Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:20:49 (1353): wrapper (7.7.26015): starting
06:20:49 (1353): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 06:20:49] Arguments: --nthreads 8
[2025-07-26 06:20:49] Threads: 8
[2025-07-26 06:20:49] Checking for CVMFS
[2025-07-26 06:20:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 06:20:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 06:20:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 06:20:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 06:20:53] 2.11.2.0 25395 107620 136976 148764 3 109 16885383 25165825 4353 130560 0 83042875 99.866 48815983 3569 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-26 06:20:53] CVMFS is ok
[2025-07-26 06:20:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 06:20:53] Checking for apptainer binary...
[2025-07-26 06:20:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 06:20:53] Running /usr/bin/apptainer --version
[2025-07-26 06:20:53] apptainer version 1.3.2-1.el7
[2025-07-26 06:20:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 06:21:04] cg-vwn454.simple-grid.lan
[2025-07-26 06:21:04] apptainer works
[2025-07-26 06:21:04] Set ATHENA_PROC_NUMBER=8
[2025-07-26 06:21:04] Set ATHENA_CORE_NUMBER=8
[2025-07-26 06:21:04] Starting ATLAS job with PandaID=6744978276
[2025-07-26 06:21:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 13:22:28]  *** The last 200 lines of the pilot log: ***
[2025-07-26 13:22:28] 2025-07-26 08:29:05,166 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 13:22:28] 2025-07-26 08:29:05,166 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 13:22:28] 2025-07-26 08:29:05,166 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 13:22:28] 2025-07-26 08:29:05,171 | INFO     | fitting pss+swap vs Time
[2025-07-26 13:22:28] 2025-07-26 08:29:05,172 | INFO     | sum of square deviations: 4340323240.0
[2025-07-26 13:22:28] 2025-07-26 08:29:05,174 | INFO     | sum of deviations: -43735949763.000015
[2025-07-26 13:22:28] 2025-07-26 08:29:05,174 | INFO     | mean x: 1753511066.0
[2025-07-26 13:22:28] 2025-07-26 08:29:05,174 | INFO     | mean y: 2529508.3817427387
[2025-07-26 13:22:28] 2025-07-26 08:29:05,174 | INFO     | -- intersect: 17672059552.74789
[2025-07-26 13:22:28] 2025-07-26 08:29:05,174 | INFO     | intersect: 17672059552.74789
[2025-07-26 13:22:28] 2025-07-26 08:29:05,174 | INFO     | chi2: 2.5556051086178315
[2025-07-26 13:22:28] 2025-07-26 08:29:05,175 | INFO     | sum of square deviations: 4075741535.0
[2025-07-26 13:22:28] 2025-07-26 08:29:05,176 | INFO     | sum of deviations: -26663472740.5
[2025-07-26 13:22:28] 2025-07-26 08:29:05,177 | INFO     | mean x: 1753510913.5
[2025-07-26 13:22:28] 2025-07-26 08:29:05,177 | INFO     | mean y: 2539193.563559322
[2025-07-26 13:22:28] 2025-07-26 08:29:05,177 | INFO     | -- intersect: 11473995379.088459
[2025-07-26 13:22:28] 2025-07-26 08:29:05,177 | INFO     | intersect: 11473995379.088459
[2025-07-26 13:22:28] 2025-07-26 08:29:05,177 | INFO     | chi2: 1.7880749854395395
[2025-07-26 13:22:28] 2025-07-26 08:29:05,177 | INFO     | current chi2=1.7880749854395395 (change=30.033205074996953 %)
[2025-07-26 13:22:28] 2025-07-26 08:29:05,178 | INFO     | sum of square deviations: 3822136780.0
