Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:52:00 (8096): wrapper (7.7.26015): starting
05:52:00 (8096): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 05:52:00] Arguments: --nthreads 8
[2025-07-26 05:52:00] Threads: 8
[2025-07-26 05:52:00] Checking for CVMFS
[2025-07-26 05:52:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 05:52:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 05:52:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 05:52:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 05:52:01] 2.11.2.0 3966 107560 137224 148763 3 109 20702948 25165824 4353 130560 0 76945947 99.858 48233439 3353 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-26 05:52:01] CVMFS is ok
[2025-07-26 05:52:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 05:52:01] Checking for apptainer binary...
[2025-07-26 05:52:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 05:52:01] Running /usr/bin/apptainer --version
[2025-07-26 05:52:01] apptainer version 1.3.2-1.el7
[2025-07-26 05:52:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 05:52:03] cg-vwn439.simple-grid.lan
[2025-07-26 05:52:03] apptainer works
[2025-07-26 05:52:03] Set ATHENA_PROC_NUMBER=8
[2025-07-26 05:52:03] Set ATHENA_CORE_NUMBER=8
[2025-07-26 05:52:03] Starting ATLAS job with PandaID=6745018335
[2025-07-26 05:52:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 16:46:46]  *** The last 200 lines of the pilot log: ***
[2025-07-26 16:46:46] 2025-07-26 08:11:31,231 | INFO     | fitting pss+swap vs Time
[2025-07-26 16:46:46] 2025-07-26 08:11:31,232 | INFO     | sum of square deviations: 5021496942.0
[2025-07-26 16:46:46] 2025-07-26 08:11:31,234 | INFO     | sum of deviations: 6660725358.999989
[2025-07-26 16:46:46] 2025-07-26 08:11:31,234 | INFO     | mean x: 1753509682.0
[2025-07-26 16:46:46] 2025-07-26 08:11:31,234 | INFO     | mean y: 2483330.3201581025
[2025-07-26 16:46:46] 2025-07-26 08:11:31,234 | INFO     | -- intersect: -2323445877.852883
[2025-07-26 16:46:46] 2025-07-26 08:11:31,234 | INFO     | intersect: -2323445877.852883
[2025-07-26 16:46:46] 2025-07-26 08:11:31,235 | INFO     | chi2: 2.343944175781693
[2025-07-26 16:46:46] 2025-07-26 08:11:31,235 | INFO     | sum of square deviations: 4729621702.0
[2025-07-26 16:46:46] 2025-07-26 08:11:31,237 | INFO     | sum of deviations: 23021404758.000004
[2025-07-26 16:46:46] 2025-07-26 08:11:31,237 | INFO     | mean x: 1753509529.5
[2025-07-26 16:46:46] 2025-07-26 08:11:31,238 | INFO     | mean y: 2491738.3467741935
[2025-07-26 16:46:46] 2025-07-26 08:11:31,238 | INFO     | -- intersect: -8532705190.523721
[2025-07-26 16:46:46] 2025-07-26 08:11:31,238 | INFO     | intersect: -8532705190.523721
[2025-07-26 16:46:46] 2025-07-26 08:11:31,238 | INFO     | chi2: 1.5752291604640314
[2025-07-26 16:46:46] 2025-07-26 08:11:31,238 | INFO     | current chi2=1.5752291604640314 (change=32.79579024365199 %)
[2025-07-26 16:46:46] 2025-07-26 08:11:31,239 | INFO     | sum of square deviations: 4449281562.0
[2025-07-26 16:46:46] 2025-07-26 08:11:31,241 | INFO     | sum of deviations: 22347485236.999992
[2025-07-26 16:46:46] 2025-07-26 08:11:31,241 | INFO     | mean x: 1753509377.0
