Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:32:33 (3105428): wrapper (7.7.26015): starting
12:32:33 (3105428): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 12:32:33] Arguments: --nthreads 8
[2025-07-25 12:32:33] Threads: 8
[2025-07-25 12:32:33] Checking for CVMFS
[2025-07-25 12:32:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 12:32:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 12:32:33] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 12:32:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 12:32:33] 2.12.6.0 557484 15745 281104 148747 1 335 25304915 32935936 29914 16776704 0 72135686 99.535 115904368 21568 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 12:32:33] CVMFS is ok
[2025-07-25 12:32:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 12:32:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 12:32:33] Further information can be found at the LHC@home message board.
[2025-07-25 12:32:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 12:32:33] Checking for apptainer binary...
[2025-07-25 12:32:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 12:32:33] Running /usr/bin/apptainer --version
[2025-07-25 12:32:33] apptainer version 1.4.1-1.el9
[2025-07-25 12:32:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 12:32:34] c7-3-34.aglt2.org
[2025-07-25 12:32:34] apptainer works
[2025-07-25 12:32:34] Set ATHENA_PROC_NUMBER=8
[2025-07-25 12:32:34] Set ATHENA_CORE_NUMBER=8
[2025-07-25 12:32:34] Starting ATLAS job with PandaID=6744980099
[2025-07-25 12:32:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 16:03:06]  *** The last 200 lines of the pilot log: ***
[2025-07-25 16:03:06] 2025-07-25 20:02:31,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 16:03:06] 2025-07-25 20:02:31,940 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 16:03:06] 2025-07-25 20:02:31,991 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3070.2250104166656
[2025-07-25 16:03:06] 2025-07-25 20:02:32,077 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6744980099/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 16:03:06] 2025-07-25 20:02:32,078 | INFO     | extracted standard info from prmon json
[2025-07-25 16:03:06] 2025-07-25 20:02:32,101 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 16:03:06] 2025-07-25 20:02:32,102 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 16:03:06] 2025-07-25 20:02:32,102 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 16:03:06] 2025-07-25 20:02:32,102 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 16:03:06] 2025-07-25 20:02:32,115 | INFO     | fitting pss+swap vs Time
[2025-07-25 16:03:06] 2025-07-25 20:02:32,115 | INFO     | sum of square deviations: 2671349214.878047
[2025-07-25 16:03:06] 2025-07-25 20:02:32,125 | INFO     | sum of deviations: -21797352523.560978
[2025-07-25 16:03:06] 2025-07-25 20:02:32,126 | INFO     | mean x: 1753467464.0243902
[2025-07-25 16:03:06] 2025-07-25 20:02:32,126 | INFO     | mean y: 2185568.312195122
[2025-07-25 16:03:06] 2025-07-25 20:02:32,126 | INFO     | -- intersect: 14309917496.082254
[2025-07-25 16:03:06] 2025-07-25 20:02:32,126 | INFO     | intersect: 14309917496.082254
[2025-07-25 16:03:06] 2025-07-25 20:02:32,126 | INFO     | chi2: 1.9594703732825265
[2025-07-25 16:03:06] 2025-07-25 20:02:32,127 | INFO     | sum of square deviations: 2480612279.874986
[2025-07-25 16:03:06] 2025-07-25 20:02:32,128 | INFO     | sum of deviations: -17199579347.999992
[2025-07-25 16:03:06] 2025-07-25 20:02:32,128 | INFO     | mean x: 1753467311.525
[2025-07-25 16:03:06] 2025-07-25 20:02:32,128 | INFO     | mean y: 2189219.2
[2025-07-25 16:03:06] 2025-07-25 20:02:32,128 | INFO     | -- intersect: 12160034442.88742
[2025-07-25 16:03:06] 2025-07-25 20:02:32,128 | INFO     | intersect: 12160034442.88742
[2025-07-25 16:03:06] 2025-07-25 20:02:32,128 | INFO     | chi2: 1.9469450095468677
[2025-07-25 16:03:06] 2025-07-25 20:02:32,129 | INFO     | current chi2=1.9469450095468677 (change=0.6392218992663918 %)
[2025-07-25 16:03:06] 2025-07-25 20:02:32,129 | INFO     | right removable region: 199
[2025-07-25 16:03:06] 2025-07-25 20:02:32,129 | INFO     | sum of square deviations: 2480609229.874986
[2025-07-25 16:03:06] 2025-07-25 20:02:32,138 | INFO     | sum of deviations: -50187520813.40001
[2025-07-25 16:03:06] 2025-07-25 20:02:32,138 | INFO     | mean x: 1753467616.525
[2025-07-25 16:03:06] 2025-07-25 20:02:32,139 | INFO     | mean y: 2208039.68
[2025-07-25 16:03:06] 2025-07-25 20:02:32,139 | INFO     | -- intersect: 35478248135.04252
[2025-07-25 16:03:06] 2025-07-25 20:02:32,139 | INFO     | intersect: 35478248135.04252
[2025-07-25 16:03:06] 2025-07-25 20:02:32,139 | INFO     | chi2: 0.43115154434930325
[2025-07-25 16:03:06] 2025-07-25 20:02:32,139 | INFO     | current chi2=0.43115154434930325 (change=77.99652649878888 %)
[2025-07-25 16:03:06] 2025-07-25 20:02:32,139 | INFO     | sum of square deviations: 2299171744.8718076
[2025-07-25 16:03:06] 2025-07-25 20:02:32,140 | INFO     | sum of deviations: -47735615500.487206
[2025-07-25 16:03:06] 2025-07-25 20:02:32,141 | INFO     | mean x: 1753467769.025641
[2025-07-25 16:03:06] 2025-07-25 20:02:32,141 | INFO     | mean y: 2205940.4974358976
[2025-07-25 16:03:06] 2025-07-25 20:02:32,141 | INFO     | -- intersect: 36407865239.93878
[2025-07-25 16:03:06] 2025-07-25 20:02:32,156 | INFO     | intersect: 36407865239.93878
[2025-07-25 16:03:06] 2025-07-25 20:02:32,157 | INFO     | chi2: 0.4123982117399911
[2025-07-25 16:03:06] 2025-07-25 20:02:32,157 | INFO     | current chi2=0.4123982117399911 (change=4.349591890622779 %)
[2025-07-25 16:03:06] 2025-07-25 20:02:32,157 | INFO     | left removable region: 20
[2025-07-25 16:03:06] 2025-07-25 20:02:32,157 | INFO     | sum of square deviations: 1778379364.860336
[2025-07-25 16:03:06] 2025-07-25 20:02:32,158 | INFO     | sum of deviations: -29213287237.832436
[2025-07-25 16:03:06] 2025-07-25 20:02:32,158 | INFO     | mean x: 1753467891.027933
[2025-07-25 16:03:06] 2025-07-25 20:02:32,158 | INFO     | mean y: 2197331.966480447
[2025-07-25 16:03:06] 2025-07-25 20:02:32,158 | INFO     | -- intersect: 28806265898.595486
[2025-07-25 16:03:06] 2025-07-25 20:02:32,158 | INFO     | intersect: 28806265898.595486
[2025-07-25 16:03:06] 2025-07-25 20:02:32,158 | INFO     | chi2: 0.3645209766618388
[2025-07-25 16:03:06] 2025-07-25 20:02:32,159 | INFO     | -- intersect: 28806265898.595486
[2025-07-25 16:03:06] 2025-07-25 20:02:32,159 | INFO     | current memory leak: -16.43 B/s (using 179 data points, chi2=0.36)
[2025-07-25 16:03:06] 2025-07-25 20:02:32,159 | INFO     | could have reported an average CPU frequency of 3075 MHz (10 samples)
[2025-07-25 16:03:06] 2025-07-25 20:02:32,160 | INFO     | ..............................
[2025-07-25 16:03:06] 2025-07-25 20:02:32,160 | INFO     | . Timing measurements:
[2025-07-25 16:03:06] 2025-07-25 20:02:32,160 | INFO     | . get job = 0 s
[2025-07-25 16:03:06] 2025-07-25 20:02:32,160 | INFO     | . initial setup = 3 s
[2025-07-25 16:03:06] 2025-07-25 20:02:32,160 | INFO     | . payload setup = 16 s
[2025-07-25 16:03:06] 2025-07-25 20:02:32,160 | INFO     | . stage-in = 0 s
[2025-07-25 16:03:06] 2025-07-25 20:02:32,160 | INFO     | . payload execution = 12496 s
[2025-07-25 16:03:06] 2025-07-25 20:02:32,160 | INFO     | . stage-out = 2 s
[2025-07-25 16:03:06] 2025-07-25 20:02:32,160 | INFO     | . log creation = 0 s
[2025-07-25 16:03:06] 2025-07-25 20:02:32,160 | INFO     | ..............................
[2025-07-25 16:03:06] 2025-07-25 20:02:32,687 | INFO     | 
[2025-07-25 16:03:06] 2025-07-25 20:02:32,688 | INFO     | job summary report
[2025-07-25 16:03:06] 2025-07-25 20:02:32,688 | INFO     | --------------------------------------------------
[2025-07-25 16:03:06] 2025-07-25 20:02:32,688 | INFO     | PanDA job id: 6744980099
[2025-07-25 16:03:06] 2025-07-25 20:02:32,688 | INFO     | task id: 45743349
[2025-07-25 16:03:06] 2025-07-25 20:02:32,688 | INFO     | errors: (none)
[2025-07-25 16:03:06] 2025-07-25 20:02:32,688 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 16:03:06] 2025-07-25 20:02:32,688 | INFO     | pilot state: finished 
[2025-07-25 16:03:06] 2025-07-25 20:02:32,688 | INFO     | transexitcode: 0
[2025-07-25 16:03:06] 2025-07-25 20:02:32,688 | INFO     | exeerrorcode: 0
[2025-07-25 16:03:06] 2025-07-25 20:02:32,688 | INFO     | exeerrordiag: 
[2025-07-25 16:03:06] 2025-07-25 20:02:32,688 | INFO     | exitcode: 0
[2025-07-25 16:03:06] 2025-07-25 20:02:32,688 | INFO     | exitmsg: OK
[2025-07-25 16:03:06] 2025-07-25 20:02:32,688 | INFO     | cpuconsumptiontime: 38573 s
[2025-07-25 16:03:06] 2025-07-25 20:02:32,689 | INFO     | nevents: 400
[2025-07-25 16:03:06] 2025-07-25 20:02:32,689 | INFO     | neventsw: 0
[2025-07-25 16:03:06] 2025-07-25 20:02:32,689 | INFO     | pid: 3116213
[2025-07-25 16:03:06] 2025-07-25 20:02:32,689 | INFO     | pgrp: 3116213
[2025-07-25 16:03:06] 2025-07-25 20:02:32,689 | INFO     | corecount: 8
[2025-07-25 16:03:06] 2025-07-25 20:02:32,689 | INFO     | event service: False
[2025-07-25 16:03:06] 2025-07-25 20:02:32,689 | INFO     | sizes: {0: 2397302, 1: 2397501, 12: 2397501, 15: 2397791, 23: 2397819, 12516: 2427731, 12517: 2427858, 12521: 2436912, 12524: 2436996, 12536: 2437190}
[2025-07-25 16:03:06] 2025-07-25 20:02:32,689 | INFO     | --------------------------------------------------
[2025-07-25 16:03:06] 2025-07-25 20:02:32,689 | INFO     | 
[2025-07-25 16:03:06] 2025-07-25 20:02:32,689 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-25 16:03:06] 2025-07-25 20:02:32,756 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,756 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,756 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,756 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,756 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,756 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,757 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,757 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,757 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,757 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,757 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,757 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,757 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,757 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,757 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,757 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,757 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,757 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 16:03:06] 2025-07-25 20:02:32,757 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,758 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 16:03:06] 2025-07-25 20:02:32,758 | INFO     | job 6744980099 has completed (purged errors)
