Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:12:57 (540596): wrapper (7.7.26015): starting
11:12:57 (540596): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 11:12:57] Arguments: --nthreads 8
[2025-07-25 11:12:57] Threads: 8
[2025-07-25 11:12:57] Checking for CVMFS
[2025-07-25 11:12:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 11:12:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 11:12:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 11:12:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 11:12:58] 2.13.0.0 3724680 16231 229332 148744 2 693 29588541 32935936 27806 16776704 0 77959934 99.515 116232650 20186 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 11:12:58] CVMFS is ok
[2025-07-25 11:12:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 11:12:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 11:12:58] Further information can be found at the LHC@home message board.
[2025-07-25 11:12:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 11:12:58] Checking for apptainer binary...
[2025-07-25 11:12:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 11:12:58] Running /usr/bin/apptainer --version
[2025-07-25 11:12:58] apptainer version 1.4.1-1.el9
[2025-07-25 11:12:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 11:12:58] c7-4-31.aglt2.org
[2025-07-25 11:12:58] apptainer works
[2025-07-25 11:12:58] Set ATHENA_PROC_NUMBER=8
[2025-07-25 11:12:58] Set ATHENA_CORE_NUMBER=8
[2025-07-25 11:12:58] Starting ATLAS job with PandaID=6744978513
[2025-07-25 11:12:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 13:08:18]  *** The last 200 lines of the pilot log: ***
[2025-07-25 13:08:18] 2025-07-25 17:07:45,082 | INFO     | intersect: -71861918469.92711
[2025-07-25 13:08:18] 2025-07-25 17:07:45,083 | INFO     | chi2: 1.4974424206044357
[2025-07-25 13:08:18] 2025-07-25 17:07:45,083 | INFO     | sum of square deviations: 379832238.0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,083 | INFO     | sum of deviations: 16465600741.0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,083 | INFO     | mean x: 1753459670.0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,084 | INFO     | mean y: 2384242.570093458
[2025-07-25 13:08:18] 2025-07-25 17:07:45,084 | INFO     | -- intersect: -76009507201.10883
[2025-07-25 13:08:18] 2025-07-25 17:07:45,084 | INFO     | intersect: -76009507201.10883
[2025-07-25 13:08:18] 2025-07-25 17:07:45,084 | INFO     | chi2: 1.4980592362570202
[2025-07-25 13:08:18] 2025-07-25 17:07:45,084 | INFO     | current chi2=1.4980592362570202 (change=-0.04119127681287137 %)
[2025-07-25 13:08:18] 2025-07-25 17:07:45,084 | INFO     | right removable region: 106
[2025-07-25 13:08:18] 2025-07-25 17:07:45,084 | INFO     | sum of square deviations: 379832238.0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,085 | INFO     | sum of deviations: 547345131.0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,085 | INFO     | mean x: 1753459975.0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,085 | INFO     | mean y: 2434468.76635514
[2025-07-25 13:08:18] 2025-07-25 17:07:45,085 | INFO     | -- intersect: -2524333097.8129506
[2025-07-25 13:08:18] 2025-07-25 17:07:45,085 | INFO     | intersect: -2524333097.8129506
[2025-07-25 13:08:18] 2025-07-25 17:07:45,086 | INFO     | chi2: 0.017747576383492124
[2025-07-25 13:08:18] 2025-07-25 17:07:45,086 | INFO     | current chi2=0.017747576383492124 (change=98.81480742502751 %)
