Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:43:32 (2250514): wrapper (7.7.26015): starting
15:43:32 (2250514): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 15:43:32] Arguments: --nthreads 12
[2025-07-25 15:43:32] Threads: 12
[2025-07-25 15:43:32] Checking for CVMFS
[2025-07-25 15:43:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 15:43:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 15:43:33] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 15:43:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 15:43:33] 2.13.0.0 842134 15919 363820 148751 0 649 25622243 32935936 13074 16776704 0 37105912 99.666 69248116 33050 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 15:43:33] CVMFS is ok
[2025-07-25 15:43:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 15:43:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 15:43:33] Further information can be found at the LHC@home message board.
[2025-07-25 15:43:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 15:43:33] Checking for apptainer binary...
[2025-07-25 15:43:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 15:43:33] Running /usr/bin/apptainer --version
[2025-07-25 15:43:33] apptainer version 1.4.1-1.el9
[2025-07-25 15:43:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 15:43:33] c6-5-37-2.aglt2.org
[2025-07-25 15:43:33] apptainer works
[2025-07-25 15:43:33] Set ATHENA_PROC_NUMBER=12
[2025-07-25 15:43:33] Set ATHENA_CORE_NUMBER=12
[2025-07-25 15:43:33] Starting ATLAS job with PandaID=6745018260
[2025-07-25 15:43:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 16:59:16]  *** The last 200 lines of the pilot log: ***
[2025-07-25 16:59:16]  protocol_id=None
[2025-07-25 16:59:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 16:59:16]  replicas=None
[2025-07-25 16:59:16]  scope=mc23_13p6TeV
[2025-07-25 16:59:16]  status=None
[2025-07-25 16:59:16]  status_code=0
[2025-07-25 16:59:16]  storage_token=
[2025-07-25 16:59:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745018260/log.45743349._020755.job.log.tgz.1
[2025-07-25 16:59:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/e6/log.45743349._020755.job.log.tgz.1
[2025-07-25 16:59:16]  workdir=None
[2025-07-25 16:59:16] ]
[2025-07-25 16:59:16] 2025-07-25 20:58:35,805 | INFO     | transferring file log.45743349._020755.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745018260/log.45743349._020755.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 16:59:16] 2025-07-25 20:58:35,806 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745018260/log.45743349._020755.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._020755.job
[2025-07-25 16:59:16] 2025-07-25 20:58:35,826 | INFO     | adding to output.list: log.45743349._020755.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/e6/log.45743349._020755.job.log.tg
[2025-07-25 16:59:16] 2025-07-25 20:58:35,827 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 16:59:16] 2025-07-25 20:58:35,828 | INFO     | summary of transferred files:
[2025-07-25 16:59:16] 2025-07-25 20:58:35,828 | INFO     |  -- lfn=log.45743349._020755.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 16:59:16] 2025-07-25 20:58:35,828 | INFO     | stage-out finished correctly
[2025-07-25 16:59:16] 2025-07-25 20:58:36,033 | INFO     | PID=2254698 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-25 16:59:16] 2025-07-25 20:58:36,033 | INFO     | .. there are 15 such processes running
[2025-07-25 16:59:16] 2025-07-25 20:58:36,793 | INFO     | monitor loop #331: job 0:6745018260 is in state 'finished'
[2025-07-25 16:59:16] 2025-07-25 20:58:36,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 16:59:16] 2025-07-25 20:58:37,656 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 16:59:16] 2025-07-25 20:58:38,897 | INFO     | job 6745018260 has state=finished
[2025-07-25 16:59:16] 2025-07-25 20:58:38,898 | INFO     | preparing for final server update for job 6745018260 in state='finished'
