Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:07:09 (2702493): wrapper (7.7.26015): starting
11:07:09 (2702493): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 11:07:09] Arguments: --nthreads 8
[2025-07-25 11:07:09] Threads: 8
[2025-07-25 11:07:09] Checking for CVMFS
[2025-07-25 11:07:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 11:07:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 11:07:09] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 11:07:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 11:07:09] 2.13.1.0 4026694 5453 93496 148744 2 188 20504001 40960001 12105 16776704 0 70460651 99.998 201865 60931 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 11:07:09] CVMFS is ok
[2025-07-25 11:07:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 11:07:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 11:07:09] Further information can be found at the LHC@home message board.
[2025-07-25 11:07:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 11:07:09] Checking for apptainer binary...
[2025-07-25 11:07:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 11:07:09] Running /usr/bin/apptainer --version
[2025-07-25 11:07:09] apptainer version 1.4.1-1.el9
[2025-07-25 11:07:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 11:07:09] c-208-38.aglt2.org
[2025-07-25 11:07:09] apptainer works
[2025-07-25 11:07:09] Set ATHENA_PROC_NUMBER=8
[2025-07-25 11:07:09] Set ATHENA_CORE_NUMBER=8
[2025-07-25 11:07:09] Starting ATLAS job with PandaID=6744949969
[2025-07-25 11:07:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 12:02:45]  *** The last 200 lines of the pilot log: ***
[2025-07-25 12:02:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-25 12:02:45]  is_altstaged=None
[2025-07-25 12:02:45]  is_tar=False
[2025-07-25 12:02:45]  lfn=log.45743349._015546.job.log.tgz.1
[2025-07-25 12:02:45]  mtime=0
[2025-07-25 12:02:45]  protocol_id=None
[2025-07-25 12:02:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 12:02:45]  replicas=None
[2025-07-25 12:02:45]  scope=mc23_13p6TeV
[2025-07-25 12:02:45]  status=None
[2025-07-25 12:02:45]  status_code=0
[2025-07-25 12:02:45]  storage_token=
[2025-07-25 12:02:45]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6744949969/log.45743349._015546.job.log.tgz.1
[2025-07-25 12:02:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/53/log.45743349._015546.job.log.tgz.1
[2025-07-25 12:02:45]  workdir=None
[2025-07-25 12:02:45] ]
[2025-07-25 12:02:45] 2025-07-25 16:02:06,097 | INFO     | transferring file log.45743349._015546.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6744949969/log.45743349._015546.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 12:02:45] 2025-07-25 16:02:06,098 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6744949969/log.45743349._015546.job.log.tgz.1 /tmp/boinchome/slots/8/log.45743349._015546.job
[2025-07-25 12:02:45] 2025-07-25 16:02:06,114 | INFO     | adding to output.list: log.45743349._015546.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/53/log.45743349._015546.job.log.tg
[2025-07-25 12:02:45] 2025-07-25 16:02:06,115 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 12:02:45] 2025-07-25 16:02:06,115 | INFO     | summary of transferred files:
[2025-07-25 12:02:45] 2025-07-25 16:02:06,115 | INFO     |  -- lfn=log.45743349._015546.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 12:02:45] 2025-07-25 16:02:06,115 | INFO     | stage-out finished correctly
[2025-07-25 12:02:45] 2025-07-25 16:02:07,795 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 12:02:45] 2025-07-25 16:02:09,246 | INFO     | job 6744949969 has state=finished
[2025-07-25 12:02:45] 2025-07-25 16:02:09,246 | INFO     | preparing for final server update for job 6744949969 in state='finished'
[2025-07-25 12:02:45] 2025-07-25 16:02:09,246 | INFO     | this job has now completed (state=finished)
[2025-07-25 12:02:45] 2025-07-25 16:02:09,246 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 12:02:45] 2025-07-25 16:02:09,247 | INFO     | log transfer has been attempted: DONE
[2025-07-25 12:02:45] 2025-07-25 16:02:09,247 | INFO     | job 6744949969 has finished - writing final server update
[2025-07-25 12:02:45] 2025-07-25 16:02:09,247 | INFO     | total number of processed events: 400 (read)
[2025-07-25 12:02:45] 2025-07-25 16:02:09,247 | INFO     | executing command: lscpu
[2025-07-25 12:02:45] 2025-07-25 16:02:09,305 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 12:02:45] 2025-07-25 16:02:10,364 | WARNING  | process 2723000 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 12:02:45] 2025-07-25 16:02:10,364 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6744949969/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 12:02:45] 2025-07-25 16:02:10,689 | INFO     | number of running child processes to parent process 2723000: 1
[2025-07-25 12:02:45] 2025-07-25 16:02:10,689 | INFO     | maximum number of monitored processes: 6
[2025-07-25 12:02:45] 2025-07-25 16:02:12,523 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-25 12:02:45] 2025-07-25 16:02:12,528 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3735.015312499999
[2025-07-25 12:02:45] 2025-07-25 16:02:12,541 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6744949969/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 12:02:45] 2025-07-25 16:02:12,541 | INFO     | extracted standard info from prmon json
[2025-07-25 12:02:45] 2025-07-25 16:02:12,542 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:02:45] 2025-07-25 16:02:12,542 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:02:45] 2025-07-25 16:02:12,542 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:02:45] 2025-07-25 16:02:12,542 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:02:45] 2025-07-25 16:02:12,543 | INFO     | fitting pss+swap vs Time
[2025-07-25 12:02:45] 2025-07-25 16:02:12,543 | INFO     | sum of square deviations: 32179208.0
[2025-07-25 12:02:45] 2025-07-25 16:02:12,543 | INFO     | sum of deviations: 310362570.99999994
[2025-07-25 12:02:45] 2025-07-25 16:02:12,543 | INFO     | mean x: 1753457771.0
[2025-07-25 12:02:45] 2025-07-25 16:02:12,543 | INFO     | mean y: 2510482.9574468085
[2025-07-25 12:02:45] 2025-07-25 16:02:12,543 | INFO     | -- intersect: -16909268761.189556
[2025-07-25 12:02:45] 2025-07-25 16:02:12,543 | INFO     | intersect: -16909268761.189556
[2025-07-25 12:02:45] 2025-07-25 16:02:12,543 | INFO     | chi2: 0.00031650088658601613
[2025-07-25 12:02:45] 2025-07-25 16:02:12,543 | INFO     | -- intersect: -16909268761.189556
[2025-07-25 12:02:45] 2025-07-25 16:02:12,543 | INFO     | current memory leak: 9.64 B/s (using 47 data points, chi2=0.00)
[2025-07-25 12:02:45] 2025-07-25 16:02:12,544 | INFO     | could have reported an average CPU frequency of 3759 MHz (5 samples)
[2025-07-25 12:02:45] 2025-07-25 16:02:12,544 | INFO     | ..............................
[2025-07-25 12:02:45] 2025-07-25 16:02:12,544 | INFO     | . Timing measurements:
[2025-07-25 12:02:45] 2025-07-25 16:02:12,544 | INFO     | . get job = 0 s
[2025-07-25 12:02:45] 2025-07-25 16:02:12,544 | INFO     | . initial setup = 2 s
[2025-07-25 12:02:45] 2025-07-25 16:02:12,544 | INFO     | . payload setup = 5 s
[2025-07-25 12:02:45] 2025-07-25 16:02:12,544 | INFO     | . stage-in = 0 s
[2025-07-25 12:02:45] 2025-07-25 16:02:12,544 | INFO     | . payload execution = 3262 s
[2025-07-25 12:02:45] 2025-07-25 16:02:12,544 | INFO     | . stage-out = 0 s
[2025-07-25 12:02:45] 2025-07-25 16:02:12,544 | INFO     | . log creation = 0 s
[2025-07-25 12:02:45] 2025-07-25 16:02:12,544 | INFO     | ..............................
[2025-07-25 12:02:45] 2025-07-25 16:02:12,604 | INFO     | 
[2025-07-25 12:02:45] 2025-07-25 16:02:12,604 | INFO     | job summary report
[2025-07-25 12:02:45] 2025-07-25 16:02:12,604 | INFO     | --------------------------------------------------
[2025-07-25 12:02:45] 2025-07-25 16:02:12,604 | INFO     | PanDA job id: 6744949969
[2025-07-25 12:02:45] 2025-07-25 16:02:12,604 | INFO     | task id: 45743349
[2025-07-25 12:02:45] 2025-07-25 16:02:12,604 | INFO     | errors: (none)
[2025-07-25 12:02:45] 2025-07-25 16:02:12,604 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 12:02:45] 2025-07-25 16:02:12,605 | INFO     | pilot state: finished 
[2025-07-25 12:02:45] 2025-07-25 16:02:12,605 | INFO     | transexitcode: 0
[2025-07-25 12:02:45] 2025-07-25 16:02:12,605 | INFO     | exeerrorcode: 0
[2025-07-25 12:02:45] 2025-07-25 16:02:12,605 | INFO     | exeerrordiag: 
[2025-07-25 12:02:45] 2025-07-25 16:02:12,605 | INFO     | exitcode: 0
[2025-07-25 12:02:45] 2025-07-25 16:02:12,605 | INFO     | exitmsg: OK
[2025-07-25 12:02:45] 2025-07-25 16:02:12,605 | INFO     | cpuconsumptiontime: 24495 s
[2025-07-25 12:02:45] 2025-07-25 16:02:12,605 | INFO     | nevents: 400
[2025-07-25 12:02:45] 2025-07-25 16:02:12,605 | INFO     | neventsw: 0
[2025-07-25 12:02:45] 2025-07-25 16:02:12,606 | INFO     | pid: 2723000
[2025-07-25 12:02:45] 2025-07-25 16:02:12,606 | INFO     | pgrp: 2723000
[2025-07-25 12:02:45] 2025-07-25 16:02:12,606 | INFO     | corecount: 8
[2025-07-25 12:02:45] 2025-07-25 16:02:12,606 | INFO     | event service: False
[2025-07-25 12:02:45] 2025-07-25 16:02:12,606 | INFO     | sizes: {0: 2396646, 1: 2397502, 5: 2397764, 11: 2397820, 3271: 2423372, 3272: 2423371, 3273: 2432553, 3275: 2432609, 3280: 2432835}
[2025-07-25 12:02:45] 2025-07-25 16:02:12,606 | INFO     | --------------------------------------------------
[2025-07-25 12:02:45] 2025-07-25 16:02:12,606 | INFO     | 
[2025-07-25 12:02:45] 2025-07-25 16:02:12,606 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-07-25 12:02:45] 2025-07-25 16:02:12,624 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,624 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,624 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,624 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,624 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | job 6744949969 has completed (purged errors)
[2025-07-25 12:02:45] 2025-07-25 16:02:12,625 | INFO     | overall cleanup function is called
[2025-07-25 12:02:45] 2025-07-25 16:02:13,633 | INFO     | --- collectZombieJob: --- 10, [2723000]
[2025-07-25 12:02:45] 2025-07-25 16:02:13,633 | INFO     | zombie collector waiting for pid 2723000
[2025-07-25 12:02:45] 2025-07-25 16:02:13,633 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 12:02:45] 2025-07-25 16:02:13,633 | INFO     | collected zombie processes
[2025-07-25 12:02:45] 2025-07-25 16:02:13,633 | INFO     | will attempt to kill all subprocesses of pid=2723000
[2025-07-25 12:02:45] 2025-07-25 16:02:13,970 | INFO     | process IDs to be killed: [2723000] (in reverse order)
[2025-07-25 12:02:45] 2025-07-25 16:02:14,085 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 12:02:45] 2025-07-25 16:02:14,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 12:02:45] 2025-07-25 16:02:14,100 | INFO     | did not find any defunct processes belonging to 2723000
[2025-07-25 12:02:45] 2025-07-25 16:02:14,113 | INFO     | did not find any defunct processes belonging to 2723000
[2025-07-25 12:02:45] 2025-07-25 16:02:14,113 | INFO     | ready for new job
[2025-07-25 12:02:45] 2025-07-25 16:02:14,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 12:02:45] 2025-07-25 16:02:14,114 | INFO     | ***************************************
[2025-07-25 12:02:45] 2025-07-25 16:02:14,115 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 12:02:45] 2025-07-25 16:02:14,115 | INFO     | ***************************************
[2025-07-25 12:02:45] 2025-07-25 16:02:14,115 | INFO     | 
[2025-07-25 12:02:45] 2025-07-25 16:02:14,120 | INFO     | architecture information:
[2025-07-25 12:02:45] 2025-07-25 16:02:14,120 | INFO     | executing command: cat /etc/os-release
[2025-07-25 12:02:45] 2025-07-25 16:02:14,134 | INFO     | cat /etc/os-release:
[2025-07-25 12:02:45] NAME="CentOS Linux"
[2025-07-25 12:02:45] VERSION="7 (Core)"
[2025-07-25 12:02:45] ID="centos"
[2025-07-25 12:02:45] ID_LIKE="rhel fedora"
[2025-07-25 12:02:45] VERSION_ID="7"
[2025-07-25 12:02:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 12:02:45] ANSI_COLOR="0;31"
[2025-07-25 12:02:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 12:02:45] HOME_URL="https://www.centos.org/"
[2025-07-25 12:02:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 12:02:45] 
[2025-07-25 12:02:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 12:02:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 12:02:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 12:02:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 12:02:45] 
[2025-07-25 12:02:45] 2025-07-25 16:02:14,134 | INFO     | ***************************************
[2025-07-25 12:02:45] 2025-07-25 16:02:14,637 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-07-25 12:02:45] 2025-07-25 16:02:14,653 | INFO     | sufficient remaining disk space (166159450112 B)
[2025-07-25 12:02:45] 2025-07-25 16:02:14,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 12:02:45] 2025-07-25 16:02:14,653 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 12:02:45] 2025-07-25 16:02:14,653 | INFO     | update_server=False
[2025-07-25 12:02:45] 2025-07-25 16:02:14,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 12:02:45] 2025-07-25 16:02:14,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:02:45] 2025-07-25 16:02:14,654 | INFO     | aborting loop
[2025-07-25 12:02:45] 2025-07-25 16:02:14,654 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 12:02:45] 2025-07-25 16:02:14,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 12:02:45] 2025-07-25 16:02:14,699 | INFO     | all payload control threads have been joined
[2025-07-25 12:02:45] 2025-07-25 16:02:14,941 | INFO     | all data control threads have been joined
[2025-07-25 12:02:45] 2025-07-25 16:02:15,655 | INFO     | [job] retrieve thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:15,655 | INFO     | [job] job monitor thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:15,704 | INFO     | [payload] control thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:15,858 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:15,947 | INFO     | [data] control thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:16,083 | INFO     | [job] validate thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:16,250 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:16,304 | INFO     | all job control threads have been joined
[2025-07-25 12:02:45] 2025-07-25 16:02:16,325 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:16,451 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:16,516 | INFO     | [payload] failed_post thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:16,656 | INFO     | [data] copytool_out thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:17,028 | INFO     | [payload] validate_post thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:17,078 | INFO     | [data] copytool_in thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:17,308 | INFO     | [job] control thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:17,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:02:45] 2025-07-25 16:02:18,618 | INFO     | [job] queue monitor thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:18,661 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 12:02:45] 2025-07-25 16:02:20,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081767237440)>', '<ExcThread(monitor, started 140081121699584)>']
[2025-07-25 12:02:45] 2025-07-25 16:02:25,153 | INFO     | all workflow threads have been joined
[2025-07-25 12:02:45] 2025-07-25 16:02:25,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 12:02:45] 2025-07-25 16:02:25,154 | INFO     | traces error code: 0
[2025-07-25 12:02:45] 2025-07-25 16:02:25,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 12:02:45] 2025-07-25 16:02:45,495 | INFO     | PID=2709387 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 12:02:45] 2025-07-25 16:02:45,495 | INFO     | .. there are 16 such processes running
[2025-07-25 12:02:45] 2025-07-25 16:02:45,496 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 12:02:45] 2025-07-25 16:02:45,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 12:02:45] 2025-07-25 16:02:45,496 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 12:02:45] 2025-07-25 16:02:45,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 12:02:45] 2025-07-25 16:02:45,496 | INFO     | [monitor] control thread has ended
[2025-07-25 12:02:45] 2025-07-25 16:02:45,578 [wrapper] ==== pilot stdout END ====
[2025-07-25 12:02:45] 2025-07-25 16:02:45,580 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 12:02:45] 2025-07-25 16:02:45,584 [wrapper] pilotpid: 2709387
[2025-07-25 12:02:45] 2025-07-25 16:02:45,586 [wrapper] Pilot exit status: 0
[2025-07-25 12:02:45] 2025-07-25 16:02:45,596 [wrapper] pandaids: 6744949969
[2025-07-25 12:02:45] 2025-07-25 16:02:45,678 [wrapper] cleanup supervisor_pilot 3005650 2709388
[2025-07-25 12:02:45] 2025-07-25 16:02:45,681 [wrapper] Test setup, not cleaning
[2025-07-25 12:02:45] 2025-07-25 16:02:45,683 [wrapper] apfmon messages muted
[2025-07-25 12:02:45] 2025-07-25 16:02:45,686 [wrapper] ==== wrapper stdout END ====
[2025-07-25 12:02:45] 2025-07-25 16:02:45,688 [wrapper] ==== wrapper stderr END ====
[2025-07-25 12:02:45]  *** Error codes and diagnostics ***
[2025-07-25 12:02:45]     "exeErrorCode": 0,
[2025-07-25 12:02:45]     "exeErrorDiag": "",
[2025-07-25 12:02:45]     "pilotErrorCode": 0,
[2025-07-25 12:02:45]     "pilotErrorDiag": "",
[2025-07-25 12:02:45]  *** Listing of results directory ***
[2025-07-25 12:02:45] total 354000
[2025-07-25 12:02:45] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 23:33 pilot3.tar.gz
[2025-07-25 12:02:45] -rwx------. 1 boincer umatlas     36292 Jul 24 23:45 runpilot2-wrapper.sh
[2025-07-25 12:02:45] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 23:46 queuedata.json
[2025-07-25 12:02:45] -rw-r--r--. 1 boincer umatlas       100 Jul 25 11:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 12:02:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 11:07 run_atlas
[2025-07-25 12:02:45] -rw-r--r--. 1 boincer umatlas       105 Jul 25 11:07 job.xml
[2025-07-25 12:02:45] -rw-r--r--. 2 boincer umatlas 147629147 Jul 25 11:07 EVNT.45743347._000864.pool.root.1
[2025-07-25 12:02:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 11:07 start_atlas.sh
[2025-07-25 12:02:45] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 11:07 shared
[2025-07-25 12:02:45] -rw-r--r--. 2 boincer umatlas    542890 Jul 25 11:07 input.tar.gz
[2025-07-25 12:02:45] -rw-r--r--. 1 boincer umatlas         0 Jul 25 11:07 boinc_lockfile
[2025-07-25 12:02:45] -rw-r--r--. 1 boincer umatlas      2563 Jul 25 11:07 pandaJob.out
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas    979325 Jul 25 11:07 agis_schedconf.cvmfs.json
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas   1593052 Jul 25 11:07 agis_ddmendpoints.agis.ALL.json
[2025-07-25 12:02:45] drwx------. 4 boincer umatlas      4096 Jul 25 11:07 pilot3
[2025-07-25 12:02:45] -rw-r--r--. 1 boincer umatlas      7173 Jul 25 12:00 init_data.xml
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas 209732750 Jul 25 12:01 HITS.45743349._015546.pool.root.1
[2025-07-25 12:02:45] -rw-r--r--. 1 boincer umatlas       529 Jul 25 12:01 boinc_task_state.xml
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas      1028 Jul 25 12:02 memory_monitor_summary.json
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas    289145 Jul 25 12:02 log.45743349._015546.job.log.tgz.1
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas      7764 Jul 25 12:02 heartbeat.json
[2025-07-25 12:02:45] -rw-r--r--. 1 boincer umatlas        27 Jul 25 12:02 wrapper_checkpoint.txt
[2025-07-25 12:02:45] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 12:02 boinc_mmap_file
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas       823 Jul 25 12:02 pilotlog.txt
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas        95 Jul 25 12:02 pilot_heartbeat.json
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas    340523 Jul 25 12:02 log.45743349._015546.job.log.1
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas       357 Jul 25 12:02 output.list
[2025-07-25 12:02:45] -rw-r--r--. 1 boincer umatlas       620 Jul 25 12:02 runtime_log
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas    645120 Jul 25 12:02 result.tar.gz
[2025-07-25 12:02:45] -rw-r--r--. 1 boincer umatlas      8660 Jul 25 12:02 runtime_log.err
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas       651 Jul 25 12:02 orWLDmkYOz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9cOLDmpROpLn.diag
[2025-07-25 12:02:45] -rw-r--r--. 1 boincer umatlas     21497 Jul 25 12:02 stderr.txt
[2025-07-25 12:02:45] HITS file was successfully produced:
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas 209732750 Jul 25 12:01 shared/HITS.pool.root.1
[2025-07-25 12:02:45]  *** Contents of shared directory: ***
[2025-07-25 12:02:45] total 350176
[2025-07-25 12:02:45] -rw-r--r--. 2 boincer umatlas 147629147 Jul 25 11:07 ATLAS.root_0
[2025-07-25 12:02:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 11:07 start_atlas.sh
[2025-07-25 12:02:45] -rw-r--r--. 2 boincer umatlas    542890 Jul 25 11:07 input.tar.gz
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas 209732750 Jul 25 12:01 HITS.pool.root.1
[2025-07-25 12:02:45] -rw-------. 1 boincer umatlas    645120 Jul 25 12:02 result.tar.gz
12:02:47 (2702493): run_atlas exited; CPU time 24580.166982
12:02:47 (2702493): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN