Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:04:42 (2836781): wrapper (7.7.26015): starting
14:04:42 (2836781): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 14:04:42] Arguments: --nthreads 12
[2025-07-25 14:04:42] Threads: 12
[2025-07-25 14:04:42] Checking for CVMFS
[2025-07-25 14:04:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 14:04:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 14:04:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 14:04:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 14:04:42] 2.13.1.0 407057 10905 281316 148748 2 65 40926197 40960001 9454 16776704 0 19299818 99.730 30815247 35485 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 14:04:42] CVMFS is ok
[2025-07-25 14:04:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 14:04:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 14:04:42] Further information can be found at the LHC@home message board.
[2025-07-25 14:04:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 14:04:42] Checking for apptainer binary...
[2025-07-25 14:04:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 14:04:42] Running /usr/bin/apptainer --version
[2025-07-25 14:04:42] apptainer version 1.4.1-1.el9
[2025-07-25 14:04:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 14:04:42] c-210-31-3.aglt2.org
[2025-07-25 14:04:42] apptainer works
[2025-07-25 14:04:42] Set ATHENA_PROC_NUMBER=12
[2025-07-25 14:04:42] Set ATHENA_CORE_NUMBER=12
[2025-07-25 14:04:42] Starting ATLAS job with PandaID=6744955560
[2025-07-25 14:04:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 15:12:39]  *** The last 200 lines of the pilot log: ***
[2025-07-25 15:12:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 15:12:39]  replicas=None
[2025-07-25 15:12:39]  scope=mc23_13p6TeV
[2025-07-25 15:12:39]  status=None
[2025-07-25 15:12:39]  status_code=0
[2025-07-25 15:12:39]  storage_token=
[2025-07-25 15:12:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6744955560/log.45743349._017938.job.log.tgz.1
[2025-07-25 15:12:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/f2/log.45743349._017938.job.log.tgz.1
[2025-07-25 15:12:39]  workdir=None
[2025-07-25 15:12:39] ]
[2025-07-25 15:12:39] 2025-07-25 19:11:59,820 | INFO     | transferring file log.45743349._017938.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6744955560/log.45743349._017938.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 15:12:39] 2025-07-25 19:11:59,821 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6744955560/log.45743349._017938.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._017938.job
[2025-07-25 15:12:39] 2025-07-25 19:11:59,837 | INFO     | adding to output.list: log.45743349._017938.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/f2/log.45743349._017938.job.log.tg
[2025-07-25 15:12:39] 2025-07-25 19:11:59,838 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 15:12:39] 2025-07-25 19:11:59,838 | INFO     | summary of transferred files:
[2025-07-25 15:12:39] 2025-07-25 19:11:59,838 | INFO     |  -- lfn=log.45743349._017938.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 15:12:39] 2025-07-25 19:11:59,838 | INFO     | stage-out finished correctly
[2025-07-25 15:12:39] 2025-07-25 19:12:01,529 | WARNING  | process 2847188 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 15:12:39] 2025-07-25 19:12:01,529 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744955560/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 15:12:39] 2025-07-25 19:12:01,751 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 15:12:39] 2025-07-25 19:12:01,848 | INFO     | number of running child processes to parent process 2847188: 1
[2025-07-25 15:12:39] 2025-07-25 19:12:01,848 | INFO     | maximum number of monitored processes: 6
[2025-07-25 15:12:39] 2025-07-25 19:12:02,013 | INFO     | job 6744955560 has state=finished