[2025-07-25 16:59:16] 2025-07-25 20:58:38,898 | INFO     | this job has now completed (state=finished)
[2025-07-25 16:59:16] 2025-07-25 20:58:38,899 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 16:59:16] 2025-07-25 20:58:38,899 | INFO     | log transfer has been attempted: DONE
[2025-07-25 16:59:16] 2025-07-25 20:58:38,899 | INFO     | job 6745018260 has finished - writing final server update
[2025-07-25 16:59:16] 2025-07-25 20:58:38,899 | INFO     | total number of processed events: 400 (read)
[2025-07-25 16:59:16] 2025-07-25 20:58:38,900 | INFO     | executing command: lscpu
[2025-07-25 16:59:16] 2025-07-25 20:58:38,959 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 16:59:16] 2025-07-25 20:58:39,297 | INFO     | monitor loop #332: job 0:6745018260 is in state 'finished'
[2025-07-25 16:59:16] 2025-07-25 20:58:39,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 16:59:16] 2025-07-25 20:58:40,833 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-07-25 16:59:16] 2025-07-25 20:58:41,800 | INFO     | monitor loop #333: job 0:6745018260 is in state 'finished'
[2025-07-25 16:59:16] 2025-07-25 20:58:41,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 16:59:16] 2025-07-25 20:58:43,257 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-25 16:59:16] 2025-07-25 20:58:43,276 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3226.779357142857
[2025-07-25 16:59:16] 2025-07-25 20:58:43,286 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745018260/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 16:59:16] 2025-07-25 20:58:43,287 | INFO     | extracted standard info from prmon json
[2025-07-25 16:59:16] 2025-07-25 20:58:43,287 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 16:59:16] 2025-07-25 20:58:43,287 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 16:59:16] 2025-07-25 20:58:43,287 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 16:59:16] 2025-07-25 20:58:43,287 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 16:59:16] 2025-07-25 20:58:43,289 | INFO     | fitting pss+swap vs Time
[2025-07-25 16:59:16] 2025-07-25 20:58:43,289 | INFO     | sum of square deviations: 93243380.98507474
[2025-07-25 16:59:16] 2025-07-25 20:58:43,290 | INFO     | sum of deviations: -9710470142.283579
[2025-07-25 16:59:16] 2025-07-25 20:58:43,290 | INFO     | mean x: 1753474976.0149255
[2025-07-25 16:59:16] 2025-07-25 20:58:43,290 | INFO     | mean y: 2521182.2835820895
[2025-07-25 16:59:16] 2025-07-25 20:58:43,290 | INFO     | -- intersect: 182611369338.05597
[2025-07-25 16:59:16] 2025-07-25 20:58:43,290 | INFO     | intersect: 182611369338.05597
[2025-07-25 16:59:16] 2025-07-25 20:58:43,290 | INFO     | chi2: 0.22393655515860428
[2025-07-25 16:59:16] 2025-07-25 20:58:43,290 | INFO     | -- intersect: 182611369338.05597
[2025-07-25 16:59:16] 2025-07-25 20:58:43,290 | INFO     | current memory leak: -104.14 B/s (using 67 data points, chi2=0.22)
[2025-07-25 16:59:16] 2025-07-25 20:58:43,291 | INFO     | could have reported an average CPU frequency of 3064 MHz (6 samples)
[2025-07-25 16:59:16] 2025-07-25 20:58:43,291 | INFO     | ..............................
[2025-07-25 16:59:16] 2025-07-25 20:58:43,291 | INFO     | . Timing measurements:
[2025-07-25 16:59:16] 2025-07-25 20:58:43,291 | INFO     | . get job = 0 s
[2025-07-25 16:59:16] 2025-07-25 20:58:43,291 | INFO     | . initial setup = 2 s
[2025-07-25 16:59:16] 2025-07-25 20:58:43,291 | INFO     | . payload setup = 10 s
[2025-07-25 16:59:16] 2025-07-25 20:58:43,291 | INFO     | . stage-in = 0 s
[2025-07-25 16:59:16] 2025-07-25 20:58:43,291 | INFO     | . payload execution = 4460 s
[2025-07-25 16:59:16] 2025-07-25 20:58:43,291 | INFO     | . stage-out = 0 s
[2025-07-25 16:59:16] 2025-07-25 20:58:43,291 | INFO     | . log creation = 0 s
[2025-07-25 16:59:16] 2025-07-25 20:58:43,291 | INFO     | ..............................
