Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:51:36 (44636): wrapper (7.7.26015): starting
11:51:36 (44636): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 11:51:36] Arguments: --nthreads 8
[2025-07-25 11:51:36] Threads: 8
[2025-07-25 11:51:36] Checking for CVMFS
[2025-07-25 11:51:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 11:51:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 11:51:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 11:51:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 11:51:36] 2.13.0.0 654572 15704 371048 148746 3 689 32701914 32935936 21662 16776704 0 81132691 99.600 127168537 20141 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 11:51:36] CVMFS is ok
[2025-07-25 11:51:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 11:51:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 11:51:36] Further information can be found at the LHC@home message board.
[2025-07-25 11:51:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 11:51:36] Checking for apptainer binary...
[2025-07-25 11:51:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 11:51:36] Running /usr/bin/apptainer --version
[2025-07-25 11:51:36] apptainer version 1.4.1-1.el9
[2025-07-25 11:51:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 11:51:36] c7-3-28.aglt2.org
[2025-07-25 11:51:36] apptainer works
[2025-07-25 11:51:36] Set ATHENA_PROC_NUMBER=8
[2025-07-25 11:51:36] Set ATHENA_CORE_NUMBER=8
[2025-07-25 11:51:36] Starting ATLAS job with PandaID=6744979072
[2025-07-25 11:51:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 13:26:34]  *** The last 200 lines of the pilot log: ***
[2025-07-25 13:26:34]  lfn=log.45743349._019179.job.log.tgz.1
[2025-07-25 13:26:34]  mtime=0
[2025-07-25 13:26:34]  protocol_id=None
[2025-07-25 13:26:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 13:26:34]  replicas=None
[2025-07-25 13:26:34]  scope=mc23_13p6TeV
[2025-07-25 13:26:34]  status=None
[2025-07-25 13:26:34]  status_code=0
[2025-07-25 13:26:34]  storage_token=
[2025-07-25 13:26:34]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6744979072/log.45743349._019179.job.log.tgz.1
[2025-07-25 13:26:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/c2/log.45743349._019179.job.log.tgz.1
[2025-07-25 13:26:34]  workdir=None
[2025-07-25 13:26:34] ]
[2025-07-25 13:26:34] 2025-07-25 17:25:53,487 | INFO     | transferring file log.45743349._019179.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6744979072/log.45743349._019179.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 13:26:34] 2025-07-25 17:25:53,487 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6744979072/log.45743349._019179.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._019179.job
[2025-07-25 13:26:34] 2025-07-25 17:25:53,519 | INFO     | adding to output.list: log.45743349._019179.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/c2/log.45743349._019179.job.log.tg
[2025-07-25 13:26:34] 2025-07-25 17:25:53,520 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 13:26:34] 2025-07-25 17:25:53,520 | INFO     | summary of transferred files:
[2025-07-25 13:26:34] 2025-07-25 17:25:53,520 | INFO     |  -- lfn=log.45743349._019179.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 13:26:34] 2025-07-25 17:25:53,520 | INFO     | stage-out finished correctly
[2025-07-25 13:26:34] 2025-07-25 17:25:53,600 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 13:26:34] 2025-07-25 17:25:53,806 | INFO     | job 6744979072 has state=finished
[2025-07-25 13:26:34] 2025-07-25 17:25:53,806 | INFO     | preparing for final server update for job 6744979072 in state='finished'
[2025-07-25 13:26:34] 2025-07-25 17:25:53,806 | INFO     | this job has now completed (state=finished)
