INFO     | chi2: 0.00045216781334228237
[2025-07-25 15:23:52] 2025-07-25 19:23:18,186 | INFO     | -- intersect: 18453230835.411606
[2025-07-25 15:23:52] 2025-07-25 19:23:18,186 | INFO     | current memory leak: -10.52 B/s (using 47 data points, chi2=0.00)
[2025-07-25 15:23:52] 2025-07-25 19:23:18,187 | INFO     | could have reported an average CPU frequency of 3753 MHz (5 samples)
[2025-07-25 15:23:52] 2025-07-25 19:23:18,187 | INFO     | ..............................
[2025-07-25 15:23:52] 2025-07-25 19:23:18,187 | INFO     | . Timing measurements:
[2025-07-25 15:23:52] 2025-07-25 19:23:18,187 | INFO     | . get job = 0 s
[2025-07-25 15:23:52] 2025-07-25 19:23:18,187 | INFO     | . initial setup = 2 s
[2025-07-25 15:23:52] 2025-07-25 19:23:18,187 | INFO     | . payload setup = 5 s
[2025-07-25 15:23:52] 2025-07-25 19:23:18,187 | INFO     | . stage-in = 0 s
[2025-07-25 15:23:52] 2025-07-25 19:23:18,187 | INFO     | . payload execution = 3269 s
[2025-07-25 15:23:52] 2025-07-25 19:23:18,187 | INFO     | . stage-out = 0 s
[2025-07-25 15:23:52] 2025-07-25 19:23:18,187 | INFO     | . log creation = 0 s
[2025-07-25 15:23:52] 2025-07-25 19:23:18,187 | INFO     | ..............................
[2025-07-25 15:23:52] 2025-07-25 19:23:18,619 | INFO     | 
[2025-07-25 15:23:52] 2025-07-25 19:23:18,619 | INFO     | job summary report
[2025-07-25 15:23:52] 2025-07-25 19:23:18,619 | INFO     | --------------------------------------------------
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | PanDA job id: 6744953260
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | task id: 45743349
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | errors: (none)
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | pilot state: finished 
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | transexitcode: 0
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | exeerrorcode: 0
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | exeerrordiag: 
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | exitcode: 0
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | exitmsg: OK
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | cpuconsumptiontime: 24186 s
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | nevents: 400
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | neventsw: 0
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | pid: 3971531
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | pgrp: 3971531
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | corecount: 8
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | event service: False
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | sizes: {0: 2397472, 4: 2397734, 11: 2397762, 3278: 2423264, 3279: 2423263, 3280: 2432317, 3284: 2432501, 3287: 2432727}
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | --------------------------------------------------
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | 
[2025-07-25 15:23:52] 2025-07-25 19:23:18,620 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-07-25 15:23:52] 2025-07-25 19:23:18,638 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,639 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 15:23:52] 2025-07-25 19:23:18,640 | INFO     | job 6744953260 has completed (purged errors)
[2025-07-25 15:23:52] 2025-07-25 19:23:18,640 | INFO     | overall cleanup function is called
[2025-07-25 15:23:52] 2025-07-25 19:23:19,647 | INFO     | --- collectZombieJob: --- 10, [3971531]
[2025-07-25 15:23:52] 2025-07-25 19:23:19,647 | INFO     | zombie collector waiting for pid 3971531
[2025-07-25 15:23:52] 2025-07-25 19:23:19,647 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 15:23:52] 2025-07-25 19:23:19,648 | INFO     | collected zombie processes
[2025-07-25 15:23:52] 2025-07-25 19:23:19,648 | INFO     | will attempt to kill all subprocesses of pid=3971531
[2025-07-25 15:23:52] 2025-07-25 19:23:19,975 | INFO     | process IDs to be killed: [3971531] (in reverse order)
[2025-07-25 15:23:52] 2025-07-25 19:23:20,085 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 15:23:52] 2025-07-25 19:23:20,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 15:23:52] 2025-07-25 19:23:20,100 | INFO     | did not find any defunct processes belonging to 3971531
[2025-07-25 15:23:52] 2025-07-25 19:23:20,113 | INFO     | did not find any defunct processes belonging to 3971531
[2025-07-25 15:23:52] 2025-07-25 19:23:20,113 | INFO     | ready for new job
[2025-07-25 15:23:52] 2025-07-25 19:23:20,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 15:23:52] 2025-07-25 19:23:20,114 | INFO     | ***************************************
[2025-07-25 15:23:52] 2025-07-25 19:23:20,114 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 15:23:52] 2025-07-25 19:23:20,114 | INFO     | ***************************************
[2025-07-25 15:23:52] 2025-07-25 19:23:20,114 | INFO     | 
[2025-07-25 15:23:52] 2025-07-25 19:23:20,119 | INFO     | architecture information:
