Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:06:34 (63350): wrapper (7.7.26015): starting
09:06:34 (63350): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 09:06:34] Arguments: --nthreads 4
[2025-07-26 09:06:34] Threads: 4
[2025-07-26 09:06:34] Checking for CVMFS
[2025-07-26 09:06:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 09:06:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 09:06:34] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 09:06:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 09:06:34] 2.9.2.0 2492853 6349 97220 148767 2 57 21498803 36864000 0 130560 0 4575019 99.989 233695 2896 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-26 09:06:34] CVMFS is ok
[2025-07-26 09:06:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 09:06:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 09:06:34] Further information can be found at the LHC@home message board.
[2025-07-26 09:06:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 09:06:34] Checking for apptainer binary...
[2025-07-26 09:06:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 09:06:34] Running /usr/bin/apptainer --version
[2025-07-26 09:06:34] apptainer version 1.4.1-1.1
[2025-07-26 09:06:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 09:06:34] magicA250
[2025-07-26 09:06:34] apptainer works
[2025-07-26 09:06:34] Set ATHENA_PROC_NUMBER=4
[2025-07-26 09:06:34] Set ATHENA_CORE_NUMBER=4
[2025-07-26 09:06:34] Starting ATLAS job with PandaID=6744939188
[2025-07-26 09:06:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 10:28:04]  *** The last 200 lines of the pilot log: ***
[2025-07-26 10:28:04]  protocol_id=None
[2025-07-26 10:28:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 10:28:04]  replicas=None
[2025-07-26 10:28:04]  scope=mc23_13p6TeV
[2025-07-26 10:28:04]  status=None
[2025-07-26 10:28:04]  status_code=0
[2025-07-26 10:28:04]  storage_token=
[2025-07-26 10:28:04]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6744939188/log.45743349._012813.job.log.tgz.1
[2025-07-26 10:28:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/a6/log.45743349._012813.job.log.tgz.1
[2025-07-26 10:28:04]  workdir=None
[2025-07-26 10:28:04] ]
[2025-07-26 10:28:04] 2025-07-26 08:27:24,220 | INFO     | transferring file log.45743349._012813.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6744939188/log.45743349._012813.job.log.tgz.1 to /local/data/boinc/
[2025-07-26 10:28:04] 2025-07-26 08:27:24,220 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6744939188/log.45743349._012813.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0128
[2025-07-26 10:28:04] 2025-07-26 08:27:24,239 | INFO     | adding to output.list: log.45743349._012813.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/a6/log.45743349._012813.job.log.tg
[2025-07-26 10:28:04] 2025-07-26 08:27:24,239 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 10:28:04] 2025-07-26 08:27:24,239 | INFO     | summary of transferred files:
[2025-07-26 10:28:04] 2025-07-26 08:27:24,239 | INFO     |  -- lfn=log.45743349._012813.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 10:28:04] 2025-07-26 08:27:24,240 | INFO     | stage-out finished correctly
[2025-07-26 10:28:04] 2025-07-26 08:27:24,622 | INFO     | monitor loop #373: job 0:6744939188 is in state 'finished'
[2025-07-26 10:28:04] 2025-07-26 08:27:24,622 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 10:28:04] 2025-07-26 08:27:24,856 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 10:28:04] 2025-07-26 08:27:25,984 | INFO     | PID=67062 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 10:28:04] 2025-07-26 08:27:26,850 | INFO     | job 6744939188 has state=finished
[2025-07-26 10:28:04] 2025-07-26 08:27:26,850 | INFO     | preparing for final server update for job 6744939188 in state='finished'
[2025-07-26 10:28:04] 2025-07-26 08:27:26,850 | INFO     | this job has now completed (state=finished)
