Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:40:18 (25159): wrapper (7.7.26015): starting
11:40:18 (25159): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 11:40:18] Arguments: --nthreads 8
[2025-07-25 11:40:18] Threads: 8
[2025-07-25 11:40:18] Checking for CVMFS
[2025-07-25 11:40:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 11:40:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 11:40:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 11:40:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 11:40:19] 2.11.2.0 2886 109328 108744 148746 1 56 12985317 20275200 1 130560 0 28390136 99.953 10262713 10778 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 11:40:19] CVMFS is ok
[2025-07-25 11:40:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 11:40:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 11:40:19] Further information can be found at the LHC@home message board.
[2025-07-25 11:40:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 11:40:19] Checking for apptainer binary...
[2025-07-25 11:40:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 11:40:19] Running /usr/bin/apptainer --version
[2025-07-25 11:40:19] apptainer version 1.3.2-1.el7
[2025-07-25 11:40:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 11:40:21] c-204-33.aglt2.org
[2025-07-25 11:40:21] apptainer works
[2025-07-25 11:40:21] Set ATHENA_PROC_NUMBER=8
[2025-07-25 11:40:21] Set ATHENA_CORE_NUMBER=8
[2025-07-25 11:40:21] Starting ATLAS job with PandaID=6744978358
[2025-07-25 11:40:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 14:11:55]  *** The last 200 lines of the pilot log: ***
[2025-07-25 14:11:55] 2025-07-25 18:11:16,497 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 14:11:55] 2025-07-25 18:11:18,281 | INFO     | monitor loop #672: job 0:6744978358 is in state 'finished'
[2025-07-25 14:11:55] 2025-07-25 18:11:18,282 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 14:11:55] 2025-07-25 18:11:20,787 | INFO     | monitor loop #673: job 0:6744978358 is in state 'finished'
[2025-07-25 14:11:55] 2025-07-25 18:11:20,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 14:11:55] 2025-07-25 18:11:22,435 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-25 14:11:55] 2025-07-25 18:11:22,439 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-07-25 14:11:55] 2025-07-25 18:11:22,441 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744978358/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 14:11:55] 2025-07-25 18:11:22,442 | INFO     | extracted standard info from prmon json
[2025-07-25 14:11:55] 2025-07-25 18:11:22,442 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 14:11:55] 2025-07-25 18:11:22,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 14:11:55] 2025-07-25 18:11:22,443 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 14:11:55] 2025-07-25 18:11:22,443 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 14:11:55] 2025-07-25 18:11:22,446 | INFO     | fitting pss+swap vs Time
[2025-07-25 14:11:55] 2025-07-25 18:11:22,447 | INFO     | sum of square deviations: 1005179777.0
[2025-07-25 14:11:55] 2025-07-25 18:11:22,447 | INFO     | sum of deviations: 248271158.99999544
[2025-07-25 14:11:55] 2025-07-25 18:11:22,448 | INFO     | mean x: 1753462552.5
[2025-07-25 14:11:55] 2025-07-25 18:11:22,448 | INFO     | mean y: 2522070.864864865
[2025-07-25 14:11:55] 2025-07-25 18:11:22,448 | INFO     | -- intersect: -430568795.2004453
[2025-07-25 14:11:55] 2025-07-25 18:11:22,448 | INFO     | intersect: -430568795.2004453