[2025-07-26 13:22:28] 2025-07-26 08:29:05,180 | INFO     | sum of deviations: -25810302798.00003
[2025-07-26 13:22:28] 2025-07-26 08:29:05,180 | INFO     | mean x: 1753510761.0
[2025-07-26 13:22:28] 2025-07-26 08:29:05,180 | INFO     | mean y: 2539707.298701299
[2025-07-26 13:22:28] 2025-07-26 08:29:05,180 | INFO     | -- intersect: 11843728630.150768
[2025-07-26 13:22:28] 2025-07-26 08:29:05,180 | INFO     | intersect: 11843728630.150768
[2025-07-26 13:22:28] 2025-07-26 08:29:05,180 | INFO     | chi2: 1.78637334155229
[2025-07-26 13:22:28] 2025-07-26 08:29:05,180 | INFO     | current chi2=1.78637334155229 (change=0.09516624868118592 %)
[2025-07-26 13:22:28] 2025-07-26 08:29:05,181 | INFO     | right removable region: 230
[2025-07-26 13:22:28] 2025-07-26 08:29:05,181 | INFO     | sum of square deviations: 4075741535.0
[2025-07-26 13:22:28] 2025-07-26 08:29:05,183 | INFO     | sum of deviations: -82667162424.0
[2025-07-26 13:22:28] 2025-07-26 08:29:05,183 | INFO     | mean x: 1753511218.5
[2025-07-26 13:22:28] 2025-07-26 08:29:05,183 | INFO     | mean y: 2551749.9576271186
[2025-07-26 13:22:28] 2025-07-26 08:29:05,183 | INFO     | -- intersect: 35568545193.662506
[2025-07-26 13:22:28] 2025-07-26 08:29:05,183 | INFO     | intersect: 35568545193.662506
[2025-07-26 13:22:28] 2025-07-26 08:29:05,184 | INFO     | chi2: 1.0262924230231554
[2025-07-26 13:22:28] 2025-07-26 08:29:05,184 | INFO     | current chi2=1.0262924230231554 (change=59.84150995932962 %)
[2025-07-26 13:22:28] 2025-07-26 08:29:05,184 | INFO     | sum of square deviations: 3822136780.0
[2025-07-26 13:22:28] 2025-07-26 08:29:05,186 | INFO     | sum of deviations: -79810489175.00002
[2025-07-26 13:22:28] 2025-07-26 08:29:05,186 | INFO     | mean x: 1753511371.0
[2025-07-26 13:22:28] 2025-07-26 08:29:05,186 | INFO     | mean y: 2550005.74025974
[2025-07-26 13:22:28] 2025-07-26 08:29:05,186 | INFO     | -- intersect: 36617827885.31288
[2025-07-26 13:22:28] 2025-07-26 08:29:05,186 | INFO     | intersect: 36617827885.31288
[2025-07-26 13:22:28] 2025-07-26 08:29:05,187 | INFO     | chi2: 1.01565051988736
[2025-07-26 13:22:28] 2025-07-26 08:29:05,187 | INFO     | current chi2=1.01565051988736 (change=1.0369269905011544 %)
[2025-07-26 13:22:28] 2025-07-26 08:29:05,187 | INFO     | left removable region: 20
[2025-07-26 13:22:28] 2025-07-26 08:29:05,187 | INFO     | sum of square deviations: 2871616632.5
[2025-07-26 13:22:28] 2025-07-26 08:29:05,189 | INFO     | sum of deviations: -47776577105.499985
[2025-07-26 13:22:28] 2025-07-26 08:29:05,189 | INFO     | mean x: 1753511340.5
[2025-07-26 13:22:28] 2025-07-26 08:29:05,189 | INFO     | mean y: 2552485.6428571427
[2025-07-26 13:22:28] 2025-07-26 08:29:05,189 | INFO     | -- intersect: 29176631231.604046
[2025-07-26 13:22:28] 2025-07-26 08:29:05,189 | INFO     | intersect: 29176631231.604046
[2025-07-26 13:22:28] 2025-07-26 08:29:05,190 | INFO     | chi2: 0.20895783430004047
[2025-07-26 13:22:28] 2025-07-26 08:29:05,190 | INFO     | -- intersect: 29176631231.604046
[2025-07-26 13:22:28] 2025-07-26 08:29:05,190 | INFO     | current memory leak: -16.64 B/s (using 210 data points, chi2=0.21)
[2025-07-26 13:22:28] 2025-07-26 08:29:05,191 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2025-07-26 13:22:28] 2025-07-26 08:29:05,191 | INFO     | ..............................
