Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:14:35 (1510755): wrapper (7.7.26015): starting
14:14:35 (1510755): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 14:14:35] Arguments: --nthreads 8
[2025-07-25 14:14:35] Threads: 8
[2025-07-25 14:14:35] Checking for CVMFS
[2025-07-25 14:14:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 14:14:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 14:14:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 14:14:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 14:14:36] 2.13.0.0 2191370 15847 305896 148749 1 450 20685092 32935937 22921 16776704 0 81632414 99.507 138237491 18778 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 14:14:36] CVMFS is ok
[2025-07-25 14:14:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 14:14:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 14:14:36] Further information can be found at the LHC@home message board.
[2025-07-25 14:14:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 14:14:36] Checking for apptainer binary...
[2025-07-25 14:14:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 14:14:36] Running /usr/bin/apptainer --version
[2025-07-25 14:14:36] apptainer version 1.4.1-1.el9
[2025-07-25 14:14:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 14:14:36] c7-2-14.aglt2.org
[2025-07-25 14:14:36] apptainer works
[2025-07-25 14:14:36] Set ATHENA_PROC_NUMBER=8
[2025-07-25 14:14:36] Set ATHENA_CORE_NUMBER=8
[2025-07-25 14:14:36] Starting ATLAS job with PandaID=6744936197
[2025-07-25 14:14:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 15:49:18]  *** The last 200 lines of the pilot log: ***
[2025-07-25 15:49:18]  is_tar=False
[2025-07-25 15:49:18]  lfn=log.45743349._011582.job.log.tgz.1
[2025-07-25 15:49:18]  mtime=0
[2025-07-25 15:49:18]  protocol_id=None
[2025-07-25 15:49:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 15:49:18]  replicas=None
[2025-07-25 15:49:18]  scope=mc23_13p6TeV
[2025-07-25 15:49:18]  status=None
[2025-07-25 15:49:18]  status_code=0
[2025-07-25 15:49:18]  storage_token=
[2025-07-25 15:49:18]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6744936197/log.45743349._011582.job.log.tgz.1
[2025-07-25 15:49:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/63/log.45743349._011582.job.log.tgz.1
[2025-07-25 15:49:18]  workdir=None
[2025-07-25 15:49:18] ]
[2025-07-25 15:49:18] 2025-07-25 19:48:38,953 | INFO     | transferring file log.45743349._011582.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6744936197/log.45743349._011582.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 15:49:18] 2025-07-25 19:48:38,953 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6744936197/log.45743349._011582.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._011582.job
[2025-07-25 15:49:18] 2025-07-25 19:48:38,979 | INFO     | adding to output.list: log.45743349._011582.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/63/log.45743349._011582.job.log.tg
[2025-07-25 15:49:18] 2025-07-25 19:48:38,980 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 15:49:18] 2025-07-25 19:48:38,980 | INFO     | summary of transferred files:
[2025-07-25 15:49:18] 2025-07-25 19:48:38,980 | INFO     |  -- lfn=log.45743349._011582.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 15:49:18] 2025-07-25 19:48:38,980 | INFO     | stage-out finished correctly
[2025-07-25 15:49:18] 2025-07-25 19:48:39,059 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 15:49:18] 2025-07-25 19:48:39,218 | INFO     | number of running child processes to parent process 1523226: 1
[2025-07-25 15:49:18] 2025-07-25 19:48:39,218 | INFO     | maximum number of monitored processes: 6
[2025-07-25 15:49:18] 2025-07-25 19:48:39,224 | INFO     | job 6744936197 has state=finished
[2025-07-25 15:49:18] 2025-07-25 19:48:39,224 | INFO     | preparing for final server update for job 6744936197 in state='finished'
[2025-07-25 15:49:18] 2025-07-25 19:48:39,225 | INFO     | this job has now completed (state=finished)
[2025-07-25 15:49:18] 2025-07-25 19:48:39,225 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 15:49:18] 2025-07-25 19:48:39,225 | INFO     | log transfer has been attempted: DONE
[2025-07-25 15:49:18] 2025-07-25 19:48:39,225 | INFO     | job 6744936197 has finished - writing final server update
[2025-07-25 15:49:18] 2025-07-25 19:48:39,235 | INFO     | total number of processed events: 400 (read)
[2025-07-25 15:49:18] 2025-07-25 19:48:39,235 | INFO     | executing command: lscpu
[2025-07-25 15:49:18] 2025-07-25 19:48:39,322 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 15:49:18] 2025-07-25 19:48:41,723 | INFO     | monitor loop #394: job 0:6744936197 is in state 'finished'
[2025-07-25 15:49:18] 2025-07-25 19:48:41,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 15:49:18] 2025-07-25 19:48:44,226 | INFO     | monitor loop #395: job 0:6744936197 is in state 'finished'
[2025-07-25 15:49:18] 2025-07-25 19:48:44,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 15:49:18] 2025-07-25 19:48:45,255 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 15:49:18] 2025-07-25 19:48:45,261 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3089.0195104166673
[2025-07-25 15:49:18] 2025-07-25 19:48:45,275 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6744936197/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 15:49:18] 2025-07-25 19:48:45,276 | INFO     | extracted standard info from prmon json
[2025-07-25 15:49:18] 2025-07-25 19:48:45,276 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 15:49:18] 2025-07-25 19:48:45,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 15:49:18] 2025-07-25 19:48:45,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 15:49:18] 2025-07-25 19:48:45,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 15:49:18] 2025-07-25 19:48:45,278 | INFO     | fitting pss+swap vs Time
[2025-07-25 15:49:18] 2025-07-25 19:48:45,278 | INFO     | sum of square deviations: 190403570.0
[2025-07-25 15:49:18] 2025-07-25 19:48:45,279 | INFO     | sum of deviations: -8002746221.0
[2025-07-25 15:49:18] 2025-07-25 19:48:45,279 | INFO     | mean x: 1753470189.0
[2025-07-25 15:49:18] 2025-07-25 19:48:45,279 | INFO     | mean y: 2269160.5764705883
[2025-07-25 15:49:18] 2025-07-25 19:48:45,279 | INFO     | -- intersect: 73701396381.01624
[2025-07-25 15:49:18] 2025-07-25 19:48:45,279 | INFO     | intersect: 73701396381.01624
[2025-07-25 15:49:18] 2025-07-25 19:48:45,279 | INFO     | chi2: 0.039562958483093394
[2025-07-25 15:49:18] 2025-07-25 19:48:45,279 | INFO     | -- intersect: 73701396381.01624
[2025-07-25 15:49:18] 2025-07-25 19:48:45,279 | INFO     | current memory leak: -42.03 B/s (using 85 data points, chi2=0.04)
[2025-07-25 15:49:18] 2025-07-25 19:48:45,280 | INFO     | could have reported an average CPU frequency of 3088 MHz (7 samples)
[2025-07-25 15:49:18] 2025-07-25 19:48:45,280 | INFO     | ..............................
[2025-07-25 15:49:18] 2025-07-25 19:48:45,280 | INFO     | . Timing measurements:
[2025-07-25 15:49:18] 2025-07-25 19:48:45,280 | INFO     | . get job = 0 s
[2025-07-25 15:49:18] 2025-07-25 19:48:45,280 | INFO     | . initial setup = 2 s
[2025-07-25 15:49:18] 2025-07-25 19:48:45,280 | INFO     | . payload setup = 9 s
[2025-07-25 15:49:18] 2025-07-25 19:48:45,280 | INFO     | . stage-in = 0 s
[2025-07-25 15:49:18] 2025-07-25 19:48:45,280 | INFO     | . payload execution = 5597 s
[2025-07-25 15:49:18] 2025-07-25 19:48:45,280 | INFO     | . stage-out = 1 s
[2025-07-25 15:49:18] 2025-07-25 19:48:45,280 | INFO     | . log creation = 0 s
[2025-07-25 15:49:18] 2025-07-25 19:48:45,280 | INFO     | ..............................
[2025-07-25 15:49:18] 2025-07-25 19:48:45,363 | INFO     | 
[2025-07-25 15:49:18] 2025-07-25 19:48:45,367 | INFO     | job summary report
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | --------------------------------------------------
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | PanDA job id: 6744936197
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | task id: 45743349
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | errors: (none)
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | pilot state: finished 
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | transexitcode: 0
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | exeerrorcode: 0
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | exeerrordiag: 
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | exitcode: 0
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | exitmsg: OK
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | cpuconsumptiontime: 37773 s
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | nevents: 400
[2025-07-25 15:49:18] 2025-07-25 19:48:45,368 | INFO     | neventsw: 0
[2025-07-25 15:49:18] 2025-07-25 19:48:45,369 | INFO     | pid: 1523226
[2025-07-25 15:49:18] 2025-07-25 19:48:45,369 | INFO     | pgrp: 1523226
[2025-07-25 15:49:18] 2025-07-25 19:48:45,369 | INFO     | corecount: 8
[2025-07-25 15:49:18] 2025-07-25 19:48:45,369 | INFO     | event service: False
[2025-07-25 15:49:18] 2025-07-25 19:48:45,369 | INFO     | sizes: {0: 2397422, 5: 2397684, 11: 2397740, 5611: 2424335, 5612: 2433389, 5618: 2433527}
[2025-07-25 15:49:18] 2025-07-25 19:48:45,369 | INFO     | --------------------------------------------------
[2025-07-25 15:49:18] 2025-07-25 19:48:45,369 | INFO     | 
[2025-07-25 15:49:18] 2025-07-25 19:48:45,369 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,416 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 15:49:18] 2025-07-25 19:48:45,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,416 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 15:49:18] 2025-07-25 19:48:45,416 | INFO     | job 6744936197 has completed (purged errors)
[2025-07-25 15:49:18] 2025-07-25 19:48:45,416 | INFO     | overall cleanup function is called
[2025-07-25 15:49:18] 2025-07-25 19:48:46,423 | INFO     | --- collectZombieJob: --- 10, [1523226]
[2025-07-25 15:49:18] 2025-07-25 19:48:46,423 | INFO     | zombie collector waiting for pid 1523226
[2025-07-25 15:49:18] 2025-07-25 19:48:46,423 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 15:49:18] 2025-07-25 19:48:46,423 | INFO     | collected zombie processes
[2025-07-25 15:49:18] 2025-07-25 19:48:46,423 | INFO     | will attempt to kill all subprocesses of pid=1523226
[2025-07-25 15:49:18] 2025-07-25 19:48:46,968 | INFO     | process IDs to be killed: [1523226] (in reverse order)
[2025-07-25 15:49:18] 2025-07-25 19:48:47,144 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 15:49:18] 2025-07-25 19:48:47,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 15:49:18] 2025-07-25 19:48:47,166 | INFO     | did not find any defunct processes belonging to 1523226
[2025-07-25 15:49:18] 2025-07-25 19:48:47,189 | INFO     | did not find any defunct processes belonging to 1523226
[2025-07-25 15:49:18] 2025-07-25 19:48:47,189 | INFO     | ready for new job
[2025-07-25 15:49:18] 2025-07-25 19:48:47,190 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 15:49:18] 2025-07-25 19:48:47,192 | INFO     | ***************************************
[2025-07-25 15:49:18] 2025-07-25 19:48:47,192 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 15:49:18] 2025-07-25 19:48:47,192 | INFO     | ***************************************
[2025-07-25 15:49:18] 2025-07-25 19:48:47,193 | INFO     | 
[2025-07-25 15:49:18] 2025-07-25 19:48:47,211 | INFO     | architecture information:
[2025-07-25 15:49:18] 2025-07-25 19:48:47,211 | INFO     | executing command: cat /etc/os-release
[2025-07-25 15:49:18] 2025-07-25 19:48:47,232 | INFO     | cat /etc/os-release:
[2025-07-25 15:49:18] NAME="CentOS Linux"
[2025-07-25 15:49:18] VERSION="7 (Core)"
[2025-07-25 15:49:18] ID="centos"
[2025-07-25 15:49:18] ID_LIKE="rhel fedora"
[2025-07-25 15:49:18] VERSION_ID="7"
[2025-07-25 15:49:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 15:49:18] ANSI_COLOR="0;31"
[2025-07-25 15:49:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 15:49:18] HOME_URL="https://www.centos.org/"
[2025-07-25 15:49:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 15:49:18] 
[2025-07-25 15:49:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 15:49:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 15:49:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 15:49:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 15:49:18] 
[2025-07-25 15:49:18] 2025-07-25 19:48:47,233 | INFO     | ***************************************
[2025-07-25 15:49:18] 2025-07-25 19:48:47,738 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-25 15:49:18] 2025-07-25 19:48:47,757 | INFO     | sufficient remaining disk space (75613863936 B)
[2025-07-25 15:49:18] 2025-07-25 19:48:47,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 15:49:18] 2025-07-25 19:48:47,757 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 15:49:18] 2025-07-25 19:48:47,757 | INFO     | update_server=False
[2025-07-25 15:49:18] 2025-07-25 19:48:47,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 15:49:18] 2025-07-25 19:48:47,758 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 15:49:18] 2025-07-25 19:48:47,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 15:49:18] 2025-07-25 19:48:47,758 | INFO     | aborting loop
[2025-07-25 15:49:18] 2025-07-25 19:48:47,846 | INFO     | all job control threads have been joined
[2025-07-25 15:49:18] 2025-07-25 19:48:48,100 | INFO     | all payload control threads have been joined
[2025-07-25 15:49:18] 2025-07-25 19:48:48,763 | INFO     | [job] retrieve thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:48,764 | INFO     | [job] job monitor thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:48,799 | INFO     | all data control threads have been joined
[2025-07-25 15:49:18] 2025-07-25 19:48:48,855 | INFO     | [job] control thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:48,872 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:49,105 | INFO     | [payload] control thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:49,298 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:49,535 | INFO     | [payload] failed_post thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:49,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 15:49:18] 2025-07-25 19:48:49,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:49,764 | INFO     | [data] copytool_out thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:49,806 | INFO     | [data] control thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:49,961 | INFO     | [job] validate thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:50,011 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:50,082 | INFO     | [data] copytool_in thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:50,118 | INFO     | [payload] validate_post thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:50,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 15:49:18] 2025-07-25 19:48:51,382 | INFO     | [job] queue monitor thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:53,699 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 15:49:18] 2025-07-25 19:48:54,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140133778876224)>', '<ExcThread(monitor, started 140133298857728)>']
[2025-07-25 15:49:18] 2025-07-25 19:48:59,290 | INFO     | all workflow threads have been joined
[2025-07-25 15:49:18] 2025-07-25 19:48:59,291 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 15:49:18] 2025-07-25 19:48:59,291 | INFO     | traces error code: 0
[2025-07-25 15:49:18] 2025-07-25 19:48:59,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 15:49:18] 2025-07-25 19:49:17,844 | INFO     | PID=1515605 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 15:49:18] 2025-07-25 19:49:17,844 | INFO     | .. there are 34 such processes running
[2025-07-25 15:49:18] 2025-07-25 19:49:17,845 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 15:49:18] 2025-07-25 19:49:17,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 15:49:18] 2025-07-25 19:49:17,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 15:49:18] 2025-07-25 19:49:17,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 15:49:18] 2025-07-25 19:49:17,845 | INFO     | [monitor] control thread has ended
[2025-07-25 15:49:18] 2025-07-25 19:49:18,001 [wrapper] ==== pilot stdout END ====
[2025-07-25 15:49:18] 2025-07-25 19:49:18,004 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 15:49:18] 2025-07-25 19:49:18,007 [wrapper] pilotpid: 1515605
[2025-07-25 15:49:18] 2025-07-25 19:49:18,010 [wrapper] Pilot exit status: 0
[2025-07-25 15:49:18] 2025-07-25 19:49:18,034 [wrapper] pandaids: 6744936197
[2025-07-25 15:49:18] 2025-07-25 19:49:18,156 [wrapper] cleanup supervisor_pilot 1858472 1515606
[2025-07-25 15:49:18] 2025-07-25 19:49:18,161 [wrapper] Test setup, not cleaning
[2025-07-25 15:49:18] 2025-07-25 19:49:18,165 [wrapper] apfmon messages muted
[2025-07-25 15:49:18] 2025-07-25 19:49:18,168 [wrapper] ==== wrapper stdout END ====
[2025-07-25 15:49:18] 2025-07-25 19:49:18,175 [wrapper] ==== wrapper stderr END ====
[2025-07-25 15:49:18]  *** Error codes and diagnostics ***
[2025-07-25 15:49:18]     "exeErrorCode": 0,
[2025-07-25 15:49:18]     "exeErrorDiag": "",
[2025-07-25 15:49:18]     "pilotErrorCode": 0,
[2025-07-25 15:49:18]     "pilotErrorDiag": "",
[2025-07-25 15:49:18]  *** Listing of results directory ***
[2025-07-25 15:49:18] total 440580
[2025-07-25 15:49:18] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 18:20 pilot3.tar.gz
[2025-07-25 15:49:18] -rwx------. 1 boincer umatlas     36292 Jul 24 18:22 runpilot2-wrapper.sh
[2025-07-25 15:49:18] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 18:22 queuedata.json
[2025-07-25 15:49:18] -rw-r--r--. 1 boincer umatlas       100 Jul 25 14:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 15:49:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 14:14 run_atlas
[2025-07-25 15:49:18] -rw-r--r--. 1 boincer umatlas       105 Jul 25 14:14 job.xml
[2025-07-25 15:49:18] -rw-r--r--. 2 boincer umatlas 231316091 Jul 25 14:14 EVNT.45743347._000632.pool.root.1
[2025-07-25 15:49:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 14:14 start_atlas.sh
[2025-07-25 15:49:18] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 14:14 shared
[2025-07-25 15:49:18] -rw-r--r--. 2 boincer umatlas    542885 Jul 25 14:14 input.tar.gz
[2025-07-25 15:49:18] -rw-r--r--. 1 boincer umatlas         0 Jul 25 14:14 boinc_lockfile
[2025-07-25 15:49:18] -rw-r--r--. 1 boincer umatlas      2561 Jul 25 14:14 pandaJob.out
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas    979309 Jul 25 14:14 agis_schedconf.cvmfs.json
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas   1593052 Jul 25 14:14 agis_ddmendpoints.agis.ALL.json
[2025-07-25 15:49:18] drwx------. 4 boincer umatlas      4096 Jul 25 14:14 pilot3
[2025-07-25 15:49:18] -rw-r--r--. 1 boincer umatlas      6933 Jul 25 15:45 init_data.xml
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas 214283698 Jul 25 15:48 HITS.45743349._011582.pool.root.1
[2025-07-25 15:49:18] -rw-r--r--. 1 boincer umatlas       529 Jul 25 15:48 boinc_task_state.xml
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas        95 Jul 25 15:48 pilot_heartbeat.json
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas      1045 Jul 25 15:48 memory_monitor_summary.json
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas    304680 Jul 25 15:48 log.45743349._011582.job.log.tgz.1
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas      7773 Jul 25 15:48 heartbeat.json
[2025-07-25 15:49:18] -rw-r--r--. 1 boincer umatlas        27 Jul 25 15:49 wrapper_checkpoint.txt
[2025-07-25 15:49:18] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 15:49 boinc_mmap_file
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas       823 Jul 25 15:49 pilotlog.txt
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas    535266 Jul 25 15:49 log.45743349._011582.job.log.1
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas       357 Jul 25 15:49 output.list
[2025-07-25 15:49:18] -rw-r--r--. 1 boincer umatlas       620 Jul 25 15:49 runtime_log
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas    860160 Jul 25 15:49 result.tar.gz
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas       652 Jul 25 15:49 wDwKDmBWJz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2yNLDmVAt1Hn.diag
[2025-07-25 15:49:18] -rw-r--r--. 1 boincer umatlas      8655 Jul 25 15:49 runtime_log.err
[2025-07-25 15:49:18] -rw-r--r--. 1 boincer umatlas     21548 Jul 25 15:49 stderr.txt
[2025-07-25 15:49:18] HITS file was successfully produced:
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas 214283698 Jul 25 15:48 shared/HITS.pool.root.1
[2025-07-25 15:49:18]  *** Contents of shared directory: ***
[2025-07-25 15:49:18] total 436552
[2025-07-25 15:49:18] -rw-r--r--. 2 boincer umatlas 231316091 Jul 25 14:14 ATLAS.root_0
[2025-07-25 15:49:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 14:14 start_atlas.sh
[2025-07-25 15:49:18] -rw-r--r--. 2 boincer umatlas    542885 Jul 25 14:14 input.tar.gz
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas 214283698 Jul 25 15:48 HITS.pool.root.1
[2025-07-25 15:49:18] -rw-------. 1 boincer umatlas    860160 Jul 25 15:49 result.tar.gz
15:49:20 (1510755): run_atlas exited; CPU time 37974.199266
15:49:20 (1510755): called boinc_finish(0)

</stderr_txt>
]]>

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