Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:38:18 (703502): wrapper (7.7.26015): starting
11:38:18 (703502): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 11:38:18] Arguments: --nthreads 8
[2025-07-25 11:38:18] Threads: 8
[2025-07-25 11:38:18] Checking for CVMFS
[2025-07-25 11:38:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 11:38:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 11:38:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 11:38:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 11:38:19] 2.13.0.0 3724680 16256 225812 148746 0 404 29612279 32935937 24323 16776704 0 78241089 99.516 116236746 20185 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 11:38:19] CVMFS is ok
[2025-07-25 11:38:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 11:38:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 11:38:19] Further information can be found at the LHC@home message board.
[2025-07-25 11:38:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 11:38:19] Checking for apptainer binary...
[2025-07-25 11:38:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 11:38:19] Running /usr/bin/apptainer --version
[2025-07-25 11:38:19] apptainer version 1.4.1-1.el9
[2025-07-25 11:38:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 11:38:20] c7-4-31.aglt2.org
[2025-07-25 11:38:20] apptainer works
[2025-07-25 11:38:20] Set ATHENA_PROC_NUMBER=8
[2025-07-25 11:38:20] Set ATHENA_CORE_NUMBER=8
[2025-07-25 11:38:20] Starting ATLAS job with PandaID=6744979007
[2025-07-25 11:38:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 14:58:59]  *** The last 200 lines of the pilot log: ***
[2025-07-25 14:58:59] 2025-07-25 18:58:23,143 | INFO     | monitor loop #796: job 0:6744979007 is in state 'finished'
[2025-07-25 14:58:59] 2025-07-25 18:58:23,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 14:58:59] 2025-07-25 18:58:25,652 | INFO     | monitor loop #797: job 0:6744979007 is in state 'finished'
[2025-07-25 14:58:59] 2025-07-25 18:58:25,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 14:58:59] 2025-07-25 18:58:25,755 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 14:58:59] 2025-07-25 18:58:25,762 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2933.3729062499992
[2025-07-25 14:58:59] 2025-07-25 18:58:25,786 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744979007/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 14:58:59] 2025-07-25 18:58:25,787 | INFO     | extracted standard info from prmon json
[2025-07-25 14:58:59] 2025-07-25 18:58:25,787 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 14:58:59] 2025-07-25 18:58:25,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 14:58:59] 2025-07-25 18:58:25,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 14:58:59] 2025-07-25 18:58:25,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 14:58:59] 2025-07-25 18:58:25,790 | INFO     | fitting pss+swap vs Time
[2025-07-25 14:58:59] 2025-07-25 18:58:25,791 | INFO     | sum of square deviations: 2334696008.9183707
[2025-07-25 14:58:59] 2025-07-25 18:58:25,792 | INFO     | sum of deviations: 16788817377.846945
[2025-07-25 14:58:59] 2025-07-25 18:58:25,792 | INFO     | mean x: 1753463908.5204082
[2025-07-25 14:58:59] 2025-07-25 18:58:25,792 | INFO     | mean y: 2132481.913265306
[2025-07-25 14:58:59] 2025-07-25 18:58:25,792 | INFO     | -- intersect: -12607040286.764788
[2025-07-25 14:58:59] 2025-07-25 18:58:25,792 | INFO     | intersect: -12607040286.764788
[2025-07-25 14:58:59] 2025-07-25 18:58:25,792 | INFO     | chi2: 1.4863354684858348
[2025-07-25 14:58:59] 2025-07-25 18:58:25,793 | INFO     | sum of square deviations: 2160535823.9162407
[2025-07-25 14:58:59] 2025-07-25 18:58:25,794 | INFO     | sum of deviations: 18312097791.502613
[2025-07-25 14:58:59] 2025-07-25 18:58:25,794 | INFO     | mean x: 1753463756.0209424
[2025-07-25 14:58:59] 2025-07-25 18:58:25,794 | INFO     | mean y: 2133784.87434555
[2025-07-25 14:58:59] 2025-07-25 18:58:25,794 | INFO     | -- intersect: -14859734932.446121
[2025-07-25 14:58:59] 2025-07-25 18:58:25,794 | INFO     | intersect: -14859734932.446121
[2025-07-25 14:58:59] 2025-07-25 18:58:25,794 | INFO     | chi2: 1.4700746742435815
[2025-07-25 14:58:59] 2025-07-25 18:58:25,794 | INFO     | current chi2=1.4700746742435815 (change=1.0940191219966309 %)
[2025-07-25 14:58:59] 2025-07-25 18:58:25,794 | INFO     | right removable region: 190
[2025-07-25 14:58:59] 2025-07-25 18:58:25,795 | INFO     | sum of square deviations: 2160533383.9162407
[2025-07-25 14:58:59] 2025-07-25 18:58:25,796 | INFO     | sum of deviations: -6692491997.314146
[2025-07-25 14:58:59] 2025-07-25 18:58:25,796 | INFO     | mean x: 1753464061.0209424
[2025-07-25 14:58:59] 2025-07-25 18:58:25,796 | INFO     | mean y: 2152817.0785340313
[2025-07-25 14:58:59] 2025-07-25 18:58:25,796 | INFO     | -- intersect: 5433702397.992375
[2025-07-25 14:58:59] 2025-07-25 18:58:25,796 | INFO     | intersect: 5433702397.992375
[2025-07-25 14:58:59] 2025-07-25 18:58:25,796 | INFO     | chi2: 0.21898280345860918
[2025-07-25 14:58:59] 2025-07-25 18:58:25,797 | INFO     | current chi2=0.21898280345860918 (change=85.26693279534719 %)
[2025-07-25 14:58:59] 2025-07-25 18:58:25,797 | INFO     | sum of square deviations: 1995254646.413987
[2025-07-25 14:58:59] 2025-07-25 18:58:25,798 | INFO     | sum of deviations: -7227110768.607526
[2025-07-25 14:58:59] 2025-07-25 18:58:25,798 | INFO     | mean x: 1753464213.5215054
[2025-07-25 14:58:59] 2025-07-25 18:58:25,798 | INFO     | mean y: 2153254.0268817204
[2025-07-25 14:58:59] 2025-07-25 18:58:25,798 | INFO     | -- intersect: 6353462909.005046
[2025-07-25 14:58:59] 2025-07-25 18:58:25,798 | INFO     | intersect: 6353462909.005046
[2025-07-25 14:58:59] 2025-07-25 18:58:25,798 | INFO     | chi2: 0.17791849663659873
[2025-07-25 14:58:59] 2025-07-25 18:58:25,798 | INFO     | current chi2=0.17791849663659873 (change=18.752297519915615 %)
[2025-07-25 14:58:59] 2025-07-25 18:58:25,799 | INFO     | left removable region: 20
[2025-07-25 14:58:59] 2025-07-25 18:58:25,799 | INFO     | sum of square deviations: 1523389204.494113
[2025-07-25 14:58:59] 2025-07-25 18:58:25,800 | INFO     | sum of deviations: -2326159126.3176484
[2025-07-25 14:58:59] 2025-07-25 18:58:25,800 | INFO     | mean x: 1753464335.5058823
[2025-07-25 14:58:59] 2025-07-25 18:58:25,800 | INFO     | mean y: 2151578.817647059
[2025-07-25 14:58:59] 2025-07-25 18:58:25,800 | INFO     | -- intersect: 2679626944.0602536
[2025-07-25 14:58:59] 2025-07-25 18:58:25,800 | INFO     | intersect: 2679626944.0602536
[2025-07-25 14:58:59] 2025-07-25 18:58:25,800 | INFO     | chi2: 0.14920905252574074
[2025-07-25 14:58:59] 2025-07-25 18:58:25,800 | INFO     | -- intersect: 2679626944.0602536
[2025-07-25 14:58:59] 2025-07-25 18:58:25,801 | INFO     | current memory leak: -1.53 B/s (using 170 data points, chi2=0.15)
[2025-07-25 14:58:59] 2025-07-25 18:58:25,801 | INFO     | could have reported an average CPU frequency of 3035 MHz (10 samples)
[2025-07-25 14:58:59] 2025-07-25 18:58:25,801 | INFO     | ..............................
[2025-07-25 14:58:59] 2025-07-25 18:58:25,803 | INFO     | . Timing measurements:
[2025-07-25 14:58:59] 2025-07-25 18:58:25,803 | INFO     | . get job = 0 s
[2025-07-25 14:58:59] 2025-07-25 18:58:25,803 | INFO     | . initial setup = 3 s
[2025-07-25 14:58:59] 2025-07-25 18:58:25,804 | INFO     | . payload setup = 13 s
[2025-07-25 14:58:59] 2025-07-25 18:58:25,804 | INFO     | . stage-in = 0 s
[2025-07-25 14:58:59] 2025-07-25 18:58:25,804 | INFO     | . payload execution = 11938 s
[2025-07-25 14:58:59] 2025-07-25 18:58:25,804 | INFO     | . stage-out = 2 s
[2025-07-25 14:58:59] 2025-07-25 18:58:25,804 | INFO     | . log creation = 0 s
[2025-07-25 14:58:59] 2025-07-25 18:58:25,804 | INFO     | ..............................
[2025-07-25 14:58:59] 2025-07-25 18:58:26,037 | INFO     | 
[2025-07-25 14:58:59] 2025-07-25 18:58:26,037 | INFO     | job summary report
[2025-07-25 14:58:59] 2025-07-25 18:58:26,038 | INFO     | --------------------------------------------------
[2025-07-25 14:58:59] 2025-07-25 18:58:26,038 | INFO     | PanDA job id: 6744979007
[2025-07-25 14:58:59] 2025-07-25 18:58:26,038 | INFO     | task id: 45743349
[2025-07-25 14:58:59] 2025-07-25 18:58:26,038 | INFO     | errors: (none)
[2025-07-25 14:58:59] 2025-07-25 18:58:26,038 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 14:58:59] 2025-07-25 18:58:26,038 | INFO     | pilot state: finished 
[2025-07-25 14:58:59] 2025-07-25 18:58:26,038 | INFO     | transexitcode: 0
[2025-07-25 14:58:59] 2025-07-25 18:58:26,038 | INFO     | exeerrorcode: 0
[2025-07-25 14:58:59] 2025-07-25 18:58:26,038 | INFO     | exeerrordiag: 
[2025-07-25 14:58:59] 2025-07-25 18:58:26,038 | INFO     | exitcode: 0
[2025-07-25 14:58:59] 2025-07-25 18:58:26,038 | INFO     | exitmsg: OK
[2025-07-25 14:58:59] 2025-07-25 18:58:26,038 | INFO     | cpuconsumptiontime: 40596 s
[2025-07-25 14:58:59] 2025-07-25 18:58:26,038 | INFO     | nevents: 400
[2025-07-25 14:58:59] 2025-07-25 18:58:26,039 | INFO     | neventsw: 0
[2025-07-25 14:58:59] 2025-07-25 18:58:26,039 | INFO     | pid: 721752
[2025-07-25 14:58:59] 2025-07-25 18:58:26,039 | INFO     | pgrp: 721752
[2025-07-25 14:58:59] 2025-07-25 18:58:26,039 | INFO     | corecount: 8
[2025-07-25 14:58:59] 2025-07-25 18:58:26,039 | INFO     | event service: False
[2025-07-25 14:58:59] 2025-07-25 18:58:26,039 | INFO     | sizes: {0: 2397302, 1: 2397501, 11: 2397791, 11955: 2427645, 11958: 2436699, 11966: 2436837}
[2025-07-25 14:58:59] 2025-07-25 18:58:26,039 | INFO     | --------------------------------------------------
[2025-07-25 14:58:59] 2025-07-25 18:58:26,039 | INFO     | 
[2025-07-25 14:58:59] 2025-07-25 18:58:26,039 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 14:58:59] 2025-07-25 18:58:26,065 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,066 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,066 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,066 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,066 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,066 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,066 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,066 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,066 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,066 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,067 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,067 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,067 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,067 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,067 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,067 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,067 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 14:58:59] 2025-07-25 18:58:26,067 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,067 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 14:58:59] 2025-07-25 18:58:26,067 | INFO     | job 6744979007 has completed (purged errors)