[2025-07-26 10:28:04] 2025-07-26 08:27:26,850 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 10:28:04] 2025-07-26 08:27:26,850 | INFO     | log transfer has been attempted: DONE
[2025-07-26 10:28:04] 2025-07-26 08:27:26,850 | INFO     | job 6744939188 has finished - writing final server update
[2025-07-26 10:28:04] 2025-07-26 08:27:26,851 | INFO     | total number of processed events: 400 (read)
[2025-07-26 10:28:04] 2025-07-26 08:27:26,851 | INFO     | executing command: lscpu
[2025-07-26 10:28:04] 2025-07-26 08:27:26,872 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 10:28:04] 2025-07-26 08:27:27,126 | INFO     | monitor loop #374: job 0:6744939188 is in state 'finished'
[2025-07-26 10:28:04] 2025-07-26 08:27:27,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 10:28:04] 2025-07-26 08:27:29,629 | INFO     | monitor loop #375: job 0:6744939188 is in state 'finished'
[2025-07-26 10:28:04] 2025-07-26 08:27:29,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 10:28:04] 2025-07-26 08:27:32,131 | INFO     | monitor loop #376: job 0:6744939188 is in state 'finished'
[2025-07-26 10:28:04] 2025-07-26 08:27:32,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 10:28:04] 2025-07-26 08:27:32,188 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 10:28:04] 2025-07-26 08:27:32,190 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3712.77475
[2025-07-26 10:28:04] 2025-07-26 08:27:32,191 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744939188/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 10:28:04] 2025-07-26 08:27:32,192 | INFO     | extracted standard info from prmon json
[2025-07-26 10:28:04] 2025-07-26 08:27:32,192 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 10:28:04] 2025-07-26 08:27:32,192 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 10:28:04] 2025-07-26 08:27:32,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 10:28:04] 2025-07-26 08:27:32,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 10:28:04] 2025-07-26 08:27:32,193 | INFO     | fitting pss+swap vs Time
[2025-07-26 10:28:04] 2025-07-26 08:27:32,193 | INFO     | sum of square deviations: 115715658.0
[2025-07-26 10:28:04] 2025-07-26 08:27:32,193 | INFO     | sum of deviations: -2539156476.0
[2025-07-26 10:28:04] 2025-07-26 08:27:32,193 | INFO     | mean x: 1753516096.5
[2025-07-26 10:28:04] 2025-07-26 08:27:32,193 | INFO     | mean y: 2433411.638888889
[2025-07-26 10:28:04] 2025-07-26 08:27:32,193 | INFO     | -- intersect: 38479955202.148994
[2025-07-26 10:28:04] 2025-07-26 08:27:32,193 | INFO     | intersect: 38479955202.148994
[2025-07-26 10:28:04] 2025-07-26 08:27:32,193 | INFO     | chi2: 0.09005484633399184
[2025-07-26 10:28:04] 2025-07-26 08:27:32,193 | INFO     | -- intersect: 38479955202.148994
[2025-07-26 10:28:04] 2025-07-26 08:27:32,193 | INFO     | current memory leak: -21.94 B/s (using 72 data points, chi2=0.09)
[2025-07-26 10:28:04] 2025-07-26 08:27:32,194 | INFO     | could have reported an average CPU frequency of 3826 MHz (6 samples)
[2025-07-26 10:28:04] 2025-07-26 08:27:32,194 | INFO     | ..............................
[2025-07-26 10:28:04] 2025-07-26 08:27:32,194 | INFO     | . Timing measurements:
[2025-07-26 10:28:04] 2025-07-26 08:27:32,194 | INFO     | . get job = 0 s
[2025-07-26 10:28:04] 2025-07-26 08:27:32,194 | INFO     | . initial setup = 1 s
[2025-07-26 10:28:04] 2025-07-26 08:27:32,194 | INFO     | . payload setup = 5 s
[2025-07-26 10:28:04] 2025-07-26 08:27:32,194 | INFO     | . stage-in = 0 s
[2025-07-26 10:28:04] 2025-07-26 08:27:32,194 | INFO     | . payload execution = 4818 s
[2025-07-26 10:28:04] 2025-07-26 08:27:32,194 | INFO     | . stage-out = 0 s
[2025-07-26 10:28:04] 2025-07-26 08:27:32,194 | INFO     | . log creation = 0 s
[2025-07-26 10:28:04] 2025-07-26 08:27:32,194 | INFO     | ..............................