[2025-07-25 16:03:06] 2025-07-25 20:02:32,758 | INFO     | overall cleanup function is called
[2025-07-25 16:03:06] 2025-07-25 20:02:32,829 | INFO     | PID=3109089 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-25 16:03:06] 2025-07-25 20:02:32,829 | INFO     | .. there are 34 such processes running
[2025-07-25 16:03:06] 2025-07-25 20:02:33,765 | INFO     | --- collectZombieJob: --- 10, [3116213]
[2025-07-25 16:03:06] 2025-07-25 20:02:33,766 | INFO     | zombie collector waiting for pid 3116213
[2025-07-25 16:03:06] 2025-07-25 20:02:33,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 16:03:06] 2025-07-25 20:02:33,766 | INFO     | collected zombie processes
[2025-07-25 16:03:06] 2025-07-25 20:02:33,766 | INFO     | will attempt to kill all subprocesses of pid=3116213
[2025-07-25 16:03:06] 2025-07-25 20:02:34,669 | INFO     | process IDs to be killed: [3116213] (in reverse order)
[2025-07-25 16:03:06] 2025-07-25 20:02:34,841 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 16:03:06] 2025-07-25 20:02:34,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 16:03:06] 2025-07-25 20:02:34,863 | INFO     | did not find any defunct processes belonging to 3116213
[2025-07-25 16:03:06] 2025-07-25 20:02:34,885 | INFO     | did not find any defunct processes belonging to 3116213
[2025-07-25 16:03:06] 2025-07-25 20:02:34,886 | INFO     | ready for new job
[2025-07-25 16:03:06] 2025-07-25 20:02:34,886 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 16:03:06] 2025-07-25 20:02:34,887 | INFO     | ***************************************
[2025-07-25 16:03:06] 2025-07-25 20:02:34,887 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 16:03:06] 2025-07-25 20:02:34,887 | INFO     | ***************************************
[2025-07-25 16:03:06] 2025-07-25 20:02:34,888 | INFO     | 
[2025-07-25 16:03:06] 2025-07-25 20:02:34,906 | INFO     | architecture information:
[2025-07-25 16:03:06] 2025-07-25 20:02:34,906 | INFO     | executing command: cat /etc/os-release
[2025-07-25 16:03:06] 2025-07-25 20:02:34,925 | INFO     | cat /etc/os-release:
[2025-07-25 16:03:06] NAME="CentOS Linux"
[2025-07-25 16:03:06] VERSION="7 (Core)"
[2025-07-25 16:03:06] ID="centos"
[2025-07-25 16:03:06] ID_LIKE="rhel fedora"
[2025-07-25 16:03:06] VERSION_ID="7"
[2025-07-25 16:03:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 16:03:06] ANSI_COLOR="0;31"
[2025-07-25 16:03:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 16:03:06] HOME_URL="https://www.centos.org/"
[2025-07-25 16:03:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 16:03:06] 
[2025-07-25 16:03:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 16:03:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 16:03:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 16:03:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 16:03:06] 
[2025-07-25 16:03:06] 2025-07-25 20:02:34,925 | INFO     | ***************************************
[2025-07-25 16:03:06] 2025-07-25 20:02:35,430 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-25 16:03:06] 2025-07-25 20:02:35,453 | INFO     | sufficient remaining disk space (74961649664 B)
[2025-07-25 16:03:06] 2025-07-25 20:02:35,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 16:03:06] 2025-07-25 20:02:35,453 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 16:03:06] 2025-07-25 20:02:35,453 | INFO     | update_server=False
[2025-07-25 16:03:06] 2025-07-25 20:02:35,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 16:03:06] 2025-07-25 20:02:35,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 16:03:06] 2025-07-25 20:02:35,455 | INFO     | aborting loop
[2025-07-25 16:03:06] 2025-07-25 20:02:35,877 | INFO     | all data control threads have been joined
[2025-07-25 16:03:06] 2025-07-25 20:02:36,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 16:03:06] 2025-07-25 20:02:36,304 | INFO     | all payload control threads have been joined
[2025-07-25 16:03:06] 2025-07-25 20:02:36,460 | INFO     | [job] retrieve thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:36,460 | INFO     | [job] job monitor thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:36,492 | INFO     | [payload] failed_post thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:36,593 | INFO     | all job control threads have been joined
[2025-07-25 16:03:06] 2025-07-25 20:02:36,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 16:03:06] 2025-07-25 20:02:36,786 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:36,787 | INFO     | [job] validate thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:36,883 | INFO     | [data] control thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:37,160 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:37,171 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:37,273 | INFO     | [data] copytool_in thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:37,310 | INFO     | [payload] control thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:37,599 | INFO     | [job] control thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:37,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 16:03:06] 2025-07-25 20:02:37,759 | INFO     | [payload] validate_post thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:37,781 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:38,115 | INFO     | [data] copytool_out thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:38,706 | INFO     | [job] queue monitor thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:40,619 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 16:03:06] 2025-07-25 20:02:41,733 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139663687169856)>', '<ExcThread(monitor, started 139663067047680)>']
[2025-07-25 16:03:06] 2025-07-25 20:02:46,759 | INFO     | all workflow threads have been joined
[2025-07-25 16:03:06] 2025-07-25 20:02:46,760 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 16:03:06] 2025-07-25 20:02:46,760 | INFO     | traces error code: 0
[2025-07-25 16:03:06] 2025-07-25 20:02:46,760 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 16:03:06] 2025-07-25 20:02:57,060 [wrapper] supervise_pilot (15 min periods counter: 15)
[2025-07-25 16:03:06] 2025-07-25 20:03:06,188 | INFO     | PID=3109089 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 16:03:06] 2025-07-25 20:03:06,188 | INFO     | .. there are 33 such processes running
[2025-07-25 16:03:06] 2025-07-25 20:03:06,188 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 16:03:06] 2025-07-25 20:03:06,188 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 16:03:06] 2025-07-25 20:03:06,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 16:03:06] 2025-07-25 20:03:06,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 16:03:06] 2025-07-25 20:03:06,189 | INFO     | [monitor] control thread has ended
[2025-07-25 16:03:06] 2025-07-25 20:03:06,430 [wrapper] ==== pilot stdout END ====
[2025-07-25 16:03:06] 2025-07-25 20:03:06,441 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 16:03:06] 2025-07-25 20:03:06,448 [wrapper] pilotpid: 3109089
[2025-07-25 16:03:06] 2025-07-25 20:03:06,451 [wrapper] Pilot exit status: 0
[2025-07-25 16:03:06] 2025-07-25 20:03:06,517 [wrapper] pandaids: 6744980099
[2025-07-25 16:03:06] 2025-07-25 20:03:06,661 [wrapper] cleanup supervisor_pilot   23256 3109090
[2025-07-25 16:03:06] 2025-07-25 20:03:06,669 [wrapper] Test setup, not cleaning
[2025-07-25 16:03:06] 2025-07-25 20:03:06,676 [wrapper] apfmon messages muted
[2025-07-25 16:03:06] 2025-07-25 20:03:06,682 [wrapper] ==== wrapper stdout END ====
[2025-07-25 16:03:06] 2025-07-25 20:03:06,694 [wrapper] ==== wrapper stderr END ====
[2025-07-25 16:03:06]  *** Error codes and diagnostics ***
[2025-07-25 16:03:06]     "exeErrorCode": 0,
[2025-07-25 16:03:06]     "exeErrorDiag": "",
[2025-07-25 16:03:06]     "pilotErrorCode": 0,
[2025-07-25 16:03:06]     "pilotErrorDiag": "",
[2025-07-25 16:03:06]  *** Listing of results directory ***
[2025-07-25 16:03:06] total 353168
[2025-07-25 16:03:06] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 05:47 pilot3.tar.gz
[2025-07-25 16:03:06] -rwx------. 1 boincer umatlas     36292 Jul 25 06:08 runpilot2-wrapper.sh
[2025-07-25 16:03:06] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 06:08 queuedata.json
[2025-07-25 16:03:06] -rw-r--r--. 1 boincer umatlas       100 Jul 25 12:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 16:03:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 12:32 run_atlas
[2025-07-25 16:03:06] -rw-r--r--. 1 boincer umatlas       105 Jul 25 12:32 job.xml
[2025-07-25 16:03:06] -rw-r--r--. 2 boincer umatlas 146721954 Jul 25 12:32 EVNT.45743347._001023.pool.root.1
[2025-07-25 16:03:06] -rw-r--r--. 2 boincer umatlas    542887 Jul 25 12:32 input.tar.gz
[2025-07-25 16:03:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 12:32 start_atlas.sh
[2025-07-25 16:03:06] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 12:32 shared
[2025-07-25 16:03:06] -rw-r--r--. 1 boincer umatlas         0 Jul 25 12:32 boinc_lockfile
[2025-07-25 16:03:06] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 12:32 pandaJob.out
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas    979309 Jul 25 12:32 agis_schedconf.cvmfs.json
[2025-07-25 16:03:06] drwx------. 4 boincer umatlas      4096 Jul 25 12:33 pilot3
[2025-07-25 16:03:06] -rw-r--r--. 1 boincer umatlas      6934 Jul 25 15:54 init_data.xml
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas 208240025 Jul 25 16:01 HITS.45743349._019578.pool.root.1
[2025-07-25 16:03:06] -rw-r--r--. 1 boincer umatlas       531 Jul 25 16:01 boinc_task_state.xml
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas      1042 Jul 25 16:02 memory_monitor_summary.json
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas        95 Jul 25 16:02 pilot_heartbeat.json
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas   1593052 Jul 25 16:02 agis_ddmendpoints.agis.ALL.json
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas    370600 Jul 25 16:02 log.45743349._019578.job.log.tgz.1
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas      7794 Jul 25 16:02 heartbeat.json
[2025-07-25 16:03:06] -rw-r--r--. 1 boincer umatlas        28 Jul 25 16:03 wrapper_checkpoint.txt
[2025-07-25 16:03:06] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 16:03 boinc_mmap_file
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas       823 Jul 25 16:03 pilotlog.txt
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas   1034097 Jul 25 16:03 log.45743349._019578.job.log.1
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas       357 Jul 25 16:03 output.list
[2025-07-25 16:03:06] -rw-r--r--. 1 boincer umatlas       620 Jul 25 16:03 runtime_log
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas   1423360 Jul 25 16:03 result.tar.gz
[2025-07-25 16:03:06] -rw-r--r--. 1 boincer umatlas      8656 Jul 25 16:03 runtime_log.err
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas       659 Jul 25 16:03 DwlKDmIXUz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTGPLDmK8KGJm.diag
[2025-07-25 16:03:06] -rw-r--r--. 1 boincer umatlas     21306 Jul 25 16:03 stderr.txt
[2025-07-25 16:03:06] HITS file was successfully produced:
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas 208240025 Jul 25 16:01 shared/HITS.pool.root.1
[2025-07-25 16:03:06]  *** Contents of shared directory: ***
[2025-07-25 16:03:06] total 348588
[2025-07-25 16:03:06] -rw-r--r--. 2 boincer umatlas 146721954 Jul 25 12:32 ATLAS.root_0
[2025-07-25 16:03:06] -rw-r--r--. 2 boincer umatlas    542887 Jul 25 12:32 input.tar.gz
[2025-07-25 16:03:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 12:32 start_atlas.sh
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas 208240025 Jul 25 16:01 HITS.pool.root.1
[2025-07-25 16:03:06] -rw-------. 1 boincer umatlas   1423360 Jul 25 16:03 result.tar.gz
16:03:08 (3105428): run_atlas exited; CPU time 39055.994051
16:03:08 (3105428): called boinc_finish(0)

</stderr_txt>
]]>

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