[2025-07-26 16:46:46] 2025-07-26 08:11:31,241 | INFO     | mean y: 2491371.699588477
[2025-07-26 16:46:46] 2025-07-26 08:11:31,241 | INFO     | -- intersect: -8804891206.676455
[2025-07-26 16:46:46] 2025-07-26 08:11:31,241 | INFO     | intersect: -8804891206.676455
[2025-07-26 16:46:46] 2025-07-26 08:11:31,241 | INFO     | chi2: 1.5758851240847191
[2025-07-26 16:46:46] 2025-07-26 08:11:31,242 | INFO     | current chi2=1.5758851240847191 (change=-0.04164242493419349 %)
[2025-07-26 16:46:46] 2025-07-26 08:11:31,242 | INFO     | right removable region: 242
[2025-07-26 16:46:46] 2025-07-26 08:11:31,242 | INFO     | sum of square deviations: 4729621702.0
[2025-07-26 16:46:46] 2025-07-26 08:11:31,244 | INFO     | sum of deviations: -31871814207.499996
[2025-07-26 16:46:46] 2025-07-26 08:11:31,244 | INFO     | mean x: 1753509834.5
[2025-07-26 16:46:46] 2025-07-26 08:11:31,244 | INFO     | mean y: 2503284.6491935486
[2025-07-26 16:46:46] 2025-07-26 08:11:31,245 | INFO     | -- intersect: 11818995845.264576
[2025-07-26 16:46:46] 2025-07-26 08:11:31,245 | INFO     | intersect: 11818995845.264576
[2025-07-26 16:46:46] 2025-07-26 08:11:31,245 | INFO     | chi2: 0.9084154696475838
[2025-07-26 16:46:46] 2025-07-26 08:11:31,245 | INFO     | current chi2=0.9084154696475838 (change=61.244150819221964 %)
[2025-07-26 16:46:46] 2025-07-26 08:11:31,246 | INFO     | sum of square deviations: 4449281562.0
[2025-07-26 16:46:46] 2025-07-26 08:11:31,248 | INFO     | sum of deviations: -28906181263.999996
[2025-07-26 16:46:46] 2025-07-26 08:11:31,248 | INFO     | mean x: 1753509987.0
[2025-07-26 16:46:46] 2025-07-26 08:11:31,248 | INFO     | mean y: 2501642.9218106996
[2025-07-26 16:46:46] 2025-07-26 08:11:31,248 | INFO     | -- intersect: 11394740328.232569
[2025-07-26 16:46:46] 2025-07-26 08:11:31,248 | INFO     | intersect: 11394740328.232569
[2025-07-26 16:46:46] 2025-07-26 08:11:31,249 | INFO     | chi2: 0.892819714830102
[2025-07-26 16:46:46] 2025-07-26 08:11:31,249 | INFO     | current chi2=0.892819714830102 (change=1.71680859018529 %)
[2025-07-26 16:46:46] 2025-07-26 08:11:31,249 | INFO     | left removable region: 20
[2025-07-26 16:46:46] 2025-07-26 08:11:31,249 | INFO     | sum of square deviations: 3392567795.5
[2025-07-26 16:46:46] 2025-07-26 08:11:31,251 | INFO     | sum of deviations: 3729794492.0
[2025-07-26 16:46:46] 2025-07-26 08:11:31,251 | INFO     | mean x: 1753509956.5
[2025-07-26 16:46:46] 2025-07-26 08:11:31,251 | INFO     | mean y: 2500501.945945946
[2025-07-26 16:46:46] 2025-07-26 08:11:31,251 | INFO     | -- intersect: -1925311165.1034234
[2025-07-26 16:46:46] 2025-07-26 08:11:31,251 | INFO     | intersect: -1925311165.1034234
[2025-07-26 16:46:46] 2025-07-26 08:11:31,252 | INFO     | chi2: 0.02550459067089222
[2025-07-26 16:46:46] 2025-07-26 08:11:31,252 | INFO     | -- intersect: -1925311165.1034234
[2025-07-26 16:46:46] 2025-07-26 08:11:31,252 | INFO     | current memory leak: 1.10 B/s (using 222 data points, chi2=0.03)
[2025-07-26 16:46:46] 2025-07-26 08:11:31,253 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-07-26 16:46:46] 2025-07-26 08:11:31,253 | INFO     | ..............................