[2025-07-25 14:58:59] 2025-07-25 18:58:26,067 | INFO     | overall cleanup function is called
[2025-07-25 14:58:59] 2025-07-25 18:58:27,077 | INFO     | --- collectZombieJob: --- 10, [721752]
[2025-07-25 14:58:59] 2025-07-25 18:58:27,077 | INFO     | zombie collector waiting for pid 721752
[2025-07-25 14:58:59] 2025-07-25 18:58:27,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 14:58:59] 2025-07-25 18:58:27,077 | INFO     | collected zombie processes
[2025-07-25 14:58:59] 2025-07-25 18:58:27,077 | INFO     | will attempt to kill all subprocesses of pid=721752
[2025-07-25 14:58:59] 2025-07-25 18:58:27,586 | INFO     | process IDs to be killed: [721752] (in reverse order)
[2025-07-25 14:58:59] 2025-07-25 18:58:27,773 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 14:58:59] 2025-07-25 18:58:27,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 14:58:59] 2025-07-25 18:58:27,800 | INFO     | did not find any defunct processes belonging to 721752
[2025-07-25 14:58:59] 2025-07-25 18:58:27,822 | INFO     | did not find any defunct processes belonging to 721752
[2025-07-25 14:58:59] 2025-07-25 18:58:27,822 | INFO     | ready for new job
[2025-07-25 14:58:59] 2025-07-25 18:58:27,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 14:58:59] 2025-07-25 18:58:27,825 | INFO     | ***************************************
[2025-07-25 14:58:59] 2025-07-25 18:58:27,825 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 14:58:59] 2025-07-25 18:58:27,825 | INFO     | ***************************************
[2025-07-25 14:58:59] 2025-07-25 18:58:27,825 | INFO     | 
[2025-07-25 14:58:59] 2025-07-25 18:58:27,842 | INFO     | architecture information:
[2025-07-25 14:58:59] 2025-07-25 18:58:27,843 | INFO     | executing command: cat /etc/os-release
[2025-07-25 14:58:59] 2025-07-25 18:58:27,871 | INFO     | cat /etc/os-release:
[2025-07-25 14:58:59] NAME="CentOS Linux"
[2025-07-25 14:58:59] VERSION="7 (Core)"
[2025-07-25 14:58:59] ID="centos"
[2025-07-25 14:58:59] ID_LIKE="rhel fedora"
[2025-07-25 14:58:59] VERSION_ID="7"
[2025-07-25 14:58:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 14:58:59] ANSI_COLOR="0;31"
[2025-07-25 14:58:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 14:58:59] HOME_URL="https://www.centos.org/"
[2025-07-25 14:58:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 14:58:59] 
[2025-07-25 14:58:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 14:58:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 14:58:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 14:58:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 14:58:59] 
[2025-07-25 14:58:59] 2025-07-25 18:58:27,871 | INFO     | ***************************************
[2025-07-25 14:58:59] 2025-07-25 18:58:28,376 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 14:58:59] 2025-07-25 18:58:28,429 | INFO     | sufficient remaining disk space (75841404928 B)
[2025-07-25 14:58:59] 2025-07-25 18:58:28,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 14:58:59] 2025-07-25 18:58:28,429 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 14:58:59] 2025-07-25 18:58:28,429 | INFO     | update_server=False
[2025-07-25 14:58:59] 2025-07-25 18:58:28,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 14:58:59] 2025-07-25 18:58:28,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 14:58:59] 2025-07-25 18:58:28,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 14:58:59] 2025-07-25 18:58:28,578 | INFO     | all payload control threads have been joined
[2025-07-25 14:58:59] 2025-07-25 18:58:28,608 | INFO     | all job control threads have been joined
[2025-07-25 14:58:59] 2025-07-25 18:58:29,127 | INFO     | all data control threads have been joined
[2025-07-25 14:58:59] 2025-07-25 18:58:29,162 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 14:58:59] 2025-07-25 18:58:29,162 | INFO     | aborting loop