[2025-07-26 13:22:28] 2025-07-26 08:29:05,191 | INFO     | . Timing measurements:
[2025-07-26 13:22:28] 2025-07-26 08:29:05,191 | INFO     | . get job = 0 s
[2025-07-26 13:22:28] 2025-07-26 08:29:05,191 | INFO     | . initial setup = 1 s
[2025-07-26 13:22:28] 2025-07-26 08:29:05,191 | INFO     | . payload setup = 14 s
[2025-07-26 13:22:28] 2025-07-26 08:29:05,191 | INFO     | . stage-in = 0 s
[2025-07-26 13:22:28] 2025-07-26 08:29:05,191 | INFO     | . payload execution = 14714 s
[2025-07-26 13:22:28] 2025-07-26 08:29:05,191 | INFO     | . stage-out = 3 s
[2025-07-26 13:22:28] 2025-07-26 08:29:05,192 | INFO     | . log creation = 1 s
[2025-07-26 13:22:28] 2025-07-26 08:29:05,192 | INFO     | ..............................
[2025-07-26 13:22:28] 2025-07-26 08:29:05,316 | INFO     | 
[2025-07-26 13:22:28] 2025-07-26 08:29:05,316 | INFO     | job summary report
[2025-07-26 13:22:28] 2025-07-26 08:29:05,316 | INFO     | --------------------------------------------------
[2025-07-26 13:22:28] 2025-07-26 08:29:05,316 | INFO     | PanDA job id: 6744978276
[2025-07-26 13:22:28] 2025-07-26 08:29:05,316 | INFO     | task id: 45743349
[2025-07-26 13:22:28] 2025-07-26 08:29:05,316 | INFO     | errors: (none)
[2025-07-26 13:22:28] 2025-07-26 08:29:05,316 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 13:22:28] 2025-07-26 08:29:05,316 | INFO     | pilot state: finished 
[2025-07-26 13:22:28] 2025-07-26 08:29:05,317 | INFO     | transexitcode: 0
[2025-07-26 13:22:28] 2025-07-26 08:29:05,317 | INFO     | exeerrorcode: 0
[2025-07-26 13:22:28] 2025-07-26 08:29:05,317 | INFO     | exeerrordiag: 
[2025-07-26 13:22:28] 2025-07-26 08:29:05,317 | INFO     | exitcode: 0
[2025-07-26 13:22:28] 2025-07-26 08:29:05,317 | INFO     | exitmsg: OK
[2025-07-26 13:22:28] 2025-07-26 08:29:05,317 | INFO     | cpuconsumptiontime: 57040 s
[2025-07-26 13:22:28] 2025-07-26 08:29:05,317 | INFO     | nevents: 400
[2025-07-26 13:22:28] 2025-07-26 08:29:05,317 | INFO     | neventsw: 0
[2025-07-26 13:22:28] 2025-07-26 08:29:05,317 | INFO     | pid: 12026
[2025-07-26 13:22:28] 2025-07-26 08:29:05,317 | INFO     | pgrp: 12026
[2025-07-26 13:22:28] 2025-07-26 08:29:05,318 | INFO     | corecount: 8
[2025-07-26 13:22:28] 2025-07-26 08:29:05,318 | INFO     | event service: False
[2025-07-26 13:22:28] 2025-07-26 08:29:05,318 | INFO     | sizes: {0: 2397302, 1: 2397501, 9: 2397763, 12: 2397791, 14732: 2428039, 14737: 2437037, 14739: 2437221, 14841: 2437415}
[2025-07-26 13:22:28] 2025-07-26 08:29:05,318 | INFO     | --------------------------------------------------
[2025-07-26 13:22:28] 2025-07-26 08:29:05,318 | INFO     | 
[2025-07-26 13:22:28] 2025-07-26 08:29:05,318 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-07-26 13:22:28] 2025-07-26 08:29:05,759 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,761 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 13:22:28] 2025-07-26 08:29:05,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 13:22:28] 2025-07-26 08:29:05,761 | INFO     | job 6744978276 has completed (purged errors)
[2025-07-26 13:22:28] 2025-07-26 08:29:05,761 | INFO     | overall cleanup function is called
[2025-07-26 13:22:28] 2025-07-26 08:29:06,769 | INFO     | --- collectZombieJob: --- 10, [12026]
[2025-07-26 13:22:28] 2025-07-26 08:29:06,769 | INFO     | zombie collector waiting for pid 12026
[2025-07-26 13:22:28] 2025-07-26 08:29:06,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 13:22:28] 2025-07-26 08:29:06,769 | INFO     | collected zombie processes
[2025-07-26 13:22:28] 2025-07-26 08:29:06,769 | INFO     | will attempt to kill all subprocesses of pid=12026
