Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:22:58 (3997745): wrapper (7.7.26015): starting
11:22:58 (3997745): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 11:22:58] Arguments: --nthreads 12
[2025-07-25 11:22:58] Threads: 12
[2025-07-25 11:22:58] Checking for CVMFS
[2025-07-25 11:22:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 11:22:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 11:22:58] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 11:22:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 11:22:58] 2.11.5.0 6802 34616 197276 148750 1 61 34278107 45568001 12411 130560 0 287253304 99.761 193562482 26817 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-25 11:22:58] CVMFS is ok
[2025-07-25 11:22:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 11:22:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 11:22:58] Further information can be found at the LHC@home message board.
[2025-07-25 11:22:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 11:22:58] Checking for apptainer binary...
[2025-07-25 11:22:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 11:22:58] Running /usr/bin/apptainer --version
[2025-07-25 11:22:58] apptainer version 1.4.1-1.el9
[2025-07-25 11:22:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 11:22:59] wns0045.triumf.lcg
[2025-07-25 11:22:59] apptainer works
[2025-07-25 11:22:59] Set ATHENA_PROC_NUMBER=12
[2025-07-25 11:22:59] Set ATHENA_CORE_NUMBER=12
[2025-07-25 11:22:59] Starting ATLAS job with PandaID=6745057529
[2025-07-25 11:22:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 11:25:58]  *** The last 200 lines of the pilot log: ***
[2025-07-25 11:25:58] 2025-07-25 18:25:43,615 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 11:25:58] 2025-07-25 18:25:43,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 11:25:58] 2025-07-25 18:25:43,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 11:25:58] 2025-07-25 18:25:43,616 | WARNING  | found no stored workdir sizes
[2025-07-25 11:25:58] 2025-07-25 18:25:43,616 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | WARNING  | wrong length of table data, x=[1753467807.0], y=[1461.0] (must be same and length>=4)
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | could have reported an average CPU frequency of 2798 MHz (4 samples)
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | ..............................
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . Timing measurements:
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . get job = 0 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . initial setup = 2 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . payload setup = 3 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . stage-in = 0 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . payload execution = 13 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . stage-out = 0 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . log creation = 0 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | ..............................
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 11:25:58] 2025-07-25 18:25:43,618 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745057529/pilotlog.txt
[2025-07-25 11:25:58] 2025-07-25 18:25:43,626 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 11:25:58] - Log from pilotlog.txt -
[2025-07-25 11:25:58] 2025-07-25 18:25:43,615 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 11:25:58] 2025-07-25 18:25:43,615 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 11:25:58] 2025-07-25 18:25:43,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 11:25:58] 2025-07-25 18:25:43,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 11:25:58] 2025-07-25 18:25:43,616 | WARNING  | found no stored workdir sizes
[2025-07-25 11:25:58] 2025-07-25 18:25:43,616 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | WARNING  | wrong length of table data, x=[1753467807.0], y=[1461.0] (must be same and length>=4)
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | could have reported an average CPU frequency of 2798 MHz (4 samples)
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | ..............................
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . Timing measurements:
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . get job = 0 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . initial setup = 2 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . payload setup = 3 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . stage-in = 0 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . payload execution = 13 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . stage-out = 0 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . log creation = 0 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | ..............................
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 11:25:58] 2025-07-25 18:25:43,618 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745057529/pilotlog.txt
[2025-07-25 11:25:58] 2025-07-25 18:25:43,627 | WARNING  | 
[2025-07-25 11:25:58] [begin log extracts]
[2025-07-25 11:25:58] - Log from pilotlog.txt -
[2025-07-25 11:25:58] 2025-07-25 18:25:43,615 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 11:25:58] 2025-07-25 18:25:43,615 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 11:25:58] 2025-07-25 18:25:43,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 11:25:58] 2025-07-25 18:25:43,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 11:25:58] 2025-07-25 18:25:43,616 | WARNING  | found no stored workdir sizes
[2025-07-25 11:25:58] 2025-07-25 18:25:43,616 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | WARNING  | wrong length of table data, x=[1753467807.0], y=[1461.0] (must be same and length>=4)
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | could have reported an average CPU frequency of 2798 MHz (4 samples)
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | ..............................
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . Timing measurements:
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . get job = 0 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . initial setup = 2 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . payload setup = 3 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . stage-in = 0 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . payload execution = 13 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . stage-out = 0 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | . log creation = 0 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | ..............................