[2025-07-25 15:23:52] 2025-07-25 19:23:20,119 | INFO     | executing command: cat /etc/os-release
[2025-07-25 15:23:52] 2025-07-25 19:23:20,132 | INFO     | cat /etc/os-release:
[2025-07-25 15:23:52] NAME="CentOS Linux"
[2025-07-25 15:23:52] VERSION="7 (Core)"
[2025-07-25 15:23:52] ID="centos"
[2025-07-25 15:23:52] ID_LIKE="rhel fedora"
[2025-07-25 15:23:52] VERSION_ID="7"
[2025-07-25 15:23:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 15:23:52] ANSI_COLOR="0;31"
[2025-07-25 15:23:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 15:23:52] HOME_URL="https://www.centos.org/"
[2025-07-25 15:23:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 15:23:52] 
[2025-07-25 15:23:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 15:23:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 15:23:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 15:23:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 15:23:52] 
[2025-07-25 15:23:52] 2025-07-25 19:23:20,132 | INFO     | ***************************************
[2025-07-25 15:23:52] 2025-07-25 19:23:20,635 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-07-25 15:23:52] 2025-07-25 19:23:20,650 | INFO     | sufficient remaining disk space (166038863872 B)
[2025-07-25 15:23:52] 2025-07-25 19:23:20,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 15:23:52] 2025-07-25 19:23:20,650 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 15:23:52] 2025-07-25 19:23:20,650 | INFO     | update_server=False
[2025-07-25 15:23:52] 2025-07-25 19:23:20,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 15:23:52] 2025-07-25 19:23:20,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 15:23:52] 2025-07-25 19:23:20,651 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 15:23:52] 2025-07-25 19:23:20,651 | INFO     | aborting loop
[2025-07-25 15:23:52] 2025-07-25 19:23:21,097 | INFO     | all payload control threads have been joined
[2025-07-25 15:23:52] 2025-07-25 19:23:21,187 | INFO     | all data control threads have been joined
[2025-07-25 15:23:52] 2025-07-25 19:23:21,571 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 15:23:52] 2025-07-25 19:23:21,653 | INFO     | [job] job monitor thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:21,656 | INFO     | [job] retrieve thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:21,661 | INFO     | [payload] validate_post thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:22,061 | INFO     | [payload] failed_post thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:22,102 | INFO     | [payload] control thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:22,192 | INFO     | [data] control thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:22,203 | INFO     | all job control threads have been joined
[2025-07-25 15:23:52] 2025-07-25 19:23:22,339 | INFO     | [data] copytool_in thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:22,413 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:22,525 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:22,630 | INFO     | [job] validate thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:22,756 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:22,927 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:23,208 | INFO     | [job] control thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:23,256 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 15:23:52] 2025-07-25 19:23:23,576 | INFO     | [data] copytool_out thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:24,262 | INFO     | [job] queue monitor thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:24,657 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 15:23:52] 2025-07-25 19:23:25,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139905304180544)>', '<ExcThread(monitor, started 139904466024192)>']
[2025-07-25 15:23:52] 2025-07-25 19:23:30,221 | INFO     | all workflow threads have been joined
[2025-07-25 15:23:52] 2025-07-25 19:23:30,221 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 15:23:52] 2025-07-25 19:23:30,222 | INFO     | traces error code: 0
[2025-07-25 15:23:52] 2025-07-25 19:23:30,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 15:23:52] 2025-07-25 19:23:52,106 | INFO     | PID=3963058 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 15:23:52] 2025-07-25 19:23:52,106 | INFO     | .. there are 15 such processes running
[2025-07-25 15:23:52] 2025-07-25 19:23:52,107 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 15:23:52] 2025-07-25 19:23:52,107 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 15:23:52] 2025-07-25 19:23:52,107 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 15:23:52] 2025-07-25 19:23:52,107 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 15:23:52] 2025-07-25 19:23:52,107 | INFO     | [monitor] control thread has ended
[2025-07-25 15:23:52] 2025-07-25 19:23:52,187 [wrapper] ==== pilot stdout END ====
[2025-07-25 15:23:52] 2025-07-25 19:23:52,189 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 15:23:52] 2025-07-25 19:23:52,191 [wrapper] pilotpid: 3963058