[2025-07-26 13:22:28] 2025-07-26 08:29:06,916 | INFO     | process IDs to be killed: [12026] (in reverse order)
[2025-07-26 13:22:28] 2025-07-26 08:29:07,491 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 13:22:28] 2025-07-26 08:29:07,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 13:22:28] 2025-07-26 08:29:07,494 | INFO     | did not find any defunct processes belonging to 12026
[2025-07-26 13:22:28] 2025-07-26 08:29:07,497 | INFO     | did not find any defunct processes belonging to 12026
[2025-07-26 13:22:28] 2025-07-26 08:29:07,498 | INFO     | ready for new job
[2025-07-26 13:22:28] 2025-07-26 08:29:07,498 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 13:22:28] 2025-07-26 08:29:07,500 | INFO     | ***************************************
[2025-07-26 13:22:28] 2025-07-26 08:29:07,500 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 13:22:28] 2025-07-26 08:29:07,500 | INFO     | ***************************************
[2025-07-26 13:22:28] 2025-07-26 08:29:07,500 | INFO     | 
[2025-07-26 13:22:28] 2025-07-26 08:29:07,501 | INFO     | pilot is running in a VM
[2025-07-26 13:22:28] 2025-07-26 08:29:07,501 | INFO     | architecture information:
[2025-07-26 13:22:28] 2025-07-26 08:29:07,502 | INFO     | executing command: cat /etc/os-release
[2025-07-26 13:22:28] 2025-07-26 08:29:07,637 | INFO     | cat /etc/os-release:
[2025-07-26 13:22:28] NAME="CentOS Linux"
[2025-07-26 13:22:28] VERSION="7 (Core)"
[2025-07-26 13:22:28] ID="centos"
[2025-07-26 13:22:28] ID_LIKE="rhel fedora"
[2025-07-26 13:22:28] VERSION_ID="7"
[2025-07-26 13:22:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 13:22:28] ANSI_COLOR="0;31"
[2025-07-26 13:22:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 13:22:28] HOME_URL="https://www.centos.org/"
[2025-07-26 13:22:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 13:22:28] 
[2025-07-26 13:22:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 13:22:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 13:22:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 13:22:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 13:22:28] 
[2025-07-26 13:22:28] 2025-07-26 08:29:07,638 | INFO     | ***************************************
[2025-07-26 13:22:28] 2025-07-26 08:29:08,141 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-07-26 13:22:28] 2025-07-26 08:29:08,392 | INFO     | sufficient remaining disk space (495975399424 B)
[2025-07-26 13:22:28] 2025-07-26 08:29:08,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 13:22:28] 2025-07-26 08:29:08,393 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 13:22:28] 2025-07-26 08:29:08,393 | INFO     | update_server=False
[2025-07-26 13:22:28] 2025-07-26 08:29:08,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 13:22:28] 2025-07-26 08:29:08,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 13:22:28] 2025-07-26 08:29:08,938 | INFO     | all job control threads have been joined
[2025-07-26 13:22:28] 2025-07-26 08:29:09,050 | INFO     | all data control threads have been joined
[2025-07-26 13:22:28] 2025-07-26 08:29:09,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:22:28] 2025-07-26 08:29:09,237 | INFO     | aborting loop
[2025-07-26 13:22:28] 2025-07-26 08:29:09,399 | INFO     | [job] retrieve thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:09,512 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:09,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 13:22:28] 2025-07-26 08:29:09,889 | INFO     | all payload control threads have been joined
