Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-25 23:00:02 (52118): Detected: vboxwrapper 26206
2025-07-25 23:00:02 (52118): Detected: BOINC client v8.2.5
2025-07-25 23:00:03 (52118): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-07-25 23:00:03 (52118): Detected: Sandbox Configuration Enabled
2025-07-25 23:00:03 (52118): Successfully copied 'init_data.xml' to the shared directory.
2025-07-25 23:00:03 (52118): Create VM. (boinc_450f23453919a0ea, slot#3)
2025-07-25 23:00:03 (52118): Setting Memory Size for VM. (4400MB)
2025-07-25 23:00:03 (52118): Setting CPU Count for VM. (4)
2025-07-25 23:00:03 (52118): Setting Chipset Options for VM.
2025-07-25 23:00:03 (52118): Setting Graphics Controller Options for VM.
2025-07-25 23:00:03 (52118): Setting Boot Options for VM.
2025-07-25 23:00:03 (52118): Setting Network Configuration for NAT.
2025-07-25 23:00:03 (52118): Enabling VM Network Access.
2025-07-25 23:00:04 (52118): Disabling USB Support for VM.
2025-07-25 23:00:04 (52118): Disabling COM Port Support for VM.
2025-07-25 23:00:04 (52118): Disabling Audio Support for VM.
2025-07-25 23:00:04 (52118): Disabling Clipboard Support for VM.
2025-07-25 23:00:04 (52118): Disabling Drag and Drop Support for VM.
2025-07-25 23:00:04 (52118): Adding storage controller(s) to VM.
2025-07-25 23:00:04 (52118): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-25 23:00:05 (52118): Adding VirtualBox Guest Additions to VM.
2025-07-25 23:00:05 (52118): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-25 23:00:05 (52118): forwarding host port 61529 to guest port 80
2025-07-25 23:00:05 (52118): Enabling remote desktop for VM.
2025-07-25 23:00:05 (52118): Required extension pack not installed, remote desktop not enabled.
2025-07-25 23:00:05 (52118): Enabling shared directory for VM.
2025-07-25 23:00:05 (52118): Starting VM using VBoxManage interface. (boinc_450f23453919a0ea, slot#3)
2025-07-25 23:00:10 (52118): Successfully started VM. (PID = '52190')
2025-07-25 23:00:10 (52118): Reporting VM Process ID to BOINC.
2025-07-25 23:00:10 (52118): Guest Log: BIOS: VirtualBox 7.1.8
2025-07-25 23:00:10 (52118): Guest Log: CPUID EDX: 0x178bfbff
2025-07-25 23:00:10 (52118): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-25 23:00:10 (52118): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-25 23:00:10 (52118): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-25 23:00:10 (52118): Detected: Web Application Enabled (http://localhost:61529)
2025-07-25 23:00:11 (52118): VM state change detected. (old = 'running', new = 'paused')
2025-07-25 23:00:27 (52118): Preference change detected
2025-07-25 23:00:27 (52118): Setting CPU throttle for VM. (50%)
2025-07-25 23:00:27 (52118): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-25 23:00:28 (52118): VM state change detected. (old = 'paused', new = 'running')
2025-07-25 23:00:29 (52118): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-25 23:00:29 (52118): Guest Log: BIOS: Booting from Hard Disk...
2025-07-25 23:00:32 (52118): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-25 23:00:32 (52118): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-25 23:00:32 (52118): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-25 23:00:40 (52118): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-25 23:00:40 (52118): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-25 23:00:53 (52118): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-25 23:00:53 (52118): Guest Log: 00:00:00.000188 main     Log opened 2025-07-25T21:00:34.194311000Z
2025-07-25 23:00:53 (52118): Guest Log: 00:00:00.000309 main     OS Product: Linux
2025-07-25 23:00:53 (52118): Guest Log: 00:00:00.000364 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-25 23:00:53 (52118): Guest Log: 00:00:00.000431 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-25 23:00:53 (52118): Guest Log: 00:00:00.000495 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-25 23:00:53 (52118): Guest Log: 00:00:00.000496 main     Process ID: 1304
2025-07-25 23:00:53 (52118): Guest Log: 00:00:00.000497 main     Package type: LINUX_64BITS_GENERIC
2025-07-25 23:00:53 (52118): Guest Log: 00:00:00.002901 main     5.2.32 r132073 started. Verbose level = 0
2025-07-25 23:01:10 (52118): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-25 23:01:10 (52118): Guest Log: [INFO] Mounting shared directory
2025-07-25 23:01:10 (52118): Guest Log: [INFO] Checking for init_data.xml
2025-07-25 23:02:05 (52118): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-25 23:02:05 (52118): Guest Log: [INFO] Detected branch: prod
2025-07-25 23:02:11 (52118): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-25 23:02:11 (52118): Guest Log: Copying input files
2025-07-25 23:02:14 (52118): Guest Log: Copied input files into RunAtlas.
2025-07-25 23:02:14 (52118): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-25 23:02:14 (52118): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-25 23:02:14 (52118): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-25 23:02:14 (52118): Guest Log: Further information can be found at the LHC@home message board.
2025-07-25 23:03:07 (52118): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-25 23:03:13 (52118): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-25 23:03:13 (52118): Guest Log: 2.6.3.0 1624 1 30160 148752 3 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-25 23:03:13 (52118): Guest Log: copied the webapp to /var/www
2025-07-25 23:03:13 (52118): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-25 23:03:13 (52118): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-25 23:03:19 (52118): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-25 23:03:19 (52118): Guest Log:  *** Starting ATLAS job. (PandaID=6744979113 taskID=45743349) ***
2025-07-25 23:15:14 (52118): VM state change detected. (old = 'running', new = 'paused')
2025-07-25 23:15:35 (52118): VM state change detected. (old = 'paused', new = 'running')
2025-07-25 23:26:28 (52118): VM state change detected. (old = 'running', new = 'paused')
2025-07-25 23:26:49 (52118): VM state change detected. (old = 'paused', new = 'running')
2025-07-25 23:33:48 (52118): VM state change detected. (old = 'running', new = 'paused')
2025-07-25 23:33:49 (52118): VM state change detected. (old = 'paused', new = 'running')
2025-07-26 00:00:35 (52118): VM state change detected. (old = 'running', new = 'paused')
2025-07-26 00:00:55 (52118): VM state change detected. (old = 'paused', new = 'running')
2025-07-26 00:09:49 (52118): VM state change detected. (old = 'running', new = 'paused')
2025-07-26 00:10:10 (52118): VM state change detected. (old = 'paused', new = 'running')
2025-07-26 00:41:24 (52118): Status Report: Elapsed Time: '6000.000000'
2025-07-26 00:41:24 (52118): Status Report: CPU Time: '15511.610000'
2025-07-26 00:58:36 (52118): VM state change detected. (old = 'running', new = 'paused')
2025-07-26 00:58:56 (52118): VM state change detected. (old = 'paused', new = 'running')
2025-07-26 01:27:44 (52118): VM state change detected. (old = 'running', new = 'paused')
2025-07-26 13:16:12 (52118): VM state change detected. (old = 'paused', new = 'running')
2025-07-26 13:16:17 (52118): VM state change detected. (old = 'running', new = 'paused')
2025-07-26 13:16:18 (52118): VM state change detected. (old = 'paused', new = 'running')
2025-07-26 13:16:21 (52118): Guest Log: 02:24:49.898383 timesync vgsvcTimeSyncWorker: Radical host time change: 42 571 508 000 000ns (HostNow=1 753 528 580 096 000 000 ns HostLast=1 753 486 008 588 000 000 ns)
2025-07-26 13:16:31 (52118): Guest Log: 02:24:59.926037 timesync vgsvcTimeSyncWorker: Radical guest time change: 42 666 115 430 000ns (GuestNow=1 753 528 590 165 778 000 ns GuestLast=1 753 485 924 050 348 000 ns fSetTimeLastLoop=true )
2025-07-26 14:10:04 (52118): Status Report: Elapsed Time: '12000.000000'
2025-07-26 14:10:04 (52118): Status Report: CPU Time: '35541.850000'
2025-07-26 14:23:30 (52118): Guest Log:  *** Job finished ***
2025-07-26 14:23:30 (52118): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:22:51,121 | INFO     | all workflow threads have been joined
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:22:51,121 | INFO     | end of generic workflow (traces error code: 0)
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:22:51,121 | INFO     | traces error code: 0
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:22:51,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:10,807 | INFO     | PID=5965 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:10,808 | INFO     | found 0 job(s) in 20 queues
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:10,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:10,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:10,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:10,809 | INFO     | [monitor] control thread has ended
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:10,942 [wrapper] ==== pilot stdout END ====
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:10,949 [wrapper] ==== wrapper stdout RESUME ====
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:11,034 [wrapper] pilotpid: 5965
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:11,042 [wrapper] Pilot exit status: 0
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:11,612 [wrapper] pandaids: 6744979113
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:11,651 [wrapper] cleanup supervisor_pilot 11097 5966
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:11,659 [wrapper] Test setup, not cleaning
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:11,667 [wrapper] apfmon messages muted
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:11,674 [wrapper] ==== wrapper stdout END ====
2025-07-26 14:23:30 (52118): Guest Log: 2025-07-26 12:23:11,680 [wrapper] ==== wrapper stderr END ====
2025-07-26 14:23:30 (52118): Guest Log:  *** Error codes and diagnostics ***
2025-07-26 14:23:30 (52118): Guest Log:     "exeErrorCode": 0,
2025-07-26 14:23:30 (52118): Guest Log:     "exeErrorDiag": "",
2025-07-26 14:23:30 (52118): Guest Log:     "pilotErrorCode": 0,
2025-07-26 14:23:30 (52118): Guest Log:     "pilotErrorDiag": "",
2025-07-26 14:23:30 (52118): Guest Log:  *** Listing of results directory ***
2025-07-26 14:23:31 (52118): Guest Log: total 212748
2025-07-26 14:23:31 (52118): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 25 09:31 pilot3.tar.gz
2025-07-26 14:23:31 (52118): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 25 09:31 queuedata.json
2025-07-26 14:23:31 (52118): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 25 09:32 runpilot2-wrapper.sh
2025-07-26 14:23:31 (52118): Guest Log: -rw-r-----. 1 atlas atlas     15095 Jul 25 21:01 start_atlas.sh
2025-07-26 14:23:31 (52118): Guest Log: -rw-r-----. 1 atlas atlas    542891 Jul 25 21:01 input.tar.gz
2025-07-26 14:23:31 (52118): Guest Log: -rw-r--r--. 1 atlas atlas      8216 Jul 25 21:01 init_data.xml
2025-07-26 14:23:31 (52118): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 25 21:01 EVNT.45743347._000999.pool.root.1 -> /data/./ATLAS.root_0
2025-07-26 14:23:31 (52118): Guest Log: -rw-r--r--. 1 atlas atlas      2562 Jul 25 21:03 pandaJob.out
2025-07-26 14:23:31 (52118): Guest Log: -rw-------. 1 atlas atlas    979993 Jul 25 21:07 agis_schedconf.cvmfs.json
2025-07-26 14:23:31 (52118): Guest Log: drwx------. 4 atlas atlas      4096 Jul 25 21:07 pilot3
2025-07-26 14:23:31 (52118): Guest Log: -rw-------. 1 atlas atlas 211722551 Jul 26 12:18 HITS.45743349._019220.pool.root.1
2025-07-26 14:23:31 (52118): Guest Log: -rw-------. 1 atlas atlas      1034 Jul 26 12:19 memory_monitor_summary.json
2025-07-26 14:23:31 (52118): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 26 12:19 agis_ddmendpoints.agis.ALL.json
2025-07-26 14:23:31 (52118): Guest Log: -rw-------. 1 atlas atlas    290821 Jul 26 12:19 log.45743349._019220.job.log.tgz.1
2025-07-26 14:23:31 (52118): Guest Log: -rw-------. 1 atlas atlas      7794 Jul 26 12:22 heartbeat.json
2025-07-26 14:23:31 (52118): Guest Log: -rw-------. 1 atlas atlas       744 Jul 26 12:23 pilotlog.txt
2025-07-26 14:23:31 (52118): Guest Log: -rw-------. 1 atlas atlas        98 Jul 26 12:23 pilot_heartbeat.json
2025-07-26 14:23:31 (52118): Guest Log: -rw-------. 1 atlas atlas    868260 Jul 26 12:23 log.45743349._019220.job.log.1
2025-07-26 14:23:31 (52118): Guest Log: -rw-------. 1 atlas atlas       357 Jul 26 12:23 output.list
2025-07-26 14:23:31 (52118): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 26 12:23 runtime_log
2025-07-26 14:23:31 (52118): Guest Log: -rw-------. 1 atlas atlas   1177600 Jul 26 12:23 result.tar.gz
2025-07-26 14:23:31 (52118): Guest Log: -rw-------. 1 atlas atlas       661 Jul 26 12:23 sMSMDmAyTz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfDPLDmFSgnwm.diag
2025-07-26 14:23:31 (52118): Guest Log: -rw-r--r--. 1 atlas atlas      8596 Jul 26 12:23 runtime_log.err
2025-07-26 14:23:31 (52118): Guest Log: Looking for outputfile HITS.45743349._019220.pool.root.1
2025-07-26 14:23:31 (52118): Guest Log: HITS file was successfully produced
2025-07-26 14:23:31 (52118): Guest Log: -rw-------. 1 atlas atlas 211722551 Jul 26 12:18 /home/atlas/RunAtlas/HITS.45743349._019220.pool.root.1
2025-07-26 14:23:31 (52118): Guest Log: Successfully finished the ATLAS job!
2025-07-26 14:23:31 (52118): Guest Log: Copying the results back to the shared directory!
2025-07-26 14:23:32 (52118): Guest Log:  *** Contents of shared directory: ***
2025-07-26 14:23:32 (52118): Guest Log: total 142624
2025-07-26 14:23:32 (52118): Guest Log: -rw-rw----. 1 root root 144290989 Jul 25 21:00 ATLAS.root_0
2025-07-26 14:23:32 (52118): Guest Log: -rw-rw-r--. 1 root root      8216 Jul 25 21:00 init_data.xml
2025-07-26 14:23:32 (52118): Guest Log: -rw-rw----. 1 root root    542891 Jul 25 21:00 input.tar.gz
2025-07-26 14:23:32 (52118): Guest Log: -rw-r--r--. 1 root root   1177600 Jul 26  2025 result.tar.gz
2025-07-26 14:23:32 (52118): Guest Log: -rw-rw----. 1 root root     15095 Jul 25 21:00 start_atlas.sh
2025-07-26 14:23:33 (52118): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-26 14:23:33 (52118): VM Completion File Detected.
2025-07-26 14:23:33 (52118): Powering off VM.
2025-07-26 14:23:34 (52118): Successfully stopped VM.
2025-07-26 14:23:34 (52118): Deregistering VM. (boinc_450f23453919a0ea, slot#3)
2025-07-26 14:23:34 (52118): Removing network bandwidth throttle group from VM.
2025-07-26 14:23:34 (52118): Removing VM from VirtualBox.
14:23:39 (52118): called boinc_finish(0)

</stderr_txt>
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