[2025-07-25 15:12:39] 2025-07-25 19:12:02,013 | INFO     | preparing for final server update for job 6744955560 in state='finished'
[2025-07-25 15:12:39] 2025-07-25 19:12:02,014 | INFO     | this job has now completed (state=finished)
[2025-07-25 15:12:39] 2025-07-25 19:12:02,014 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 15:12:39] 2025-07-25 19:12:02,014 | INFO     | log transfer has been attempted: DONE
[2025-07-25 15:12:39] 2025-07-25 19:12:02,014 | INFO     | job 6744955560 has finished - writing final server update
[2025-07-25 15:12:39] 2025-07-25 19:12:02,014 | INFO     | total number of processed events: 400 (read)
[2025-07-25 15:12:39] 2025-07-25 19:12:02,015 | INFO     | executing command: lscpu
[2025-07-25 15:12:39] 2025-07-25 19:12:02,062 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 15:12:39] 2025-07-25 19:12:04,351 | INFO     | monitor loop #302: job 0:6744955560 is in state 'finished'
[2025-07-25 15:12:39] 2025-07-25 19:12:04,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 15:12:39] 2025-07-25 19:12:04,730 | INFO     | PID=2840388 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-25 15:12:39] 2025-07-25 19:12:04,730 | INFO     | .. there are 13 such processes running
[2025-07-25 15:12:39] 2025-07-25 19:12:05,785 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-25 15:12:39] 2025-07-25 19:12:05,788 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2771.4507499999995
[2025-07-25 15:12:39] 2025-07-25 19:12:05,797 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744955560/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 15:12:39] 2025-07-25 19:12:05,798 | INFO     | extracted standard info from prmon json
[2025-07-25 15:12:39] 2025-07-25 19:12:05,798 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 15:12:39] 2025-07-25 19:12:05,798 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 15:12:39] 2025-07-25 19:12:05,798 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 15:12:39] 2025-07-25 19:12:05,799 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 15:12:39] 2025-07-25 19:12:05,800 | INFO     | fitting pss+swap vs Time
[2025-07-25 15:12:39] 2025-07-25 19:12:05,800 | INFO     | sum of square deviations: 63666310.0
[2025-07-25 15:12:39] 2025-07-25 19:12:05,800 | INFO     | sum of deviations: 196604464.00000003
[2025-07-25 15:12:39] 2025-07-25 19:12:05,800 | INFO     | mean x: 1753468793.0
[2025-07-25 15:12:39] 2025-07-25 19:12:05,801 | INFO     | mean y: 2763510.7118644067
[2025-07-25 15:12:39] 2025-07-25 19:12:05,801 | INFO     | -- intersect: -5412027957.310893
[2025-07-25 15:12:39] 2025-07-25 19:12:05,801 | INFO     | intersect: -5412027957.310893
[2025-07-25 15:12:39] 2025-07-25 19:12:05,801 | INFO     | chi2: 0.006000790479465669
[2025-07-25 15:12:39] 2025-07-25 19:12:05,801 | INFO     | -- intersect: -5412027957.310893
[2025-07-25 15:12:39] 2025-07-25 19:12:05,801 | INFO     | current memory leak: 3.09 B/s (using 59 data points, chi2=0.01)
[2025-07-25 15:12:39] 2025-07-25 19:12:05,801 | INFO     | could have reported an average CPU frequency of 2744 MHz (6 samples)
[2025-07-25 15:12:39] 2025-07-25 19:12:05,801 | INFO     | ..............................
[2025-07-25 15:12:39] 2025-07-25 19:12:05,802 | INFO     | . Timing measurements:
[2025-07-25 15:12:39] 2025-07-25 19:12:05,802 | INFO     | . get job = 0 s
[2025-07-25 15:12:39] 2025-07-25 19:12:05,802 | INFO     | . initial setup = 2 s
[2025-07-25 15:12:39] 2025-07-25 19:12:05,802 | INFO     | . payload setup = 6 s
[2025-07-25 15:12:39] 2025-07-25 19:12:05,802 | INFO     | . stage-in = 0 s
[2025-07-25 15:12:39] 2025-07-25 19:12:05,802 | INFO     | . payload execution = 4000 s
[2025-07-25 15:12:39] 2025-07-25 19:12:05,802 | INFO     | . stage-out = 0 s
[2025-07-25 15:12:39] 2025-07-25 19:12:05,802 | INFO     | . log creation = 0 s
[2025-07-25 15:12:39] 2025-07-25 19:12:05,802 | INFO     | ..............................
[2025-07-25 15:12:39] 2025-07-25 19:12:05,879 | INFO     | 
[2025-07-25 15:12:39] 2025-07-25 19:12:05,879 | INFO     | job summary report
[2025-07-25 15:12:39] 2025-07-25 19:12:05,879 | INFO     | --------------------------------------------------
[2025-07-25 15:12:39] 2025-07-25 19:12:05,879 | INFO     | PanDA job id: 6744955560
[2025-07-25 15:12:39] 2025-07-25 19:12:05,879 | INFO     | task id: 45743349
[2025-07-25 15:12:39] 2025-07-25 19:12:05,879 | INFO     | errors: (none)
[2025-07-25 15:12:39] 2025-07-25 19:12:05,879 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 15:12:39] 2025-07-25 19:12:05,879 | INFO     | pilot state: finished 
[2025-07-25 15:12:39] 2025-07-25 19:12:05,879 | INFO     | transexitcode: 0
[2025-07-25 15:12:39] 2025-07-25 19:12:05,879 | INFO     | exeerrorcode: 0
[2025-07-25 15:12:39] 2025-07-25 19:12:05,880 | INFO     | exeerrordiag: 
[2025-07-25 15:12:39] 2025-07-25 19:12:05,880 | INFO     | exitcode: 0
[2025-07-25 15:12:39] 2025-07-25 19:12:05,880 | INFO     | exitmsg: OK
[2025-07-25 15:12:39] 2025-07-25 19:12:05,880 | INFO     | cpuconsumptiontime: 43137 s
[2025-07-25 15:12:39] 2025-07-25 19:12:05,880 | INFO     | nevents: 400
[2025-07-25 15:12:39] 2025-07-25 19:12:05,880 | INFO     | neventsw: 0
[2025-07-25 15:12:39] 2025-07-25 19:12:05,880 | INFO     | pid: 2847188
[2025-07-25 15:12:39] 2025-07-25 19:12:05,880 | INFO     | pgrp: 2847188
[2025-07-25 15:12:39] 2025-07-25 19:12:05,880 | INFO     | corecount: 12
[2025-07-25 15:12:39] 2025-07-25 19:12:05,880 | INFO     | event service: False
[2025-07-25 15:12:39] 2025-07-25 19:12:05,880 | INFO     | sizes: {0: 2397302, 1: 2397501, 5: 2397763, 11: 2397819, 4010: 2423746, 4012: 2432744, 4014: 2432928, 4018: 2433122}
[2025-07-25 15:12:39] 2025-07-25 19:12:05,880 | INFO     | --------------------------------------------------
[2025-07-25 15:12:39] 2025-07-25 19:12:05,880 | INFO     | 
[2025-07-25 15:12:39] 2025-07-25 19:12:05,881 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 15:12:39] 2025-07-25 19:12:05,903 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,903 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,903 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,903 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,903 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,904 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 15:12:39] 2025-07-25 19:12:05,905 | INFO     | job 6744955560 has completed (purged errors)
[2025-07-25 15:12:39] 2025-07-25 19:12:05,905 | INFO     | overall cleanup function is called
[2025-07-25 15:12:39] 2025-07-25 19:12:06,912 | INFO     | --- collectZombieJob: --- 10, [2847188]
[2025-07-25 15:12:39] 2025-07-25 19:12:06,912 | INFO     | zombie collector waiting for pid 2847188
[2025-07-25 15:12:39] 2025-07-25 19:12:06,912 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 15:12:39] 2025-07-25 19:12:06,912 | INFO     | collected zombie processes
[2025-07-25 15:12:39] 2025-07-25 19:12:06,912 | INFO     | will attempt to kill all subprocesses of pid=2847188
[2025-07-25 15:12:39] 2025-07-25 19:12:07,131 | INFO     | process IDs to be killed: [2847188] (in reverse order)
[2025-07-25 15:12:39] 2025-07-25 19:12:07,218 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 15:12:39] 2025-07-25 19:12:07,218 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 15:12:39] 2025-07-25 19:12:07,228 | INFO     | did not find any defunct processes belonging to 2847188
[2025-07-25 15:12:39] 2025-07-25 19:12:07,238 | INFO     | did not find any defunct processes belonging to 2847188
[2025-07-25 15:12:39] 2025-07-25 19:12:07,239 | INFO     | ready for new job
[2025-07-25 15:12:39] 2025-07-25 19:12:07,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 15:12:39] 2025-07-25 19:12:07,240 | INFO     | ***************************************
[2025-07-25 15:12:39] 2025-07-25 19:12:07,240 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 15:12:39] 2025-07-25 19:12:07,241 | INFO     | ***************************************
[2025-07-25 15:12:39] 2025-07-25 19:12:07,241 | INFO     | 
[2025-07-25 15:12:39] 2025-07-25 19:12:07,243 | INFO     | architecture information:
[2025-07-25 15:12:39] 2025-07-25 19:12:07,244 | INFO     | executing command: cat /etc/os-release
[2025-07-25 15:12:39] 2025-07-25 19:12:07,258 | INFO     | cat /etc/os-release:
[2025-07-25 15:12:39] NAME="CentOS Linux"
[2025-07-25 15:12:39] VERSION="7 (Core)"
[2025-07-25 15:12:39] ID="centos"
[2025-07-25 15:12:39] ID_LIKE="rhel fedora"
[2025-07-25 15:12:39] VERSION_ID="7"
[2025-07-25 15:12:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 15:12:39] ANSI_COLOR="0;31"
[2025-07-25 15:12:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 15:12:39] HOME_URL="https://www.centos.org/"
[2025-07-25 15:12:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 15:12:39] 
[2025-07-25 15:12:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 15:12:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 15:12:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 15:12:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 15:12:39] 
[2025-07-25 15:12:39] 2025-07-25 19:12:07,258 | INFO     | ***************************************
[2025-07-25 15:12:39] 2025-07-25 19:12:07,761 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 15:12:39] 2025-07-25 19:12:07,781 | INFO     | sufficient remaining disk space (75531026432 B)
[2025-07-25 15:12:39] 2025-07-25 19:12:07,782 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 15:12:39] 2025-07-25 19:12:07,782 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 15:12:39] 2025-07-25 19:12:07,782 | INFO     | update_server=False
[2025-07-25 15:12:39] 2025-07-25 19:12:07,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 15:12:39] 2025-07-25 19:12:07,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 15:12:39] 2025-07-25 19:12:07,843 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 15:12:39] 2025-07-25 19:12:07,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 15:12:39] 2025-07-25 19:12:07,859 | INFO     | aborting loop
[2025-07-25 15:12:39] 2025-07-25 19:12:07,919 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 15:12:39] 2025-07-25 19:12:08,158 | INFO     | all job control threads have been joined
[2025-07-25 15:12:39] 2025-07-25 19:12:08,259 | INFO     | all data control threads have been joined
[2025-07-25 15:12:39] 2025-07-25 19:12:08,787 | INFO     | [job] retrieve thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:08,787 | INFO     | [job] queue monitor thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:08,864 | INFO     | [job] job monitor thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:08,866 | INFO     | all payload control threads have been joined
[2025-07-25 15:12:39] 2025-07-25 19:12:09,163 | INFO     | [job] control thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:09,228 | INFO     | [job] validate thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:09,264 | INFO     | [data] control thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:09,431 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:09,431 | INFO     | [data] copytool_in thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:09,537 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:09,553 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:09,720 | INFO     | [payload] failed_post thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:09,871 | INFO     | [payload] control thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:09,924 | INFO     | [data] copytool_out thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:10,336 | INFO     | [payload] validate_post thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:11,848 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:18,749 | INFO     | job.realtimelogging is not enabled
[2025-07-25 15:12:39] 2025-07-25 19:12:19,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 15:12:39] 2025-07-25 19:12:21,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140441575933760)>', '<ExcThread(monitor, started 140440850388736)>']
[2025-07-25 15:12:39] 2025-07-25 19:12:26,551 | INFO     | all workflow threads have been joined
[2025-07-25 15:12:39] 2025-07-25 19:12:26,551 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 15:12:39] 2025-07-25 19:12:26,552 | INFO     | traces error code: 0
[2025-07-25 15:12:39] 2025-07-25 19:12:26,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 15:12:39] 2025-07-25 19:12:37,782 | INFO     | 4037s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-25 15:12:39] 2025-07-25 19:12:39,092 | INFO     | PID=2840388 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 15:12:39] 2025-07-25 19:12:39,092 | INFO     | .. there are 13 such processes running
[2025-07-25 15:12:39] 2025-07-25 19:12:39,092 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 15:12:39] 2025-07-25 19:12:39,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 15:12:39] 2025-07-25 19:12:39,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 15:12:39] 2025-07-25 19:12:39,092 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 15:12:39] 2025-07-25 19:12:39,092 | INFO     | [monitor] control thread has ended
[2025-07-25 15:12:39] 2025-07-25 19:12:39,222 [wrapper] ==== pilot stdout END ====
[2025-07-25 15:12:39] 2025-07-25 19:12:39,225 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 15:12:39] 2025-07-25 19:12:39,228 [wrapper] pilotpid: 2840388
[2025-07-25 15:12:39] 2025-07-25 19:12:39,230 [wrapper] Pilot exit status: 0
[2025-07-25 15:12:39] 2025-07-25 19:12:39,240 [wrapper] pandaids: 6744955560
[2025-07-25 15:12:39] 2025-07-25 19:12:39,291 [wrapper] cleanup supervisor_pilot 3049316 2840389
[2025-07-25 15:12:39] 2025-07-25 19:12:39,293 [wrapper] Test setup, not cleaning
[2025-07-25 15:12:39] 2025-07-25 19:12:39,296 [wrapper] apfmon messages muted
[2025-07-25 15:12:39] 2025-07-25 19:12:39,299 [wrapper] ==== wrapper stdout END ====
[2025-07-25 15:12:39] 2025-07-25 19:12:39,302 [wrapper] ==== wrapper stderr END ====
[2025-07-25 15:12:39]  *** Error codes and diagnostics ***
[2025-07-25 15:12:39]     "exeErrorCode": 0,
[2025-07-25 15:12:39]     "exeErrorDiag": "",
[2025-07-25 15:12:39]     "pilotErrorCode": 0,
[2025-07-25 15:12:39]     "pilotErrorDiag": "",
[2025-07-25 15:12:39]  *** Listing of results directory ***
[2025-07-25 15:12:39] total 348492
[2025-07-25 15:12:39] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 03:19 pilot3.tar.gz
[2025-07-25 15:12:39] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 03:33 queuedata.json
[2025-07-25 15:12:39] -rwx------. 1 boincer umatlas     36292 Jul 25 03:34 runpilot2-wrapper.sh
[2025-07-25 15:12:39] -rw-r--r--. 1 boincer umatlas       100 Jul 25 14:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 15:12:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 14:04 run_atlas
[2025-07-25 15:12:39] -rw-r--r--. 1 boincer umatlas       105 Jul 25 14:04 job.xml
[2025-07-25 15:12:39] -rw-r--r--. 2 boincer umatlas 143554403 Jul 25 14:04 EVNT.45743347._001147.pool.root.1
[2025-07-25 15:12:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 14:04 start_atlas.sh
[2025-07-25 15:12:39] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 14:04 shared
[2025-07-25 15:12:39] -rw-r--r--. 2 boincer umatlas    542889 Jul 25 14:04 input.tar.gz
[2025-07-25 15:12:39] -rw-r--r--. 1 boincer umatlas         0 Jul 25 14:04 boinc_lockfile
[2025-07-25 15:12:39] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 14:04 pandaJob.out
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas    979309 Jul 25 14:04 agis_schedconf.cvmfs.json
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas   1593052 Jul 25 14:04 agis_ddmendpoints.agis.ALL.json
[2025-07-25 15:12:39] drwx------. 4 boincer umatlas      4096 Jul 25 14:04 pilot3
[2025-07-25 15:12:39] -rw-r--r--. 1 boincer umatlas      6841 Jul 25 15:03 init_data.xml
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas 207886779 Jul 25 15:11 HITS.45743349._017938.pool.root.1
[2025-07-25 15:12:39] -rw-r--r--. 1 boincer umatlas       529 Jul 25 15:11 boinc_task_state.xml
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas      1038 Jul 25 15:11 memory_monitor_summary.json
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas    356706 Jul 25 15:11 log.45743349._017938.job.log.tgz.1
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas        95 Jul 25 15:12 pilot_heartbeat.json
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas      7821 Jul 25 15:12 heartbeat.json
[2025-07-25 15:12:39] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 15:12 boinc_mmap_file
[2025-07-25 15:12:39] -rw-r--r--. 1 boincer umatlas        27 Jul 25 15:12 wrapper_checkpoint.txt
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas       938 Jul 25 15:12 pilotlog.txt
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas    413226 Jul 25 15:12 log.45743349._017938.job.log.1
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas       357 Jul 25 15:12 output.list
[2025-07-25 15:12:39] -rw-r--r--. 1 boincer umatlas       620 Jul 25 15:12 runtime_log
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas    788480 Jul 25 15:12 result.tar.gz
[2025-07-25 15:12:39] -rw-r--r--. 1 boincer umatlas      8672 Jul 25 15:12 runtime_log.err
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas       657 Jul 25 15:12 BHgLDmU7Rz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCeyKDmbM5kum.diag
[2025-07-25 15:12:39] -rw-r--r--. 1 boincer umatlas     22009 Jul 25 15:12 stderr.txt
[2025-07-25 15:12:39] HITS file was successfully produced:
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas 207886779 Jul 25 15:11 shared/HITS.pool.root.1
[2025-07-25 15:12:39]  *** Contents of shared directory: ***
[2025-07-25 15:12:39] total 344532
[2025-07-25 15:12:39] -rw-r--r--. 2 boincer umatlas 143554403 Jul 25 14:04 ATLAS.root_0
[2025-07-25 15:12:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 14:04 start_atlas.sh
[2025-07-25 15:12:39] -rw-r--r--. 2 boincer umatlas    542889 Jul 25 14:04 input.tar.gz
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas 207886779 Jul 25 15:11 HITS.pool.root.1
[2025-07-25 15:12:39] -rw-------. 1 boincer umatlas    788480 Jul 25 15:12 result.tar.gz
15:12:40 (2836781): run_atlas exited; CPU time 43202.074127
15:12:40 (2836781): called boinc_finish(0)

</stderr_txt>
]]>

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