[2025-07-25 16:59:16] 2025-07-25 20:58:43,378 | INFO     | 
[2025-07-25 16:59:16] 2025-07-25 20:58:43,378 | INFO     | job summary report
[2025-07-25 16:59:16] 2025-07-25 20:58:43,378 | INFO     | --------------------------------------------------
[2025-07-25 16:59:16] 2025-07-25 20:58:43,378 | INFO     | PanDA job id: 6745018260
[2025-07-25 16:59:16] 2025-07-25 20:58:43,378 | INFO     | task id: 45743349
[2025-07-25 16:59:16] 2025-07-25 20:58:43,378 | INFO     | errors: (none)
[2025-07-25 16:59:16] 2025-07-25 20:58:43,378 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 16:59:16] 2025-07-25 20:58:43,378 | INFO     | pilot state: finished 
[2025-07-25 16:59:16] 2025-07-25 20:58:43,378 | INFO     | transexitcode: 0
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | exeerrorcode: 0
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | exeerrordiag: 
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | exitcode: 0
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | exitmsg: OK
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | cpuconsumptiontime: 42877 s
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | nevents: 400
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | neventsw: 0
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | pid: 2261699
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | pgrp: 2261699
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | corecount: 12
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | event service: False
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | sizes: {0: 2397302, 1: 2397501, 5: 2397763, 12: 2397819, 4474: 2423864, 4475: 2432862, 4477: 2433046, 4482: 2433240}
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | --------------------------------------------------
[2025-07-25 16:59:16] 2025-07-25 20:58:43,379 | INFO     | 
[2025-07-25 16:59:16] 2025-07-25 20:58:43,380 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 16:59:16] 2025-07-25 20:58:43,399 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,399 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,399 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,400 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 16:59:16] 2025-07-25 20:58:43,401 | INFO     | job 6745018260 has completed (purged errors)
[2025-07-25 16:59:16] 2025-07-25 20:58:43,401 | INFO     | overall cleanup function is called
[2025-07-25 16:59:16] 2025-07-25 20:58:44,409 | INFO     | --- collectZombieJob: --- 10, [2261699]
[2025-07-25 16:59:16] 2025-07-25 20:58:44,409 | INFO     | zombie collector waiting for pid 2261699
[2025-07-25 16:59:16] 2025-07-25 20:58:44,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 16:59:16] 2025-07-25 20:58:44,409 | INFO     | collected zombie processes
[2025-07-25 16:59:16] 2025-07-25 20:58:44,409 | INFO     | will attempt to kill all subprocesses of pid=2261699
[2025-07-25 16:59:16] 2025-07-25 20:58:44,629 | INFO     | process IDs to be killed: [2261699] (in reverse order)
[2025-07-25 16:59:16] 2025-07-25 20:58:44,716 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 16:59:16] 2025-07-25 20:58:44,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 16:59:16] 2025-07-25 20:58:44,726 | INFO     | did not find any defunct processes belonging to 2261699
[2025-07-25 16:59:16] 2025-07-25 20:58:44,734 | INFO     | did not find any defunct processes belonging to 2261699
[2025-07-25 16:59:16] 2025-07-25 20:58:44,735 | INFO     | ready for new job
[2025-07-25 16:59:16] 2025-07-25 20:58:44,735 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 16:59:16] 2025-07-25 20:58:44,736 | INFO     | ***************************************
[2025-07-25 16:59:16] 2025-07-25 20:58:44,736 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 16:59:16] 2025-07-25 20:58:44,737 | INFO     | ***************************************
[2025-07-25 16:59:16] 2025-07-25 20:58:44,737 | INFO     | 
[2025-07-25 16:59:16] 2025-07-25 20:58:44,752 | INFO     | architecture information:
[2025-07-25 16:59:16] 2025-07-25 20:58:44,753 | INFO     | executing command: cat /etc/os-release
[2025-07-25 16:59:16] 2025-07-25 20:58:44,769 | INFO     | cat /etc/os-release:
[2025-07-25 16:59:16] NAME="CentOS Linux"
[2025-07-25 16:59:16] VERSION="7 (Core)"
[2025-07-25 16:59:16] ID="centos"
[2025-07-25 16:59:16] ID_LIKE="rhel fedora"
[2025-07-25 16:59:16] VERSION_ID="7"
[2025-07-25 16:59:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 16:59:16] ANSI_COLOR="0;31"
[2025-07-25 16:59:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 16:59:16] HOME_URL="https://www.centos.org/"
[2025-07-25 16:59:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 16:59:16] 
[2025-07-25 16:59:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 16:59:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 16:59:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 16:59:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 16:59:16] 
[2025-07-25 16:59:16] 2025-07-25 20:58:44,769 | INFO     | ***************************************
[2025-07-25 16:59:16] 2025-07-25 20:58:45,271 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 16:59:16] 2025-07-25 20:58:45,290 | INFO     | sufficient remaining disk space (73995911168 B)
[2025-07-25 16:59:16] 2025-07-25 20:58:45,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 16:59:16] 2025-07-25 20:58:45,294 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 16:59:16] 2025-07-25 20:58:45,294 | INFO     | update_server=False
[2025-07-25 16:59:16] 2025-07-25 20:58:45,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 16:59:16] 2025-07-25 20:58:45,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 16:59:16] 2025-07-25 20:58:45,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 16:59:16] 2025-07-25 20:58:45,308 | INFO     | aborting loop
[2025-07-25 16:59:16] 2025-07-25 20:58:45,342 | INFO     | all payload control threads have been joined
[2025-07-25 16:59:16] 2025-07-25 20:58:45,663 | INFO     | all job control threads have been joined
[2025-07-25 16:59:16] 2025-07-25 20:58:45,984 | INFO     | all data control threads have been joined
[2025-07-25 16:59:16] 2025-07-25 20:58:46,300 | INFO     | [job] retrieve thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:46,300 | INFO     | [job] queue monitor thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:46,313 | INFO     | [job] job monitor thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:46,327 | INFO     | [payload] failed_post thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:46,348 | INFO     | [payload] control thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:46,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 16:59:16] 2025-07-25 20:58:46,445 | INFO     | [job] validate thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:46,482 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:46,503 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:46,668 | INFO     | [job] control thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:46,953 | INFO     | [data] copytool_in thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:46,989 | INFO     | [data] control thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:47,091 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:47,215 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:47,266 | INFO     | [payload] validate_post thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:48,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 16:59:16] 2025-07-25 20:58:48,403 | INFO     | [data] copytool_out thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:52,252 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 16:59:16] 2025-07-25 20:58:52,974 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139630205982528)>', '<ExcThread(monitor, started 139629437114112)>']
[2025-07-25 16:59:16] 2025-07-25 20:58:57,999 | INFO     | all workflow threads have been joined
[2025-07-25 16:59:16] 2025-07-25 20:58:57,999 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 16:59:16] 2025-07-25 20:58:58,000 | INFO     | traces error code: 0
[2025-07-25 16:59:16] 2025-07-25 20:58:58,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 16:59:16] 2025-07-25 20:59:16,488 | INFO     | PID=2254698 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 16:59:16] 2025-07-25 20:59:16,488 | INFO     | .. there are 15 such processes running
[2025-07-25 16:59:16] 2025-07-25 20:59:16,490 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 16:59:16] 2025-07-25 20:59:16,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 16:59:16] 2025-07-25 20:59:16,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 16:59:16] 2025-07-25 20:59:16,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 16:59:16] 2025-07-25 20:59:16,490 | INFO     | [monitor] control thread has ended
[2025-07-25 16:59:16] 2025-07-25 20:59:16,647 [wrapper] ==== pilot stdout END ====
[2025-07-25 16:59:16] 2025-07-25 20:59:16,650 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 16:59:16] 2025-07-25 20:59:16,653 [wrapper] pilotpid: 2254698
[2025-07-25 16:59:16] 2025-07-25 20:59:16,657 [wrapper] Pilot exit status: 0
[2025-07-25 16:59:16] 2025-07-25 20:59:16,671 [wrapper] pandaids: 6745018260
[2025-07-25 16:59:16] 2025-07-25 20:59:16,731 [wrapper] cleanup supervisor_pilot 2502911 2254699
[2025-07-25 16:59:16] 2025-07-25 20:59:16,734 [wrapper] Test setup, not cleaning
[2025-07-25 16:59:16] 2025-07-25 20:59:16,737 [wrapper] apfmon messages muted
[2025-07-25 16:59:16] 2025-07-25 20:59:16,740 [wrapper] ==== wrapper stdout END ====
[2025-07-25 16:59:16] 2025-07-25 20:59:16,743 [wrapper] ==== wrapper stderr END ====
[2025-07-25 16:59:16]  *** Error codes and diagnostics ***
[2025-07-25 16:59:16]     "exeErrorCode": 0,
[2025-07-25 16:59:16]     "exeErrorDiag": "",
[2025-07-25 16:59:16]     "pilotErrorCode": 0,
[2025-07-25 16:59:16]     "pilotErrorDiag": "",
[2025-07-25 16:59:16]  *** Listing of results directory ***
[2025-07-25 16:59:16] total 349780
[2025-07-25 16:59:16] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 07:39 pilot3.tar.gz
[2025-07-25 16:59:16] -rwx------. 1 boincer umatlas     36292 Jul 25 07:59 runpilot2-wrapper.sh
[2025-07-25 16:59:16] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 07:59 queuedata.json
[2025-07-25 16:59:16] -rw-r--r--. 1 boincer umatlas       100 Jul 25 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 16:59:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 15:43 run_atlas
[2025-07-25 16:59:16] -rw-r--r--. 1 boincer umatlas       105 Jul 25 15:43 job.xml
[2025-07-25 16:59:16] -rw-r--r--. 2 boincer umatlas 145318320 Jul 25 15:43 EVNT.45743347._001191.pool.root.1
[2025-07-25 16:59:16] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 15:43 start_atlas.sh
[2025-07-25 16:59:16] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 15:43 shared
[2025-07-25 16:59:16] -rw-r--r--. 2 boincer umatlas    542891 Jul 25 15:43 input.tar.gz
[2025-07-25 16:59:16] -rw-r--r--. 1 boincer umatlas         0 Jul 25 15:43 boinc_lockfile
[2025-07-25 16:59:16] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 15:43 pandaJob.out
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas    979993 Jul 25 15:43 agis_schedconf.cvmfs.json
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas   1593052 Jul 25 15:43 agis_ddmendpoints.agis.ALL.json
[2025-07-25 16:59:16] drwx------. 4 boincer umatlas      4096 Jul 25 15:43 pilot3
[2025-07-25 16:59:16] -rw-r--r--. 1 boincer umatlas      6841 Jul 25 16:54 init_data.xml
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas 207356095 Jul 25 16:57 HITS.45743349._020755.pool.root.1
[2025-07-25 16:59:16] -rw-r--r--. 1 boincer umatlas       529 Jul 25 16:58 boinc_task_state.xml
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas      1038 Jul 25 16:58 memory_monitor_summary.json
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas    366526 Jul 25 16:58 log.45743349._020755.job.log.tgz.1
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas      7827 Jul 25 16:58 heartbeat.json
[2025-07-25 16:59:16] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 16:59 boinc_mmap_file
[2025-07-25 16:59:16] -rw-r--r--. 1 boincer umatlas        27 Jul 25 16:59 wrapper_checkpoint.txt
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas        95 Jul 25 16:59 pilot_heartbeat.json
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas       823 Jul 25 16:59 pilotlog.txt
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas    445402 Jul 25 16:59 log.45743349._020755.job.log.1
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas       357 Jul 25 16:59 output.list
[2025-07-25 16:59:16] -rw-r--r--. 1 boincer umatlas       620 Jul 25 16:59 runtime_log
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas    829440 Jul 25 16:59 result.tar.gz
[2025-07-25 16:59:16] -rw-r--r--. 1 boincer umatlas      8667 Jul 25 16:59 runtime_log.err
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas       653 Jul 25 16:59 eO9KDmHGWz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIVPLDme2igSm.diag
[2025-07-25 16:59:16] -rw-r--r--. 1 boincer umatlas     21928 Jul 25 16:59 stderr.txt
[2025-07-25 16:59:16] HITS file was successfully produced:
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas 207356095 Jul 25 16:57 shared/HITS.pool.root.1
[2025-07-25 16:59:16]  *** Contents of shared directory: ***
[2025-07-25 16:59:16] total 345780
[2025-07-25 16:59:16] -rw-r--r--. 2 boincer umatlas 145318320 Jul 25 15:43 ATLAS.root_0
[2025-07-25 16:59:16] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 15:43 start_atlas.sh
[2025-07-25 16:59:16] -rw-r--r--. 2 boincer umatlas    542891 Jul 25 15:43 input.tar.gz
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas 207356095 Jul 25 16:57 HITS.pool.root.1
[2025-07-25 16:59:16] -rw-------. 1 boincer umatlas    829440 Jul 25 16:59 result.tar.gz
16:59:17 (2250514): run_atlas exited; CPU time 42913.918971
16:59:17 (2250514): called boinc_finish(0)

</stderr_txt>
]]>

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