Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:35:31 (3229159): wrapper (7.7.26015): starting
22:35:31 (3229159): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 22:35:31] Arguments: --nthreads 4
[2025-07-27 22:35:31] Threads: 4
[2025-07-27 22:35:31] Checking for CVMFS
[2025-07-27 22:35:31] No cvmfs_config command found, will try listing directly
[2025-07-27 22:35:31] CVMFS is ok
[2025-07-27 22:35:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:35:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:35:31] Further information can be found at the LHC@home message board.
[2025-07-27 22:35:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:35:31] Checking for apptainer binary...
[2025-07-27 22:35:31] which: no apptainer in ((null))
[2025-07-27 22:35:31] apptainer is not installed, using version from CVMFS
[2025-07-27 22:35:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:35:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-07-27 22:35:32] apptainer works
[2025-07-27 22:35:32] Set ATHENA_PROC_NUMBER=4
[2025-07-27 22:35:32] Set ATHENA_CORE_NUMBER=4
[2025-07-27 22:35:32] Starting ATLAS job with PandaID=6745016272
[2025-07-27 22:35:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:01:41 (3361201): wrapper (7.7.26015): starting
23:01:41 (3361201): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 23:01:41] Arguments: --nthreads 4
[2025-07-27 23:01:41] Threads: 4
[2025-07-27 23:01:41] This job has been restarted, cleaning up previous attempt
[2025-07-27 23:01:41] Checking for CVMFS
[2025-07-27 23:01:41] No cvmfs_config command found, will try listing directly
[2025-07-27 23:01:41] CVMFS is ok
[2025-07-27 23:01:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:01:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:01:41] Further information can be found at the LHC@home message board.
[2025-07-27 23:01:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:01:41] Checking for apptainer binary...
[2025-07-27 23:01:41] which: no apptainer in ((null))
[2025-07-27 23:01:41] apptainer is not installed, using version from CVMFS
[2025-07-27 23:01:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:01:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-07-27 23:01:41] apptainer works
[2025-07-27 23:01:41] Set ATHENA_PROC_NUMBER=4
[2025-07-27 23:01:41] Set ATHENA_CORE_NUMBER=4
[2025-07-27 23:01:41] Starting ATLAS job with PandaID=6745016272
[2025-07-27 23:01:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:58:22]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:58:22] 2025-07-27 23:57:49,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:58:22] 2025-07-27 23:57:49,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:58:22] 2025-07-27 23:57:49,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:58:22] 2025-07-27 23:57:49,934 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:58:22] 2025-07-27 23:57:49,934 | INFO     | sum of square deviations: 1605470102.0
[2025-07-28 01:58:22] 2025-07-27 23:57:49,935 | INFO     | sum of deviations: 16459856005.000004
[2025-07-28 01:58:22] 2025-07-27 23:57:49,935 | INFO     | mean x: 1753655394.0
[2025-07-28 01:58:22] 2025-07-27 23:57:49,935 | INFO     | mean y: 2298037.7630057805
[2025-07-28 01:58:22] 2025-07-27 23:57:49,936 | INFO     | -- intersect: -17976806793.696228
[2025-07-28 01:58:22] 2025-07-27 23:57:49,936 | INFO     | intersect: -17976806793.696228
[2025-07-28 01:58:22] 2025-07-27 23:57:49,936 | INFO     | chi2: 2.241419737643387
[2025-07-28 01:58:22] 2025-07-27 23:57:49,936 | INFO     | sum of square deviations: 1470248962.0
[2025-07-28 01:58:22] 2025-07-27 23:57:49,937 | INFO     | sum of deviations: 26609500581.0
[2025-07-28 01:58:22] 2025-07-27 23:57:49,937 | INFO     | mean x: 1753655241.5
[2025-07-28 01:58:22] 2025-07-27 23:57:49,938 | INFO     | mean y: 2309194.035714286
