Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:32:57 (29278): wrapper (7.7.26015): starting
11:32:57 (29278): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 11:32:57] Arguments: --nthreads 8
[2025-07-25 11:32:57] Threads: 8
[2025-07-25 11:32:57] Checking for CVMFS
[2025-07-25 11:32:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 11:32:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 11:32:58] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 11:32:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 11:32:58] 2.11.2.0 2854 102355 108372 148746 1 56 12289261 20275200 1 130560 0 26241865 99.949 9253191 9710 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 11:32:58] CVMFS is ok
[2025-07-25 11:32:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 11:32:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 11:32:58] Further information can be found at the LHC@home message board.
[2025-07-25 11:32:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 11:32:58] Checking for apptainer binary...
[2025-07-25 11:32:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 11:32:58] Running /usr/bin/apptainer --version
[2025-07-25 11:32:58] apptainer version 1.3.2-1.el7
[2025-07-25 11:32:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 11:33:00] c-204-32.aglt2.org
[2025-07-25 11:33:00] apptainer works
[2025-07-25 11:33:00] Set ATHENA_PROC_NUMBER=8
[2025-07-25 11:33:00] Set ATHENA_CORE_NUMBER=8
[2025-07-25 11:33:00] Starting ATLAS job with PandaID=6744952882
[2025-07-25 11:33:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 13:54:29]  *** The last 200 lines of the pilot log: ***
[2025-07-25 13:54:29] 2025-07-25 17:53:52,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 13:54:29] 2025-07-25 17:53:53,119 | INFO     | PID=468 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-07-25 13:54:29] 2025-07-25 17:53:54,746 | INFO     | monitor loop #621: job 0:6744952882 is in state 'finished'
[2025-07-25 13:54:29] 2025-07-25 17:53:54,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 13:54:29] 2025-07-25 17:53:56,903 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-25 13:54:29] 2025-07-25 17:53:56,906 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-07-25 13:54:29] 2025-07-25 17:53:56,908 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744952882/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 13:54:29] 2025-07-25 17:53:56,909 | INFO     | extracted standard info from prmon json
[2025-07-25 13:54:29] 2025-07-25 17:53:56,909 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 13:54:29] 2025-07-25 17:53:56,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 13:54:29] 2025-07-25 17:53:56,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 13:54:29] 2025-07-25 17:53:56,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 13:54:29] 2025-07-25 17:53:56,914 | INFO     | fitting pss+swap vs Time
[2025-07-25 13:54:29] 2025-07-25 17:53:56,914 | INFO     | sum of square deviations: 814878534.5
[2025-07-25 13:54:29] 2025-07-25 17:53:56,915 | INFO     | sum of deviations: -5120934322.999998
[2025-07-25 13:54:29] 2025-07-25 17:53:56,915 | INFO     | mean x: 1753461809.5
[2025-07-25 13:54:29] 2025-07-25 17:53:56,915 | INFO     | mean y: 2530156.086956522
[2025-07-25 13:54:29] 2025-07-25 17:53:56,915 | INFO     | -- intersect: 11021795462.722952
[2025-07-25 13:54:29] 2025-07-25 17:53:56,916 | INFO     | intersect: 11021795462.722952
[2025-07-25 13:54:29] 2025-07-25 17:53:56,916 | INFO     | chi2: 1.601976370264518