[2025-07-25 15:23:52] 2025-07-25 19:23:52,194 [wrapper] Pilot exit status: 0
[2025-07-25 15:23:52] 2025-07-25 19:23:52,202 [wrapper] pandaids: 6744953260
[2025-07-25 15:23:52] 2025-07-25 19:23:52,286 [wrapper] cleanup supervisor_pilot   40220 3963059
[2025-07-25 15:23:52] 2025-07-25 19:23:52,289 [wrapper] Test setup, not cleaning
[2025-07-25 15:23:52] 2025-07-25 19:23:52,291 [wrapper] apfmon messages muted
[2025-07-25 15:23:52] 2025-07-25 19:23:52,294 [wrapper] ==== wrapper stdout END ====
[2025-07-25 15:23:52] 2025-07-25 19:23:52,296 [wrapper] ==== wrapper stderr END ====
[2025-07-25 15:23:52]  *** Error codes and diagnostics ***
[2025-07-25 15:23:52]     "exeErrorCode": 0,
[2025-07-25 15:23:52]     "exeErrorDiag": "",
[2025-07-25 15:23:52]     "pilotErrorCode": 0,
[2025-07-25 15:23:52]     "pilotErrorDiag": "",
[2025-07-25 15:23:52]  *** Listing of results directory ***
[2025-07-25 15:23:52] total 351316
[2025-07-25 15:23:52] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 02:05 queuedata.json
[2025-07-25 15:23:52] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 02:05 pilot3.tar.gz
[2025-07-25 15:23:52] -rwx------. 1 boincer umatlas     36292 Jul 25 02:06 runpilot2-wrapper.sh
[2025-07-25 15:23:52] -rw-r--r--. 1 boincer umatlas       100 Jul 25 14:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 15:23:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 14:28 run_atlas
[2025-07-25 15:23:52] -rw-r--r--. 1 boincer umatlas       105 Jul 25 14:28 job.xml
[2025-07-25 15:23:52] -rw-r--r--. 2 boincer umatlas 143724810 Jul 25 14:28 EVNT.45743347._001087.pool.root.1
[2025-07-25 15:23:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 14:28 start_atlas.sh
[2025-07-25 15:23:52] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 14:28 shared
[2025-07-25 15:23:52] -rw-r--r--. 2 boincer umatlas    542894 Jul 25 14:28 input.tar.gz
[2025-07-25 15:23:52] -rw-r--r--. 1 boincer umatlas         0 Jul 25 14:28 boinc_lockfile
[2025-07-25 15:23:52] -rw-r--r--. 1 boincer umatlas      2561 Jul 25 14:28 pandaJob.out
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas    979993 Jul 25 14:28 agis_schedconf.cvmfs.json
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas   1593052 Jul 25 14:28 agis_ddmendpoints.agis.ALL.json
[2025-07-25 15:23:52] drwx------. 4 boincer umatlas      4096 Jul 25 14:28 pilot3
[2025-07-25 15:23:52] -rw-r--r--. 1 boincer umatlas      7173 Jul 25 15:19 init_data.xml
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas 210868789 Jul 25 15:22 HITS.45743349._017025.pool.root.1
[2025-07-25 15:23:52] -rw-r--r--. 1 boincer umatlas       529 Jul 25 15:22 boinc_task_state.xml
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas      1028 Jul 25 15:23 memory_monitor_summary.json
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas    295249 Jul 25 15:23 log.45743349._017025.job.log.tgz.1
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas      7764 Jul 25 15:23 heartbeat.json
[2025-07-25 15:23:52] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 15:23 boinc_mmap_file
[2025-07-25 15:23:52] -rw-r--r--. 1 boincer umatlas        27 Jul 25 15:23 wrapper_checkpoint.txt
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas       823 Jul 25 15:23 pilotlog.txt
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas        95 Jul 25 15:23 pilot_heartbeat.json
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas    341189 Jul 25 15:23 log.45743349._017025.job.log.1
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas       357 Jul 25 15:23 output.list
[2025-07-25 15:23:52] -rw-r--r--. 1 boincer umatlas       620 Jul 25 15:23 runtime_log
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas    655360 Jul 25 15:23 result.tar.gz
[2025-07-25 15:23:52] -rw-r--r--. 1 boincer umatlas      8660 Jul 25 15:23 runtime_log.err
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas       651 Jul 25 15:23 eF4NDmXkQz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmArOLDmgbAKjn.diag
[2025-07-25 15:23:52] -rw-r--r--. 1 boincer umatlas     21619 Jul 25 15:23 stderr.txt
[2025-07-25 15:23:52] HITS file was successfully produced:
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas 210868789 Jul 25 15:22 shared/HITS.pool.root.1
[2025-07-25 15:23:52]  *** Contents of shared directory: ***
[2025-07-25 15:23:52] total 347484
[2025-07-25 15:23:52] -rw-r--r--. 2 boincer umatlas 143724810 Jul 25 14:28 ATLAS.root_0
[2025-07-25 15:23:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 14:28 start_atlas.sh
[2025-07-25 15:23:52] -rw-r--r--. 2 boincer umatlas    542894 Jul 25 14:28 input.tar.gz
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas 210868789 Jul 25 15:22 HITS.pool.root.1
[2025-07-25 15:23:52] -rw-------. 1 boincer umatlas    655360 Jul 25 15:23 result.tar.gz
15:23:53 (3958071): run_atlas exited; CPU time 24264.548155
15:23:53 (3958071): called boinc_finish(0)

</stderr_txt>
]]>

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