Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:36:33 (5563): wrapper (7.7.26015): starting
08:36:33 (5563): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 08:36:33] Arguments: --nthreads 8
[2025-07-26 08:36:33] Threads: 8
[2025-07-26 08:36:33] Checking for CVMFS
[2025-07-26 08:36:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 08:36:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 08:36:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 08:36:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 08:36:36] 2.11.2.0 4026 107933 135500 148767 2 109 21649467 25165825 4358 130560 0 67930919 99.854 47262974 3281 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-26 08:36:36] CVMFS is ok
[2025-07-26 08:36:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 08:36:36] Checking for apptainer binary...
[2025-07-26 08:36:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 08:36:36] Running /usr/bin/apptainer --version
[2025-07-26 08:36:36] apptainer version 1.3.2-1.el7
[2025-07-26 08:36:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 08:36:47] cg-vwn218.simple-grid.lan
[2025-07-26 08:36:47] apptainer works
[2025-07-26 08:36:47] Set ATHENA_PROC_NUMBER=8
[2025-07-26 08:36:47] Set ATHENA_CORE_NUMBER=8
[2025-07-26 08:36:47] Starting ATLAS job with PandaID=6745054860
[2025-07-26 08:36:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 18:46:56]  *** The last 200 lines of the pilot log: ***
[2025-07-26 18:46:56] 2025-07-26 11:19:17,535 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 18:46:56] 2025-07-26 11:19:17,535 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 18:46:56] 2025-07-26 11:19:17,541 | INFO     | fitting pss+swap vs Time
[2025-07-26 18:46:56] 2025-07-26 11:19:17,542 | INFO     | sum of square deviations: 6519285025.0
[2025-07-26 18:46:56] 2025-07-26 11:19:17,544 | INFO     | sum of deviations: -35353782688.00001
[2025-07-26 18:46:56] 2025-07-26 11:19:17,544 | INFO     | mean x: 1753520271.5
[2025-07-26 18:46:56] 2025-07-26 11:19:17,544 | INFO     | mean y: 2503291.413043478
[2025-07-26 18:46:56] 2025-07-26 11:19:17,544 | INFO     | -- intersect: 9511763030.768246
[2025-07-26 18:46:56] 2025-07-26 11:19:17,545 | INFO     | intersect: 9511763030.768246
[2025-07-26 18:46:56] 2025-07-26 11:19:17,545 | INFO     | chi2: 3.4602087308618086
[2025-07-26 18:46:56] 2025-07-26 11:19:17,546 | INFO     | sum of square deviations: 6171352920.0
[2025-07-26 18:46:56] 2025-07-26 11:19:17,548 | INFO     | sum of deviations: 2374878657.0000014
[2025-07-26 18:46:56] 2025-07-26 11:19:17,548 | INFO     | mean x: 1753520119.0
[2025-07-26 18:46:56] 2025-07-26 11:19:17,548 | INFO     | mean y: 2519649.95202952
[2025-07-26 18:46:56] 2025-07-26 11:19:17,548 | INFO     | -- intersect: -672275254.7012606
[2025-07-26 18:46:56] 2025-07-26 11:19:17,548 | INFO     | intersect: -672275254.7012606
[2025-07-26 18:46:56] 2025-07-26 11:19:17,549 | INFO     | chi2: 1.8671206912125486
[2025-07-26 18:46:56] 2025-07-26 11:19:17,549 | INFO     | current chi2=1.8671206912125486 (change=46.0402294647838 %)
[2025-07-26 18:46:56] 2025-07-26 11:19:17,549 | INFO     | sum of square deviations: 5836025702.5
[2025-07-26 18:46:56] 2025-07-26 11:19:17,558 | INFO     | sum of deviations: 2453712189.9999976
[2025-07-26 18:46:56] 2025-07-26 11:19:17,558 | INFO     | mean x: 1753519966.5
[2025-07-26 18:46:56] 2025-07-26 11:19:17,558 | INFO     | mean y: 2519685.8195488723
[2025-07-26 18:46:56] 2025-07-26 11:19:17,558 | INFO     | -- intersect: -734734318.2823012
[2025-07-26 18:46:56] 2025-07-26 11:19:17,559 | INFO     | intersect: -734734318.2823012
[2025-07-26 18:46:56] 2025-07-26 11:19:17,559 | INFO     | chi2: 1.867372656664651
[2025-07-26 18:46:56] 2025-07-26 11:19:17,559 | INFO     | current chi2=1.867372656664651 (change=-0.013494866897898996 %)
[2025-07-26 18:46:56] 2025-07-26 11:19:17,559 | INFO     | right removable region: 265
[2025-07-26 18:46:56] 2025-07-26 11:19:17,560 | INFO     | sum of square deviations: 6171352920.0
[2025-07-26 18:46:56] 2025-07-26 11:19:17,562 | INFO     | sum of deviations: -84823165334.0
[2025-07-26 18:46:56] 2025-07-26 11:19:17,562 | INFO     | mean x: 1753520424.0
[2025-07-26 18:46:56] 2025-07-26 11:19:17,562 | INFO     | mean y: 2524833.5166051663
[2025-07-26 18:46:56] 2025-07-26 11:19:17,562 | INFO     | -- intersect: 24104071896.14964
[2025-07-26 18:46:56] 2025-07-26 11:19:17,563 | INFO     | intersect: 24104071896.14964
[2025-07-26 18:46:56] 2025-07-26 11:19:17,563 | INFO     | chi2: 1.8215802869624733
[2025-07-26 18:46:56] 2025-07-26 11:19:17,563 | INFO     | current chi2=1.8215802869624733 (change=47.35634672221679 %)
[2025-07-26 18:46:56] 2025-07-26 11:19:17,564 | INFO     | sum of square deviations: 5836025702.5
[2025-07-26 18:46:56] 2025-07-26 11:19:17,566 | INFO     | sum of deviations: -82431061832.5
[2025-07-26 18:46:56] 2025-07-26 11:19:17,566 | INFO     | mean x: 1753520576.5
[2025-07-26 18:46:56] 2025-07-26 11:19:17,566 | INFO     | mean y: 2523721.2443609023
[2025-07-26 18:46:56] 2025-07-26 11:19:17,566 | INFO     | -- intersect: 24770160197.573357
[2025-07-26 18:46:56] 2025-07-26 11:19:17,566 | INFO     | intersect: 24770160197.573357
[2025-07-26 18:46:56] 2025-07-26 11:19:17,573 | INFO     | chi2: 1.8077614496494498
[2025-07-26 18:46:56] 2025-07-26 11:19:17,573 | INFO     | current chi2=1.8077614496494498 (change=0.758618075301347 %)
[2025-07-26 18:46:56] 2025-07-26 11:19:17,574 | INFO     | left removable region: 20
[2025-07-26 18:46:56] 2025-07-26 11:19:17,574 | INFO     | sum of square deviations: 4560048290.0
[2025-07-26 18:46:56] 2025-07-26 11:19:17,576 | INFO     | sum of deviations: -28493596479.0
[2025-07-26 18:46:56] 2025-07-26 11:19:17,577 | INFO     | mean x: 1753520546.0
[2025-07-26 18:46:56] 2025-07-26 11:19:17,577 | INFO     | mean y: 2533438.2897959184
[2025-07-26 18:46:56] 2025-07-26 11:19:17,577 | INFO     | -- intersect: 10959458382.468351
[2025-07-26 18:46:56] 2025-07-26 11:19:17,577 | INFO     | intersect: 10959458382.468351
[2025-07-26 18:46:56] 2025-07-26 11:19:17,577 | INFO     | chi2: 0.1404389941202061
[2025-07-26 18:46:56] 2025-07-26 11:19:17,578 | INFO     | -- intersect: 10959458382.468351
[2025-07-26 18:46:56] 2025-07-26 11:19:17,578 | INFO     | current memory leak: -6.25 B/s (using 245 data points, chi2=0.14)
[2025-07-26 18:46:56] 2025-07-26 11:19:17,579 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-26 18:46:56] 2025-07-26 11:19:17,579 | INFO     | ..............................
[2025-07-26 18:46:56] 2025-07-26 11:19:17,579 | INFO     | . Timing measurements:
[2025-07-26 18:46:56] 2025-07-26 11:19:17,579 | INFO     | . get job = 0 s
[2025-07-26 18:46:56] 2025-07-26 11:19:17,579 | INFO     | . initial setup = 2 s
[2025-07-26 18:46:56] 2025-07-26 11:19:17,579 | INFO     | . payload setup = 13 s
[2025-07-26 18:46:56] 2025-07-26 11:19:17,579 | INFO     | . stage-in = 0 s
[2025-07-26 18:46:56] 2025-07-26 11:19:17,579 | INFO     | . payload execution = 16797 s
[2025-07-26 18:46:56] 2025-07-26 11:19:17,579 | INFO     | . stage-out = 4 s
[2025-07-26 18:46:56] 2025-07-26 11:19:17,580 | INFO     | . log creation = 1 s
[2025-07-26 18:46:56] 2025-07-26 11:19:17,580 | INFO     | ..............................
[2025-07-26 18:46:56] 2025-07-26 11:19:17,715 | INFO     | 
[2025-07-26 18:46:56] 2025-07-26 11:19:17,716 | INFO     | job summary report
[2025-07-26 18:46:56] 2025-07-26 11:19:17,716 | INFO     | --------------------------------------------------
[2025-07-26 18:46:56] 2025-07-26 11:19:17,716 | INFO     | PanDA job id: 6745054860
[2025-07-26 18:46:56] 2025-07-26 11:19:17,716 | INFO     | task id: 45743349
[2025-07-26 18:46:56] 2025-07-26 11:19:17,716 | INFO     | errors: (none)
[2025-07-26 18:46:56] 2025-07-26 11:19:17,716 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 18:46:56] 2025-07-26 11:19:17,716 | INFO     | pilot state: finished 
[2025-07-26 18:46:56] 2025-07-26 11:19:17,716 | INFO     | transexitcode: 0
[2025-07-26 18:46:56] 2025-07-26 11:19:17,716 | INFO     | exeerrorcode: 0
[2025-07-26 18:46:56] 2025-07-26 11:19:17,716 | INFO     | exeerrordiag: 
[2025-07-26 18:46:56] 2025-07-26 11:19:17,717 | INFO     | exitcode: 0
[2025-07-26 18:46:56] 2025-07-26 11:19:17,717 | INFO     | exitmsg: OK
[2025-07-26 18:46:56] 2025-07-26 11:19:17,717 | INFO     | cpuconsumptiontime: 62867 s
[2025-07-26 18:46:56] 2025-07-26 11:19:17,717 | INFO     | nevents: 400
[2025-07-26 18:46:56] 2025-07-26 11:19:17,717 | INFO     | neventsw: 0
[2025-07-26 18:46:56] 2025-07-26 11:19:17,717 | INFO     | pid: 16155
[2025-07-26 18:46:56] 2025-07-26 11:19:17,717 | INFO     | pgrp: 16155
[2025-07-26 18:46:56] 2025-07-26 11:19:17,717 | INFO     | corecount: 8
[2025-07-26 18:46:56] 2025-07-26 11:19:17,717 | INFO     | event service: False
[2025-07-26 18:46:56] 2025-07-26 11:19:17,717 | INFO     | sizes: {0: 2396645, 1: 2397502, 9: 2397764, 12: 2397792, 16814: 2429241, 16819: 2438241, 16820: 2438425, 16908: 2438619}
[2025-07-26 18:46:56] 2025-07-26 11:19:17,717 | INFO     | --------------------------------------------------
[2025-07-26 18:46:56] 2025-07-26 11:19:17,717 | INFO     | 
[2025-07-26 18:46:56] 2025-07-26 11:19:17,718 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2025-07-26 18:46:56] 2025-07-26 11:19:18,181 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,182 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,182 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,182 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,182 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,182 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,182 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,182 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,183 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 18:46:56] 2025-07-26 11:19:18,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,184 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 18:46:56] 2025-07-26 11:19:18,184 | INFO     | job 6745054860 has completed (purged errors)
[2025-07-26 18:46:56] 2025-07-26 11:19:18,184 | INFO     | overall cleanup function is called
[2025-07-26 18:46:56] 2025-07-26 11:19:19,197 | INFO     | --- collectZombieJob: --- 10, [16155]
[2025-07-26 18:46:56] 2025-07-26 11:19:19,197 | INFO     | zombie collector waiting for pid 16155
[2025-07-26 18:46:56] 2025-07-26 11:19:19,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 18:46:56] 2025-07-26 11:19:19,197 | INFO     | collected zombie processes
[2025-07-26 18:46:56] 2025-07-26 11:19:19,197 | INFO     | will attempt to kill all subprocesses of pid=16155
[2025-07-26 18:46:56] 2025-07-26 11:19:19,328 | INFO     | process IDs to be killed: [16155] (in reverse order)
[2025-07-26 18:46:56] 2025-07-26 11:19:20,033 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 18:46:56] 2025-07-26 11:19:20,034 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 18:46:56] 2025-07-26 11:19:20,037 | INFO     | did not find any defunct processes belonging to 16155
[2025-07-26 18:46:56] 2025-07-26 11:19:20,039 | INFO     | did not find any defunct processes belonging to 16155
[2025-07-26 18:46:56] 2025-07-26 11:19:20,040 | INFO     | ready for new job
[2025-07-26 18:46:56] 2025-07-26 11:19:20,040 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 18:46:56] 2025-07-26 11:19:20,042 | INFO     | ***************************************
[2025-07-26 18:46:56] 2025-07-26 11:19:20,042 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 18:46:56] 2025-07-26 11:19:20,042 | INFO     | ***************************************
[2025-07-26 18:46:56] 2025-07-26 11:19:20,042 | INFO     | 
[2025-07-26 18:46:56] 2025-07-26 11:19:20,043 | INFO     | pilot is running in a VM
[2025-07-26 18:46:56] 2025-07-26 11:19:20,043 | INFO     | architecture information:
[2025-07-26 18:46:56] 2025-07-26 11:19:20,067 | INFO     | executing command: cat /etc/os-release
[2025-07-26 18:46:56] 2025-07-26 11:19:20,359 | INFO     | cat /etc/os-release:
[2025-07-26 18:46:56] NAME="CentOS Linux"
[2025-07-26 18:46:56] VERSION="7 (Core)"
[2025-07-26 18:46:56] ID="centos"
[2025-07-26 18:46:56] ID_LIKE="rhel fedora"
[2025-07-26 18:46:56] VERSION_ID="7"
[2025-07-26 18:46:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 18:46:56] ANSI_COLOR="0;31"
[2025-07-26 18:46:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 18:46:56] HOME_URL="https://www.centos.org/"
[2025-07-26 18:46:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 18:46:56] 
[2025-07-26 18:46:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 18:46:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 18:46:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 18:46:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 18:46:56] 
[2025-07-26 18:46:56] 2025-07-26 11:19:20,359 | INFO     | ***************************************
[2025-07-26 18:46:56] 2025-07-26 11:19:20,862 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2025-07-26 18:46:56] 2025-07-26 11:19:21,039 | INFO     | sufficient remaining disk space (496212377600 B)
[2025-07-26 18:46:56] 2025-07-26 11:19:21,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 18:46:56] 2025-07-26 11:19:21,040 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 18:46:56] 2025-07-26 11:19:21,040 | INFO     | update_server=False
[2025-07-26 18:46:56] 2025-07-26 11:19:21,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 18:46:56] 2025-07-26 11:19:21,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 18:46:56] 2025-07-26 11:19:21,085 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 18:46:56] 2025-07-26 11:19:21,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:46:56] 2025-07-26 11:19:21,146 | INFO     | aborting loop
[2025-07-26 18:46:56] 2025-07-26 11:19:21,676 | INFO     | all data control threads have been joined
[2025-07-26 18:46:56] 2025-07-26 11:19:22,046 | INFO     | [job] retrieve thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:22,082 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:22,135 | INFO     | [data] copytool_in thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:22,152 | INFO     | [job] job monitor thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:22,263 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:22,341 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:22,431 | INFO     | all payload control threads have been joined
[2025-07-26 18:46:56] 2025-07-26 11:19:22,662 | INFO     | [payload] validate_post thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:22,678 | INFO     | all job control threads have been joined
[2025-07-26 18:46:56] 2025-07-26 11:19:22,682 | INFO     | [data] control thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:22,730 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:46:56] 2025-07-26 11:19:23,093 | INFO     | [data] copytool_out thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:23,234 | INFO     | [job] validate thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:23,264 | INFO     | [payload] failed_post thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:23,336 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:23,437 | INFO     | [payload] control thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:23,684 | INFO     | [job] control thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:23,736 | INFO     | [job] queue monitor thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:25,050 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 18:46:56] 2025-07-26 11:19:26,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140542696613696)>', '<ExcThread(monitor, started 140542251882240)>']
[2025-07-26 18:46:56] 2025-07-26 11:19:31,975 | INFO     | all workflow threads have been joined
[2025-07-26 18:46:56] 2025-07-26 11:19:31,975 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 18:46:56] 2025-07-26 11:19:31,975 | INFO     | traces error code: 0
[2025-07-26 18:46:56] 2025-07-26 11:19:31,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 18:46:56] 2025-07-26 11:19:50,608 | INFO     | PID=9597 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 18:46:56] 2025-07-26 11:19:50,608 | INFO     | .. there are 9 such processes running
[2025-07-26 18:46:56] 2025-07-26 11:19:50,609 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 18:46:56] 2025-07-26 11:19:50,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 18:46:56] 2025-07-26 11:19:50,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 18:46:56] 2025-07-26 11:19:50,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 18:46:56] 2025-07-26 11:19:50,609 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 18:46:56] 2025-07-26 11:19:50,609 | INFO     | [monitor] control thread has ended
[2025-07-26 18:46:56] 2025-07-26 11:19:50,852 [wrapper] ==== pilot stdout END ====
[2025-07-26 18:46:56] 2025-07-26 11:19:50,867 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 18:46:56] 2025-07-26 11:19:50,883 [wrapper] pilotpid: 9597
[2025-07-26 18:46:56] 2025-07-26 11:19:50,902 [wrapper] Pilot exit status: 0
[2025-07-26 18:46:56] 2025-07-26 11:19:51,343 [wrapper] pandaids: 6745054860
[2025-07-26 18:46:56] 2025-07-26 11:19:52,530 [wrapper] cleanup supervisor_pilot  9959 9599
[2025-07-26 18:46:56] 2025-07-26 11:19:52,541 [wrapper] Test setup, not cleaning
[2025-07-26 18:46:56] 2025-07-26 11:19:52,545 [wrapper] apfmon messages muted
[2025-07-26 18:46:56] 2025-07-26 11:19:52,549 [wrapper] ==== wrapper stdout END ====
[2025-07-26 18:46:56] 2025-07-26 11:19:52,567 [wrapper] ==== wrapper stderr END ====
[2025-07-26 18:46:56]  *** Error codes and diagnostics ***
[2025-07-26 18:46:56]     "exeErrorCode": 0,
[2025-07-26 18:46:56]     "exeErrorDiag": "",
[2025-07-26 18:46:56]     "pilotErrorCode": 0,
[2025-07-26 18:46:56]     "pilotErrorDiag": "",
[2025-07-26 18:46:56]  *** Listing of results directory ***
[2025-07-26 18:46:56] total 438516
[2025-07-26 18:46:56] -rw-r--r--. 1 boinc boinc    530466 Jul 25 14:51 pilot3.tar.gz
[2025-07-26 18:46:56] -rw-r--r--. 1 boinc boinc      5112 Jul 25 15:01 queuedata.json
[2025-07-26 18:46:56] -rwx------. 1 boinc boinc     36292 Jul 25 15:07 runpilot2-wrapper.sh
[2025-07-26 18:46:56] -rw-r--r--. 1 boinc boinc       100 Jul 26 08:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 18:46:56] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 08:36 run_atlas
[2025-07-26 18:46:56] -rw-r--r--. 1 boinc boinc       105 Jul 26 08:36 job.xml
[2025-07-26 18:46:56] -rw-r--r--. 1 boinc boinc      6392 Jul 26 08:36 init_data.xml
[2025-07-26 18:46:56] -rw-r--r--. 2 boinc boinc 229363971 Jul 26 08:36 EVNT.45743347._001232.pool.root.1
[2025-07-26 18:46:56] -rw-r--r--. 2 boinc boinc     15095 Jul 26 08:36 start_atlas.sh
[2025-07-26 18:46:56] drwxrwx--x. 2 boinc boinc        68 Jul 26 08:36 shared
[2025-07-26 18:46:56] -rw-r--r--. 2 boinc boinc    542895 Jul 26 08:36 input.tar.gz
[2025-07-26 18:46:56] -rw-r--r--. 1 boinc boinc         0 Jul 26 08:36 boinc_lockfile
[2025-07-26 18:46:56] -rw-r--r--. 1 boinc boinc      2562 Jul 26 08:36 pandaJob.out
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc    980001 Jul 26 08:37 agis_schedconf.cvmfs.json
[2025-07-26 18:46:56] drwx------. 4 boinc boinc      4096 Jul 26 08:37 pilot3
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc 212090217 Jul 26 13:16 HITS.45743349._021443.pool.root.1
[2025-07-26 18:46:56] -rw-r--r--. 1 boinc boinc       531 Jul 26 13:16 boinc_task_state.xml
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc      1033 Jul 26 13:17 memory_monitor_summary.json
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc   1593052 Jul 26 13:17 agis_ddmendpoints.agis.ALL.json
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc    403934 Jul 26 13:17 log.45743349._021443.job.log.tgz.1
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc        95 Jul 26 13:18 pilot_heartbeat.json
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc      7781 Jul 26 13:19 heartbeat.json
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc       889 Jul 26 13:19 pilotlog.txt
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc   1456658 Jul 26 13:19 log.45743349._021443.job.log.1
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc       357 Jul 26 13:19 output.list
[2025-07-26 18:46:56] -rw-r--r--. 1 boinc boinc       620 Jul 26 13:19 runtime_log
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc   1884160 Jul 26 13:19 result.tar.gz
[2025-07-26 18:46:56] -rw-r--r--. 1 boinc boinc      8674 Jul 26 13:19 runtime_log.err
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc       657 Jul 26 13:19 lQQODmAKXz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdbPLDm08Tu5m.diag
[2025-07-26 18:46:56] -rw-r--r--. 1 boinc boinc      8192 Jul 26 18:46 boinc_mmap_file
[2025-07-26 18:46:56] -rw-r--r--. 1 boinc boinc        28 Jul 26 18:46 wrapper_checkpoint.txt
[2025-07-26 18:46:56] -rw-r--r--. 1 boinc boinc     20561 Jul 26 18:46 stderr.txt
[2025-07-26 18:46:56] HITS file was successfully produced:
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc 212090217 Jul 26 13:16 shared/HITS.pool.root.1
[2025-07-26 18:46:56]  *** Contents of shared directory: ***
[2025-07-26 18:46:56] total 433500
[2025-07-26 18:46:56] -rw-r--r--. 2 boinc boinc 229363971 Jul 26 08:36 ATLAS.root_0
[2025-07-26 18:46:56] -rw-r--r--. 2 boinc boinc     15095 Jul 26 08:36 start_atlas.sh
[2025-07-26 18:46:56] -rw-r--r--. 2 boinc boinc    542895 Jul 26 08:36 input.tar.gz
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc 212090217 Jul 26 13:16 HITS.pool.root.1
[2025-07-26 18:46:56] -rw-------. 1 boinc boinc   1884160 Jul 26 13:19 result.tar.gz
18:46:58 (5563): run_atlas exited; CPU time 63086.060165
18:46:58 (5563): called boinc_finish(0)

</stderr_txt>
]]>

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