[2025-07-25 11:25:58] 2025-07-25 18:25:43,617 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 11:25:58] 2025-07-25 18:25:43,618 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745057529/pilotlog.txt
[2025-07-25 11:25:58] [end log extracts]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,627 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 11:25:58] 2025-07-25 18:25:43,628 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 11:25:58] 2025-07-25 18:25:43,687 | INFO     | 
[2025-07-25 11:25:58] 2025-07-25 18:25:43,687 | INFO     | job summary report
[2025-07-25 11:25:58] 2025-07-25 18:25:43,687 | INFO     | --------------------------------------------------
[2025-07-25 11:25:58] 2025-07-25 18:25:43,687 | INFO     | PanDA job id: 6745057529
[2025-07-25 11:25:58] 2025-07-25 18:25:43,687 | INFO     | task id: 45743349
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 11:23:34,349 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | pilot state: failed 
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | transexitcode: 65
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | exeerrorcode: 65
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | exitcode: 65
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | cpuconsumptiontime: 15 s
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | nevents: 0
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | neventsw: 0
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | pid: 4007646
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | pgrp: 4007646
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | corecount: 12
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | event service: False
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | sizes: {0: 2397470, 3: 2397732, 11: 2397760, 21: 2421014, 22: 2420990, 23: 2425310, 25: 2425466, 144: 2425632}
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | --------------------------------------------------
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | 
[2025-07-25 11:25:58] 2025-07-25 18:25:43,688 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,702 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,703 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,703 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,703 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 11:25:58] 2025-07-25 18:25:43,703 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,703 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 11:25:58] 2025-07-25 18:25:43,703 | INFO     | job 6745057529 has completed (purged errors)
[2025-07-25 11:25:58] 2025-07-25 18:25:43,703 | INFO     | overall cleanup function is called
[2025-07-25 11:25:58] 2025-07-25 18:25:44,707 | INFO     | --- collectZombieJob: --- 10, [4007646]
[2025-07-25 11:25:58] 2025-07-25 18:25:44,707 | INFO     | zombie collector waiting for pid 4007646
[2025-07-25 11:25:58] 2025-07-25 18:25:44,707 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 11:25:58] 2025-07-25 18:25:44,707 | INFO     | collected zombie processes
[2025-07-25 11:25:58] 2025-07-25 18:25:44,707 | INFO     | will attempt to kill all subprocesses of pid=4007646
[2025-07-25 11:25:58] 2025-07-25 18:25:44,845 | INFO     | process IDs to be killed: [4007646] (in reverse order)
[2025-07-25 11:25:58] 2025-07-25 18:25:44,897 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 11:25:58] 2025-07-25 18:25:44,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 11:25:58] 2025-07-25 18:25:44,903 | INFO     | did not find any defunct processes belonging to 4007646
[2025-07-25 11:25:58] 2025-07-25 18:25:44,908 | INFO     | did not find any defunct processes belonging to 4007646
[2025-07-25 11:25:58] 2025-07-25 18:25:44,909 | INFO     | ready for new job
[2025-07-25 11:25:58] 2025-07-25 18:25:44,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 11:25:58] 2025-07-25 18:25:44,910 | INFO     | ***************************************
[2025-07-25 11:25:58] 2025-07-25 18:25:44,910 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 11:25:58] 2025-07-25 18:25:44,910 | INFO     | ***************************************
[2025-07-25 11:25:58] 2025-07-25 18:25:44,910 | INFO     | 
[2025-07-25 11:25:58] 2025-07-25 18:25:44,912 | INFO     | architecture information:
[2025-07-25 11:25:58] 2025-07-25 18:25:44,912 | INFO     | executing command: cat /etc/os-release
[2025-07-25 11:25:58] 2025-07-25 18:25:44,921 | INFO     | cat /etc/os-release:
[2025-07-25 11:25:58] NAME="CentOS Linux"
[2025-07-25 11:25:58] VERSION="7 (Core)"
[2025-07-25 11:25:58] ID="centos"
[2025-07-25 11:25:58] ID_LIKE="rhel fedora"
[2025-07-25 11:25:58] VERSION_ID="7"
[2025-07-25 11:25:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 11:25:58] ANSI_COLOR="0;31"
[2025-07-25 11:25:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 11:25:58] HOME_URL="https://www.centos.org/"
[2025-07-25 11:25:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 11:25:58] 
[2025-07-25 11:25:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 11:25:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 11:25:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 11:25:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 11:25:58] 
[2025-07-25 11:25:58] 2025-07-25 18:25:44,921 | INFO     | ***************************************
[2025-07-25 11:25:58] 2025-07-25 18:25:45,423 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 11:25:58] 2025-07-25 18:25:45,433 | INFO     | sufficient remaining disk space (891752022016 B)
[2025-07-25 11:25:58] 2025-07-25 18:25:45,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 11:25:58] 2025-07-25 18:25:45,434 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 11:25:58] 2025-07-25 18:25:45,434 | INFO     | update_server=False
[2025-07-25 11:25:58] 2025-07-25 18:25:45,434 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 11:25:58] 2025-07-25 18:25:45,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 11:25:58] 2025-07-25 18:25:45,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 11:25:58] 2025-07-25 18:25:45,434 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-25 11:25:58] 2025-07-25 18:25:45,434 | INFO     | aborting loop
[2025-07-25 11:25:58] 2025-07-25 18:25:45,435 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 11:25:58] 2025-07-25 18:25:45,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 11:25:58] 2025-07-25 18:25:45,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 11:25:58] 2025-07-25 18:25:45,756 | INFO     | all payload control threads have been joined
[2025-07-25 11:25:58] 2025-07-25 18:25:46,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 11:25:58] 2025-07-25 18:25:46,253 | INFO     | all data control threads have been joined
[2025-07-25 11:25:58] 2025-07-25 18:25:46,439 | INFO     | [job] retrieve thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:46,440 | INFO     | [job] queue monitor thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:46,440 | INFO     | [job] job monitor thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:46,563 | INFO     | all job control threads have been joined
[2025-07-25 11:25:58] 2025-07-25 18:25:46,761 | INFO     | [payload] control thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:47,071 | INFO     | [job] validate thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:47,074 | INFO     | [data] copytool_in thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:47,090 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:47,199 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:47,258 | INFO     | [data] control thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:47,315 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:47,416 | INFO     | [payload] validate_post thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:47,568 | INFO     | [job] control thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:47,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 11:25:58] 2025-07-25 18:25:47,890 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:47,978 | INFO     | [payload] failed_post thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:48,035 | INFO     | [data] copytool_out thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:51,796 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 11:25:58] 2025-07-25 18:25:52,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871526442816)>', '<ExcThread(monitor, started 139870634764032)>']
[2025-07-25 11:25:58] 2025-07-25 18:25:53,474 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 11:25:58] 2025-07-25 18:25:53,474 | INFO     | [monitor] control thread has ended
[2025-07-25 11:25:58] 2025-07-25 18:25:57,947 | INFO     | all workflow threads have been joined
[2025-07-25 11:25:58] 2025-07-25 18:25:57,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 11:25:58] 2025-07-25 18:25:57,948 | INFO     | traces error code: 0
[2025-07-25 11:25:58] 2025-07-25 18:25:57,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 11:25:58] 2025-07-25 18:25:58,075 [wrapper] ==== pilot stdout END ====
[2025-07-25 11:25:58] 2025-07-25 18:25:58,077 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 11:25:58] 2025-07-25 18:25:58,079 [wrapper] pilotpid: 4001330
[2025-07-25 11:25:58] 2025-07-25 18:25:58,081 [wrapper] Pilot exit status: 0
[2025-07-25 11:25:58] 2025-07-25 18:25:58,088 [wrapper] pandaids: 6745057529
[2025-07-25 11:25:58] 2025-07-25 18:25:58,123 [wrapper] cleanup supervisor_pilot 4001336 4001331
[2025-07-25 11:25:58] 2025-07-25 18:25:58,126 [wrapper] Test setup, not cleaning
[2025-07-25 11:25:58] 2025-07-25 18:25:58,128 [wrapper] apfmon messages muted
[2025-07-25 11:25:58] 2025-07-25 18:25:58,129 [wrapper] ==== wrapper stdout END ====
[2025-07-25 11:25:58] 2025-07-25 18:25:58,131 [wrapper] ==== wrapper stderr END ====
[2025-07-25 11:25:58]  *** Error codes and diagnostics ***
[2025-07-25 11:25:58]     "exeErrorCode": 65,
[2025-07-25 11:25:58]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 11:25:58]     "pilotErrorCode": 1305,
[2025-07-25 11:25:58]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 11:25:58]  *** Listing of results directory ***
[2025-07-25 11:25:58] total 145288
[2025-07-25 11:25:58] -rwx------. 1 boinc boinc     36292 Jul 25 08:27 runpilot2-wrapper.sh
[2025-07-25 11:25:58] -rw-r--r--. 1 boinc boinc      5112 Jul 25 08:27 queuedata.json
[2025-07-25 11:25:58] -rw-r--r--. 1 boinc boinc    530466 Jul 25 08:27 pilot3.tar.gz
[2025-07-25 11:25:58] -rw-r--r--. 1 boinc boinc       100 Jul 25 11:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 11:25:58] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 11:22 run_atlas
[2025-07-25 11:25:58] -rw-r--r--. 1 boinc boinc       105 Jul 25 11:22 job.xml
[2025-07-25 11:25:58] -rw-r--r--. 1 boinc boinc      6595 Jul 25 11:22 init_data.xml
[2025-07-25 11:25:58] -rw-r--r--. 2 boinc boinc 144704422 Jul 25 11:22 EVNT.45743347._001299.pool.root.1
[2025-07-25 11:25:58] -rw-r--r--. 2 boinc boinc     15095 Jul 25 11:22 start_atlas.sh
[2025-07-25 11:25:58] drwxrwx--x. 2 boinc boinc      4096 Jul 25 11:22 shared
[2025-07-25 11:25:58] -rw-r--r--. 2 boinc boinc    542880 Jul 25 11:22 input.tar.gz
[2025-07-25 11:25:58] -rw-r--r--. 1 boinc boinc         0 Jul 25 11:22 boinc_lockfile
[2025-07-25 11:25:58] -rw-r--r--. 1 boinc boinc      2562 Jul 25 11:22 pandaJob.out
[2025-07-25 11:25:58] -rw-------. 1 boinc boinc    979993 Jul 25 11:23 agis_schedconf.cvmfs.json
[2025-07-25 11:25:58] -rw-------. 1 boinc boinc   1593052 Jul 25 11:23 agis_ddmendpoints.agis.ALL.json
[2025-07-25 11:25:58] drwx------. 4 boinc boinc      4096 Jul 25 11:23 pilot3
[2025-07-25 11:25:58] -rw-------. 1 boinc boinc       967 Jul 25 11:23 memory_monitor_summary.json
[2025-07-25 11:25:58] -rw-r--r--. 1 boinc boinc       522 Jul 25 11:23 boinc_task_state.xml
[2025-07-25 11:25:58] -rw-------. 1 boinc boinc     20210 Jul 25 11:23 log.45743349._023073.job.log.tgz.1
[2025-07-25 11:25:58] -rw-------. 1 boinc boinc        95 Jul 25 11:25 pilot_heartbeat.json
[2025-07-25 11:25:58] -rw-------. 1 boinc boinc      8408 Jul 25 11:25 heartbeat.json
[2025-07-25 11:25:58] -rw-r--r--. 1 boinc boinc      8192 Jul 25 11:25 boinc_mmap_file
[2025-07-25 11:25:58] -rw-r--r--. 1 boinc boinc        22 Jul 25 11:25 wrapper_checkpoint.txt
[2025-07-25 11:25:58] -rw-------. 1 boinc boinc      4478 Jul 25 11:25 pilotlog.txt
[2025-07-25 11:25:58] -rw-------. 1 boinc boinc     74014 Jul 25 11:25 log.45743349._023073.job.log.1
[2025-07-25 11:25:58] -rw-------. 1 boinc boinc       188 Jul 25 11:25 output.list
[2025-07-25 11:25:58] -rw-r--r--. 1 boinc boinc       620 Jul 25 11:25 runtime_log
[2025-07-25 11:25:58] -rw-------. 1 boinc boinc    112640 Jul 25 11:25 result.tar.gz
[2025-07-25 11:25:58] -rw-------. 1 boinc boinc       646 Jul 25 11:25 TyxMDmHVZz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmG9yKDmzKVuwm.diag
[2025-07-25 11:25:58] -rw-r--r--. 1 boinc boinc      8485 Jul 25 11:25 runtime_log.err
[2025-07-25 11:25:58] -rw-r--r--. 1 boinc boinc     21575 Jul 25 11:25 stderr.txt
[2025-07-25 11:25:58] No HITS result produced
[2025-07-25 11:25:58]  *** Contents of shared directory: ***
[2025-07-25 11:25:58] total 141980
[2025-07-25 11:25:58] -rw-r--r--. 2 boinc boinc 144704422 Jul 25 11:22 ATLAS.root_0
[2025-07-25 11:25:58] -rw-r--r--. 2 boinc boinc     15095 Jul 25 11:22 start_atlas.sh
[2025-07-25 11:25:58] -rw-r--r--. 2 boinc boinc    542880 Jul 25 11:22 input.tar.gz
[2025-07-25 11:25:58] -rw-------. 1 boinc boinc    112640 Jul 25 11:25 result.tar.gz
11:25:59 (3997745): run_atlas exited; CPU time 18.185723
11:25:59 (3997745): called boinc_finish(0)

</stderr_txt>
]]>

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