Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:06:22 (672934): wrapper (7.7.26015): starting
16:06:22 (672934): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 16:06:22] Arguments: --nthreads 12
[2025-07-25 16:06:22] Threads: 12
[2025-07-25 16:06:22] Checking for CVMFS
[2025-07-25 16:06:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 16:06:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 16:06:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 16:06:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 16:06:22] 2.12.6.0 1364387 15944 345760 148751 2 648 21341366 32935937 13005 16776704 0 43743770 99.754 69477436 31787 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 16:06:22] CVMFS is ok
[2025-07-25 16:06:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 16:06:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 16:06:22] Further information can be found at the LHC@home message board.
[2025-07-25 16:06:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 16:06:22] Checking for apptainer binary...
[2025-07-25 16:06:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 16:06:22] Running /usr/bin/apptainer --version
[2025-07-25 16:06:22] apptainer version 1.4.1-1.el9
[2025-07-25 16:06:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 16:06:22] c6-2-29-2.aglt2.org
[2025-07-25 16:06:22] apptainer works
[2025-07-25 16:06:22] Set ATHENA_PROC_NUMBER=12
[2025-07-25 16:06:22] Set ATHENA_CORE_NUMBER=12
[2025-07-25 16:06:22] Starting ATLAS job with PandaID=6745015239
[2025-07-25 16:06:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 18:38:29]  *** The last 200 lines of the pilot log: ***
[2025-07-25 18:38:29] 2025-07-25 22:37:55,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 18:38:29] 2025-07-25 22:37:55,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 18:38:29] 2025-07-25 22:37:55,297 | INFO     | fitting pss+swap vs Time
[2025-07-25 18:38:29] 2025-07-25 22:37:55,297 | INFO     | sum of square deviations: 1025797631.1140915
[2025-07-25 18:38:29] 2025-07-25 22:37:55,298 | INFO     | sum of deviations: 8801693406.174494
[2025-07-25 18:38:29] 2025-07-25 22:37:55,298 | INFO     | mean x: 1753478531.4697986
[2025-07-25 18:38:29] 2025-07-25 22:37:55,298 | INFO     | mean y: 2343334.4832214764
[2025-07-25 18:38:29] 2025-07-25 22:37:55,298 | INFO     | -- intersect: -15043100289.269604
[2025-07-25 18:38:29] 2025-07-25 22:37:55,298 | INFO     | intersect: -15043100289.269604
[2025-07-25 18:38:29] 2025-07-25 22:37:55,298 | INFO     | chi2: 2.043171134047239
[2025-07-25 18:38:29] 2025-07-25 22:37:55,307 | INFO     | sum of square deviations: 925975704.9375019
[2025-07-25 18:38:29] 2025-07-25 22:37:55,308 | INFO     | sum of deviations: 18052638198.66667
[2025-07-25 18:38:29] 2025-07-25 22:37:55,308 | INFO     | mean x: 1753478378.9791667
[2025-07-25 18:38:29] 2025-07-25 22:37:55,308 | INFO     | mean y: 2357085.222222222
[2025-07-25 18:38:29] 2025-07-25 22:37:55,308 | INFO     | -- intersect: -34183108684.672844
[2025-07-25 18:38:29] 2025-07-25 22:37:55,308 | INFO     | intersect: -34183108684.672844
[2025-07-25 18:38:29] 2025-07-25 22:37:55,308 | INFO     | chi2: 1.3576742290782808
[2025-07-25 18:38:29] 2025-07-25 22:37:55,308 | INFO     | current chi2=1.3576742290782808 (change=33.550635751743606 %)
[2025-07-25 18:38:29] 2025-07-25 22:37:55,309 | INFO     | sum of square deviations: 832824738.6043168
[2025-07-25 18:38:29] 2025-07-25 22:37:55,309 | INFO     | sum of deviations: 17520317925.697845
[2025-07-25 18:38:29] 2025-07-25 22:37:55,309 | INFO     | mean x: 1753478226.4676259
[2025-07-25 18:38:29] 2025-07-25 22:37:55,309 | INFO     | mean y: 2356196.2661870504
[2025-07-25 18:38:29] 2025-07-25 22:37:55,309 | INFO     | -- intersect: -36885952447.14179
[2025-07-25 18:38:29] 2025-07-25 22:37:55,310 | INFO     | intersect: -36885952447.14179
[2025-07-25 18:38:29] 2025-07-25 22:37:55,310 | INFO     | chi2: 1.3578034341388752
[2025-07-25 18:38:29] 2025-07-25 22:37:55,310 | INFO     | current chi2=1.3578034341388752 (change=-0.009516646764522092 %)
[2025-07-25 18:38:29] 2025-07-25 22:37:55,310 | INFO     | right removable region: 138
[2025-07-25 18:38:29] 2025-07-25 22:37:55,310 | INFO     | sum of square deviations: 925941849.97222
[2025-07-25 18:38:29] 2025-07-25 22:37:55,327 | INFO     | sum of deviations: -10784339302.76389
[2025-07-25 18:38:29] 2025-07-25 22:37:55,327 | INFO     | mean x: 1753478683.9861112
[2025-07-25 18:38:29] 2025-07-25 22:37:55,328 | INFO     | mean y: 2372840.1180555555
[2025-07-25 18:38:29] 2025-07-25 22:37:55,328 | INFO     | -- intersect: 20424939428.76232
[2025-07-25 18:38:29] 2025-07-25 22:37:55,328 | INFO     | intersect: 20424939428.76232
[2025-07-25 18:38:29] 2025-07-25 22:37:55,328 | INFO     | chi2: 0.8075186459839399
[2025-07-25 18:38:29] 2025-07-25 22:37:55,328 | INFO     | current chi2=0.8075186459839399 (change=60.4771899657589 %)
[2025-07-25 18:38:29] 2025-07-25 22:37:55,328 | INFO     | sum of square deviations: 832792408.7482023
[2025-07-25 18:38:29] 2025-07-25 22:37:55,329 | INFO     | sum of deviations: -4157830783.568347
[2025-07-25 18:38:29] 2025-07-25 22:37:55,329 | INFO     | mean x: 1753478836.496403
[2025-07-25 18:38:29] 2025-07-25 22:37:55,329 | INFO     | mean y: 2361951.8633093527
[2025-07-25 18:38:29] 2025-07-25 22:37:55,329 | INFO     | -- intersect: 8756846512.642624
[2025-07-25 18:38:29] 2025-07-25 22:37:55,329 | INFO     | intersect: 8756846512.642624
[2025-07-25 18:38:29] 2025-07-25 22:37:55,329 | INFO     | chi2: 0.7319913224957312
[2025-07-25 18:38:29] 2025-07-25 22:37:55,329 | INFO     | current chi2=0.7319913224957312 (change=9.353012944509864 %)
[2025-07-25 18:38:29] 2025-07-25 22:37:55,329 | INFO     | left removable region: 20
[2025-07-25 18:38:29] 2025-07-25 22:37:55,329 | INFO     | sum of square deviations: 509506646.99152595
[2025-07-25 18:38:29] 2025-07-25 22:37:55,330 | INFO     | sum of deviations: 2315345333.533897
[2025-07-25 18:38:29] 2025-07-25 22:37:55,330 | INFO     | mean x: 1753478805.9915254
[2025-07-25 18:38:29] 2025-07-25 22:37:55,330 | INFO     | mean y: 2382284.533898305
[2025-07-25 18:38:29] 2025-07-25 22:37:55,330 | INFO     | -- intersect: -7965931759.798072
[2025-07-25 18:38:29] 2025-07-25 22:37:55,330 | INFO     | intersect: -7965931759.798072
[2025-07-25 18:38:29] 2025-07-25 22:37:55,330 | INFO     | chi2: 0.013908285813943088
[2025-07-25 18:38:29] 2025-07-25 22:37:55,330 | INFO     | -- intersect: -7965931759.798072
[2025-07-25 18:38:29] 2025-07-25 22:37:55,331 | INFO     | current memory leak: 4.54 B/s (using 118 data points, chi2=0.01)
[2025-07-25 18:38:29] 2025-07-25 22:37:55,331 | INFO     | could have reported an average CPU frequency of 2872 MHz (8 samples)
[2025-07-25 18:38:29] 2025-07-25 22:37:55,331 | INFO     | ..............................