[2025-07-25 13:08:18] 2025-07-25 17:07:45,086 | INFO     | sum of square deviations: 329031285.5
[2025-07-25 13:08:18] 2025-07-25 17:07:45,087 | INFO     | sum of deviations: 2014950170.0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,087 | INFO     | mean x: 1753460127.5
[2025-07-25 13:08:18] 2025-07-25 17:07:45,087 | INFO     | mean y: 2430026.843137255
[2025-07-25 13:08:18] 2025-07-25 17:07:45,087 | INFO     | -- intersect: -10735560364.026081
[2025-07-25 13:08:18] 2025-07-25 17:07:45,087 | INFO     | intersect: -10735560364.026081
[2025-07-25 13:08:18] 2025-07-25 17:07:45,087 | INFO     | chi2: 0.007866295257665492
[2025-07-25 13:08:18] 2025-07-25 17:07:45,087 | INFO     | current chi2=0.007866295257665492 (change=55.67679164924 %)
[2025-07-25 13:08:18] 2025-07-25 17:07:45,087 | INFO     | sum of square deviations: 282974608.0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,088 | INFO     | sum of deviations: 1138643445.9999998
[2025-07-25 13:08:18] 2025-07-25 17:07:45,088 | INFO     | mean x: 1753460280.0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,088 | INFO     | mean y: 2432891.7422680412
[2025-07-25 13:08:18] 2025-07-25 17:07:45,088 | INFO     | -- intersect: -7053203901.094368
[2025-07-25 13:08:18] 2025-07-25 17:07:45,088 | INFO     | intersect: -7053203901.094368
[2025-07-25 13:08:18] 2025-07-25 17:07:45,089 | INFO     | chi2: 0.005699895902423448
[2025-07-25 13:08:18] 2025-07-25 17:07:45,089 | INFO     | current chi2=0.005699895902423448 (change=27.540275114018204 %)
[2025-07-25 13:08:18] 2025-07-25 17:07:45,089 | INFO     | sum of square deviations: 241429643.0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,089 | INFO     | sum of deviations: 713668524.0000001
[2025-07-25 13:08:18] 2025-07-25 17:07:45,089 | INFO     | mean x: 1753460432.5
[2025-07-25 13:08:18] 2025-07-25 17:07:45,089 | INFO     | mean y: 2434447.282608696
[2025-07-25 13:08:18] 2025-07-25 17:07:45,090 | INFO     | -- intersect: -5180812743.0993805
[2025-07-25 13:08:18] 2025-07-25 17:07:45,090 | INFO     | intersect: -5180812743.0993805
[2025-07-25 13:08:18] 2025-07-25 17:07:45,090 | INFO     | chi2: 0.005330518370289873
[2025-07-25 13:08:18] 2025-07-25 17:07:45,090 | INFO     | current chi2=0.005330518370289873 (change=6.480425931577555 %)
[2025-07-25 13:08:18] 2025-07-25 17:07:45,090 | INFO     | left removable region: 40
[2025-07-25 13:08:18] 2025-07-25 17:07:45,091 | INFO     | sum of square deviations: 89127252.5
[2025-07-25 13:08:18] 2025-07-25 17:07:45,091 | INFO     | sum of deviations: 174713942.99999997
[2025-07-25 13:08:18] 2025-07-25 17:07:45,091 | INFO     | mean x: 1753460859.5
[2025-07-25 13:08:18] 2025-07-25 17:07:45,091 | INFO     | mean y: 2432812.272727273
[2025-07-25 13:08:18] 2025-07-25 17:07:45,091 | INFO     | -- intersect: -3434833030.2866397
[2025-07-25 13:08:18] 2025-07-25 17:07:45,091 | INFO     | intersect: -3434833030.2866397
[2025-07-25 13:08:18] 2025-07-25 17:07:45,091 | INFO     | chi2: 0.0018557132851681913
[2025-07-25 13:08:18] 2025-07-25 17:07:45,091 | INFO     | -- intersect: -3434833030.2866397
[2025-07-25 13:08:18] 2025-07-25 17:07:45,092 | INFO     | current memory leak: 1.96 B/s (using 66 data points, chi2=0.00)
[2025-07-25 13:08:18] 2025-07-25 17:07:45,092 | INFO     | could have reported an average CPU frequency of 3079 MHz (7 samples)
[2025-07-25 13:08:18] 2025-07-25 17:07:45,092 | INFO     | ..............................
[2025-07-25 13:08:18] 2025-07-25 17:07:45,092 | INFO     | . Timing measurements:
[2025-07-25 13:08:18] 2025-07-25 17:07:45,092 | INFO     | . get job = 0 s
[2025-07-25 13:08:18] 2025-07-25 17:07:45,092 | INFO     | . initial setup = 3 s
[2025-07-25 13:08:18] 2025-07-25 17:07:45,093 | INFO     | . payload setup = 11 s
[2025-07-25 13:08:18] 2025-07-25 17:07:45,093 | INFO     | . stage-in = 0 s
[2025-07-25 13:08:18] 2025-07-25 17:07:45,093 | INFO     | . payload execution = 6809 s
[2025-07-25 13:08:18] 2025-07-25 17:07:45,093 | INFO     | . stage-out = 1 s
[2025-07-25 13:08:18] 2025-07-25 17:07:45,093 | INFO     | . log creation = 0 s
[2025-07-25 13:08:18] 2025-07-25 17:07:45,093 | INFO     | ..............................
[2025-07-25 13:08:18] 2025-07-25 17:07:45,193 | INFO     | 
[2025-07-25 13:08:18] 2025-07-25 17:07:45,193 | INFO     | job summary report
[2025-07-25 13:08:18] 2025-07-25 17:07:45,193 | INFO     | --------------------------------------------------
[2025-07-25 13:08:18] 2025-07-25 17:07:45,193 | INFO     | PanDA job id: 6744978513
[2025-07-25 13:08:18] 2025-07-25 17:07:45,193 | INFO     | task id: 45743349
[2025-07-25 13:08:18] 2025-07-25 17:07:45,193 | INFO     | errors: (none)
[2025-07-25 13:08:18] 2025-07-25 17:07:45,193 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 13:08:18] 2025-07-25 17:07:45,193 | INFO     | pilot state: finished 
[2025-07-25 13:08:18] 2025-07-25 17:07:45,193 | INFO     | transexitcode: 0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,193 | INFO     | exeerrorcode: 0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,193 | INFO     | exeerrordiag: 
[2025-07-25 13:08:18] 2025-07-25 17:07:45,194 | INFO     | exitcode: 0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,194 | INFO     | exitmsg: OK
[2025-07-25 13:08:18] 2025-07-25 17:07:45,194 | INFO     | cpuconsumptiontime: 38209 s
[2025-07-25 13:08:18] 2025-07-25 17:07:45,194 | INFO     | nevents: 400
[2025-07-25 13:08:18] 2025-07-25 17:07:45,194 | INFO     | neventsw: 0
[2025-07-25 13:08:18] 2025-07-25 17:07:45,194 | INFO     | pid: 563139
[2025-07-25 13:08:18] 2025-07-25 17:07:45,194 | INFO     | pgrp: 563139
[2025-07-25 13:08:18] 2025-07-25 17:07:45,194 | INFO     | corecount: 8
[2025-07-25 13:08:18] 2025-07-25 17:07:45,194 | INFO     | event service: False
[2025-07-25 13:08:18] 2025-07-25 17:07:45,194 | INFO     | sizes: {0: 2397473, 9: 2397735, 11: 2397763, 6824: 2424905, 6826: 2433903, 6829: 2433959, 6847: 2434281}
[2025-07-25 13:08:18] 2025-07-25 17:07:45,194 | INFO     | --------------------------------------------------
[2025-07-25 13:08:18] 2025-07-25 17:07:45,194 | INFO     | 
[2025-07-25 13:08:18] 2025-07-25 17:07:45,194 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-25 13:08:18] 2025-07-25 17:07:45,315 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,315 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,315 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,316 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,316 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,316 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,316 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,316 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,316 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,316 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,316 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,316 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,316 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,316 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,317 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 13:08:18] 2025-07-25 17:07:45,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,317 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 13:08:18] 2025-07-25 17:07:45,317 | INFO     | job 6744978513 has completed (purged errors)
[2025-07-25 13:08:18] 2025-07-25 17:07:45,317 | INFO     | overall cleanup function is called