[2025-07-25 14:11:55] 2025-07-25 18:11:22,448 | INFO     | chi2: 1.5818358028557131
[2025-07-25 14:11:55] 2025-07-25 18:11:22,449 | INFO     | sum of square deviations: 906703512.0
[2025-07-25 14:11:55] 2025-07-25 18:11:22,449 | INFO     | sum of deviations: 281828113.0000008
[2025-07-25 14:11:55] 2025-07-25 18:11:22,449 | INFO     | mean x: 1753462400.0
[2025-07-25 14:11:55] 2025-07-25 18:11:22,450 | INFO     | mean y: 2522129.6713286713
[2025-07-25 14:11:55] 2025-07-25 18:11:22,450 | INFO     | -- intersect: -542501676.7528958
[2025-07-25 14:11:55] 2025-07-25 18:11:22,450 | INFO     | intersect: -542501676.7528958
[2025-07-25 14:11:55] 2025-07-25 18:11:22,450 | INFO     | chi2: 1.5818758563662632
[2025-07-25 14:11:55] 2025-07-25 18:11:22,450 | INFO     | current chi2=1.5818758563662632 (change=-0.002532090276229796 %)
[2025-07-25 14:11:55] 2025-07-25 18:11:22,450 | INFO     | right removable region: 142
[2025-07-25 14:11:55] 2025-07-25 18:11:22,451 | INFO     | sum of square deviations: 906703512.0
[2025-07-25 14:11:55] 2025-07-25 18:11:22,451 | INFO     | sum of deviations: -21547544047.000004
[2025-07-25 14:11:55] 2025-07-25 18:11:22,452 | INFO     | mean x: 1753462705.0
[2025-07-25 14:11:55] 2025-07-25 18:11:22,452 | INFO     | mean y: 2555290.118881119
[2025-07-25 14:11:55] 2025-07-25 18:11:22,452 | INFO     | -- intersect: 41673084157.28762
[2025-07-25 14:11:55] 2025-07-25 18:11:22,452 | INFO     | intersect: 41673084157.28762
[2025-07-25 14:11:55] 2025-07-25 18:11:22,452 | INFO     | chi2: 0.15124138654674332
[2025-07-25 14:11:55] 2025-07-25 18:11:22,452 | INFO     | current chi2=0.15124138654674332 (change=90.43886942793273 %)
[2025-07-25 14:11:55] 2025-07-25 18:11:22,453 | INFO     | sum of square deviations: 814878534.5
[2025-07-25 14:11:55] 2025-07-25 18:11:22,453 | INFO     | sum of deviations: -20649372635.499996
[2025-07-25 14:11:55] 2025-07-25 18:11:22,453 | INFO     | mean x: 1753462857.5
[2025-07-25 14:11:55] 2025-07-25 18:11:22,453 | INFO     | mean y: 2553702.355072464
[2025-07-25 14:11:55] 2025-07-25 18:11:22,454 | INFO     | -- intersect: 44436056873.77298
[2025-07-25 14:11:55] 2025-07-25 18:11:22,454 | INFO     | intersect: 44436056873.77298
[2025-07-25 14:11:55] 2025-07-25 18:11:22,454 | INFO     | chi2: 0.13246437461824181
[2025-07-25 14:11:55] 2025-07-25 18:11:22,454 | INFO     | current chi2=0.13246437461824181 (change=12.415260371008436 %)
[2025-07-25 14:11:55] 2025-07-25 18:11:22,454 | INFO     | left removable region: 20
[2025-07-25 14:11:55] 2025-07-25 18:11:22,455 | INFO     | sum of square deviations: 563026370.5
[2025-07-25 14:11:55] 2025-07-25 18:11:22,455 | INFO     | sum of deviations: -11305008640.499992
[2025-07-25 14:11:55] 2025-07-25 18:11:22,455 | INFO     | mean x: 1753462979.5
[2025-07-25 14:11:55] 2025-07-25 18:11:22,455 | INFO     | mean y: 2537946.6967213117
[2025-07-25 14:11:55] 2025-07-25 18:11:22,455 | INFO     | -- intersect: 35210327799.311386
[2025-07-25 14:11:55] 2025-07-25 18:11:22,456 | INFO     | intersect: 35210327799.311386
[2025-07-25 14:11:55] 2025-07-25 18:11:22,456 | INFO     | chi2: 0.104902939298694
[2025-07-25 14:11:55] 2025-07-25 18:11:22,456 | INFO     | -- intersect: 35210327799.311386
[2025-07-25 14:11:55] 2025-07-25 18:11:22,456 | INFO     | current memory leak: -20.08 B/s (using 122 data points, chi2=0.10)
[2025-07-25 14:11:55] 2025-07-25 18:11:22,456 | INFO     | could have reported an average CPU frequency of 1991 MHz (8 samples)
[2025-07-25 14:11:55] 2025-07-25 18:11:22,457 | INFO     | ..............................
[2025-07-25 14:11:55] 2025-07-25 18:11:22,457 | INFO     | . Timing measurements:
[2025-07-25 14:11:55] 2025-07-25 18:11:22,457 | INFO     | . get job = 0 s
[2025-07-25 14:11:55] 2025-07-25 18:11:22,457 | INFO     | . initial setup = 2 s
[2025-07-25 14:11:55] 2025-07-25 18:11:22,457 | INFO     | . payload setup = 11 s
[2025-07-25 14:11:55] 2025-07-25 18:11:22,457 | INFO     | . stage-in = 0 s
[2025-07-25 14:11:55] 2025-07-25 18:11:22,458 | INFO     | . payload execution = 9002 s
[2025-07-25 14:11:55] 2025-07-25 18:11:22,458 | INFO     | . stage-out = 0 s
[2025-07-25 14:11:55] 2025-07-25 18:11:22,458 | INFO     | . log creation = 0 s
[2025-07-25 14:11:55] 2025-07-25 18:11:22,458 | INFO     | ..............................
[2025-07-25 14:11:55] 2025-07-25 18:11:22,563 | INFO     | 
[2025-07-25 14:11:55] 2025-07-25 18:11:22,563 | INFO     | job summary report
[2025-07-25 14:11:55] 2025-07-25 18:11:22,563 | INFO     | --------------------------------------------------
[2025-07-25 14:11:55] 2025-07-25 18:11:22,563 | INFO     | PanDA job id: 6744978358
[2025-07-25 14:11:55] 2025-07-25 18:11:22,563 | INFO     | task id: 45743349
[2025-07-25 14:11:55] 2025-07-25 18:11:22,564 | INFO     | errors: (none)
[2025-07-25 14:11:55] 2025-07-25 18:11:22,564 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 14:11:55] 2025-07-25 18:11:22,564 | INFO     | pilot state: finished 
[2025-07-25 14:11:55] 2025-07-25 18:11:22,564 | INFO     | transexitcode: 0
[2025-07-25 14:11:55] 2025-07-25 18:11:22,564 | INFO     | exeerrorcode: 0
[2025-07-25 14:11:55] 2025-07-25 18:11:22,565 | INFO     | exeerrordiag: 
[2025-07-25 14:11:55] 2025-07-25 18:11:22,565 | INFO     | exitcode: 0
[2025-07-25 14:11:55] 2025-07-25 18:11:22,565 | INFO     | exitmsg: OK
[2025-07-25 14:11:55] 2025-07-25 18:11:22,565 | INFO     | cpuconsumptiontime: 64152 s
[2025-07-25 14:11:55] 2025-07-25 18:11:22,565 | INFO     | nevents: 400
[2025-07-25 14:11:55] 2025-07-25 18:11:22,565 | INFO     | neventsw: 0
[2025-07-25 14:11:55] 2025-07-25 18:11:22,566 | INFO     | pid: 3018
[2025-07-25 14:11:55] 2025-07-25 18:11:22,566 | INFO     | pgrp: 3018
[2025-07-25 14:11:55] 2025-07-25 18:11:22,566 | INFO     | corecount: 8
[2025-07-25 14:11:55] 2025-07-25 18:11:22,566 | INFO     | event service: False
[2025-07-25 14:11:55] 2025-07-25 18:11:22,566 | INFO     | sizes: {0: 2397245, 1: 2397500, 6: 2397762, 12: 2397790, 9017: 2426091, 9019: 2435089, 9021: 2435273, 9030: 2435467}
[2025-07-25 14:11:55] 2025-07-25 18:11:22,566 | INFO     | --------------------------------------------------
[2025-07-25 14:11:55] 2025-07-25 18:11:22,567 | INFO     | 
[2025-07-25 14:11:55] 2025-07-25 18:11:22,567 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 14:11:55] 2025-07-25 18:11:22,595 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,595 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,595 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,596 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,596 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,596 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,596 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,596 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,598 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 14:11:55] 2025-07-25 18:11:22,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,598 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 14:11:55] 2025-07-25 18:11:22,599 | INFO     | job 6744978358 has completed (purged errors)
[2025-07-25 14:11:55] 2025-07-25 18:11:22,599 | INFO     | overall cleanup function is called
[2025-07-25 14:11:55] 2025-07-25 18:11:23,604 | INFO     | --- collectZombieJob: --- 10, [3018]
[2025-07-25 14:11:55] 2025-07-25 18:11:23,604 | INFO     | zombie collector waiting for pid 3018
[2025-07-25 14:11:55] 2025-07-25 18:11:23,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 14:11:55] 2025-07-25 18:11:23,604 | INFO     | collected zombie processes
[2025-07-25 14:11:55] 2025-07-25 18:11:23,604 | INFO     | will attempt to kill all subprocesses of pid=3018
[2025-07-25 14:11:55] 2025-07-25 18:11:23,699 | INFO     | process IDs to be killed: [3018] (in reverse order)
[2025-07-25 14:11:55] 2025-07-25 18:11:23,756 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 14:11:55] 2025-07-25 18:11:23,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 14:11:55] 2025-07-25 18:11:23,760 | INFO     | did not find any defunct processes belonging to 3018
[2025-07-25 14:11:55] 2025-07-25 18:11:23,763 | INFO     | did not find any defunct processes belonging to 3018
[2025-07-25 14:11:55] 2025-07-25 18:11:23,763 | INFO     | ready for new job
[2025-07-25 14:11:55] 2025-07-25 18:11:23,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 14:11:55] 2025-07-25 18:11:23,765 | INFO     | ***************************************
[2025-07-25 14:11:55] 2025-07-25 18:11:23,765 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 14:11:55] 2025-07-25 18:11:23,765 | INFO     | ***************************************
[2025-07-25 14:11:55] 2025-07-25 18:11:23,766 | INFO     | 
[2025-07-25 14:11:55] 2025-07-25 18:11:23,766 | INFO     | architecture information:
[2025-07-25 14:11:55] 2025-07-25 18:11:23,767 | INFO     | executing command: cat /etc/os-release
[2025-07-25 14:11:55] 2025-07-25 18:11:23,784 | INFO     | cat /etc/os-release:
[2025-07-25 14:11:55] NAME="CentOS Linux"
[2025-07-25 14:11:55] VERSION="7 (Core)"
[2025-07-25 14:11:55] ID="centos"
[2025-07-25 14:11:55] ID_LIKE="rhel fedora"
[2025-07-25 14:11:55] VERSION_ID="7"
[2025-07-25 14:11:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 14:11:55] ANSI_COLOR="0;31"
[2025-07-25 14:11:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 14:11:55] HOME_URL="https://www.centos.org/"
[2025-07-25 14:11:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 14:11:55] 
[2025-07-25 14:11:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 14:11:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 14:11:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 14:11:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 14:11:55] 
[2025-07-25 14:11:55] 2025-07-25 18:11:23,785 | INFO     | ***************************************
[2025-07-25 14:11:55] 2025-07-25 18:11:24,288 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 14:11:55] 2025-07-25 18:11:24,307 | INFO     | sufficient remaining disk space (18563989504 B)
[2025-07-25 14:11:55] 2025-07-25 18:11:24,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 14:11:55] 2025-07-25 18:11:24,308 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 14:11:55] 2025-07-25 18:11:24,308 | INFO     | update_server=False
[2025-07-25 14:11:55] 2025-07-25 18:11:24,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 14:11:55] 2025-07-25 18:11:24,309 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 14:11:55] 2025-07-25 18:11:24,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 14:11:55] 2025-07-25 18:11:24,309 | INFO     | aborting loop
[2025-07-25 14:11:55] 2025-07-25 18:11:24,588 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 14:11:55] 2025-07-25 18:11:24,674 | INFO     | all data control threads have been joined
[2025-07-25 14:11:55] 2025-07-25 18:11:24,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 14:11:55] 2025-07-25 18:11:25,041 | INFO     | all job control threads have been joined