[2025-07-25 18:38:29] 2025-07-25 22:37:55,331 | INFO     | . Timing measurements:
[2025-07-25 18:38:29] 2025-07-25 22:37:55,331 | INFO     | . get job = 0 s
[2025-07-25 18:38:29] 2025-07-25 22:37:55,331 | INFO     | . initial setup = 2 s
[2025-07-25 18:38:29] 2025-07-25 22:37:55,332 | INFO     | . payload setup = 5 s
[2025-07-25 18:38:29] 2025-07-25 22:37:55,332 | INFO     | . stage-in = 0 s
[2025-07-25 18:38:29] 2025-07-25 22:37:55,332 | INFO     | . payload execution = 9048 s
[2025-07-25 18:38:29] 2025-07-25 22:37:55,332 | INFO     | . stage-out = 1 s
[2025-07-25 18:38:29] 2025-07-25 22:37:55,332 | INFO     | . log creation = 0 s
[2025-07-25 18:38:29] 2025-07-25 22:37:55,332 | INFO     | ..............................
[2025-07-25 18:38:29] 2025-07-25 22:37:55,721 | INFO     | PID=676543 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 18:38:29] 2025-07-25 22:37:55,722 | INFO     | .. there are 20 such processes running
[2025-07-25 18:38:29] 2025-07-25 22:37:55,985 | INFO     | 
[2025-07-25 18:38:29] 2025-07-25 22:37:55,985 | INFO     | job summary report
[2025-07-25 18:38:29] 2025-07-25 22:37:55,985 | INFO     | --------------------------------------------------
[2025-07-25 18:38:29] 2025-07-25 22:37:55,985 | INFO     | PanDA job id: 6745015239
[2025-07-25 18:38:29] 2025-07-25 22:37:55,985 | INFO     | task id: 45743349
[2025-07-25 18:38:29] 2025-07-25 22:37:55,985 | INFO     | errors: (none)
[2025-07-25 18:38:29] 2025-07-25 22:37:55,986 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 18:38:29] 2025-07-25 22:37:55,986 | INFO     | pilot state: finished 
[2025-07-25 18:38:29] 2025-07-25 22:37:55,986 | INFO     | transexitcode: 0
[2025-07-25 18:38:29] 2025-07-25 22:37:55,986 | INFO     | exeerrorcode: 0
[2025-07-25 18:38:29] 2025-07-25 22:37:55,986 | INFO     | exeerrordiag: 
[2025-07-25 18:38:29] 2025-07-25 22:37:55,986 | INFO     | exitcode: 0
[2025-07-25 18:38:29] 2025-07-25 22:37:55,986 | INFO     | exitmsg: OK
[2025-07-25 18:38:29] 2025-07-25 22:37:55,986 | INFO     | cpuconsumptiontime: 46331 s
[2025-07-25 18:38:29] 2025-07-25 22:37:55,986 | INFO     | nevents: 400
[2025-07-25 18:38:29] 2025-07-25 22:37:55,987 | INFO     | neventsw: 0
[2025-07-25 18:38:29] 2025-07-25 22:37:55,987 | INFO     | pid: 683957
[2025-07-25 18:38:29] 2025-07-25 22:37:55,987 | INFO     | pgrp: 683957
[2025-07-25 18:38:29] 2025-07-25 22:37:55,987 | INFO     | corecount: 12
[2025-07-25 18:38:29] 2025-07-25 22:37:55,987 | INFO     | event service: False
[2025-07-25 18:38:29] 2025-07-25 22:37:55,987 | INFO     | sizes: {0: 2397473, 4: 2397735, 11: 2397763, 9055: 2426140, 9056: 2426139, 9058: 2435193, 9060: 2435377, 9070: 2435571}
[2025-07-25 18:38:29] 2025-07-25 22:37:55,987 | INFO     | --------------------------------------------------
[2025-07-25 18:38:29] 2025-07-25 22:37:55,987 | INFO     | 
[2025-07-25 18:38:29] 2025-07-25 22:37:55,987 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 18:38:29] 2025-07-25 22:37:56,071 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,071 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,071 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,072 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,073 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 18:38:29] 2025-07-25 22:37:56,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,073 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 18:38:29] 2025-07-25 22:37:56,073 | INFO     | job 6745015239 has completed (purged errors)
[2025-07-25 18:38:29] 2025-07-25 22:37:56,073 | INFO     | overall cleanup function is called
[2025-07-25 18:38:29] 2025-07-25 22:37:57,083 | INFO     | --- collectZombieJob: --- 10, [683957]
[2025-07-25 18:38:29] 2025-07-25 22:37:57,083 | INFO     | zombie collector waiting for pid 683957
[2025-07-25 18:38:29] 2025-07-25 22:37:57,083 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 18:38:29] 2025-07-25 22:37:57,083 | INFO     | collected zombie processes
[2025-07-25 18:38:29] 2025-07-25 22:37:57,083 | INFO     | will attempt to kill all subprocesses of pid=683957
[2025-07-25 18:38:29] 2025-07-25 22:37:57,699 | INFO     | process IDs to be killed: [683957] (in reverse order)
[2025-07-25 18:38:29] 2025-07-25 22:37:57,806 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 18:38:29] 2025-07-25 22:37:57,806 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 18:38:29] 2025-07-25 22:37:57,823 | INFO     | did not find any defunct processes belonging to 683957
[2025-07-25 18:38:29] 2025-07-25 22:37:57,849 | INFO     | did not find any defunct processes belonging to 683957
[2025-07-25 18:38:29] 2025-07-25 22:37:57,856 | INFO     | ready for new job
[2025-07-25 18:38:29] 2025-07-25 22:37:57,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 18:38:29] 2025-07-25 22:37:57,858 | INFO     | ***************************************
[2025-07-25 18:38:29] 2025-07-25 22:37:57,859 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 18:38:29] 2025-07-25 22:37:57,859 | INFO     | ***************************************
[2025-07-25 18:38:29] 2025-07-25 22:37:57,859 | INFO     | 
[2025-07-25 18:38:29] 2025-07-25 22:37:57,880 | INFO     | architecture information:
[2025-07-25 18:38:29] 2025-07-25 22:37:57,884 | INFO     | executing command: cat /etc/os-release
[2025-07-25 18:38:29] 2025-07-25 22:37:57,921 | INFO     | cat /etc/os-release:
[2025-07-25 18:38:29] NAME="CentOS Linux"
[2025-07-25 18:38:29] VERSION="7 (Core)"
[2025-07-25 18:38:29] ID="centos"
[2025-07-25 18:38:29] ID_LIKE="rhel fedora"
[2025-07-25 18:38:29] VERSION_ID="7"
[2025-07-25 18:38:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 18:38:29] ANSI_COLOR="0;31"
[2025-07-25 18:38:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 18:38:29] HOME_URL="https://www.centos.org/"
[2025-07-25 18:38:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 18:38:29] 
[2025-07-25 18:38:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 18:38:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 18:38:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 18:38:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 18:38:29] 
[2025-07-25 18:38:29] 2025-07-25 22:37:57,921 | INFO     | ***************************************
[2025-07-25 18:38:29] 2025-07-25 22:37:58,426 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 18:38:29] 2025-07-25 22:37:58,534 | INFO     | sufficient remaining disk space (76459016192 B)
[2025-07-25 18:38:29] 2025-07-25 22:37:58,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 18:38:29] 2025-07-25 22:37:58,535 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 18:38:29] 2025-07-25 22:37:58,535 | INFO     | update_server=False
[2025-07-25 18:38:29] 2025-07-25 22:37:58,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 18:38:29] 2025-07-25 22:37:58,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 18:38:29] 2025-07-25 22:37:58,536 | INFO     | aborting loop
[2025-07-25 18:38:29] 2025-07-25 22:37:58,871 | INFO     | all data control threads have been joined
[2025-07-25 18:38:29] 2025-07-25 22:37:59,177 | INFO     | all job control threads have been joined
[2025-07-25 18:38:29] 2025-07-25 22:37:59,348 | INFO     | all payload control threads have been joined
[2025-07-25 18:38:29] 2025-07-25 22:37:59,541 | INFO     | [job] retrieve thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:37:59,542 | INFO     | [job] job monitor thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:37:59,571 | INFO     | [job] validate thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:37:59,645 | INFO     | [data] copytool_in thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:37:59,877 | INFO     | [data] control thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:37:59,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 18:38:29] 2025-07-25 22:38:00,068 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:38:00,183 | INFO     | [job] control thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:38:00,354 | INFO     | [payload] control thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:38:00,483 | INFO     | [payload] failed_post thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:38:00,549 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:38:00,552 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:38:00,554 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:38:00,592 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 18:38:29] 2025-07-25 22:38:00,648 | INFO     | [payload] validate_post thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:38:00,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 18:38:29] 2025-07-25 22:38:01,598 | INFO     | [job] queue monitor thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:38:01,897 | INFO     | [data] copytool_out thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:38:04,722 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 18:38:29] 2025-07-25 22:38:04,809 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140646609012544)>', '<ExcThread(monitor, started 140646237050624)>']
[2025-07-25 18:38:29] 2025-07-25 22:38:09,835 | INFO     | all workflow threads have been joined
[2025-07-25 18:38:29] 2025-07-25 22:38:09,836 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 18:38:29] 2025-07-25 22:38:09,836 | INFO     | traces error code: 0
[2025-07-25 18:38:29] 2025-07-25 22:38:09,836 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 18:38:29] 2025-07-25 22:38:28,519 | INFO     | PID=676543 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-25 18:38:29] 2025-07-25 22:38:28,519 | INFO     | .. there are 20 such processes running
[2025-07-25 18:38:29] 2025-07-25 22:38:28,520 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 18:38:29] 2025-07-25 22:38:28,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 18:38:29] 2025-07-25 22:38:28,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 18:38:29] 2025-07-25 22:38:28,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 18:38:29] 2025-07-25 22:38:28,520 | INFO     | [monitor] control thread has ended
[2025-07-25 18:38:29] 2025-07-25 22:38:28,866 [wrapper] ==== pilot stdout END ====
[2025-07-25 18:38:29] 2025-07-25 22:38:28,869 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 18:38:29] 2025-07-25 22:38:28,871 [wrapper] pilotpid: 676543
[2025-07-25 18:38:29] 2025-07-25 22:38:28,874 [wrapper] Pilot exit status: 0
[2025-07-25 18:38:29] 2025-07-25 22:38:28,888 [wrapper] pandaids: 6745015239
[2025-07-25 18:38:29] 2025-07-25 22:38:28,960 [wrapper] cleanup supervisor_pilot 1181434 676544
[2025-07-25 18:38:29] 2025-07-25 22:38:28,963 [wrapper] Test setup, not cleaning
[2025-07-25 18:38:29] 2025-07-25 22:38:28,966 [wrapper] apfmon messages muted
[2025-07-25 18:38:29] 2025-07-25 22:38:28,969 [wrapper] ==== wrapper stdout END ====
[2025-07-25 18:38:29] 2025-07-25 22:38:28,972 [wrapper] ==== wrapper stderr END ====
[2025-07-25 18:38:29]  *** Error codes and diagnostics ***
[2025-07-25 18:38:29]     "exeErrorCode": 0,
[2025-07-25 18:38:29]     "exeErrorDiag": "",
[2025-07-25 18:38:29]     "pilotErrorCode": 0,
[2025-07-25 18:38:29]     "pilotErrorDiag": "",
[2025-07-25 18:38:29]  *** Listing of results directory ***
[2025-07-25 18:38:29] total 350036
[2025-07-25 18:38:29] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 06:49 pilot3.tar.gz
[2025-07-25 18:38:29] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 06:57 queuedata.json
[2025-07-25 18:38:29] -rwx------. 1 boincer umatlas     36292 Jul 25 06:58 runpilot2-wrapper.sh
[2025-07-25 18:38:29] -rw-r--r--. 1 boincer umatlas       100 Jul 25 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 18:38:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 16:06 run_atlas
[2025-07-25 18:38:29] -rw-r--r--. 1 boincer umatlas       105 Jul 25 16:06 job.xml
[2025-07-25 18:38:29] -rw-r--r--. 2 boincer umatlas 144340720 Jul 25 16:06 EVNT.45743347._001061.pool.root.1
[2025-07-25 18:38:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 16:06 start_atlas.sh
[2025-07-25 18:38:29] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 16:06 shared
[2025-07-25 18:38:29] -rw-r--r--. 2 boincer umatlas    542891 Jul 25 16:06 input.tar.gz
[2025-07-25 18:38:29] -rw-r--r--. 1 boincer umatlas         0 Jul 25 16:06 boinc_lockfile
[2025-07-25 18:38:29] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 16:06 pandaJob.out
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas    979993 Jul 25 16:06 agis_schedconf.cvmfs.json
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas   1593052 Jul 25 16:06 agis_ddmendpoints.agis.ALL.json
[2025-07-25 18:38:29] drwx------. 4 boincer umatlas      4096 Jul 25 16:06 pilot3
[2025-07-25 18:38:29] -rw-r--r--. 1 boincer umatlas      6841 Jul 25 18:28 init_data.xml
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas 207945018 Jul 25 18:37 HITS.45743349._020157.pool.root.1
[2025-07-25 18:38:29] -rw-r--r--. 1 boincer umatlas       530 Jul 25 18:37 boinc_task_state.xml
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas      1040 Jul 25 18:37 memory_monitor_summary.json
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas        95 Jul 25 18:37 pilot_heartbeat.json
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas    398077 Jul 25 18:37 log.45743349._020157.job.log.tgz.1
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas      7815 Jul 25 18:37 heartbeat.json
[2025-07-25 18:38:29] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 18:38 boinc_mmap_file
[2025-07-25 18:38:29] -rw-r--r--. 1 boincer umatlas        27 Jul 25 18:38 wrapper_checkpoint.txt
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas       822 Jul 25 18:38 pilotlog.txt
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas    739979 Jul 25 18:38 log.45743349._020157.job.log.1
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas       357 Jul 25 18:38 output.list
[2025-07-25 18:38:29] -rw-r--r--. 1 boincer umatlas       620 Jul 25 18:38 runtime_log
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas   1157120 Jul 25 18:38 result.tar.gz
[2025-07-25 18:38:29] -rw-r--r--. 1 boincer umatlas      8667 Jul 25 18:38 runtime_log.err
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas       655 Jul 25 18:38 BCoLDmGJVz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDNPLDmkNN12m.diag
[2025-07-25 18:38:29] -rw-r--r--. 1 boincer umatlas     21107 Jul 25 18:38 stderr.txt
[2025-07-25 18:38:29] HITS file was successfully produced:
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas 207945018 Jul 25 18:37 shared/HITS.pool.root.1
[2025-07-25 18:38:29]  *** Contents of shared directory: ***
[2025-07-25 18:38:29] total 345716
[2025-07-25 18:38:29] -rw-r--r--. 2 boincer umatlas 144340720 Jul 25 16:06 ATLAS.root_0
[2025-07-25 18:38:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 16:06 start_atlas.sh
[2025-07-25 18:38:29] -rw-r--r--. 2 boincer umatlas    542891 Jul 25 16:06 input.tar.gz
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas 207945018 Jul 25 18:37 HITS.pool.root.1
[2025-07-25 18:38:29] -rw-------. 1 boincer umatlas   1157120 Jul 25 18:38 result.tar.gz
18:38:30 (672934): run_atlas exited; CPU time 46577.381748
18:38:30 (672934): called boinc_finish(0)

</stderr_txt>
]]>

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