[2025-07-25 13:54:29] 2025-07-25 17:53:56,916 | INFO     | sum of square deviations: 729472282.0
[2025-07-25 13:54:29] 2025-07-25 17:53:56,917 | INFO     | sum of deviations: -4584775738.0
[2025-07-25 13:54:29] 2025-07-25 17:53:56,917 | INFO     | mean x: 1753461657.0
[2025-07-25 13:54:29] 2025-07-25 17:53:56,917 | INFO     | mean y: 2531115.5864661653
[2025-07-25 13:54:29] 2025-07-25 17:53:56,917 | INFO     | -- intersect: 11023139658.087437
[2025-07-25 13:54:29] 2025-07-25 17:53:56,917 | INFO     | intersect: 11023139658.087437
[2025-07-25 13:54:29] 2025-07-25 17:53:56,918 | INFO     | chi2: 1.6019632777395527
[2025-07-25 13:54:29] 2025-07-25 17:53:56,918 | INFO     | current chi2=1.6019632777395527 (change=0.0008172732886892679 %)
[2025-07-25 13:54:29] 2025-07-25 17:53:56,918 | INFO     | right removable region: 132
[2025-07-25 13:54:29] 2025-07-25 17:53:56,918 | INFO     | sum of square deviations: 729472282.0
[2025-07-25 13:54:29] 2025-07-25 17:53:56,919 | INFO     | sum of deviations: -25657822744.999996
[2025-07-25 13:54:29] 2025-07-25 17:53:56,919 | INFO     | mean x: 1753461962.0
[2025-07-25 13:54:29] 2025-07-25 17:53:56,919 | INFO     | mean y: 2566212.135338346
[2025-07-25 13:54:29] 2025-07-25 17:53:56,919 | INFO     | -- intersect: 61677310162.30495
[2025-07-25 13:54:29] 2025-07-25 17:53:56,919 | INFO     | intersect: 61677310162.30495
[2025-07-25 13:54:29] 2025-07-25 17:53:56,919 | INFO     | chi2: 0.142716705341221
[2025-07-25 13:54:29] 2025-07-25 17:53:56,920 | INFO     | current chi2=0.142716705341221 (change=91.09121033304282 %)
[2025-07-25 13:54:29] 2025-07-25 17:53:56,920 | INFO     | sum of square deviations: 650252192.0
[2025-07-25 13:54:29] 2025-07-25 17:53:56,920 | INFO     | sum of deviations: -23964559613.0
[2025-07-25 13:54:29] 2025-07-25 17:53:56,921 | INFO     | mean x: 1753462114.5
[2025-07-25 13:54:29] 2025-07-25 17:53:56,921 | INFO     | mean y: 2562871.875
[2025-07-25 13:54:29] 2025-07-25 17:53:56,921 | INFO     | -- intersect: 64625101463.90527
[2025-07-25 13:54:29] 2025-07-25 17:53:56,921 | INFO     | intersect: 64625101463.90527
[2025-07-25 13:54:29] 2025-07-25 17:53:56,921 | INFO     | chi2: 0.13055938145668972
[2025-07-25 13:54:29] 2025-07-25 17:53:56,921 | INFO     | current chi2=0.13055938145668972 (change=8.518500938950606 %)
[2025-07-25 13:54:29] 2025-07-25 17:53:56,921 | INFO     | left removable region: 20
[2025-07-25 13:54:29] 2025-07-25 17:53:56,922 | INFO     | sum of square deviations: 435610028.0
[2025-07-25 13:54:29] 2025-07-25 17:53:56,922 | INFO     | sum of deviations: -15358418746.500002
[2025-07-25 13:54:29] 2025-07-25 17:53:56,922 | INFO     | mean x: 1753462236.5
[2025-07-25 13:54:29] 2025-07-25 17:53:56,923 | INFO     | mean y: 2548350.9553571427
[2025-07-25 13:54:29] 2025-07-25 17:53:56,923 | INFO     | -- intersect: 61824833315.29833
[2025-07-25 13:54:29] 2025-07-25 17:53:56,923 | INFO     | intersect: 61824833315.29833
[2025-07-25 13:54:29] 2025-07-25 17:53:56,923 | INFO     | chi2: 0.1169724051652672
[2025-07-25 13:54:29] 2025-07-25 17:53:56,923 | INFO     | -- intersect: 61824833315.29833
[2025-07-25 13:54:29] 2025-07-25 17:53:56,923 | INFO     | current memory leak: -35.26 B/s (using 112 data points, chi2=0.12)
[2025-07-25 13:54:29] 2025-07-25 17:53:56,924 | INFO     | could have reported an average CPU frequency of 1985 MHz (8 samples)
[2025-07-25 13:54:29] 2025-07-25 17:53:56,924 | INFO     | ..............................
[2025-07-25 13:54:29] 2025-07-25 17:53:56,924 | INFO     | . Timing measurements:
[2025-07-25 13:54:29] 2025-07-25 17:53:56,924 | INFO     | . get job = 0 s
[2025-07-25 13:54:29] 2025-07-25 17:53:56,924 | INFO     | . initial setup = 2 s
[2025-07-25 13:54:29] 2025-07-25 17:53:56,924 | INFO     | . payload setup = 11 s
[2025-07-25 13:54:29] 2025-07-25 17:53:56,924 | INFO     | . stage-in = 0 s
[2025-07-25 13:54:29] 2025-07-25 17:53:56,925 | INFO     | . payload execution = 8397 s
[2025-07-25 13:54:29] 2025-07-25 17:53:56,925 | INFO     | . stage-out = 0 s
[2025-07-25 13:54:29] 2025-07-25 17:53:56,925 | INFO     | . log creation = 0 s
[2025-07-25 13:54:29] 2025-07-25 17:53:56,925 | INFO     | ..............................
[2025-07-25 13:54:29] 2025-07-25 17:53:57,017 | INFO     | 
[2025-07-25 13:54:29] 2025-07-25 17:53:57,017 | INFO     | job summary report
[2025-07-25 13:54:29] 2025-07-25 17:53:57,017 | INFO     | --------------------------------------------------
[2025-07-25 13:54:29] 2025-07-25 17:53:57,018 | INFO     | PanDA job id: 6744952882
[2025-07-25 13:54:29] 2025-07-25 17:53:57,018 | INFO     | task id: 45743349
[2025-07-25 13:54:29] 2025-07-25 17:53:57,018 | INFO     | errors: (none)
[2025-07-25 13:54:29] 2025-07-25 17:53:57,018 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 13:54:29] 2025-07-25 17:53:57,018 | INFO     | pilot state: finished 
[2025-07-25 13:54:29] 2025-07-25 17:53:57,018 | INFO     | transexitcode: 0
[2025-07-25 13:54:29] 2025-07-25 17:53:57,019 | INFO     | exeerrorcode: 0
[2025-07-25 13:54:29] 2025-07-25 17:53:57,019 | INFO     | exeerrordiag: 
[2025-07-25 13:54:29] 2025-07-25 17:53:57,019 | INFO     | exitcode: 0
[2025-07-25 13:54:29] 2025-07-25 17:53:57,019 | INFO     | exitmsg: OK
[2025-07-25 13:54:29] 2025-07-25 17:53:57,019 | INFO     | cpuconsumptiontime: 62848 s
[2025-07-25 13:54:29] 2025-07-25 17:53:57,019 | INFO     | nevents: 400
[2025-07-25 13:54:29] 2025-07-25 17:53:57,020 | INFO     | neventsw: 0
[2025-07-25 13:54:29] 2025-07-25 17:53:57,020 | INFO     | pid: 7134
[2025-07-25 13:54:29] 2025-07-25 17:53:57,020 | INFO     | pgrp: 7134
[2025-07-25 13:54:29] 2025-07-25 17:53:57,020 | INFO     | corecount: 8
[2025-07-25 13:54:29] 2025-07-25 17:53:57,020 | INFO     | event service: False
[2025-07-25 13:54:29] 2025-07-25 17:53:57,020 | INFO     | sizes: {0: 2397302, 1: 2397501, 7: 2397763, 12: 2397791, 8413: 2425644, 8414: 2434642, 8416: 2434826, 8424: 2435020}
[2025-07-25 13:54:29] 2025-07-25 17:53:57,021 | INFO     | --------------------------------------------------
[2025-07-25 13:54:29] 2025-07-25 17:53:57,021 | INFO     | 
[2025-07-25 13:54:29] 2025-07-25 17:53:57,021 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 13:54:29] 2025-07-25 17:53:57,050 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,050 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,051 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,051 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,051 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,051 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,051 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,052 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,052 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,052 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,052 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,053 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 13:54:29] 2025-07-25 17:53:57,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,054 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 13:54:29] 2025-07-25 17:53:57,054 | INFO     | job 6744952882 has completed (purged errors)
[2025-07-25 13:54:29] 2025-07-25 17:53:57,054 | INFO     | overall cleanup function is called
[2025-07-25 13:54:29] 2025-07-25 17:53:58,058 | INFO     | --- collectZombieJob: --- 10, [7134]
[2025-07-25 13:54:29] 2025-07-25 17:53:58,059 | INFO     | zombie collector waiting for pid 7134
[2025-07-25 13:54:29] 2025-07-25 17:53:58,059 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 13:54:29] 2025-07-25 17:53:58,059 | INFO     | collected zombie processes
[2025-07-25 13:54:29] 2025-07-25 17:53:58,059 | INFO     | will attempt to kill all subprocesses of pid=7134
[2025-07-25 13:54:29] 2025-07-25 17:53:58,149 | INFO     | process IDs to be killed: [7134] (in reverse order)
[2025-07-25 13:54:29] 2025-07-25 17:53:58,210 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 13:54:29] 2025-07-25 17:53:58,211 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 13:54:29] 2025-07-25 17:53:58,216 | INFO     | did not find any defunct processes belonging to 7134
[2025-07-25 13:54:29] 2025-07-25 17:53:58,220 | INFO     | did not find any defunct processes belonging to 7134
[2025-07-25 13:54:29] 2025-07-25 17:53:58,220 | INFO     | ready for new job
[2025-07-25 13:54:29] 2025-07-25 17:53:58,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 13:54:29] 2025-07-25 17:53:58,222 | INFO     | ***************************************
[2025-07-25 13:54:29] 2025-07-25 17:53:58,223 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 13:54:29] 2025-07-25 17:53:58,223 | INFO     | ***************************************
[2025-07-25 13:54:29] 2025-07-25 17:53:58,223 | INFO     | 
[2025-07-25 13:54:29] 2025-07-25 17:53:58,224 | INFO     | architecture information:
[2025-07-25 13:54:29] 2025-07-25 17:53:58,224 | INFO     | executing command: cat /etc/os-release
[2025-07-25 13:54:29] 2025-07-25 17:53:58,243 | INFO     | cat /etc/os-release:
[2025-07-25 13:54:29] NAME="CentOS Linux"
[2025-07-25 13:54:29] VERSION="7 (Core)"
[2025-07-25 13:54:29] ID="centos"
[2025-07-25 13:54:29] ID_LIKE="rhel fedora"
[2025-07-25 13:54:29] VERSION_ID="7"
[2025-07-25 13:54:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 13:54:29] ANSI_COLOR="0;31"
[2025-07-25 13:54:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 13:54:29] HOME_URL="https://www.centos.org/"
[2025-07-25 13:54:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 13:54:29] 
[2025-07-25 13:54:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 13:54:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 13:54:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 13:54:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 13:54:29] 
[2025-07-25 13:54:29] 2025-07-25 17:53:58,243 | INFO     | ***************************************
[2025-07-25 13:54:29] 2025-07-25 17:53:58,747 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 13:54:29] 2025-07-25 17:53:58,767 | INFO     | sufficient remaining disk space (18705547264 B)
[2025-07-25 13:54:29] 2025-07-25 17:53:58,768 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 13:54:29] 2025-07-25 17:53:58,768 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 13:54:29] 2025-07-25 17:53:58,768 | INFO     | update_server=False
[2025-07-25 13:54:29] 2025-07-25 17:53:58,768 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 13:54:29] 2025-07-25 17:53:58,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 13:54:29] 2025-07-25 17:53:58,769 | INFO     | aborting loop
[2025-07-25 13:54:29] 2025-07-25 17:53:58,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 13:54:29] 2025-07-25 17:53:59,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 13:54:29] 2025-07-25 17:53:59,661 | INFO     | all data control threads have been joined
[2025-07-25 13:54:29] 2025-07-25 17:53:59,685 | INFO     | all job control threads have been joined
[2025-07-25 13:54:29] 2025-07-25 17:53:59,771 | INFO     | [job] job monitor thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:53:59,773 | INFO     | [job] queue monitor thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:53:59,774 | INFO     | [job] retrieve thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:53:59,802 | INFO     | [payload] validate_post thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:54:00,019 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 13:54:29] 2025-07-25 17:54:00,227 | INFO     | [payload] failed_post thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:54:00,266 | INFO     | all payload control threads have been joined
[2025-07-25 13:54:29] 2025-07-25 17:54:00,414 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:54:00,642 | INFO     | [data] copytool_in thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:54:00,667 | INFO     | [data] control thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:54:00,690 | INFO     | [job] control thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:54:00,727 | INFO     | [job] validate thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:54:00,779 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:54:00,780 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:54:01,272 | INFO     | [payload] control thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:54:02,025 | INFO     | [data] copytool_out thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:54:03,596 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:54:09,114 | INFO     | job.realtimelogging is not enabled
[2025-07-25 13:54:29] 2025-07-25 17:54:10,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 13:54:29] 2025-07-25 17:54:11,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748114138944)>', '<ExcThread(monitor, started 139747523536640)>']
[2025-07-25 13:54:29] 2025-07-25 17:54:16,261 | INFO     | all workflow threads have been joined
[2025-07-25 13:54:29] 2025-07-25 17:54:16,261 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 13:54:29] 2025-07-25 17:54:16,262 | INFO     | traces error code: 0
[2025-07-25 13:54:29] 2025-07-25 17:54:16,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 13:54:29] 2025-07-25 17:54:29,328 | INFO     | PID=468 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-07-25 13:54:29] 2025-07-25 17:54:29,333 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 13:54:29] 2025-07-25 17:54:29,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 13:54:29] 2025-07-25 17:54:29,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 13:54:29] 2025-07-25 17:54:29,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 13:54:29] 2025-07-25 17:54:29,334 | INFO     | [monitor] control thread has ended
[2025-07-25 13:54:29] 2025-07-25 17:54:29,445 [wrapper] ==== pilot stdout END ====
[2025-07-25 13:54:29] 2025-07-25 17:54:29,450 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 13:54:29] 2025-07-25 17:54:29,455 [wrapper] pilotpid: 468
[2025-07-25 13:54:29] 2025-07-25 17:54:29,459 [wrapper] Pilot exit status: 0
[2025-07-25 13:54:29] 2025-07-25 17:54:29,478 [wrapper] pandaids: 6744952882
[2025-07-25 13:54:29] 2025-07-25 17:54:29,523 [wrapper] cleanup supervisor_pilot 12196 469
[2025-07-25 13:54:29] 2025-07-25 17:54:29,528 [wrapper] Test setup, not cleaning
[2025-07-25 13:54:29] 2025-07-25 17:54:29,532 [wrapper] apfmon messages muted
[2025-07-25 13:54:29] 2025-07-25 17:54:29,537 [wrapper] ==== wrapper stdout END ====
[2025-07-25 13:54:29] 2025-07-25 17:54:29,542 [wrapper] ==== wrapper stderr END ====
[2025-07-25 13:54:29]  *** Error codes and diagnostics ***
[2025-07-25 13:54:29]     "exeErrorCode": 0,
[2025-07-25 13:54:29]     "exeErrorDiag": "",
[2025-07-25 13:54:29]     "pilotErrorCode": 0,
[2025-07-25 13:54:29]     "pilotErrorDiag": "",
[2025-07-25 13:54:29]  *** Listing of results directory ***
[2025-07-25 13:54:29] total 350976
[2025-07-25 13:54:29] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 01:31 pilot3.tar.gz
[2025-07-25 13:54:29] -rwx------ 1 boincer umatlas     36292 Jul 25 01:34 runpilot2-wrapper.sh
[2025-07-25 13:54:29] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 01:34 queuedata.json
[2025-07-25 13:54:29] -rw-r--r-- 1 boincer umatlas       100 Jul 25 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 13:54:29] -rwxr-xr-x 1 boincer umatlas      7986 Jul 25 11:32 run_atlas
[2025-07-25 13:54:29] -rw-r--r-- 1 boincer umatlas       105 Jul 25 11:32 job.xml
[2025-07-25 13:54:29] -rw-r--r-- 2 boincer umatlas 146332743 Jul 25 11:32 EVNT.45743347._000937.pool.root.1
[2025-07-25 13:54:29] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 11:32 start_atlas.sh
[2025-07-25 13:54:29] drwxrwx--x 2 boincer umatlas      4096 Jul 25 11:32 shared
[2025-07-25 13:54:29] -rw-r--r-- 2 boincer umatlas    542883 Jul 25 11:32 input.tar.gz
[2025-07-25 13:54:29] -rw-r--r-- 1 boincer umatlas         0 Jul 25 11:32 boinc_lockfile
[2025-07-25 13:54:29] -rw-r--r-- 1 boincer umatlas      2562 Jul 25 11:33 pandaJob.out
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas    979317 Jul 25 11:33 agis_schedconf.cvmfs.json
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas   1593052 Jul 25 11:33 agis_ddmendpoints.agis.ALL.json
[2025-07-25 13:54:29] drwx------ 4 boincer umatlas      4096 Jul 25 11:33 pilot3
[2025-07-25 13:54:29] -rw-r--r-- 1 boincer umatlas      5905 Jul 25 13:46 init_data.xml
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas 206979513 Jul 25 13:53 HITS.45743349._016657.pool.root.1
[2025-07-25 13:54:29] -rw-r--r-- 1 boincer umatlas       529 Jul 25 13:53 boinc_task_state.xml
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas      1048 Jul 25 13:53 memory_monitor_summary.json
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas    342126 Jul 25 13:53 log.45743349._016657.job.log.tgz.1
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas      7847 Jul 25 13:53 heartbeat.json
[2025-07-25 13:54:29] -rw-r--r-- 1 boincer umatlas      8192 Jul 25 13:54 boinc_mmap_file
[2025-07-25 13:54:29] -rw-r--r-- 1 boincer umatlas        27 Jul 25 13:54 wrapper_checkpoint.txt
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas       743 Jul 25 13:54 pilotlog.txt
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas        95 Jul 25 13:54 pilot_heartbeat.json
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas    764403 Jul 25 13:54 log.45743349._016657.job.log.1
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas       357 Jul 25 13:54 output.list
[2025-07-25 13:54:29] -rw-r--r-- 1 boincer umatlas       620 Jul 25 13:54 runtime_log
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas   1126400 Jul 25 13:54 result.tar.gz
[2025-07-25 13:54:29] -rw-r--r-- 1 boincer umatlas      8660 Jul 25 13:54 runtime_log.err
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas       660 Jul 25 13:54 pkeNDmaFQz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvnOLDmJ5I4Dn.diag
[2025-07-25 13:54:29] -rw-r--r-- 1 boincer umatlas     21208 Jul 25 13:54 stderr.txt
[2025-07-25 13:54:29] HITS file was successfully produced:
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas 206979513 Jul 25 13:53 shared/HITS.pool.root.1
[2025-07-25 13:54:29]  *** Contents of shared directory: ***
[2025-07-25 13:54:29] total 346688
[2025-07-25 13:54:29] -rw-r--r-- 2 boincer umatlas 146332743 Jul 25 11:32 ATLAS.root_0
[2025-07-25 13:54:29] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 11:32 start_atlas.sh
[2025-07-25 13:54:29] -rw-r--r-- 2 boincer umatlas    542883 Jul 25 11:32 input.tar.gz
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas 206979513 Jul 25 13:53 HITS.pool.root.1
[2025-07-25 13:54:29] -rw------- 1 boincer umatlas   1126400 Jul 25 13:54 result.tar.gz
13:54:30 (29278): run_atlas exited; CPU time 62800.797514
13:54:30 (29278): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN