Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:50:24 (1166514): wrapper (7.7.26015): starting
12:50:24 (1166514): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 12:50:24] Arguments: --nthreads 8
[2025-07-25 12:50:24] Threads: 8
[2025-07-25 12:50:24] Checking for CVMFS
[2025-07-25 12:50:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 12:50:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 12:50:24] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 12:50:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 12:50:25] 2.13.0.0 2191370 15762 311472 148747 1 604 30053671 32935937 23327 16776704 0 81140151 99.513 135647975 18731 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 12:50:25] CVMFS is ok
[2025-07-25 12:50:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 12:50:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 12:50:25] Further information can be found at the LHC@home message board.
[2025-07-25 12:50:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 12:50:25] Checking for apptainer binary...
[2025-07-25 12:50:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 12:50:25] Running /usr/bin/apptainer --version
[2025-07-25 12:50:25] apptainer version 1.4.1-1.el9
[2025-07-25 12:50:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 12:50:25] c7-2-14.aglt2.org
[2025-07-25 12:50:25] apptainer works
[2025-07-25 12:50:25] Set ATHENA_PROC_NUMBER=8
[2025-07-25 12:50:25] Set ATHENA_CORE_NUMBER=8
[2025-07-25 12:50:25] Starting ATLAS job with PandaID=6745014784
[2025-07-25 12:50:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 14:32:16]  *** The last 200 lines of the pilot log: ***
[2025-07-25 14:32:16] ]
[2025-07-25 14:32:16] 2025-07-25 18:31:22,716 | INFO     | transferring file log.45743349._019931.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6745014784/log.45743349._019931.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 14:32:16] 2025-07-25 18:31:22,716 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6745014784/log.45743349._019931.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._019931.job
[2025-07-25 14:32:16] 2025-07-25 18:31:22,787 | INFO     | adding to output.list: log.45743349._019931.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/c8/log.45743349._019931.job.log.tg
[2025-07-25 14:32:16] 2025-07-25 18:31:22,788 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 14:32:16] 2025-07-25 18:31:22,788 | INFO     | summary of transferred files:
[2025-07-25 14:32:16] 2025-07-25 18:31:22,788 | INFO     |  -- lfn=log.45743349._019931.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 14:32:16] 2025-07-25 18:31:22,788 | INFO     | stage-out finished correctly
[2025-07-25 14:32:16] 2025-07-25 18:31:23,286 | INFO     | monitor loop #425: job 0:6745014784 is in state 'finished'
[2025-07-25 14:32:16] 2025-07-25 18:31:23,286 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 14:32:16] 2025-07-25 18:31:25,800 | INFO     | monitor loop #426: job 0:6745014784 is in state 'finished'
[2025-07-25 14:32:16] 2025-07-25 18:31:25,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 14:32:16] 2025-07-25 18:31:26,118 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 14:32:16] 2025-07-25 18:31:28,304 | INFO     | monitor loop #427: job 0:6745014784 is in state 'finished'
[2025-07-25 14:32:16] 2025-07-25 18:31:28,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 14:32:16] 2025-07-25 18:31:28,750 | INFO     | job 6745014784 has state=finished
[2025-07-25 14:32:16] 2025-07-25 18:31:28,751 | INFO     | preparing for final server update for job 6745014784 in state='finished'
[2025-07-25 14:32:16] 2025-07-25 18:31:28,751 | INFO     | this job has now completed (state=finished)