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | 
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | job summary report
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | --------------------------------------------------
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | PanDA job id: 6744939188
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | task id: 45743349
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | errors: (none)
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | pilot state: finished 
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | transexitcode: 0
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | exeerrorcode: 0
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | exeerrordiag: 
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | exitcode: 0
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | exitmsg: OK
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | cpuconsumptiontime: 18302 s
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | nevents: 400
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | neventsw: 0
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | pid: 73689
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | pgrp: 73689
[2025-07-26 10:28:04] 2025-07-26 08:27:32,236 | INFO     | corecount: 4
[2025-07-26 10:28:04] 2025-07-26 08:27:32,237 | INFO     | event service: False
[2025-07-26 10:28:04] 2025-07-26 08:27:32,237 | INFO     | sizes: {0: 2397476, 4: 2397738, 11: 2397766, 4827: 2424152, 4828: 2433211, 4829: 2433211, 4836: 2433533}
[2025-07-26 10:28:04] 2025-07-26 08:27:32,237 | INFO     | --------------------------------------------------
[2025-07-26 10:28:04] 2025-07-26 08:27:32,237 | INFO     | 
[2025-07-26 10:28:04] 2025-07-26 08:27:32,237 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-26 10:28:04] 2025-07-26 08:27:32,255 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,255 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,255 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | job 6744939188 has completed (purged errors)
[2025-07-26 10:28:04] 2025-07-26 08:27:32,256 | INFO     | overall cleanup function is called
[2025-07-26 10:28:04] 2025-07-26 08:27:33,263 | INFO     | --- collectZombieJob: --- 10, [73689]
[2025-07-26 10:28:04] 2025-07-26 08:27:33,263 | INFO     | zombie collector waiting for pid 73689
[2025-07-26 10:28:04] 2025-07-26 08:27:33,263 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 10:28:04] 2025-07-26 08:27:33,263 | INFO     | collected zombie processes
[2025-07-26 10:28:04] 2025-07-26 08:27:33,263 | INFO     | will attempt to kill all subprocesses of pid=73689
[2025-07-26 10:28:04] 2025-07-26 08:27:33,310 | INFO     | process IDs to be killed: [73689] (in reverse order)
[2025-07-26 10:28:04] 2025-07-26 08:27:33,344 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 10:28:04] 2025-07-26 08:27:33,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 10:28:04] 2025-07-26 08:27:33,346 | INFO     | did not find any defunct processes belonging to 73689
[2025-07-26 10:28:04] 2025-07-26 08:27:33,347 | INFO     | did not find any defunct processes belonging to 73689
[2025-07-26 10:28:04] 2025-07-26 08:27:33,347 | INFO     | ready for new job
[2025-07-26 10:28:04] 2025-07-26 08:27:33,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 10:28:04] 2025-07-26 08:27:33,348 | INFO     | ***************************************
[2025-07-26 10:28:04] 2025-07-26 08:27:33,348 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 10:28:04] 2025-07-26 08:27:33,348 | INFO     | ***************************************
[2025-07-26 10:28:04] 2025-07-26 08:27:33,348 | INFO     | 
[2025-07-26 10:28:04] 2025-07-26 08:27:33,349 | INFO     | architecture information:
[2025-07-26 10:28:04] 2025-07-26 08:27:33,349 | INFO     | executing command: cat /etc/os-release
[2025-07-26 10:28:04] 2025-07-26 08:27:33,363 | INFO     | cat /etc/os-release:
[2025-07-26 10:28:04] NAME="CentOS Linux"
[2025-07-26 10:28:04] VERSION="7 (Core)"
[2025-07-26 10:28:04] ID="centos"
[2025-07-26 10:28:04] ID_LIKE="rhel fedora"
[2025-07-26 10:28:04] VERSION_ID="7"
[2025-07-26 10:28:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 10:28:04] ANSI_COLOR="0;31"
[2025-07-26 10:28:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 10:28:04] HOME_URL="https://www.centos.org/"
[2025-07-26 10:28:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 10:28:04] 
[2025-07-26 10:28:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 10:28:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 10:28:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 10:28:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 10:28:04] 
[2025-07-26 10:28:04] 2025-07-26 08:27:33,363 | INFO     | ***************************************
[2025-07-26 10:28:04] 2025-07-26 08:27:33,867 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-26 10:28:04] 2025-07-26 08:27:33,884 | INFO     | sufficient remaining disk space (338468798464 B)
[2025-07-26 10:28:04] 2025-07-26 08:27:33,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 10:28:04] 2025-07-26 08:27:33,884 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 10:28:04] 2025-07-26 08:27:33,884 | INFO     | update_server=False
[2025-07-26 10:28:04] 2025-07-26 08:27:33,884 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 10:28:04] 2025-07-26 08:27:33,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 10:28:04] 2025-07-26 08:27:33,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 10:28:04] 2025-07-26 08:27:33,885 | INFO     | aborting loop
[2025-07-26 10:28:04] 2025-07-26 08:27:34,062 | INFO     | all job control threads have been joined
[2025-07-26 10:28:04] 2025-07-26 08:27:34,219 | INFO     | all payload control threads have been joined
[2025-07-26 10:28:04] 2025-07-26 08:27:34,698 | INFO     | all data control threads have been joined
[2025-07-26 10:28:04] 2025-07-26 08:27:34,796 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 10:28:04] 2025-07-26 08:27:34,890 | INFO     | [job] retrieve thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:34,890 | INFO     | [job] queue monitor thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:34,891 | INFO     | [job] job monitor thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:35,001 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:35,068 | INFO     | [job] control thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:35,151 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:35,189 | INFO     | [job] validate thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:35,225 | INFO     | [payload] control thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:35,302 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:35,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 10:28:04] 2025-07-26 08:27:35,536 | INFO     | [payload] failed_post thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:35,704 | INFO     | [data] control thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:35,853 | INFO     | [data] copytool_in thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:36,071 | INFO     | [payload] validate_post thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:36,802 | INFO     | [data] copytool_out thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:39,417 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:44,476 | INFO     | job.realtimelogging is not enabled
[2025-07-26 10:28:04] 2025-07-26 08:27:45,482 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 10:28:04] 2025-07-26 08:27:47,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139650173585216)>', '<ExcThread(monitor, started 139648647034624)>']
[2025-07-26 10:28:04] 2025-07-26 08:27:52,428 | INFO     | all workflow threads have been joined
[2025-07-26 10:28:04] 2025-07-26 08:27:52,428 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 10:28:04] 2025-07-26 08:27:52,428 | INFO     | traces error code: 0
[2025-07-26 10:28:04] 2025-07-26 08:27:52,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 10:28:04] 2025-07-26 08:28:04,122 | INFO     | PID=67062 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 10:28:04] 2025-07-26 08:28:04,122 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 10:28:04] 2025-07-26 08:28:04,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 10:28:04] 2025-07-26 08:28:04,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 10:28:04] 2025-07-26 08:28:04,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 10:28:04] 2025-07-26 08:28:04,122 | INFO     | [monitor] control thread has ended
[2025-07-26 10:28:04] 2025-07-26 08:28:04,199 [wrapper] ==== pilot stdout END ====
[2025-07-26 10:28:04] 2025-07-26 08:28:04,203 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 10:28:04] 2025-07-26 08:28:04,208 [wrapper] pilotpid: 67062
[2025-07-26 10:28:04] 2025-07-26 08:28:04,212 [wrapper] Pilot exit status: 0
[2025-07-26 10:28:04] 2025-07-26 08:28:04,224 [wrapper] pandaids: 6744939188
[2025-07-26 10:28:04] 2025-07-26 08:28:04,247 [wrapper] cleanup supervisor_pilot   86007 67063
[2025-07-26 10:28:04] 2025-07-26 08:28:04,251 [wrapper] Test setup, not cleaning
[2025-07-26 10:28:04] 2025-07-26 08:28:04,255 [wrapper] apfmon messages muted
[2025-07-26 10:28:04] 2025-07-26 08:28:04,259 [wrapper] ==== wrapper stdout END ====
[2025-07-26 10:28:04] 2025-07-26 08:28:04,263 [wrapper] ==== wrapper stderr END ====
[2025-07-26 10:28:04]  *** Error codes and diagnostics ***
[2025-07-26 10:28:04]     "exeErrorCode": 0,
[2025-07-26 10:28:04]     "exeErrorDiag": "",
[2025-07-26 10:28:04]     "pilotErrorCode": 0,
[2025-07-26 10:28:04]     "pilotErrorDiag": "",
[2025-07-26 10:28:04]  *** Listing of results directory ***
[2025-07-26 10:28:04] total 347200
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc    530466 Jul 25 01:14 pilot3.tar.gz
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc      5112 Jul 25 01:46 queuedata.json
[2025-07-26 10:28:04] -rwx------ 1 boinc boinc     36292 Jul 25 01:47 runpilot2-wrapper.sh
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc       100 Jul 26 09:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 10:28:04] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 09:06 run_atlas
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc       105 Jul 26 09:06 job.xml
[2025-07-26 10:28:04] -rw-r--r-- 2 boinc boinc 144885129 Jul 26 09:06 EVNT.45743347._000690.pool.root.1
[2025-07-26 10:28:04] -rw-r--r-- 2 boinc boinc    542894 Jul 26 09:06 input.tar.gz
[2025-07-26 10:28:04] -rw-r--r-- 2 boinc boinc     15095 Jul 26 09:06 start_atlas.sh
[2025-07-26 10:28:04] drwxrwx--x 2 boinc boinc      4096 Jul 26 09:06 shared
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc         0 Jul 26 09:06 boinc_setup_complete
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc      6456 Jul 26 09:06 init_data.xml
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc         0 Jul 26 09:06 boinc_lockfile
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc      2562 Jul 26 09:06 pandaJob.out
[2025-07-26 10:28:04] -rw------- 1 boinc boinc    980001 Jul 26 09:06 agis_schedconf.cvmfs.json
[2025-07-26 10:28:04] -rw------- 1 boinc boinc   1593052 Jul 26 09:06 agis_ddmendpoints.agis.ALL.json
[2025-07-26 10:28:04] drwx------ 4 boinc boinc      4096 Jul 26 09:06 pilot3
[2025-07-26 10:28:04] -rw------- 1 boinc boinc 205349199 Jul 26 10:27 HITS.45743349._012813.pool.root.1
[2025-07-26 10:28:04] -rw------- 1 boinc boinc        95 Jul 26 10:27 pilot_heartbeat.json
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc       529 Jul 26 10:27 boinc_task_state.xml
[2025-07-26 10:28:04] -rw------- 1 boinc boinc      1025 Jul 26 10:27 memory_monitor_summary.json
[2025-07-26 10:28:04] -rw------- 1 boinc boinc    233569 Jul 26 10:27 log.45743349._012813.job.log.tgz.1
[2025-07-26 10:28:04] -rw------- 1 boinc boinc      7770 Jul 26 10:27 heartbeat.json
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc      8192 Jul 26 10:27 boinc_mmap_file
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc        27 Jul 26 10:27 wrapper_checkpoint.txt
[2025-07-26 10:28:04] -rw------- 1 boinc boinc       745 Jul 26 10:28 pilotlog.txt
[2025-07-26 10:28:04] -rw------- 1 boinc boinc    472531 Jul 26 10:28 log.45743349._012813.job.log.1
[2025-07-26 10:28:04] -rw------- 1 boinc boinc       357 Jul 26 10:28 output.list
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc       620 Jul 26 10:28 runtime_log
[2025-07-26 10:28:04] -rw------- 1 boinc boinc    727040 Jul 26 10:28 result.tar.gz
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc      8749 Jul 26 10:28 runtime_log.err
[2025-07-26 10:28:04] -rw------- 1 boinc boinc       661 Jul 26 10:28 lbxNDmrpKz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvCOLDmVpyscm.diag
[2025-07-26 10:28:04] -rw-r--r-- 1 boinc boinc     21894 Jul 26 10:28 stderr.txt
[2025-07-26 10:28:04] HITS file was successfully produced:
[2025-07-26 10:28:04] -rw------- 1 boinc boinc 205349199 Jul 26 10:27 shared/HITS.pool.root.1
[2025-07-26 10:28:04]  *** Contents of shared directory: ***
[2025-07-26 10:28:04] total 343300
[2025-07-26 10:28:04] -rw-r--r-- 2 boinc boinc 144885129 Jul 26 09:06 ATLAS.root_0
[2025-07-26 10:28:04] -rw-r--r-- 2 boinc boinc    542894 Jul 26 09:06 input.tar.gz
[2025-07-26 10:28:04] -rw-r--r-- 2 boinc boinc     15095 Jul 26 09:06 start_atlas.sh
[2025-07-26 10:28:04] -rw------- 1 boinc boinc 205349199 Jul 26 10:27 HITS.pool.root.1
[2025-07-26 10:28:04] -rw------- 1 boinc boinc    727040 Jul 26 10:28 result.tar.gz
10:28:05 (63350): run_atlas exited; CPU time 18313.512540
10:28:05 (63350): called boinc_finish(0)

</stderr_txt>
]]>

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