[2025-07-25 14:11:55] 2025-07-25 18:11:25,312 | INFO     | [job] queue monitor thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:25,314 | INFO     | [job] retrieve thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:25,317 | INFO     | [job] job monitor thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:25,384 | INFO     | [payload] validate_post thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:25,448 | INFO     | all payload control threads have been joined
[2025-07-25 14:11:55] 2025-07-25 18:11:25,563 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:25,586 | INFO     | [payload] failed_post thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:25,617 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:25,680 | INFO     | [data] control thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:25,881 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:26,046 | INFO     | [job] control thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:26,454 | INFO     | [payload] control thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:26,588 | INFO     | [data] copytool_in thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:26,690 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:26,733 | INFO     | [data] copytool_out thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:26,755 | INFO     | [job] validate thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:28,595 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 14:11:55] 2025-07-25 18:11:28,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051605694272)>', '<ExcThread(monitor, started 140050855601920)>']
[2025-07-25 14:11:55] 2025-07-25 18:11:33,760 | INFO     | all workflow threads have been joined
[2025-07-25 14:11:55] 2025-07-25 18:11:33,766 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 14:11:55] 2025-07-25 18:11:33,766 | INFO     | traces error code: 0
[2025-07-25 14:11:55] 2025-07-25 18:11:33,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 14:11:55] 2025-07-25 18:11:54,729 | INFO     | PID=28842 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 14:11:55] 2025-07-25 18:11:54,731 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 14:11:55] 2025-07-25 18:11:54,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 14:11:55] 2025-07-25 18:11:54,731 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 14:11:55] 2025-07-25 18:11:54,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 14:11:55] 2025-07-25 18:11:54,731 | INFO     | [monitor] control thread has ended
[2025-07-25 14:11:55] 2025-07-25 18:11:54,852 [wrapper] ==== pilot stdout END ====
[2025-07-25 14:11:55] 2025-07-25 18:11:54,857 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 14:11:55] 2025-07-25 18:11:54,861 [wrapper] pilotpid: 28842
[2025-07-25 14:11:55] 2025-07-25 18:11:54,866 [wrapper] Pilot exit status: 0
[2025-07-25 14:11:55] 2025-07-25 18:11:54,883 [wrapper] pandaids: 6744978358
[2025-07-25 14:11:55] 2025-07-25 18:11:54,928 [wrapper] cleanup supervisor_pilot 11664 28843
[2025-07-25 14:11:55] 2025-07-25 18:11:54,932 [wrapper] Test setup, not cleaning
[2025-07-25 14:11:55] 2025-07-25 18:11:54,937 [wrapper] apfmon messages muted
[2025-07-25 14:11:55] 2025-07-25 18:11:54,941 [wrapper] ==== wrapper stdout END ====
[2025-07-25 14:11:55] 2025-07-25 18:11:54,946 [wrapper] ==== wrapper stderr END ====
[2025-07-25 14:11:55]  *** Error codes and diagnostics ***
[2025-07-25 14:11:55]     "exeErrorCode": 0,
[2025-07-25 14:11:55]     "exeErrorDiag": "",
[2025-07-25 14:11:55]     "pilotErrorCode": 0,
[2025-07-25 14:11:55]     "pilotErrorDiag": "",
[2025-07-25 14:11:55]  *** Listing of results directory ***
[2025-07-25 14:11:55] total 440024
[2025-07-25 14:11:55] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 04:55 pilot3.tar.gz
[2025-07-25 14:11:55] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 05:02 queuedata.json
[2025-07-25 14:11:55] -rwx------ 1 boincer umatlas     36292 Jul 25 05:03 runpilot2-wrapper.sh