[2025-07-25 14:32:16] 2025-07-25 18:31:28,751 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 14:32:16] 2025-07-25 18:31:28,751 | INFO     | log transfer has been attempted: DONE
[2025-07-25 14:32:16] 2025-07-25 18:31:28,752 | INFO     | job 6745014784 has finished - writing final server update
[2025-07-25 14:32:16] 2025-07-25 18:31:28,752 | INFO     | total number of processed events: 400 (read)
[2025-07-25 14:32:16] 2025-07-25 18:31:28,760 | INFO     | executing command: lscpu
[2025-07-25 14:32:16] 2025-07-25 18:31:28,928 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 14:32:16] 2025-07-25 18:31:30,811 | INFO     | monitor loop #428: job 0:6745014784 is in state 'finished'
[2025-07-25 14:32:16] 2025-07-25 18:31:30,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 14:32:16] 2025-07-25 18:31:33,316 | INFO     | monitor loop #429: job 0:6745014784 is in state 'finished'
[2025-07-25 14:32:16] 2025-07-25 18:31:33,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 14:32:16] 2025-07-25 18:31:35,811 | INFO     | PID=1170092 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-25 14:32:16] 2025-07-25 18:31:35,811 | INFO     | .. there are 28 such processes running
[2025-07-25 14:32:16] 2025-07-25 18:31:35,821 | INFO     | monitor loop #430: job 0:6745014784 is in state 'finished'
[2025-07-25 14:32:16] 2025-07-25 18:31:35,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 14:32:16] 2025-07-25 18:31:38,328 | INFO     | monitor loop #431: job 0:6745014784 is in state 'finished'
[2025-07-25 14:32:16] 2025-07-25 18:31:38,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 14:32:16] 2025-07-25 18:31:40,832 | INFO     | monitor loop #432: job 0:6745014784 is in state 'finished'
[2025-07-25 14:32:16] 2025-07-25 18:31:40,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 14:32:16] 2025-07-25 18:31:41,472 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 14:32:16] 2025-07-25 18:31:41,481 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3038.2585312500014
[2025-07-25 14:32:16] 2025-07-25 18:31:41,501 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745014784/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 14:32:16] 2025-07-25 18:31:41,501 | INFO     | extracted standard info from prmon json
[2025-07-25 14:32:16] 2025-07-25 18:31:41,502 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 14:32:16] 2025-07-25 18:31:41,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 14:32:16] 2025-07-25 18:31:41,502 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 14:32:16] 2025-07-25 18:31:41,502 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 14:32:16] 2025-07-25 18:31:41,504 | INFO     | fitting pss+swap vs Time
[2025-07-25 14:32:16] 2025-07-25 18:31:41,504 | INFO     | sum of square deviations: 233641590.0
[2025-07-25 14:32:16] 2025-07-25 18:31:41,505 | INFO     | sum of deviations: -12450358334.999992
[2025-07-25 14:32:16] 2025-07-25 18:31:41,505 | INFO     | mean x: 1753465366.0
[2025-07-25 14:32:16] 2025-07-25 18:31:41,505 | INFO     | mean y: 2215225.164835165
[2025-07-25 14:32:16] 2025-07-25 18:31:41,505 | INFO     | -- intersect: 93441367623.98183
[2025-07-25 14:32:16] 2025-07-25 18:31:41,505 | INFO     | intersect: 93441367623.98183
[2025-07-25 14:32:16] 2025-07-25 18:31:41,505 | INFO     | chi2: 0.22183412345214334
[2025-07-25 14:32:16] 2025-07-25 18:31:41,505 | INFO     | -- intersect: 93441367623.98183
[2025-07-25 14:32:16] 2025-07-25 18:31:41,505 | INFO     | current memory leak: -53.29 B/s (using 91 data points, chi2=0.22)
[2025-07-25 14:32:16] 2025-07-25 18:31:41,506 | INFO     | could have reported an average CPU frequency of 3154 MHz (7 samples)
[2025-07-25 14:32:16] 2025-07-25 18:31:41,506 | INFO     | ..............................
[2025-07-25 14:32:16] 2025-07-25 18:31:41,506 | INFO     | . Timing measurements:
[2025-07-25 14:32:16] 2025-07-25 18:31:41,506 | INFO     | . get job = 0 s
[2025-07-25 14:32:16] 2025-07-25 18:31:41,506 | INFO     | . initial setup = 3 s
[2025-07-25 14:32:16] 2025-07-25 18:31:41,506 | INFO     | . payload setup = 19 s
[2025-07-25 14:32:16] 2025-07-25 18:31:41,506 | INFO     | . stage-in = 0 s
[2025-07-25 14:32:16] 2025-07-25 18:31:41,506 | INFO     | . payload execution = 5973 s
[2025-07-25 14:32:16] 2025-07-25 18:31:41,506 | INFO     | . stage-out = 1 s
[2025-07-25 14:32:16] 2025-07-25 18:31:41,507 | INFO     | . log creation = 0 s
[2025-07-25 14:32:16] 2025-07-25 18:31:41,507 | INFO     | ..............................
[2025-07-25 14:32:16] 2025-07-25 18:31:42,113 | INFO     | 
[2025-07-25 14:32:16] 2025-07-25 18:31:42,114 | INFO     | job summary report
[2025-07-25 14:32:16] 2025-07-25 18:31:42,114 | INFO     | --------------------------------------------------
[2025-07-25 14:32:16] 2025-07-25 18:31:42,114 | INFO     | PanDA job id: 6745014784
[2025-07-25 14:32:16] 2025-07-25 18:31:42,114 | INFO     | task id: 45743349
[2025-07-25 14:32:16] 2025-07-25 18:31:42,114 | INFO     | errors: (none)
[2025-07-25 14:32:16] 2025-07-25 18:31:42,114 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 14:32:16] 2025-07-25 18:31:42,114 | INFO     | pilot state: finished 
[2025-07-25 14:32:16] 2025-07-25 18:31:42,114 | INFO     | transexitcode: 0
[2025-07-25 14:32:16] 2025-07-25 18:31:42,114 | INFO     | exeerrorcode: 0
[2025-07-25 14:32:16] 2025-07-25 18:31:42,114 | INFO     | exeerrordiag: 
[2025-07-25 14:32:16] 2025-07-25 18:31:42,115 | INFO     | exitcode: 0
[2025-07-25 14:32:16] 2025-07-25 18:31:42,115 | INFO     | exitmsg: OK
[2025-07-25 14:32:16] 2025-07-25 18:31:42,115 | INFO     | cpuconsumptiontime: 36494 s
[2025-07-25 14:32:16] 2025-07-25 18:31:42,115 | INFO     | nevents: 400
[2025-07-25 14:32:16] 2025-07-25 18:31:42,115 | INFO     | neventsw: 0
[2025-07-25 14:32:16] 2025-07-25 18:31:42,115 | INFO     | pid: 1177205
[2025-07-25 14:32:16] 2025-07-25 18:31:42,115 | INFO     | pgrp: 1177205
[2025-07-25 14:32:16] 2025-07-25 18:31:42,115 | INFO     | corecount: 8
[2025-07-25 14:32:16] 2025-07-25 18:31:42,115 | INFO     | event service: False
[2025-07-25 14:32:16] 2025-07-25 18:31:42,115 | INFO     | sizes: {0: 2397302, 1: 2397501, 12: 2397791, 22: 2397791, 5997: 2424498, 5999: 2433496, 6002: 2433680, 6018: 2433874}
[2025-07-25 14:32:16] 2025-07-25 18:31:42,115 | INFO     | --------------------------------------------------
[2025-07-25 14:32:16] 2025-07-25 18:31:42,115 | INFO     | 
[2025-07-25 14:32:16] 2025-07-25 18:31:42,115 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-25 14:32:16] 2025-07-25 18:31:42,214 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,214 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,214 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,214 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,214 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,214 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,214 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,214 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,215 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,215 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,215 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,215 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,215 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,215 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,215 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,215 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 14:32:16] 2025-07-25 18:31:42,215 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,215 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 14:32:16] 2025-07-25 18:31:42,215 | INFO     | job 6745014784 has completed (purged errors)
[2025-07-25 14:32:16] 2025-07-25 18:31:42,216 | INFO     | overall cleanup function is called
[2025-07-25 14:32:16] 2025-07-25 18:31:43,225 | INFO     | --- collectZombieJob: --- 10, [1177205]
[2025-07-25 14:32:16] 2025-07-25 18:31:43,226 | INFO     | zombie collector waiting for pid 1177205
[2025-07-25 14:32:16] 2025-07-25 18:31:43,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 14:32:16] 2025-07-25 18:31:43,226 | INFO     | collected zombie processes
[2025-07-25 14:32:16] 2025-07-25 18:31:43,226 | INFO     | will attempt to kill all subprocesses of pid=1177205
[2025-07-25 14:32:16] 2025-07-25 18:31:43,972 | INFO     | process IDs to be killed: [1177205] (in reverse order)
[2025-07-25 14:32:16] 2025-07-25 18:31:44,149 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 14:32:16] 2025-07-25 18:31:44,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 14:32:16] 2025-07-25 18:31:44,169 | INFO     | did not find any defunct processes belonging to 1177205
[2025-07-25 14:32:16] 2025-07-25 18:31:44,188 | INFO     | did not find any defunct processes belonging to 1177205
[2025-07-25 14:32:16] 2025-07-25 18:31:44,188 | INFO     | ready for new job
[2025-07-25 14:32:16] 2025-07-25 18:31:44,189 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 14:32:16] 2025-07-25 18:31:44,190 | INFO     | ***************************************
[2025-07-25 14:32:16] 2025-07-25 18:31:44,190 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 14:32:16] 2025-07-25 18:31:44,190 | INFO     | ***************************************
[2025-07-25 14:32:16] 2025-07-25 18:31:44,191 | INFO     | 
[2025-07-25 14:32:16] 2025-07-25 18:31:44,213 | INFO     | architecture information:
[2025-07-25 14:32:16] 2025-07-25 18:31:44,220 | INFO     | executing command: cat /etc/os-release
[2025-07-25 14:32:16] 2025-07-25 18:31:44,284 | INFO     | cat /etc/os-release:
[2025-07-25 14:32:16] NAME="CentOS Linux"
[2025-07-25 14:32:16] VERSION="7 (Core)"
[2025-07-25 14:32:16] ID="centos"
[2025-07-25 14:32:16] ID_LIKE="rhel fedora"
[2025-07-25 14:32:16] VERSION_ID="7"
[2025-07-25 14:32:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 14:32:16] ANSI_COLOR="0;31"
[2025-07-25 14:32:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 14:32:16] HOME_URL="https://www.centos.org/"
[2025-07-25 14:32:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 14:32:16] 
[2025-07-25 14:32:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 14:32:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 14:32:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 14:32:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 14:32:16] 
[2025-07-25 14:32:16] 2025-07-25 18:31:44,285 | INFO     | ***************************************
[2025-07-25 14:32:16] 2025-07-25 18:31:44,791 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-25 14:32:16] 2025-07-25 18:31:44,903 | INFO     | sufficient remaining disk space (75871813632 B)
[2025-07-25 14:32:16] 2025-07-25 18:31:44,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 14:32:16] 2025-07-25 18:31:44,903 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 14:32:16] 2025-07-25 18:31:44,903 | INFO     | update_server=False
[2025-07-25 14:32:16] 2025-07-25 18:31:44,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 14:32:16] 2025-07-25 18:31:44,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 14:32:16] 2025-07-25 18:31:44,904 | INFO     | aborting loop
[2025-07-25 14:32:16] 2025-07-25 18:31:44,921 | INFO     | all payload control threads have been joined
[2025-07-25 14:32:16] 2025-07-25 18:31:45,537 | INFO     | all data control threads have been joined
[2025-07-25 14:32:16] 2025-07-25 18:31:45,910 | INFO     | [job] job monitor thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:45,913 | INFO     | [job] retrieve thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:45,928 | INFO     | [payload] control thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:45,960 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:45,994 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:45,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 14:32:16] 2025-07-25 18:31:46,010 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 14:32:16] 2025-07-25 18:31:46,159 | INFO     | all job control threads have been joined
[2025-07-25 14:32:16] 2025-07-25 18:31:46,177 | INFO     | [payload] failed_post thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:46,184 | INFO     | [payload] validate_post thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:46,372 | INFO     | [job] validate thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:46,542 | INFO     | [data] control thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:46,643 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 14:32:16] 2025-07-25 18:31:46,900 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:47,166 | INFO     | [job] control thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:47,316 | INFO     | [data] copytool_in thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:47,650 | INFO     | [job] queue monitor thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:48,017 | INFO     | [data] copytool_out thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:50,027 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:55,753 | INFO     | job.realtimelogging is not enabled
[2025-07-25 14:32:16] 2025-07-25 18:31:56,758 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 14:32:16] 2025-07-25 18:31:58,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140308102829888)>', '<ExcThread(monitor, started 140307756726016)>']
[2025-07-25 14:32:16] 2025-07-25 18:32:03,875 | INFO     | all workflow threads have been joined
[2025-07-25 14:32:16] 2025-07-25 18:32:03,876 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 14:32:16] 2025-07-25 18:32:03,876 | INFO     | traces error code: 0
[2025-07-25 14:32:16] 2025-07-25 18:32:03,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 14:32:16] 2025-07-25 18:32:15,104 | INFO     | PID=1170092 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 14:32:16] 2025-07-25 18:32:15,104 | INFO     | .. there are 28 such processes running
[2025-07-25 14:32:16] 2025-07-25 18:32:15,105 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 14:32:16] 2025-07-25 18:32:15,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 14:32:16] 2025-07-25 18:32:15,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 14:32:16] 2025-07-25 18:32:15,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 14:32:16] 2025-07-25 18:32:15,105 | INFO     | [monitor] control thread has ended
[2025-07-25 14:32:16] 2025-07-25 18:32:15,500 [wrapper] ==== pilot stdout END ====
[2025-07-25 14:32:16] 2025-07-25 18:32:15,544 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 14:32:16] 2025-07-25 18:32:15,563 [wrapper] pilotpid: 1170092
[2025-07-25 14:32:16] 2025-07-25 18:32:15,577 [wrapper] Pilot exit status: 0
[2025-07-25 14:32:16] 2025-07-25 18:32:15,647 [wrapper] pandaids: 6745014784
[2025-07-25 14:32:16] 2025-07-25 18:32:15,744 [wrapper] cleanup supervisor_pilot 1545503 1170093
[2025-07-25 14:32:16] 2025-07-25 18:32:15,763 [wrapper] Test setup, not cleaning
[2025-07-25 14:32:16] 2025-07-25 18:32:15,774 [wrapper] apfmon messages muted
[2025-07-25 14:32:16] 2025-07-25 18:32:15,786 [wrapper] ==== wrapper stdout END ====
[2025-07-25 14:32:16] 2025-07-25 18:32:15,808 [wrapper] ==== wrapper stderr END ====
[2025-07-25 14:32:16]  *** Error codes and diagnostics ***
[2025-07-25 14:32:16]     "exeErrorCode": 0,
[2025-07-25 14:32:16]     "exeErrorDiag": "",
[2025-07-25 14:32:16]     "pilotErrorCode": 0,
[2025-07-25 14:32:16]     "pilotErrorDiag": "",
[2025-07-25 14:32:16]  *** Listing of results directory ***
[2025-07-25 14:32:16] total 349724
[2025-07-25 14:32:16] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 06:41 queuedata.json