[2025-07-25 14:58:59] 2025-07-25 18:58:29,436 | INFO     | [job] retrieve thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:29,462 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:29,584 | INFO     | [payload] control thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:29,614 | INFO     | [job] control thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:29,696 | INFO     | [job] validate thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:29,842 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:30,133 | INFO     | [data] control thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:30,168 | INFO     | [job] job monitor thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:30,334 | INFO     | [data] copytool_in thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:30,437 | INFO     | [data] copytool_out thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:30,491 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:30,786 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:30,844 | INFO     | [payload] validate_post thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:30,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 14:58:59] 2025-07-25 18:58:30,979 | INFO     | [payload] failed_post thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:31,907 | INFO     | [job] queue monitor thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:32,478 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 14:58:59] 2025-07-25 18:58:33,879 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140153611302720)>', '<ExcThread(monitor, started 140152886253312)>']
[2025-07-25 14:58:59] 2025-07-25 18:58:38,904 | INFO     | all workflow threads have been joined
[2025-07-25 14:58:59] 2025-07-25 18:58:38,906 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 14:58:59] 2025-07-25 18:58:38,906 | INFO     | traces error code: 0
[2025-07-25 14:58:59] 2025-07-25 18:58:38,906 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 14:58:59] 2025-07-25 18:58:58,770 | INFO     | PID=707739 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-25 14:58:59] 2025-07-25 18:58:58,770 | INFO     | .. there are 29 such processes running
[2025-07-25 14:58:59] 2025-07-25 18:58:58,771 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 14:58:59] 2025-07-25 18:58:58,771 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 14:58:59] 2025-07-25 18:58:58,771 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 14:58:59] 2025-07-25 18:58:58,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 14:58:59] 2025-07-25 18:58:58,771 | INFO     | [monitor] control thread has ended
[2025-07-25 14:58:59] 2025-07-25 18:58:58,934 [wrapper] ==== pilot stdout END ====
[2025-07-25 14:58:59] 2025-07-25 18:58:58,958 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 14:58:59] 2025-07-25 18:58:58,969 [wrapper] pilotpid: 707739
[2025-07-25 14:58:59] 2025-07-25 18:58:58,988 [wrapper] Pilot exit status: 0
[2025-07-25 14:58:59] 2025-07-25 18:58:59,031 [wrapper] pandaids: 6744979007
[2025-07-25 14:58:59] 2025-07-25 18:58:59,166 [wrapper] cleanup supervisor_pilot 1993783 707740
[2025-07-25 14:58:59] 2025-07-25 18:58:59,181 [wrapper] Test setup, not cleaning
[2025-07-25 14:58:59] 2025-07-25 18:58:59,185 [wrapper] apfmon messages muted
[2025-07-25 14:58:59] 2025-07-25 18:58:59,188 [wrapper] ==== wrapper stdout END ====
[2025-07-25 14:58:59] 2025-07-25 18:58:59,199 [wrapper] ==== wrapper stderr END ====
[2025-07-25 14:58:59]  *** Error codes and diagnostics ***
[2025-07-25 14:58:59]     "exeErrorCode": 0,
[2025-07-25 14:58:59]     "exeErrorDiag": "",
[2025-07-25 14:58:59]     "pilotErrorCode": 0,
[2025-07-25 14:58:59]     "pilotErrorDiag": "",
[2025-07-25 14:58:59]  *** Listing of results directory ***
[2025-07-25 14:58:59] total 347584
[2025-07-25 14:58:59] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 05:16 pilot3.tar.gz
[2025-07-25 14:58:59] -rwx------. 1 boincer umatlas     36292 Jul 25 05:24 runpilot2-wrapper.sh
[2025-07-25 14:58:59] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 05:24 queuedata.json
[2025-07-25 14:58:59] -rw-r--r--. 1 boincer umatlas       100 Jul 25 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 14:58:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 11:38 run_atlas
[2025-07-25 14:58:59] -rw-r--r--. 1 boincer umatlas       105 Jul 25 11:38 job.xml
[2025-07-25 14:58:59] -rw-r--r--. 2 boincer umatlas 143696022 Jul 25 11:38 EVNT.45743347._000992.pool.root.1
[2025-07-25 14:58:59] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 11:38 start_atlas.sh
[2025-07-25 14:58:59] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 11:38 shared
[2025-07-25 14:58:59] -rw-r--r--. 2 boincer umatlas    542884 Jul 25 11:38 input.tar.gz
[2025-07-25 14:58:59] -rw-r--r--. 1 boincer umatlas         0 Jul 25 11:38 boinc_lockfile
[2025-07-25 14:58:59] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 11:38 pandaJob.out
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas    979317 Jul 25 11:38 agis_schedconf.cvmfs.json
[2025-07-25 14:58:59] drwx------. 4 boincer umatlas      4096 Jul 25 11:38 pilot3
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas 205492503 Jul 25 14:57 HITS.45743349._019114.pool.root.1
[2025-07-25 14:58:59] -rw-r--r--. 1 boincer umatlas       530 Jul 25 14:57 boinc_task_state.xml
[2025-07-25 14:58:59] -rw-r--r--. 1 boincer umatlas      6935 Jul 25 14:57 init_data.xml
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas        95 Jul 25 14:58 pilot_heartbeat.json
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas      1034 Jul 25 14:58 memory_monitor_summary.json
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas   1593052 Jul 25 14:58 agis_ddmendpoints.agis.ALL.json
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas    374675 Jul 25 14:58 log.45743349._019114.job.log.tgz.1
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas      7774 Jul 25 14:58 heartbeat.json
[2025-07-25 14:58:59] -rw-r--r--. 1 boincer umatlas        28 Jul 25 14:58 wrapper_checkpoint.txt
[2025-07-25 14:58:59] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 14:58 boinc_mmap_file
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas       822 Jul 25 14:58 pilotlog.txt
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas   1052733 Jul 25 14:58 log.45743349._019114.job.log.1
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas       357 Jul 25 14:58 output.list
[2025-07-25 14:58:59] -rw-r--r--. 1 boincer umatlas       620 Jul 25 14:58 runtime_log
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas   1443840 Jul 25 14:58 result.tar.gz
[2025-07-25 14:58:59] -rw-r--r--. 1 boincer umatlas      8656 Jul 25 14:58 runtime_log.err
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas       655 Jul 25 14:58 gukLDmYqTz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtkyKDmAStLim.diag
[2025-07-25 14:58:59] -rw-r--r--. 1 boincer umatlas     21223 Jul 25 14:58 stderr.txt
[2025-07-25 14:58:59] HITS file was successfully produced:
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas 205492503 Jul 25 14:57 shared/HITS.pool.root.1
[2025-07-25 14:58:59]  *** Contents of shared directory: ***
[2025-07-25 14:58:59] total 342980
[2025-07-25 14:58:59] -rw-r--r--. 2 boincer umatlas 143696022 Jul 25 11:38 ATLAS.root_0
[2025-07-25 14:58:59] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 11:38 start_atlas.sh
[2025-07-25 14:58:59] -rw-r--r--. 2 boincer umatlas    542884 Jul 25 11:38 input.tar.gz
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas 205492503 Jul 25 14:57 HITS.pool.root.1
[2025-07-25 14:58:59] -rw-------. 1 boincer umatlas   1443840 Jul 25 14:58 result.tar.gz
14:59:01 (703502): run_atlas exited; CPU time 41041.252650
14:59:01 (703502): called boinc_finish(0)

</stderr_txt>
]]>

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