[2025-07-26 16:46:46] 2025-07-26 08:11:31,253 | INFO     | . Timing measurements:
[2025-07-26 16:46:46] 2025-07-26 08:11:31,253 | INFO     | . get job = 0 s
[2025-07-26 16:46:46] 2025-07-26 08:11:31,253 | INFO     | . initial setup = 2 s
[2025-07-26 16:46:46] 2025-07-26 08:11:31,253 | INFO     | . payload setup = 13 s
[2025-07-26 16:46:46] 2025-07-26 08:11:31,253 | INFO     | . stage-in = 0 s
[2025-07-26 16:46:46] 2025-07-26 08:11:31,254 | INFO     | . payload execution = 15406 s
[2025-07-26 16:46:46] 2025-07-26 08:11:31,254 | INFO     | . stage-out = 3 s
[2025-07-26 16:46:46] 2025-07-26 08:11:31,254 | INFO     | . log creation = 1 s
[2025-07-26 16:46:46] 2025-07-26 08:11:31,254 | INFO     | ..............................
[2025-07-26 16:46:46] 2025-07-26 08:11:31,491 | INFO     | 
[2025-07-26 16:46:46] 2025-07-26 08:11:31,491 | INFO     | job summary report
[2025-07-26 16:46:46] 2025-07-26 08:11:31,491 | INFO     | --------------------------------------------------
[2025-07-26 16:46:46] 2025-07-26 08:11:31,492 | INFO     | PanDA job id: 6745018335
[2025-07-26 16:46:46] 2025-07-26 08:11:31,492 | INFO     | task id: 45743349
[2025-07-26 16:46:46] 2025-07-26 08:11:31,492 | INFO     | errors: (none)
[2025-07-26 16:46:46] 2025-07-26 08:11:31,492 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 16:46:46] 2025-07-26 08:11:31,492 | INFO     | pilot state: finished 
[2025-07-26 16:46:46] 2025-07-26 08:11:31,492 | INFO     | transexitcode: 0
[2025-07-26 16:46:46] 2025-07-26 08:11:31,492 | INFO     | exeerrorcode: 0
[2025-07-26 16:46:46] 2025-07-26 08:11:31,492 | INFO     | exeerrordiag: 
[2025-07-26 16:46:46] 2025-07-26 08:11:31,492 | INFO     | exitcode: 0
[2025-07-26 16:46:46] 2025-07-26 08:11:31,492 | INFO     | exitmsg: OK
[2025-07-26 16:46:46] 2025-07-26 08:11:31,492 | INFO     | cpuconsumptiontime: 59678 s
[2025-07-26 16:46:46] 2025-07-26 08:11:31,492 | INFO     | nevents: 400
[2025-07-26 16:46:46] 2025-07-26 08:11:31,493 | INFO     | neventsw: 0
[2025-07-26 16:46:46] 2025-07-26 08:11:31,493 | INFO     | pid: 18620
[2025-07-26 16:46:46] 2025-07-26 08:11:31,493 | INFO     | pgrp: 18620
[2025-07-26 16:46:46] 2025-07-26 08:11:31,493 | INFO     | corecount: 8
[2025-07-26 16:46:46] 2025-07-26 08:11:31,493 | INFO     | event service: False
[2025-07-26 16:46:46] 2025-07-26 08:11:31,493 | INFO     | sizes: {0: 2397473, 1: 2397473, 8: 2397763, 12: 2397791, 15423: 2428592, 15424: 2428591, 15429: 2437773, 15431: 2437829, 15527: 2438023}
[2025-07-26 16:46:46] 2025-07-26 08:11:31,493 | INFO     | --------------------------------------------------
[2025-07-26 16:46:46] 2025-07-26 08:11:31,493 | INFO     | 
[2025-07-26 16:46:46] 2025-07-26 08:11:31,493 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-07-26 16:46:46] 2025-07-26 08:11:32,062 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,063 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,063 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,063 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,063 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,064 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,064 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,064 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,064 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 16:46:46] 2025-07-26 08:11:32,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,065 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 16:46:46] 2025-07-26 08:11:32,065 | INFO     | job 6745018335 has completed (purged errors)
[2025-07-26 16:46:46] 2025-07-26 08:11:32,065 | INFO     | overall cleanup function is called
[2025-07-26 16:46:46] 2025-07-26 08:11:33,078 | INFO     | --- collectZombieJob: --- 10, [18620]
[2025-07-26 16:46:46] 2025-07-26 08:11:33,078 | INFO     | zombie collector waiting for pid 18620