[2025-07-25 14:11:55] -rw-r--r-- 1 boincer umatlas       100 Jul 25 11:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 14:11:55] -rwxr-xr-x 1 boincer umatlas      7986 Jul 25 11:40 run_atlas
[2025-07-25 14:11:55] -rw-r--r-- 1 boincer umatlas       105 Jul 25 11:40 job.xml
[2025-07-25 14:11:55] -rw-r--r-- 2 boincer umatlas 233539758 Jul 25 11:40 EVNT.45743347._000976.pool.root.1
[2025-07-25 14:11:55] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 11:40 start_atlas.sh
[2025-07-25 14:11:55] drwxrwx--x 2 boincer umatlas      4096 Jul 25 11:40 shared
[2025-07-25 14:11:55] -rw-r--r-- 2 boincer umatlas    542893 Jul 25 11:40 input.tar.gz
[2025-07-25 14:11:55] -rw-r--r-- 1 boincer umatlas         0 Jul 25 11:40 boinc_lockfile
[2025-07-25 14:11:55] -rw-r--r-- 1 boincer umatlas      2561 Jul 25 11:40 pandaJob.out
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas    979317 Jul 25 11:40 agis_schedconf.cvmfs.json
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas   1593052 Jul 25 11:40 agis_ddmendpoints.agis.ALL.json
[2025-07-25 14:11:55] drwx------ 4 boincer umatlas      4096 Jul 25 11:40 pilot3
[2025-07-25 14:11:55] -rw-r--r-- 1 boincer umatlas      5825 Jul 25 14:01 init_data.xml
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas 210829960 Jul 25 14:10 HITS.45743349._018840.pool.root.1
[2025-07-25 14:11:55] -rw-r--r-- 1 boincer umatlas       530 Jul 25 14:10 boinc_task_state.xml
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas      1063 Jul 25 14:11 memory_monitor_summary.json
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas    351864 Jul 25 14:11 log.45743349._018840.job.log.tgz.1
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas      7847 Jul 25 14:11 heartbeat.json
[2025-07-25 14:11:55] -rw-r--r-- 1 boincer umatlas      8192 Jul 25 14:11 boinc_mmap_file
[2025-07-25 14:11:55] -rw-r--r-- 1 boincer umatlas        27 Jul 25 14:11 wrapper_checkpoint.txt
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas        95 Jul 25 14:11 pilot_heartbeat.json
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas       745 Jul 25 14:11 pilotlog.txt
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas    820152 Jul 25 14:11 log.45743349._018840.job.log.1
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas       357 Jul 25 14:11 output.list
[2025-07-25 14:11:55] -rw-r--r-- 1 boincer umatlas       620 Jul 25 14:11 runtime_log
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas   1187840 Jul 25 14:11 result.tar.gz
[2025-07-25 14:11:55] -rw-r--r-- 1 boincer umatlas      8660 Jul 25 14:11 runtime_log.err
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas       660 Jul 25 14:11 dr4LDmVWTz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmc9OLDmaXt60n.diag
[2025-07-25 14:11:55] -rw-r--r-- 1 boincer umatlas     21262 Jul 25 14:11 stderr.txt
[2025-07-25 14:11:55] HITS file was successfully produced:
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas 210829960 Jul 25 14:10 shared/HITS.pool.root.1
[2025-07-25 14:11:55]  *** Contents of shared directory: ***
[2025-07-25 14:11:55] total 435672
[2025-07-25 14:11:55] -rw-r--r-- 2 boincer umatlas 233539758 Jul 25 11:40 ATLAS.root_0
[2025-07-25 14:11:55] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 11:40 start_atlas.sh
[2025-07-25 14:11:55] -rw-r--r-- 2 boincer umatlas    542893 Jul 25 11:40 input.tar.gz
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas 210829960 Jul 25 14:10 HITS.pool.root.1
[2025-07-25 14:11:55] -rw------- 1 boincer umatlas   1187840 Jul 25 14:11 result.tar.gz
14:11:56 (25159): run_atlas exited; CPU time 63988.351961
14:11:56 (25159): called boinc_finish(0)

</stderr_txt>
]]>

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