[2025-07-25 13:26:34] 2025-07-25 17:25:53,806 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 13:26:34] 2025-07-25 17:25:53,807 | INFO     | log transfer has been attempted: DONE
[2025-07-25 13:26:34] 2025-07-25 17:25:53,808 | INFO     | job 6744979072 has finished - writing final server update
[2025-07-25 13:26:34] 2025-07-25 17:25:53,808 | INFO     | total number of processed events: 400 (read)
[2025-07-25 13:26:34] 2025-07-25 17:25:53,819 | INFO     | executing command: lscpu
[2025-07-25 13:26:34] 2025-07-25 17:25:53,912 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 13:26:34] 2025-07-25 17:25:54,912 | INFO     | monitor loop #371: job 0:6744979072 is in state 'finished'
[2025-07-25 13:26:34] 2025-07-25 17:25:54,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 13:26:34] 2025-07-25 17:25:57,418 | INFO     | monitor loop #372: job 0:6744979072 is in state 'finished'
[2025-07-25 13:26:34] 2025-07-25 17:25:57,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 13:26:34] 2025-07-25 17:25:59,922 | INFO     | monitor loop #373: job 0:6744979072 is in state 'finished'
[2025-07-25 13:26:34] 2025-07-25 17:25:59,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 13:26:34] 2025-07-25 17:26:01,516 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 13:26:34] 2025-07-25 17:26:01,533 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3065.5693958333327
[2025-07-25 13:26:34] 2025-07-25 17:26:01,549 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6744979072/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 13:26:34] 2025-07-25 17:26:01,550 | INFO     | extracted standard info from prmon json
[2025-07-25 13:26:34] 2025-07-25 17:26:01,550 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 13:26:34] 2025-07-25 17:26:01,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 13:26:34] 2025-07-25 17:26:01,551 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 13:26:34] 2025-07-25 17:26:01,551 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 13:26:34] 2025-07-25 17:26:01,553 | INFO     | fitting pss+swap vs Time
[2025-07-25 13:26:34] 2025-07-25 17:26:01,553 | INFO     | sum of square deviations: 190403570.0
[2025-07-25 13:26:34] 2025-07-25 17:26:01,554 | INFO     | sum of deviations: -12006268758.000004
[2025-07-25 13:26:34] 2025-07-25 17:26:01,554 | INFO     | mean x: 1753461610.0
[2025-07-25 13:26:34] 2025-07-25 17:26:01,554 | INFO     | mean y: 2336700.294117647
[2025-07-25 13:26:34] 2025-07-25 17:26:01,554 | INFO     | -- intersect: 110570281127.46733
[2025-07-25 13:26:34] 2025-07-25 17:26:01,554 | INFO     | intersect: 110570281127.46733
[2025-07-25 13:26:34] 2025-07-25 17:26:01,554 | INFO     | chi2: 0.1912327510439718
[2025-07-25 13:26:34] 2025-07-25 17:26:01,554 | INFO     | -- intersect: 110570281127.46733
[2025-07-25 13:26:34] 2025-07-25 17:26:01,555 | INFO     | current memory leak: -63.06 B/s (using 85 data points, chi2=0.19)
[2025-07-25 13:26:34] 2025-07-25 17:26:01,555 | INFO     | could have reported an average CPU frequency of 3139 MHz (7 samples)
[2025-07-25 13:26:34] 2025-07-25 17:26:01,555 | INFO     | ..............................
[2025-07-25 13:26:34] 2025-07-25 17:26:01,555 | INFO     | . Timing measurements:
[2025-07-25 13:26:34] 2025-07-25 17:26:01,555 | INFO     | . get job = 0 s
[2025-07-25 13:26:34] 2025-07-25 17:26:01,555 | INFO     | . initial setup = 2 s
[2025-07-25 13:26:34] 2025-07-25 17:26:01,555 | INFO     | . payload setup = 9 s
[2025-07-25 13:26:34] 2025-07-25 17:26:01,555 | INFO     | . stage-in = 0 s
[2025-07-25 13:26:34] 2025-07-25 17:26:01,556 | INFO     | . payload execution = 5611 s
[2025-07-25 13:26:34] 2025-07-25 17:26:01,556 | INFO     | . stage-out = 0 s
[2025-07-25 13:26:34] 2025-07-25 17:26:01,556 | INFO     | . log creation = 0 s
[2025-07-25 13:26:34] 2025-07-25 17:26:01,556 | INFO     | ..............................
[2025-07-25 13:26:34] 2025-07-25 17:26:01,782 | INFO     | 
[2025-07-25 13:26:34] 2025-07-25 17:26:01,782 | INFO     | job summary report
[2025-07-25 13:26:34] 2025-07-25 17:26:01,782 | INFO     | --------------------------------------------------
[2025-07-25 13:26:34] 2025-07-25 17:26:01,782 | INFO     | PanDA job id: 6744979072
[2025-07-25 13:26:34] 2025-07-25 17:26:01,782 | INFO     | task id: 45743349
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | errors: (none)
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | pilot state: finished 
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | transexitcode: 0
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | exeerrorcode: 0
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | exeerrordiag: 
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | exitcode: 0
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | exitmsg: OK
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | cpuconsumptiontime: 37212 s
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | nevents: 400
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | neventsw: 0
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | pid: 62948
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | pgrp: 62948
[2025-07-25 13:26:34] 2025-07-25 17:26:01,783 | INFO     | corecount: 8
[2025-07-25 13:26:34] 2025-07-25 17:26:01,784 | INFO     | event service: False
[2025-07-25 13:26:34] 2025-07-25 17:26:01,784 | INFO     | sizes: {0: 2397473, 7: 2397735, 11: 2397763, 5624: 2424328, 5626: 2433382, 5634: 2433520}
[2025-07-25 13:26:34] 2025-07-25 17:26:01,785 | INFO     | --------------------------------------------------
[2025-07-25 13:26:34] 2025-07-25 17:26:01,785 | INFO     | 
[2025-07-25 13:26:34] 2025-07-25 17:26:01,785 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-25 13:26:34] 2025-07-25 17:26:01,833 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,834 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,834 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,834 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,835 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,836 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,836 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,836 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,836 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 13:26:34] 2025-07-25 17:26:01,836 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,836 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 13:26:34] 2025-07-25 17:26:01,836 | INFO     | job 6744979072 has completed (purged errors)
[2025-07-25 13:26:34] 2025-07-25 17:26:01,836 | INFO     | overall cleanup function is called
[2025-07-25 13:26:34] 2025-07-25 17:26:02,847 | INFO     | --- collectZombieJob: --- 10, [62948]
[2025-07-25 13:26:34] 2025-07-25 17:26:02,847 | INFO     | zombie collector waiting for pid 62948
[2025-07-25 13:26:34] 2025-07-25 17:26:02,847 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 13:26:34] 2025-07-25 17:26:02,847 | INFO     | collected zombie processes
[2025-07-25 13:26:34] 2025-07-25 17:26:02,847 | INFO     | will attempt to kill all subprocesses of pid=62948
[2025-07-25 13:26:34] 2025-07-25 17:26:03,346 | INFO     | process IDs to be killed: [62948] (in reverse order)
[2025-07-25 13:26:34] 2025-07-25 17:26:03,520 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 13:26:34] 2025-07-25 17:26:03,520 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 13:26:34] 2025-07-25 17:26:03,545 | INFO     | did not find any defunct processes belonging to 62948
[2025-07-25 13:26:34] 2025-07-25 17:26:03,566 | INFO     | did not find any defunct processes belonging to 62948
[2025-07-25 13:26:34] 2025-07-25 17:26:03,567 | INFO     | ready for new job
[2025-07-25 13:26:34] 2025-07-25 17:26:03,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 13:26:34] 2025-07-25 17:26:03,569 | INFO     | ***************************************
[2025-07-25 13:26:34] 2025-07-25 17:26:03,569 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 13:26:34] 2025-07-25 17:26:03,569 | INFO     | ***************************************
[2025-07-25 13:26:34] 2025-07-25 17:26:03,569 | INFO     | 
[2025-07-25 13:26:34] 2025-07-25 17:26:03,589 | INFO     | architecture information:
[2025-07-25 13:26:34] 2025-07-25 17:26:03,589 | INFO     | executing command: cat /etc/os-release
[2025-07-25 13:26:34] 2025-07-25 17:26:03,609 | INFO     | cat /etc/os-release:
[2025-07-25 13:26:34] NAME="CentOS Linux"
[2025-07-25 13:26:34] VERSION="7 (Core)"
[2025-07-25 13:26:34] ID="centos"
[2025-07-25 13:26:34] ID_LIKE="rhel fedora"
[2025-07-25 13:26:34] VERSION_ID="7"
[2025-07-25 13:26:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 13:26:34] ANSI_COLOR="0;31"
[2025-07-25 13:26:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 13:26:34] HOME_URL="https://www.centos.org/"
[2025-07-25 13:26:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 13:26:34] 
[2025-07-25 13:26:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 13:26:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 13:26:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 13:26:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 13:26:34] 
[2025-07-25 13:26:34] 2025-07-25 17:26:03,609 | INFO     | ***************************************
[2025-07-25 13:26:34] 2025-07-25 17:26:04,113 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-25 13:26:34] 2025-07-25 17:26:04,141 | INFO     | sufficient remaining disk space (75906416640 B)
[2025-07-25 13:26:34] 2025-07-25 17:26:04,141 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 13:26:34] 2025-07-25 17:26:04,141 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 13:26:34] 2025-07-25 17:26:04,142 | INFO     | update_server=False
[2025-07-25 13:26:34] 2025-07-25 17:26:04,142 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 13:26:34] 2025-07-25 17:26:04,142 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 13:26:34] 2025-07-25 17:26:04,143 | INFO     | aborting loop
[2025-07-25 13:26:34] 2025-07-25 17:26:04,153 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 13:26:34] 2025-07-25 17:26:04,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 13:26:34] 2025-07-25 17:26:04,799 | INFO     | all payload control threads have been joined
[2025-07-25 13:26:34] 2025-07-25 17:26:05,075 | INFO     | all data control threads have been joined
[2025-07-25 13:26:34] 2025-07-25 17:26:05,147 | INFO     | [job] retrieve thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:05,149 | INFO     | [job] job monitor thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:05,260 | INFO     | [data] copytool_in thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:05,288 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:05,558 | INFO     | all job control threads have been joined
[2025-07-25 13:26:34] 2025-07-25 17:26:05,735 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:05,804 | INFO     | [payload] control thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:05,896 | INFO     | [payload] validate_post thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:06,081 | INFO     | [data] control thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:06,161 | INFO     | [data] copytool_out thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:06,220 | INFO     | [payload] failed_post thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:06,514 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:06,526 | INFO     | [job] validate thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:06,565 | INFO     | [job] control thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:06,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 13:26:34] 2025-07-25 17:26:07,669 | INFO     | [job] queue monitor thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:08,340 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:14,652 | INFO     | job.realtimelogging is not enabled
[2025-07-25 13:26:34] 2025-07-25 17:26:15,662 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 13:26:34] 2025-07-25 17:26:16,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858277758784)>', '<ExcThread(monitor, started 139857926010624)>']
[2025-07-25 13:26:34] 2025-07-25 17:26:21,762 | INFO     | all workflow threads have been joined
[2025-07-25 13:26:34] 2025-07-25 17:26:21,762 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 13:26:34] 2025-07-25 17:26:21,762 | INFO     | traces error code: 0
[2025-07-25 13:26:34] 2025-07-25 17:26:21,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 13:26:34] 2025-07-25 17:26:33,964 | INFO     | PID=51799 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 13:26:34] 2025-07-25 17:26:33,964 | INFO     | .. there are 27 such processes running
[2025-07-25 13:26:34] 2025-07-25 17:26:33,965 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 13:26:34] 2025-07-25 17:26:33,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 13:26:34] 2025-07-25 17:26:33,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 13:26:34] 2025-07-25 17:26:33,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 13:26:34] 2025-07-25 17:26:33,965 | INFO     | [monitor] control thread has ended
[2025-07-25 13:26:34] 2025-07-25 17:26:34,137 [wrapper] ==== pilot stdout END ====
[2025-07-25 13:26:34] 2025-07-25 17:26:34,143 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 13:26:34] 2025-07-25 17:26:34,146 [wrapper] pilotpid: 51799
[2025-07-25 13:26:34] 2025-07-25 17:26:34,150 [wrapper] Pilot exit status: 0
[2025-07-25 13:26:34] 2025-07-25 17:26:34,175 [wrapper] pandaids: 6744979072
[2025-07-25 13:26:34] 2025-07-25 17:26:34,372 [wrapper] cleanup supervisor_pilot  690575 51800
[2025-07-25 13:26:34] 2025-07-25 17:26:34,375 [wrapper] Test setup, not cleaning
[2025-07-25 13:26:34] 2025-07-25 17:26:34,395 [wrapper] apfmon messages muted
[2025-07-25 13:26:34] 2025-07-25 17:26:34,426 [wrapper] ==== wrapper stdout END ====
[2025-07-25 13:26:34] 2025-07-25 17:26:34,429 [wrapper] ==== wrapper stderr END ====
[2025-07-25 13:26:34]  *** Error codes and diagnostics ***
[2025-07-25 13:26:34]     "exeErrorCode": 0,
[2025-07-25 13:26:34]     "exeErrorDiag": "",
[2025-07-25 13:26:34]     "pilotErrorCode": 0,
[2025-07-25 13:26:34]     "pilotErrorDiag": "",
[2025-07-25 13:26:34]  *** Listing of results directory ***
[2025-07-25 13:26:34] total 347780
[2025-07-25 13:26:34] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 05:16 pilot3.tar.gz
[2025-07-25 13:26:34] -rwx------. 1 boincer umatlas     36292 Jul 25 05:28 runpilot2-wrapper.sh
[2025-07-25 13:26:34] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 05:28 queuedata.json
[2025-07-25 13:26:34] -rw-r--r--. 1 boincer umatlas       100 Jul 25 11:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 13:26:34] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 11:51 run_atlas
[2025-07-25 13:26:34] -rw-r--r--. 1 boincer umatlas       105 Jul 25 11:51 job.xml
[2025-07-25 13:26:34] -rw-r--r--. 2 boincer umatlas 141246481 Jul 25 11:51 EVNT.45743347._000996.pool.root.1
[2025-07-25 13:26:34] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 11:51 start_atlas.sh
[2025-07-25 13:26:34] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 11:51 shared
[2025-07-25 13:26:34] -rw-r--r--. 2 boincer umatlas    542897 Jul 25 11:51 input.tar.gz
[2025-07-25 13:26:34] -rw-r--r--. 1 boincer umatlas         0 Jul 25 11:51 boinc_lockfile
[2025-07-25 13:26:34] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 11:51 pandaJob.out
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas    979317 Jul 25 11:51 agis_schedconf.cvmfs.json
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas   1593052 Jul 25 11:51 agis_ddmendpoints.agis.ALL.json
[2025-07-25 13:26:34] drwx------. 4 boincer umatlas      4096 Jul 25 11:51 pilot3
[2025-07-25 13:26:34] -rw-r--r--. 1 boincer umatlas      6933 Jul 25 13:18 init_data.xml
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas 209337249 Jul 25 13:25 HITS.45743349._019179.pool.root.1
[2025-07-25 13:26:34] -rw-r--r--. 1 boincer umatlas       529 Jul 25 13:25 boinc_task_state.xml
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas      1038 Jul 25 13:25 memory_monitor_summary.json
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas    317163 Jul 25 13:25 log.45743349._019179.job.log.tgz.1
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas      7777 Jul 25 13:26 heartbeat.json
[2025-07-25 13:26:34] -rw-r--r--. 1 boincer umatlas        27 Jul 25 13:26 wrapper_checkpoint.txt
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas       821 Jul 25 13:26 pilotlog.txt
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas        95 Jul 25 13:26 pilot_heartbeat.json
[2025-07-25 13:26:34] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 13:26 boinc_mmap_file
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas    516492 Jul 25 13:26 log.45743349._019179.job.log.1
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas       357 Jul 25 13:26 output.list
[2025-07-25 13:26:34] -rw-r--r--. 1 boincer umatlas       620 Jul 25 13:26 runtime_log
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas    849920 Jul 25 13:26 result.tar.gz
[2025-07-25 13:26:34] -rw-r--r--. 1 boincer umatlas      8655 Jul 25 13:26 runtime_log.err
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas       653 Jul 25 13:26 lHmKDmFuTz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSlyKDmIRvBXn.diag
[2025-07-25 13:26:34] -rw-r--r--. 1 boincer umatlas     21622 Jul 25 13:26 stderr.txt
[2025-07-25 13:26:34] HITS file was successfully produced:
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas 209337249 Jul 25 13:25 shared/HITS.pool.root.1
[2025-07-25 13:26:34]  *** Contents of shared directory: ***
[2025-07-25 13:26:34] total 343756
[2025-07-25 13:26:34] -rw-r--r--. 2 boincer umatlas 141246481 Jul 25 11:51 ATLAS.root_0
[2025-07-25 13:26:34] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 11:51 start_atlas.sh
[2025-07-25 13:26:34] -rw-r--r--. 2 boincer umatlas    542897 Jul 25 11:51 input.tar.gz
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas 209337249 Jul 25 13:25 HITS.pool.root.1
[2025-07-25 13:26:34] -rw-------. 1 boincer umatlas    849920 Jul 25 13:26 result.tar.gz
13:26:56 (44636): run_atlas exited; CPU time 37426.439730
13:26:56 (44636): called boinc_finish(0)

</stderr_txt>
]]>

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