[2025-07-28 01:58:22] 2025-07-27 23:57:49,938 | INFO     | -- intersect: -31736458438.957825
[2025-07-28 01:58:22] 2025-07-27 23:57:49,938 | INFO     | intersect: -31736458438.957825
[2025-07-28 01:58:22] 2025-07-27 23:57:49,938 | INFO     | chi2: 1.426774892878464
[2025-07-28 01:58:22] 2025-07-27 23:57:49,938 | INFO     | current chi2=1.426774892878464 (change=36.34503752614558 %)
[2025-07-28 01:58:22] 2025-07-27 23:57:49,939 | INFO     | sum of square deviations: 1342841922.0
[2025-07-28 01:58:22] 2025-07-27 23:57:49,940 | INFO     | sum of deviations: 25577633304.0
[2025-07-28 01:58:22] 2025-07-27 23:57:49,940 | INFO     | mean x: 1753655089.0
[2025-07-28 01:58:22] 2025-07-27 23:57:49,940 | INFO     | mean y: 2307958.582822086
[2025-07-28 01:58:22] 2025-07-27 23:57:49,940 | INFO     | -- intersect: -33400243803.67552
[2025-07-28 01:58:22] 2025-07-27 23:57:49,940 | INFO     | intersect: -33400243803.67552
[2025-07-28 01:58:22] 2025-07-27 23:57:49,940 | INFO     | chi2: 1.4278205934988442
[2025-07-28 01:58:22] 2025-07-27 23:57:49,940 | INFO     | current chi2=1.4278205934988442 (change=-0.07329121262222786 %)
[2025-07-28 01:58:22] 2025-07-27 23:57:49,940 | INFO     | right removable region: 162
[2025-07-28 01:58:22] 2025-07-27 23:57:49,941 | INFO     | sum of square deviations: 1470248962.0
[2025-07-28 01:58:22] 2025-07-27 23:57:49,942 | INFO     | sum of deviations: -6873520595.5
[2025-07-28 01:58:22] 2025-07-27 23:57:49,942 | INFO     | mean x: 1753655546.5
[2025-07-28 01:58:22] 2025-07-27 23:57:49,942 | INFO     | mean y: 2323970.1964285714
[2025-07-28 01:58:22] 2025-07-27 23:57:49,942 | INFO     | -- intersect: 8200790915.470529
[2025-07-28 01:58:22] 2025-07-27 23:57:49,942 | INFO     | intersect: 8200790915.470529
[2025-07-28 01:58:22] 2025-07-27 23:57:49,942 | INFO     | chi2: 0.840780287762001
[2025-07-28 01:58:22] 2025-07-27 23:57:49,943 | INFO     | current chi2=0.840780287762001 (change=62.48894066374236 %)
[2025-07-28 01:58:22] 2025-07-27 23:57:49,943 | INFO     | sum of square deviations: 1342841922.0
[2025-07-28 01:58:22] 2025-07-27 23:57:49,944 | INFO     | sum of deviations: -6317570652.000001
[2025-07-28 01:58:22] 2025-07-27 23:57:49,944 | INFO     | mean x: 1753655699.0
[2025-07-28 01:58:22] 2025-07-27 23:57:49,944 | INFO     | mean y: 2323298.8282208587
[2025-07-28 01:58:22] 2025-07-27 23:57:49,944 | INFO     | -- intersect: 8252619626.496004
[2025-07-28 01:58:22] 2025-07-27 23:57:49,944 | INFO     | intersect: 8252619626.496004
[2025-07-28 01:58:22] 2025-07-27 23:57:49,944 | INFO     | chi2: 0.8407273250781515
[2025-07-28 01:58:22] 2025-07-27 23:57:49,945 | INFO     | current chi2=0.8407273250781515 (change=0.006299229967729559 %)
[2025-07-28 01:58:22] 2025-07-27 23:57:49,945 | INFO     | left removable region: 20
[2025-07-28 01:58:22] 2025-07-27 23:57:49,945 | INFO     | sum of square deviations: 887813855.5
[2025-07-28 01:58:22] 2025-07-27 23:57:49,946 | INFO     | sum of deviations: 2620018045.4999995
[2025-07-28 01:58:22] 2025-07-27 23:57:49,946 | INFO     | mean x: 1753655668.5
[2025-07-28 01:58:22] 2025-07-27 23:57:49,946 | INFO     | mean y: 2336769.3028169014
[2025-07-28 01:58:22] 2025-07-27 23:57:49,946 | INFO     | -- intersect: -5172857860.2918825
[2025-07-28 01:58:22] 2025-07-27 23:57:49,946 | INFO     | intersect: -5172857860.2918825
[2025-07-28 01:58:22] 2025-07-27 23:57:49,946 | INFO     | chi2: 0.0001403864220461396
[2025-07-28 01:58:22] 2025-07-27 23:57:49,946 | INFO     | -- intersect: -5172857860.2918825
[2025-07-28 01:58:22] 2025-07-27 23:57:49,947 | INFO     | current memory leak: 2.95 B/s (using 142 data points, chi2=0.00)
[2025-07-28 01:58:22] 2025-07-27 23:57:49,947 | INFO     | could have reported an average CPU frequency of 2689 MHz (9 samples)
[2025-07-28 01:58:22] 2025-07-27 23:57:49,947 | INFO     | ..............................
[2025-07-28 01:58:22] 2025-07-27 23:57:49,947 | INFO     | . Timing measurements:
[2025-07-28 01:58:22] 2025-07-27 23:57:49,947 | INFO     | . get job = 0 s
[2025-07-28 01:58:22] 2025-07-27 23:57:49,947 | INFO     | . initial setup = 1 s
[2025-07-28 01:58:22] 2025-07-27 23:57:49,947 | INFO     | . payload setup = 9 s
[2025-07-28 01:58:22] 2025-07-27 23:57:49,948 | INFO     | . stage-in = 0 s
[2025-07-28 01:58:22] 2025-07-27 23:57:49,948 | INFO     | . payload execution = 10513 s
[2025-07-28 01:58:22] 2025-07-27 23:57:49,948 | INFO     | . stage-out = 1 s
[2025-07-28 01:58:22] 2025-07-27 23:57:49,948 | INFO     | . log creation = 0 s
[2025-07-28 01:58:22] 2025-07-27 23:57:49,948 | INFO     | ..............................
[2025-07-28 01:58:22] 2025-07-27 23:57:50,225 | INFO     | 
[2025-07-28 01:58:22] 2025-07-27 23:57:50,226 | INFO     | job summary report
[2025-07-28 01:58:22] 2025-07-27 23:57:50,226 | INFO     | --------------------------------------------------
[2025-07-28 01:58:22] 2025-07-27 23:57:50,226 | INFO     | PanDA job id: 6745016272
[2025-07-28 01:58:22] 2025-07-27 23:57:50,226 | INFO     | task id: 45743349
[2025-07-28 01:58:22] 2025-07-27 23:57:50,226 | INFO     | errors: (none)
[2025-07-28 01:58:22] 2025-07-27 23:57:50,226 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:58:22] 2025-07-27 23:57:50,226 | INFO     | pilot state: finished 
[2025-07-28 01:58:22] 2025-07-27 23:57:50,226 | INFO     | transexitcode: 0
[2025-07-28 01:58:22] 2025-07-27 23:57:50,226 | INFO     | exeerrorcode: 0
[2025-07-28 01:58:22] 2025-07-27 23:57:50,227 | INFO     | exeerrordiag: 
[2025-07-28 01:58:22] 2025-07-27 23:57:50,227 | INFO     | exitcode: 0
[2025-07-28 01:58:22] 2025-07-27 23:57:50,227 | INFO     | exitmsg: OK
[2025-07-28 01:58:22] 2025-07-27 23:57:50,227 | INFO     | cpuconsumptiontime: 40422 s
[2025-07-28 01:58:22] 2025-07-27 23:57:50,227 | INFO     | nevents: 400
[2025-07-28 01:58:22] 2025-07-27 23:57:50,227 | INFO     | neventsw: 0
[2025-07-28 01:58:22] 2025-07-27 23:57:50,227 | INFO     | pid: 3372956
[2025-07-28 01:58:22] 2025-07-27 23:57:50,227 | INFO     | pgrp: 3372956
[2025-07-28 01:58:22] 2025-07-27 23:57:50,227 | INFO     | corecount: 4
[2025-07-28 01:58:22] 2025-07-27 23:57:50,227 | INFO     | event service: False
[2025-07-28 01:58:22] 2025-07-27 23:57:50,227 | INFO     | sizes: {0: 2397485, 7: 2397747, 11: 2397775, 10527: 2427079, 10529: 2436101, 10531: 2436157, 10538: 2436543}
[2025-07-28 01:58:22] 2025-07-27 23:57:50,228 | INFO     | --------------------------------------------------
[2025-07-28 01:58:22] 2025-07-27 23:57:50,228 | INFO     | 
[2025-07-28 01:58:22] 2025-07-27 23:57:50,228 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-07-28 01:58:22] 2025-07-27 23:57:50,255 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,255 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,256 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,256 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,256 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,256 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,257 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,257 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,257 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,257 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,257 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,257 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:58:22] 2025-07-27 23:57:50,257 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,257 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:58:22] 2025-07-27 23:57:50,257 | INFO     | job 6745016272 has completed (purged errors)
[2025-07-28 01:58:22] 2025-07-27 23:57:50,257 | INFO     | overall cleanup function is called