[2025-07-25 14:32:16] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 06:41 pilot3.tar.gz
[2025-07-25 14:32:16] -rwx------. 1 boincer umatlas     36292 Jul 25 06:44 runpilot2-wrapper.sh
[2025-07-25 14:32:16] -rw-r--r--. 1 boincer umatlas       100 Jul 25 12:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 14:32:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 12:50 run_atlas
[2025-07-25 14:32:16] -rw-r--r--. 1 boincer umatlas       105 Jul 25 12:50 job.xml
[2025-07-25 14:32:16] -rw-r--r--. 2 boincer umatlas 145562686 Jul 25 12:50 EVNT.45743347._001046.pool.root.1
[2025-07-25 14:32:16] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 12:50 start_atlas.sh
[2025-07-25 14:32:16] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 12:50 shared
[2025-07-25 14:32:16] -rw-r--r--. 2 boincer umatlas    542887 Jul 25 12:50 input.tar.gz
[2025-07-25 14:32:16] -rw-r--r--. 1 boincer umatlas         0 Jul 25 12:50 boinc_lockfile
[2025-07-25 14:32:16] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 12:50 pandaJob.out
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas    979309 Jul 25 12:50 agis_schedconf.cvmfs.json
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas   1593052 Jul 25 12:50 agis_ddmendpoints.agis.ALL.json
[2025-07-25 14:32:16] drwx------. 4 boincer umatlas      4096 Jul 25 12:50 pilot3
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas 206916579 Jul 25 14:29 HITS.45743349._019931.pool.root.1
[2025-07-25 14:32:16] -rw-r--r--. 1 boincer umatlas       529 Jul 25 14:29 boinc_task_state.xml
[2025-07-25 14:32:16] -rw-r--r--. 1 boincer umatlas      6933 Jul 25 14:30 init_data.xml
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas      1034 Jul 25 14:31 memory_monitor_summary.json
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas    318418 Jul 25 14:31 log.45743349._019931.job.log.tgz.1
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas        95 Jul 25 14:31 pilot_heartbeat.json
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas      7776 Jul 25 14:31 heartbeat.json
[2025-07-25 14:32:16] -rw-r--r--. 1 boincer umatlas        27 Jul 25 14:32 wrapper_checkpoint.txt
[2025-07-25 14:32:16] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 14:32 boinc_mmap_file
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas       823 Jul 25 14:32 pilotlog.txt
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas    563517 Jul 25 14:32 log.45743349._019931.job.log.1
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas       357 Jul 25 14:32 output.list
[2025-07-25 14:32:16] -rw-r--r--. 1 boincer umatlas       620 Jul 25 14:32 runtime_log
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas    901120 Jul 25 14:32 result.tar.gz
[2025-07-25 14:32:16] -rw-r--r--. 1 boincer umatlas      8655 Jul 25 14:32 runtime_log.err
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas       651 Jul 25 14:32 nCoLDmC6Uz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfKPLDmZy4WSn.diag
[2025-07-25 14:32:16] -rw-r--r--. 1 boincer umatlas     22525 Jul 25 14:32 stderr.txt
[2025-07-25 14:32:16] HITS file was successfully produced:
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas 206916579 Jul 25 14:29 shared/HITS.pool.root.1
[2025-07-25 14:32:16]  *** Contents of shared directory: ***
[2025-07-25 14:32:16] total 345656
[2025-07-25 14:32:16] -rw-r--r--. 2 boincer umatlas 145562686 Jul 25 12:50 ATLAS.root_0
[2025-07-25 14:32:16] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 12:50 start_atlas.sh
[2025-07-25 14:32:16] -rw-r--r--. 2 boincer umatlas    542887 Jul 25 12:50 input.tar.gz
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas 206916579 Jul 25 14:29 HITS.pool.root.1
[2025-07-25 14:32:16] -rw-------. 1 boincer umatlas    901120 Jul 25 14:32 result.tar.gz
14:32:17 (1166514): run_atlas exited; CPU time 36609.706750
14:32:17 (1166514): called boinc_finish(0)

</stderr_txt>
]]>

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