[2025-07-26 16:46:46] 2025-07-26 08:11:33,078 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 16:46:46] 2025-07-26 08:11:33,079 | INFO     | collected zombie processes
[2025-07-26 16:46:46] 2025-07-26 08:11:33,079 | INFO     | will attempt to kill all subprocesses of pid=18620
[2025-07-26 16:46:46] 2025-07-26 08:11:33,205 | INFO     | process IDs to be killed: [18620] (in reverse order)
[2025-07-26 16:46:46] 2025-07-26 08:11:33,886 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 16:46:46] 2025-07-26 08:11:33,887 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 16:46:46] 2025-07-26 08:11:33,890 | INFO     | did not find any defunct processes belonging to 18620
[2025-07-26 16:46:46] 2025-07-26 08:11:33,893 | INFO     | did not find any defunct processes belonging to 18620
[2025-07-26 16:46:46] 2025-07-26 08:11:33,893 | INFO     | ready for new job
[2025-07-26 16:46:46] 2025-07-26 08:11:33,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 16:46:46] 2025-07-26 08:11:33,895 | INFO     | ***************************************
[2025-07-26 16:46:46] 2025-07-26 08:11:33,895 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 16:46:46] 2025-07-26 08:11:33,895 | INFO     | ***************************************
[2025-07-26 16:46:46] 2025-07-26 08:11:33,895 | INFO     | 
[2025-07-26 16:46:46] 2025-07-26 08:11:33,896 | INFO     | pilot is running in a VM
[2025-07-26 16:46:46] 2025-07-26 08:11:33,896 | INFO     | architecture information:
[2025-07-26 16:46:46] 2025-07-26 08:11:33,906 | INFO     | executing command: cat /etc/os-release
[2025-07-26 16:46:46] 2025-07-26 08:11:34,209 | INFO     | cat /etc/os-release:
[2025-07-26 16:46:46] NAME="CentOS Linux"
[2025-07-26 16:46:46] VERSION="7 (Core)"
[2025-07-26 16:46:46] ID="centos"
[2025-07-26 16:46:46] ID_LIKE="rhel fedora"
[2025-07-26 16:46:46] VERSION_ID="7"
[2025-07-26 16:46:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 16:46:46] ANSI_COLOR="0;31"
[2025-07-26 16:46:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 16:46:46] HOME_URL="https://www.centos.org/"
[2025-07-26 16:46:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 16:46:46] 
[2025-07-26 16:46:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 16:46:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 16:46:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 16:46:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 16:46:46] 
[2025-07-26 16:46:46] 2025-07-26 08:11:34,209 | INFO     | ***************************************
[2025-07-26 16:46:46] 2025-07-26 08:11:34,712 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-07-26 16:46:46] 2025-07-26 08:11:34,937 | INFO     | sufficient remaining disk space (496675848192 B)
[2025-07-26 16:46:46] 2025-07-26 08:11:34,937 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 16:46:46] 2025-07-26 08:11:34,937 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 16:46:46] 2025-07-26 08:11:34,937 | INFO     | update_server=False
[2025-07-26 16:46:46] 2025-07-26 08:11:34,937 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 16:46:46] 2025-07-26 08:11:35,129 | INFO     | all job control threads have been joined
[2025-07-26 16:46:46] 2025-07-26 08:11:35,221 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 16:46:46] 2025-07-26 08:11:35,221 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 16:46:46] 2025-07-26 08:11:35,222 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:46:46] 2025-07-26 08:11:35,222 | INFO     | will abort loop
[2025-07-26 16:46:46] 2025-07-26 08:11:35,387 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 16:46:46] 2025-07-26 08:11:35,837 | INFO     | all payload control threads have been joined
[2025-07-26 16:46:46] 2025-07-26 08:11:35,884 | INFO     | all data control threads have been joined
[2025-07-26 16:46:46] 2025-07-26 08:11:35,943 | INFO     | [job] retrieve thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:36,026 | INFO     | [data] copytool_in thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:36,135 | INFO     | [job] control thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:36,227 | INFO     | [job] job monitor thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:36,346 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 16:46:46] 2025-07-26 08:11:36,368 | INFO     | [payload] validate_post thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:36,407 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:46:46] 2025-07-26 08:11:36,489 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:36,585 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:36,767 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:36,843 | INFO     | [payload] control thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:36,890 | INFO     | [data] control thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:37,243 | INFO     | [payload] failed_post thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:37,411 | INFO     | [job] validate thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:37,413 | INFO     | [job] queue monitor thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:37,418 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:38,352 | INFO     | [data] copytool_out thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:39,396 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 16:46:46] 2025-07-26 08:11:40,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139672285280064)>', '<ExcThread(monitor, started 139671833130752)>']
[2025-07-26 16:46:46] 2025-07-26 08:11:45,190 | INFO     | all workflow threads have been joined
[2025-07-26 16:46:46] 2025-07-26 08:11:45,190 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 16:46:46] 2025-07-26 08:11:45,190 | INFO     | traces error code: 0
[2025-07-26 16:46:46] 2025-07-26 08:11:45,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 16:46:46] 2025-07-26 08:12:04,370 | INFO     | PID=12101 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 16:46:46] 2025-07-26 08:12:04,511 | INFO     | .. there are 9 such processes running
[2025-07-26 16:46:46] 2025-07-26 08:12:04,512 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 16:46:46] 2025-07-26 08:12:04,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 16:46:46] 2025-07-26 08:12:04,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 16:46:46] 2025-07-26 08:12:04,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 16:46:46] 2025-07-26 08:12:04,513 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 16:46:46] 2025-07-26 08:12:04,513 | INFO     | [monitor] control thread has ended
[2025-07-26 16:46:46] 2025-07-26 08:12:04,880 [wrapper] ==== pilot stdout END ====
[2025-07-26 16:46:46] 2025-07-26 08:12:04,959 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 16:46:46] 2025-07-26 08:12:05,040 [wrapper] pilotpid: 12101
[2025-07-26 16:46:46] 2025-07-26 08:12:05,135 [wrapper] Pilot exit status: 0
[2025-07-26 16:46:46] 2025-07-26 08:12:05,612 [wrapper] pandaids: 6745018335
[2025-07-26 16:46:46] 2025-07-26 08:12:06,295 [wrapper] cleanup supervisor_pilot 28376 12102
[2025-07-26 16:46:46] 2025-07-26 08:12:06,369 [wrapper] Test setup, not cleaning
[2025-07-26 16:46:46] 2025-07-26 08:12:06,476 [wrapper] apfmon messages muted
[2025-07-26 16:46:46] 2025-07-26 08:12:06,587 [wrapper] ==== wrapper stdout END ====
[2025-07-26 16:46:46] 2025-07-26 08:12:06,726 [wrapper] ==== wrapper stderr END ====
[2025-07-26 16:46:46]  *** Error codes and diagnostics ***
[2025-07-26 16:46:46]     "exeErrorCode": 0,
[2025-07-26 16:46:46]     "exeErrorDiag": "",
[2025-07-26 16:46:46]     "pilotErrorCode": 0,
[2025-07-26 16:46:46]     "pilotErrorDiag": "",
[2025-07-26 16:46:46]  *** Listing of results directory ***
[2025-07-26 16:46:46] total 352908
[2025-07-26 16:46:46] -rw-r--r--. 1 boinc boinc    530466 Jul 25 13:59 pilot3.tar.gz
[2025-07-26 16:46:46] -rw-r--r--. 1 boinc boinc      5112 Jul 25 14:06 queuedata.json
[2025-07-26 16:46:46] -rwx------. 1 boinc boinc     36292 Jul 25 14:06 runpilot2-wrapper.sh
[2025-07-26 16:46:46] -rw-r--r--. 1 boinc boinc       100 Jul 26 05:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 16:46:46] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 05:51 run_atlas
[2025-07-26 16:46:46] -rw-r--r--. 1 boinc boinc       105 Jul 26 05:51 job.xml
[2025-07-26 16:46:46] -rw-r--r--. 1 boinc boinc      6391 Jul 26 05:52 init_data.xml
[2025-07-26 16:46:46] -rw-r--r--. 2 boinc boinc 145513348 Jul 26 05:52 EVNT.45743347._001196.pool.root.1
[2025-07-26 16:46:46] -rw-r--r--. 2 boinc boinc     15095 Jul 26 05:52 start_atlas.sh
[2025-07-26 16:46:46] drwxrwx--x. 2 boinc boinc        68 Jul 26 05:52 shared
[2025-07-26 16:46:46] -rw-r--r--. 2 boinc boinc    542893 Jul 26 05:52 input.tar.gz
[2025-07-26 16:46:46] -rw-r--r--. 1 boinc boinc         0 Jul 26 05:52 boinc_lockfile
[2025-07-26 16:46:46] -rw-r--r--. 1 boinc boinc      2562 Jul 26 05:52 pandaJob.out
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc    980001 Jul 26 05:52 agis_schedconf.cvmfs.json
[2025-07-26 16:46:46] drwx------. 4 boinc boinc      4096 Jul 26 05:52 pilot3
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc 208537724 Jul 26 10:08 HITS.45743349._020830.pool.root.1
[2025-07-26 16:46:46] -rw-r--r--. 1 boinc boinc       531 Jul 26 10:08 boinc_task_state.xml
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc      1018 Jul 26 10:09 memory_monitor_summary.json
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc   1593052 Jul 26 10:09 agis_ddmendpoints.agis.ALL.json
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc    396544 Jul 26 10:09 log.45743349._020830.job.log.tgz.1
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc      7777 Jul 26 10:11 heartbeat.json
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc        95 Jul 26 10:12 pilot_heartbeat.json
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc       890 Jul 26 10:12 pilotlog.txt
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc   1337173 Jul 26 10:12 log.45743349._020830.job.log.1
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc       357 Jul 26 10:12 output.list
[2025-07-26 16:46:46] -rw-r--r--. 1 boinc boinc       620 Jul 26 10:12 runtime_log
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc   1751040 Jul 26 10:12 result.tar.gz
[2025-07-26 16:46:46] -rw-r--r--. 1 boinc boinc      8660 Jul 26 10:12 runtime_log.err
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc       657 Jul 26 10:12 2xoMDmINWz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6VPLDmiEhkNm.diag
[2025-07-26 16:46:46] -rw-r--r--. 1 boinc boinc      8192 Jul 26 16:46 boinc_mmap_file
[2025-07-26 16:46:46] -rw-r--r--. 1 boinc boinc        28 Jul 26 16:46 wrapper_checkpoint.txt
[2025-07-26 16:46:46] -rw-r--r--. 1 boinc boinc     20618 Jul 26 16:46 stderr.txt
[2025-07-26 16:46:46] HITS file was successfully produced:
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc 208537724 Jul 26 10:08 shared/HITS.pool.root.1
[2025-07-26 16:46:46]  *** Contents of shared directory: ***
[2025-07-26 16:46:46] total 348016
[2025-07-26 16:46:46] -rw-r--r--. 2 boinc boinc 145513348 Jul 26 05:52 ATLAS.root_0
[2025-07-26 16:46:46] -rw-r--r--. 2 boinc boinc     15095 Jul 26 05:52 start_atlas.sh
[2025-07-26 16:46:46] -rw-r--r--. 2 boinc boinc    542893 Jul 26 05:52 input.tar.gz
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc 208537724 Jul 26 10:08 HITS.pool.root.1
[2025-07-26 16:46:46] -rw-------. 1 boinc boinc   1751040 Jul 26 10:12 result.tar.gz
16:46:48 (8096): run_atlas exited; CPU time 59868.806461
16:46:48 (8096): called boinc_finish(0)

</stderr_txt>
]]>

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