[2025-07-28 01:58:22] 2025-07-27 23:57:51,266 | INFO     | --- collectZombieJob: --- 10, [3372956]
[2025-07-28 01:58:22] 2025-07-27 23:57:51,267 | INFO     | zombie collector waiting for pid 3372956
[2025-07-28 01:58:22] 2025-07-27 23:57:51,267 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:58:22] 2025-07-27 23:57:51,267 | INFO     | collected zombie processes
[2025-07-28 01:58:22] 2025-07-27 23:57:51,267 | INFO     | will attempt to kill all subprocesses of pid=3372956
[2025-07-28 01:58:22] 2025-07-27 23:57:51,944 | INFO     | process IDs to be killed: [3372956] (in reverse order)
[2025-07-28 01:58:22] 2025-07-27 23:57:52,202 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:58:22] 2025-07-27 23:57:52,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:58:22] 2025-07-27 23:57:52,228 | INFO     | did not find any defunct processes belonging to 3372956
[2025-07-28 01:58:22] 2025-07-27 23:57:52,248 | INFO     | did not find any defunct processes belonging to 3372956
[2025-07-28 01:58:22] 2025-07-27 23:57:52,248 | INFO     | ready for new job
[2025-07-28 01:58:22] 2025-07-27 23:57:52,249 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:58:22] 2025-07-27 23:57:52,251 | INFO     | ***************************************
[2025-07-28 01:58:22] 2025-07-27 23:57:52,251 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:58:22] 2025-07-27 23:57:52,251 | INFO     | ***************************************
[2025-07-28 01:58:22] 2025-07-27 23:57:52,251 | INFO     | 
[2025-07-28 01:58:22] 2025-07-27 23:57:52,259 | INFO     | architecture information:
[2025-07-28 01:58:22] 2025-07-27 23:57:52,259 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:58:22] 2025-07-27 23:57:52,283 | INFO     | cat /etc/os-release:
[2025-07-28 01:58:22] NAME="CentOS Linux"
[2025-07-28 01:58:22] VERSION="7 (Core)"
[2025-07-28 01:58:22] ID="centos"
[2025-07-28 01:58:22] ID_LIKE="rhel fedora"
[2025-07-28 01:58:22] VERSION_ID="7"
[2025-07-28 01:58:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:58:22] ANSI_COLOR="0;31"
[2025-07-28 01:58:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:58:22] HOME_URL="https://www.centos.org/"
[2025-07-28 01:58:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:58:22] 
[2025-07-28 01:58:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:58:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:58:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:58:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:58:22] 
[2025-07-28 01:58:22] 2025-07-27 23:57:52,284 | INFO     | ***************************************
[2025-07-28 01:58:22] 2025-07-27 23:57:52,785 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-07-28 01:58:22] 2025-07-27 23:57:52,811 | INFO     | sufficient remaining disk space (3304536932352 B)
[2025-07-28 01:58:22] 2025-07-27 23:57:52,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:58:22] 2025-07-27 23:57:52,811 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:58:22] 2025-07-27 23:57:52,811 | INFO     | update_server=False
[2025-07-28 01:58:22] 2025-07-27 23:57:52,811 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:58:22] 2025-07-27 23:57:52,812 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:58:22] 2025-07-27 23:57:52,812 | INFO     | aborting loop
[2025-07-28 01:58:22] 2025-07-27 23:57:53,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:58:22] 2025-07-27 23:57:53,670 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:58:22] 2025-07-27 23:57:53,817 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:53,817 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:53,864 | INFO     | all data control threads have been joined
[2025-07-28 01:58:22] 2025-07-27 23:57:53,961 | INFO     | all job control threads have been joined
[2025-07-28 01:58:22] 2025-07-27 23:57:53,997 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:54,083 | INFO     | all payload control threads have been joined
[2025-07-28 01:58:22] 2025-07-27 23:57:54,289 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:54,331 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:54,345 | INFO     | [job] validate thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:54,590 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:54,733 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:54,824 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:54,869 | INFO     | [data] control thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:54,966 | INFO     | [job] control thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:55,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:58:22] 2025-07-27 23:57:55,088 | INFO     | [payload] control thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:55,676 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:56,063 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:57:57,420 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:58:02,933 | INFO     | job.realtimelogging is not enabled
[2025-07-28 01:58:22] 2025-07-27 23:58:03,938 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:58:22] 2025-07-27 23:58:05,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22690091366208)>', '<ExcThread(monitor, started 22689857107712)>']
[2025-07-28 01:58:22] 2025-07-27 23:58:10,104 | INFO     | all workflow threads have been joined
[2025-07-28 01:58:22] 2025-07-27 23:58:10,105 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:58:22] 2025-07-27 23:58:10,105 | INFO     | traces error code: 0
[2025-07-28 01:58:22] 2025-07-27 23:58:10,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:58:22] 2025-07-27 23:58:22,386 | INFO     | PID=3365434 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-28 01:58:22] 2025-07-27 23:58:22,387 | INFO     | .. there are 26 such processes running
[2025-07-28 01:58:22] 2025-07-27 23:58:22,388 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:58:22] 2025-07-27 23:58:22,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:58:22] 2025-07-27 23:58:22,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:58:22] 2025-07-27 23:58:22,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:58:22] 2025-07-27 23:58:22,388 | INFO     | [monitor] control thread has ended
[2025-07-28 01:58:22] 2025-07-27 23:58:22,530 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:58:22] 2025-07-27 23:58:22,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:58:22] 2025-07-27 23:58:22,537 [wrapper] pilotpid: 3365434
[2025-07-28 01:58:22] 2025-07-27 23:58:22,541 [wrapper] Pilot exit status: 0
[2025-07-28 01:58:22] 2025-07-27 23:58:22,558 [wrapper] pandaids: 6745016272 6745016272
[2025-07-28 01:58:22] 2025-07-27 23:58:22,703 [wrapper] cleanup supervisor_pilot  152256 3365435
[2025-07-28 01:58:22] 2025-07-27 23:58:22,709 [wrapper] Test setup, not cleaning
[2025-07-28 01:58:22] 2025-07-27 23:58:22,713 [wrapper] apfmon messages muted
[2025-07-28 01:58:22] 2025-07-27 23:58:22,717 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:58:22] 2025-07-27 23:58:22,720 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:58:22]  *** Error codes and diagnostics ***
[2025-07-28 01:58:22]     "exeErrorCode": 0,
[2025-07-28 01:58:22]     "exeErrorDiag": "",
[2025-07-28 01:58:22]     "pilotErrorCode": 0,
[2025-07-28 01:58:22]     "pilotErrorDiag": "",
[2025-07-28 01:58:22]  *** Listing of results directory ***
[2025-07-28 01:58:22] total 502780
[2025-07-28 01:58:22] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-28 01:58:22] -rw-r--r-- 1 boinc boinc      5112 Jul 25 13:38 queuedata.json
[2025-07-28 01:58:22] -rw-r--r-- 1 boinc boinc    530466 Jul 25 13:39 pilot3.tar.gz
[2025-07-28 01:58:22] -rwx------ 1 boinc boinc     36292 Jul 25 13:41 runpilot2-wrapper.sh
[2025-07-28 01:58:22] -rw-r--r-- 1 boinc boinc       100 Jul 27 22:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:58:22] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 22:35 run_atlas
[2025-07-28 01:58:22] -rw-r--r-- 1 boinc boinc       105 Jul 27 22:35 job.xml
[2025-07-28 01:58:22] -rw-r--r-- 3 boinc boinc 149445846 Jul 27 22:35 EVNT.45743347._001176.pool.root.1
[2025-07-28 01:58:22] -rw-r--r-- 3 boinc boinc 149445846 Jul 27 22:35 ATLAS.root_0
[2025-07-28 01:58:22] -rw-r--r-- 2 boinc boinc     15095 Jul 27 22:35 start_atlas.sh
[2025-07-28 01:58:22] drwxrwx--x 2 boinc boinc      4096 Jul 27 22:35 shared
[2025-07-28 01:58:22] -rw-r--r-- 2 boinc boinc    542890 Jul 27 22:35 input.tar.gz
[2025-07-28 01:58:22] -rw-r--r-- 1 boinc boinc         0 Jul 27 22:35 boinc_lockfile
[2025-07-28 01:58:22] -rw-r--r-- 1 boinc boinc      2562 Jul 27 23:01 pandaJob.out
[2025-07-28 01:58:22] -rw------- 1 boinc boinc    980109 Jul 27 23:01 agis_schedconf.cvmfs.json
[2025-07-28 01:58:22] -rw-r--r-- 1 boinc boinc      6697 Jul 27 23:37 init_data.xml
[2025-07-28 01:58:22] -rw-r--r-- 1 boinc boinc       529 Jul 28 01:57 boinc_task_state.xml
[2025-07-28 01:58:22] -rw------- 1 boinc boinc 209484658 Jul 28 01:57 HITS.45743349._020526.pool.root.1
[2025-07-28 01:58:22] -rw------- 1 boinc boinc      1031 Jul 28 01:57 memory_monitor_summary.json
[2025-07-28 01:58:22] -rw------- 1 boinc boinc   1593052 Jul 28 01:57 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:58:22] -rw------- 1 boinc boinc    303802 Jul 28 01:57 log.45743349._020526.job.log.tgz.1
[2025-07-28 01:58:22] -rw------- 1 boinc boinc      7785 Jul 28 01:57 heartbeat.json
[2025-07-28 01:58:22] -rw-r--r-- 1 boinc boinc      8192 Jul 28 01:58 boinc_mmap_file
[2025-07-28 01:58:22] -rw-r--r-- 1 boinc boinc        27 Jul 28 01:58 wrapper_checkpoint.txt
[2025-07-28 01:58:22] -rw------- 1 boinc boinc       824 Jul 28 01:58 pilotlog.txt
[2025-07-28 01:58:22] -rw------- 1 boinc boinc        96 Jul 28 01:58 pilot_heartbeat.json
[2025-07-28 01:58:22] -rw------- 1 boinc boinc    991807 Jul 28 01:58 log.45743349._020526.job.log.1
[2025-07-28 01:58:22] -rw------- 1 boinc boinc       357 Jul 28 01:58 output.list
[2025-07-28 01:58:22] -rw-r--r-- 1 boinc boinc       620 Jul 28 01:58 runtime_log
[2025-07-28 01:58:22] -rw------- 1 boinc boinc   1310720 Jul 28 01:58 result.tar.gz
[2025-07-28 01:58:22] -rw------- 1 boinc boinc       789 Jul 28 01:58 x37KDmTzVz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlSPLDmuHyFnn.diag
[2025-07-28 01:58:22] -rw-r--r-- 1 boinc boinc      9119 Jul 28 01:58 runtime_log.err
[2025-07-28 01:58:22] -rw-r--r-- 1 boinc boinc     22591 Jul 28 01:58 stderr.txt
[2025-07-28 01:58:22] HITS file was successfully produced:
[2025-07-28 01:58:22] -rw------- 1 boinc boinc 209484658 Jul 28 01:57 shared/HITS.pool.root.1
[2025-07-28 01:58:22]  *** Contents of shared directory: ***
[2025-07-28 01:58:22] total 352356
[2025-07-28 01:58:22] -rw-r--r-- 3 boinc boinc 149445846 Jul 27 22:35 ATLAS.root_0
[2025-07-28 01:58:22] -rw-r--r-- 2 boinc boinc     15095 Jul 27 22:35 start_atlas.sh
[2025-07-28 01:58:22] -rw-r--r-- 2 boinc boinc    542890 Jul 27 22:35 input.tar.gz
[2025-07-28 01:58:22] -rw------- 1 boinc boinc 209484658 Jul 28 01:57 HITS.pool.root.1
[2025-07-28 01:58:22] -rw------- 1 boinc boinc   1310720 Jul 28 01:58 result.tar.gz
01:58:24 (3361201): run_atlas exited; CPU time 41038.164276
01:58:24 (3361201): called boinc_finish(0)

</stderr_txt>
]]>

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