[2025-07-25 13:08:18] 2025-07-25 17:07:46,344 | INFO     | --- collectZombieJob: --- 10, [563139]
[2025-07-25 13:08:18] 2025-07-25 17:07:46,344 | INFO     | zombie collector waiting for pid 563139
[2025-07-25 13:08:18] 2025-07-25 17:07:46,344 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 13:08:18] 2025-07-25 17:07:46,344 | INFO     | collected zombie processes
[2025-07-25 13:08:18] 2025-07-25 17:07:46,344 | INFO     | will attempt to kill all subprocesses of pid=563139
[2025-07-25 13:08:18] 2025-07-25 17:07:47,017 | INFO     | process IDs to be killed: [563139] (in reverse order)
[2025-07-25 13:08:18] 2025-07-25 17:07:47,249 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 13:08:18] 2025-07-25 17:07:47,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 13:08:18] 2025-07-25 17:07:47,270 | INFO     | did not find any defunct processes belonging to 563139
[2025-07-25 13:08:18] 2025-07-25 17:07:47,290 | INFO     | did not find any defunct processes belonging to 563139
[2025-07-25 13:08:18] 2025-07-25 17:07:47,290 | INFO     | ready for new job
[2025-07-25 13:08:18] 2025-07-25 17:07:47,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 13:08:18] 2025-07-25 17:07:47,292 | INFO     | ***************************************
[2025-07-25 13:08:18] 2025-07-25 17:07:47,292 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 13:08:18] 2025-07-25 17:07:47,292 | INFO     | ***************************************
[2025-07-25 13:08:18] 2025-07-25 17:07:47,292 | INFO     | 
[2025-07-25 13:08:18] 2025-07-25 17:07:47,329 | INFO     | architecture information:
[2025-07-25 13:08:18] 2025-07-25 17:07:47,333 | INFO     | executing command: cat /etc/os-release
[2025-07-25 13:08:18] 2025-07-25 17:07:47,350 | INFO     | cat /etc/os-release:
[2025-07-25 13:08:18] NAME="CentOS Linux"
[2025-07-25 13:08:18] VERSION="7 (Core)"
[2025-07-25 13:08:18] ID="centos"
[2025-07-25 13:08:18] ID_LIKE="rhel fedora"
[2025-07-25 13:08:18] VERSION_ID="7"
[2025-07-25 13:08:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 13:08:18] ANSI_COLOR="0;31"
[2025-07-25 13:08:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 13:08:18] HOME_URL="https://www.centos.org/"
[2025-07-25 13:08:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 13:08:18] 
[2025-07-25 13:08:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 13:08:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 13:08:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 13:08:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 13:08:18] 
[2025-07-25 13:08:18] 2025-07-25 17:07:47,351 | INFO     | ***************************************
[2025-07-25 13:08:18] 2025-07-25 17:07:47,853 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-25 13:08:18] 2025-07-25 17:07:47,873 | INFO     | sufficient remaining disk space (75947311104 B)
[2025-07-25 13:08:18] 2025-07-25 17:07:47,873 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 13:08:18] 2025-07-25 17:07:47,873 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 13:08:18] 2025-07-25 17:07:47,873 | INFO     | update_server=False
[2025-07-25 13:08:18] 2025-07-25 17:07:47,873 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 13:08:18] 2025-07-25 17:07:47,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 13:08:18] 2025-07-25 17:07:47,874 | INFO     | aborting loop
[2025-07-25 13:08:18] 2025-07-25 17:07:47,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 13:08:18] 2025-07-25 17:07:48,488 | INFO     | all data control threads have been joined
[2025-07-25 13:08:18] 2025-07-25 17:07:48,794 | INFO     | all job control threads have been joined
[2025-07-25 13:08:18] 2025-07-25 17:07:48,890 | INFO     | [job] job monitor thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:48,890 | INFO     | [job] retrieve thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:48,921 | INFO     | all payload control threads have been joined
[2025-07-25 13:08:18] 2025-07-25 17:07:48,923 | INFO     | [payload] validate_post thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:49,016 | INFO     | [job] validate thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:49,093 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:49,468 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:49,509 | INFO     | [data] control thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:49,526 | INFO     | [payload] failed_post thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:49,545 | INFO     | [data] copytool_in thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:49,800 | INFO     | [job] control thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:49,888 | INFO     | [data] copytool_out thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:49,927 | INFO     | [payload] control thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:50,190 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:50,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 13:08:18] 2025-07-25 17:07:50,811 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 13:08:18] 2025-07-25 17:07:51,226 | INFO     | [job] queue monitor thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:54,824 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:58,654 | INFO     | job.realtimelogging is not enabled
[2025-07-25 13:08:18] 2025-07-25 17:07:59,661 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 13:08:18] 2025-07-25 17:07:59,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140676647200576)>', '<ExcThread(monitor, started 140675874023168)>']
[2025-07-25 13:08:18] 2025-07-25 17:08:04,694 | INFO     | all workflow threads have been joined
[2025-07-25 13:08:18] 2025-07-25 17:08:04,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 13:08:18] 2025-07-25 17:08:04,695 | INFO     | traces error code: 0
[2025-07-25 13:08:18] 2025-07-25 17:08:04,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 13:08:18] 2025-07-25 17:08:17,355 | INFO     | PID=549634 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-25 13:08:18] 2025-07-25 17:08:17,356 | INFO     | .. there are 31 such processes running
[2025-07-25 13:08:18] 2025-07-25 17:08:17,356 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 13:08:18] 2025-07-25 17:08:17,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 13:08:18] 2025-07-25 17:08:17,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 13:08:18] 2025-07-25 17:08:17,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 13:08:18] 2025-07-25 17:08:17,357 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 13:08:18] 2025-07-25 17:08:17,357 | INFO     | [monitor] control thread has ended
[2025-07-25 13:08:18] 2025-07-25 17:08:17,509 [wrapper] ==== pilot stdout END ====
[2025-07-25 13:08:18] 2025-07-25 17:08:17,520 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 13:08:18] 2025-07-25 17:08:17,566 [wrapper] pilotpid: 549634
[2025-07-25 13:08:18] 2025-07-25 17:08:17,592 [wrapper] Pilot exit status: 0
[2025-07-25 13:08:18] 2025-07-25 17:08:17,677 [wrapper] pandaids: 6744978513
[2025-07-25 13:08:18] 2025-07-25 17:08:17,845 [wrapper] cleanup supervisor_pilot 1247282 549635
[2025-07-25 13:08:18] 2025-07-25 17:08:17,898 [wrapper] Test setup, not cleaning
[2025-07-25 13:08:18] 2025-07-25 17:08:17,930 [wrapper] apfmon messages muted
[2025-07-25 13:08:18] 2025-07-25 17:08:17,953 [wrapper] ==== wrapper stdout END ====
[2025-07-25 13:08:18] 2025-07-25 17:08:17,969 [wrapper] ==== wrapper stderr END ====
[2025-07-25 13:08:18]  *** Error codes and diagnostics ***
[2025-07-25 13:08:18]     "exeErrorCode": 0,
[2025-07-25 13:08:18]     "exeErrorDiag": "",
[2025-07-25 13:08:18]     "pilotErrorCode": 0,
[2025-07-25 13:08:18]     "pilotErrorDiag": "",
[2025-07-25 13:08:18]  *** Listing of results directory ***
[2025-07-25 13:08:18] total 358908
[2025-07-25 13:08:18] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 05:16 pilot3.tar.gz
[2025-07-25 13:08:18] -rwx------. 1 boincer umatlas     36292 Jul 25 05:18 runpilot2-wrapper.sh
[2025-07-25 13:08:18] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 05:18 queuedata.json
[2025-07-25 13:08:18] -rw-r--r--. 1 boincer umatlas       100 Jul 25 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 13:08:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 11:12 run_atlas
[2025-07-25 13:08:18] -rw-r--r--. 1 boincer umatlas       105 Jul 25 11:12 job.xml
[2025-07-25 13:08:18] -rw-r--r--. 2 boincer umatlas 145817885 Jul 25 11:12 EVNT.45743347._000984.pool.root.1
[2025-07-25 13:08:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 11:12 start_atlas.sh
[2025-07-25 13:08:18] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 11:12 shared
[2025-07-25 13:08:18] -rw-r--r--. 2 boincer umatlas    542894 Jul 25 11:12 input.tar.gz
[2025-07-25 13:08:18] -rw-r--r--. 1 boincer umatlas         0 Jul 25 11:12 boinc_lockfile
[2025-07-25 13:08:18] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 11:12 pandaJob.out
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas    979325 Jul 25 11:13 agis_schedconf.cvmfs.json
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas   1593052 Jul 25 11:13 agis_ddmendpoints.agis.ALL.json
[2025-07-25 13:08:18] drwx------. 4 boincer umatlas      4096 Jul 25 11:13 pilot3
[2025-07-25 13:08:18] -rw-r--r--. 1 boincer umatlas      6934 Jul 25 13:02 init_data.xml
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas 215935466 Jul 25 13:06 HITS.45743349._018995.pool.root.1
[2025-07-25 13:08:18] -rw-r--r--. 1 boincer umatlas       529 Jul 25 13:06 boinc_task_state.xml
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas      1033 Jul 25 13:07 memory_monitor_summary.json
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas    325856 Jul 25 13:07 log.45743349._018995.job.log.tgz.1
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas      7766 Jul 25 13:07 heartbeat.json
[2025-07-25 13:08:18] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 13:08 boinc_mmap_file
[2025-07-25 13:08:18] -rw-r--r--. 1 boincer umatlas        27 Jul 25 13:08 wrapper_checkpoint.txt
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas        95 Jul 25 13:08 pilot_heartbeat.json
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas       892 Jul 25 13:08 pilotlog.txt
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas    619540 Jul 25 13:08 log.45743349._018995.job.log.1
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas       357 Jul 25 13:08 output.list
[2025-07-25 13:08:18] -rw-r--r--. 1 boincer umatlas       620 Jul 25 13:08 runtime_log
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas    962560 Jul 25 13:08 result.tar.gz
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas       652 Jul 25 13:08 XSqMDmGkTz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm7jyKDmdk7wun.diag
[2025-07-25 13:08:18] -rw-r--r--. 1 boincer umatlas      8655 Jul 25 13:08 runtime_log.err
[2025-07-25 13:08:18] -rw-r--r--. 1 boincer umatlas     20889 Jul 25 13:08 stderr.txt
[2025-07-25 13:08:18] HITS file was successfully produced:
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas 215935466 Jul 25 13:06 shared/HITS.pool.root.1
[2025-07-25 13:08:18]  *** Contents of shared directory: ***
[2025-07-25 13:08:18] total 354776
[2025-07-25 13:08:18] -rw-r--r--. 2 boincer umatlas 145817885 Jul 25 11:12 ATLAS.root_0
[2025-07-25 13:08:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 11:12 start_atlas.sh
[2025-07-25 13:08:18] -rw-r--r--. 2 boincer umatlas    542894 Jul 25 11:12 input.tar.gz
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas 215935466 Jul 25 13:06 HITS.pool.root.1
[2025-07-25 13:08:18] -rw-------. 1 boincer umatlas    962560 Jul 25 13:08 result.tar.gz
13:08:20 (540596): run_atlas exited; CPU time 38405.222816
13:08:20 (540596): called boinc_finish(0)

</stderr_txt>
]]>

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