[2025-07-26 13:22:28] 2025-07-26 08:29:09,944 | INFO     | [job] control thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:10,056 | INFO     | [data] control thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:10,243 | INFO     | [job] job monitor thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:10,278 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:10,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:22:28] 2025-07-26 08:29:10,332 | INFO     | [data] copytool_in thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:10,406 | INFO     | [payload] validate_post thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:10,450 | INFO     | [job] validate thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:10,471 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:10,795 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:10,895 | INFO     | [payload] control thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:10,969 | INFO     | [payload] failed_post thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:11,338 | INFO     | [job] queue monitor thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:11,596 | INFO     | [data] copytool_out thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:12,896 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 13:22:28] 2025-07-26 08:29:14,352 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140150781232960)>', '<ExcThread(monitor, started 140150201898752)>']
[2025-07-26 13:22:28] 2025-07-26 08:29:19,378 | INFO     | all workflow threads have been joined
[2025-07-26 13:22:28] 2025-07-26 08:29:19,378 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 13:22:28] 2025-07-26 08:29:19,378 | INFO     | traces error code: 0
[2025-07-26 13:22:28] 2025-07-26 08:29:19,378 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 13:22:28] 2025-07-26 08:29:37,997 | INFO     | PID=5425 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 13:22:28] 2025-07-26 08:29:37,997 | INFO     | .. there are 9 such processes running
[2025-07-26 13:22:28] 2025-07-26 08:29:37,999 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 13:22:28] 2025-07-26 08:29:37,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 13:22:28] 2025-07-26 08:29:37,999 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 13:22:28] 2025-07-26 08:29:37,999 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 13:22:28] 2025-07-26 08:29:37,999 | INFO     | [monitor] control thread has ended
[2025-07-26 13:22:28] 2025-07-26 08:29:38,387 [wrapper] ==== pilot stdout END ====
[2025-07-26 13:22:28] 2025-07-26 08:29:38,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 13:22:28] 2025-07-26 08:29:38,613 [wrapper] pilotpid: 5425
[2025-07-26 13:22:28] 2025-07-26 08:29:38,713 [wrapper] Pilot exit status: 0
[2025-07-26 13:22:28] 2025-07-26 08:29:39,171 [wrapper] pandaids: 6744978276
[2025-07-26 13:22:28] 2025-07-26 08:29:39,583 [wrapper] cleanup supervisor_pilot 21524 5426
[2025-07-26 13:22:28] 2025-07-26 08:29:39,630 [wrapper] Test setup, not cleaning
[2025-07-26 13:22:28] 2025-07-26 08:29:39,741 [wrapper] apfmon messages muted
[2025-07-26 13:22:28] 2025-07-26 08:29:39,847 [wrapper] ==== wrapper stdout END ====
[2025-07-26 13:22:28] 2025-07-26 08:29:39,946 [wrapper] ==== wrapper stderr END ====
[2025-07-26 13:22:28]  *** Error codes and diagnostics ***
[2025-07-26 13:22:28]     "exeErrorCode": 0,
[2025-07-26 13:22:28]     "exeErrorDiag": "",
[2025-07-26 13:22:28]     "pilotErrorCode": 0,
[2025-07-26 13:22:28]     "pilotErrorDiag": "",
[2025-07-26 13:22:28]  *** Listing of results directory ***
[2025-07-26 13:22:28] total 435564
[2025-07-26 13:22:28] -rw-r--r--. 1 boinc boinc    530466 Jul 25 10:55 pilot3.tar.gz
[2025-07-26 13:22:28] -rw-r--r--. 1 boinc boinc      5112 Jul 25 10:57 queuedata.json
[2025-07-26 13:22:28] -rwx------. 1 boinc boinc     36292 Jul 25 10:57 runpilot2-wrapper.sh
[2025-07-26 13:22:28] -rw-r--r--. 1 boinc boinc       100 Jul 26 06:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 13:22:28] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 06:20 run_atlas
[2025-07-26 13:22:28] -rw-r--r--. 1 boinc boinc       105 Jul 26 06:20 job.xml
[2025-07-26 13:22:28] -rw-r--r--. 1 boinc boinc      6391 Jul 26 06:20 init_data.xml
[2025-07-26 13:22:28] -rw-r--r--. 2 boinc boinc 232111328 Jul 26 06:20 EVNT.45743347._000974.pool.root.1
[2025-07-26 13:22:28] -rw-r--r--. 2 boinc boinc     15095 Jul 26 06:20 start_atlas.sh
[2025-07-26 13:22:28] drwxrwx--x. 2 boinc boinc        68 Jul 26 06:20 shared
[2025-07-26 13:22:28] -rw-r--r--. 2 boinc boinc    542893 Jul 26 06:20 input.tar.gz
[2025-07-26 13:22:28] -rw-r--r--. 1 boinc boinc         0 Jul 26 06:20 boinc_lockfile
[2025-07-26 13:22:28] -rw-r--r--. 1 boinc boinc      2562 Jul 26 06:21 pandaJob.out
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc    980001 Jul 26 06:21 agis_schedconf.cvmfs.json
[2025-07-26 13:22:28] drwx------. 4 boinc boinc      4096 Jul 26 06:21 pilot3
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc 206724560 Jul 26 10:26 HITS.45743349._018779.pool.root.1
[2025-07-26 13:22:28] -rw-r--r--. 1 boinc boinc       531 Jul 26 10:26 boinc_task_state.xml
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc      1016 Jul 26 10:27 memory_monitor_summary.json
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc   1593052 Jul 26 10:27 agis_ddmendpoints.agis.ALL.json
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc    384969 Jul 26 10:27 log.45743349._018779.job.log.tgz.1
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc      7780 Jul 26 10:29 heartbeat.json
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc        95 Jul 26 10:29 pilot_heartbeat.json
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc       819 Jul 26 10:29 pilotlog.txt
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc   1280279 Jul 26 10:29 log.45743349._018779.job.log.1
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc       357 Jul 26 10:29 output.list
[2025-07-26 13:22:28] -rw-r--r--. 1 boinc boinc       620 Jul 26 10:29 runtime_log
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc   1679360 Jul 26 10:29 result.tar.gz
[2025-07-26 13:22:28] -rw-r--r--. 1 boinc boinc      8660 Jul 26 10:29 runtime_log.err
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc       657 Jul 26 10:29 pjqKDmVQTz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDjyKDm8kEfom.diag
[2025-07-26 13:22:28] -rw-r--r--. 1 boinc boinc      8192 Jul 26 13:22 boinc_mmap_file
[2025-07-26 13:22:28] -rw-r--r--. 1 boinc boinc        28 Jul 26 13:22 wrapper_checkpoint.txt
[2025-07-26 13:22:28] -rw-r--r--. 1 boinc boinc     20568 Jul 26 13:22 stderr.txt
[2025-07-26 13:22:28] HITS file was successfully produced:
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc 206724560 Jul 26 10:26 shared/HITS.pool.root.1
[2025-07-26 13:22:28]  *** Contents of shared directory: ***
[2025-07-26 13:22:28] total 430740
[2025-07-26 13:22:28] -rw-r--r--. 2 boinc boinc 232111328 Jul 26 06:20 ATLAS.root_0
[2025-07-26 13:22:28] -rw-r--r--. 2 boinc boinc     15095 Jul 26 06:20 start_atlas.sh
[2025-07-26 13:22:28] -rw-r--r--. 2 boinc boinc    542893 Jul 26 06:20 input.tar.gz
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc 206724560 Jul 26 10:26 HITS.pool.root.1
[2025-07-26 13:22:28] -rw-------. 1 boinc boinc   1679360 Jul 26 10:29 result.tar.gz
13:22:30 (1353): run_atlas exited; CPU time 57215.285522
13:22:30 (1353): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN