Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:26:28 (3619391): wrapper (7.7.26015): starting
11:26:28 (3619391): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 11:26:28] Arguments: --nthreads 8
[2025-07-25 11:26:28] Threads: 8
[2025-07-25 11:26:28] Checking for CVMFS
[2025-07-25 11:26:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 11:26:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 11:26:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 11:26:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 11:26:29] 2.13.1.0 116762 5692 190628 148746 1 188 34153524 40960000 12005 16776704 0 71385088 99.998 238750 35099 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 11:26:29] CVMFS is ok
[2025-07-25 11:26:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 11:26:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 11:26:29] Further information can be found at the LHC@home message board.
[2025-07-25 11:26:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 11:26:29] Checking for apptainer binary...
[2025-07-25 11:26:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 11:26:29] Running /usr/bin/apptainer --version
[2025-07-25 11:26:29] apptainer version 1.4.1-1.el9
[2025-07-25 11:26:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 11:26:29] c-208-39.aglt2.org
[2025-07-25 11:26:29] apptainer works
[2025-07-25 11:26:29] Set ATHENA_PROC_NUMBER=8
[2025-07-25 11:26:29] Set ATHENA_CORE_NUMBER=8
[2025-07-25 11:26:29] Starting ATLAS job with PandaID=6744949636
[2025-07-25 11:26:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 12:24:03]  *** The last 200 lines of the pilot log: ***
[2025-07-25 12:24:03]  replicas=None
[2025-07-25 12:24:03]  scope=mc23_13p6TeV
[2025-07-25 12:24:03]  status=None
[2025-07-25 12:24:03]  status_code=0
[2025-07-25 12:24:03]  storage_token=
[2025-07-25 12:24:03]  surl=/tmp/boinchome/slots/10/PanDA_Pilot-6744949636/log.45743349._015402.job.log.tgz.1
[2025-07-25 12:24:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/01/log.45743349._015402.job.log.tgz.1
[2025-07-25 12:24:03]  workdir=None
[2025-07-25 12:24:03] ]
[2025-07-25 12:24:03] 2025-07-25 16:23:23,635 | INFO     | transferring file log.45743349._015402.job.log.tgz.1 from /tmp/boinchome/slots/10/PanDA_Pilot-6744949636/log.45743349._015402.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-25 12:24:03] 2025-07-25 16:23:23,636 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/10/PanDA_Pilot-6744949636/log.45743349._015402.job.log.tgz.1 /tmp/boinchome/slots/10/log.45743349._015402.j
[2025-07-25 12:24:03] 2025-07-25 16:23:23,652 | INFO     | adding to output.list: log.45743349._015402.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/01/log.45743349._015402.job.log.tg
[2025-07-25 12:24:03] 2025-07-25 16:23:23,653 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 12:24:03] 2025-07-25 16:23:23,653 | INFO     | summary of transferred files:
[2025-07-25 12:24:03] 2025-07-25 16:23:23,653 | INFO     |  -- lfn=log.45743349._015402.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 12:24:03] 2025-07-25 16:23:23,653 | INFO     | stage-out finished correctly
[2025-07-25 12:24:03] 2025-07-25 16:23:24,245 | INFO     | PID=3623011 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-25 12:24:03] 2025-07-25 16:23:24,246 | INFO     | .. there are 15 such processes running
[2025-07-25 12:24:03] 2025-07-25 16:23:25,431 | INFO     | monitor loop #246: job 0:6744949636 is in state 'finished'
[2025-07-25 12:24:03] 2025-07-25 16:23:25,432 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 12:24:03] 2025-07-25 16:23:26,670 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 12:24:03] 2025-07-25 16:23:27,161 | INFO     | job 6744949636 has state=finished
[2025-07-25 12:24:03] 2025-07-25 16:23:27,162 | INFO     | preparing for final server update for job 6744949636 in state='finished'
[2025-07-25 12:24:03] 2025-07-25 16:23:27,162 | INFO     | this job has now completed (state=finished)
[2025-07-25 12:24:03] 2025-07-25 16:23:27,162 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 12:24:03] 2025-07-25 16:23:27,162 | INFO     | log transfer has been attempted: DONE
[2025-07-25 12:24:03] 2025-07-25 16:23:27,162 | INFO     | job 6744949636 has finished - writing final server update
[2025-07-25 12:24:03] 2025-07-25 16:23:27,163 | INFO     | total number of processed events: 400 (read)
[2025-07-25 12:24:03] 2025-07-25 16:23:27,163 | INFO     | executing command: lscpu
[2025-07-25 12:24:03] 2025-07-25 16:23:27,219 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 12:24:03] 2025-07-25 16:23:27,935 | INFO     | monitor loop #247: job 0:6744949636 is in state 'finished'
[2025-07-25 12:24:03] 2025-07-25 16:23:27,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 12:24:03] 2025-07-25 16:23:30,437 | INFO     | monitor loop #248: job 0:6744949636 is in state 'finished'
[2025-07-25 12:24:03] 2025-07-25 16:23:30,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 12:24:03] 2025-07-25 16:23:30,468 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-25 12:24:03] 2025-07-25 16:23:30,473 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3726.7726093750016
[2025-07-25 12:24:03] 2025-07-25 16:23:30,486 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6744949636/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 12:24:03] 2025-07-25 16:23:30,487 | INFO     | extracted standard info from prmon json
[2025-07-25 12:24:03] 2025-07-25 16:23:30,487 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:24:03] 2025-07-25 16:23:30,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:24:03] 2025-07-25 16:23:30,488 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:24:03] 2025-07-25 16:23:30,488 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:24:03] 2025-07-25 16:23:30,489 | INFO     | fitting pss+swap vs Time
[2025-07-25 12:24:03] 2025-07-25 16:23:30,489 | INFO     | sum of square deviations: 36465800.0
[2025-07-25 12:24:03] 2025-07-25 16:23:30,489 | INFO     | sum of deviations: 173756181.99999997
[2025-07-25 12:24:03] 2025-07-25 16:23:30,489 | INFO     | mean x: 1753458990.0
[2025-07-25 12:24:03] 2025-07-25 16:23:30,489 | INFO     | mean y: 2543272.5306122447
[2025-07-25 12:24:03] 2025-07-25 16:23:30,489 | INFO     | -- intersect: -8352527489.552658
[2025-07-25 12:24:03] 2025-07-25 16:23:30,489 | INFO     | intersect: -8352527489.552658
[2025-07-25 12:24:03] 2025-07-25 16:23:30,489 | INFO     | chi2: 0.0006848608061739542
[2025-07-25 12:24:03] 2025-07-25 16:23:30,489 | INFO     | -- intersect: -8352527489.552658
[2025-07-25 12:24:03] 2025-07-25 16:23:30,489 | INFO     | current memory leak: 4.76 B/s (using 49 data points, chi2=0.00)
[2025-07-25 12:24:03] 2025-07-25 16:23:30,489 | INFO     | could have reported an average CPU frequency of 3710 MHz (5 samples)
[2025-07-25 12:24:03] 2025-07-25 16:23:30,490 | INFO     | ..............................
[2025-07-25 12:24:03] 2025-07-25 16:23:30,490 | INFO     | . Timing measurements:
[2025-07-25 12:24:03] 2025-07-25 16:23:30,490 | INFO     | . get job = 0 s
[2025-07-25 12:24:03] 2025-07-25 16:23:30,490 | INFO     | . initial setup = 2 s
[2025-07-25 12:24:03] 2025-07-25 16:23:30,490 | INFO     | . payload setup = 5 s
[2025-07-25 12:24:03] 2025-07-25 16:23:30,490 | INFO     | . stage-in = 0 s
[2025-07-25 12:24:03] 2025-07-25 16:23:30,490 | INFO     | . payload execution = 3382 s
[2025-07-25 12:24:03] 2025-07-25 16:23:30,490 | INFO     | . stage-out = 0 s
[2025-07-25 12:24:03] 2025-07-25 16:23:30,490 | INFO     | . log creation = 0 s
[2025-07-25 12:24:03] 2025-07-25 16:23:30,490 | INFO     | ..............................
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | 
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | job summary report
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | --------------------------------------------------
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | PanDA job id: 6744949636
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | task id: 45743349
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | errors: (none)
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | pilot state: finished 
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | transexitcode: 0
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | exeerrorcode: 0
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | exeerrordiag: 
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | exitcode: 0
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | exitmsg: OK
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | cpuconsumptiontime: 25329 s
[2025-07-25 12:24:03] 2025-07-25 16:23:30,544 | INFO     | nevents: 400
[2025-07-25 12:24:03] 2025-07-25 16:23:30,545 | INFO     | neventsw: 0
[2025-07-25 12:24:03] 2025-07-25 16:23:30,545 | INFO     | pid: 3629669
[2025-07-25 12:24:03] 2025-07-25 16:23:30,545 | INFO     | pgrp: 3629669
[2025-07-25 12:24:03] 2025-07-25 16:23:30,545 | INFO     | corecount: 8
[2025-07-25 12:24:03] 2025-07-25 16:23:30,545 | INFO     | event service: False
[2025-07-25 12:24:03] 2025-07-25 16:23:30,545 | INFO     | sizes: {0: 2397474, 4: 2397736, 11: 2397764, 3391: 2423500, 3392: 2432500, 3395: 2432556, 3399: 2432910}
[2025-07-25 12:24:03] 2025-07-25 16:23:30,545 | INFO     | --------------------------------------------------
[2025-07-25 12:24:03] 2025-07-25 16:23:30,545 | INFO     | 
[2025-07-25 12:24:03] 2025-07-25 16:23:30,545 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-07-25 12:24:03] 2025-07-25 16:23:30,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,565 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 12:24:03] 2025-07-25 16:23:30,566 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,566 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 12:24:03] 2025-07-25 16:23:30,566 | INFO     | job 6744949636 has completed (purged errors)
[2025-07-25 12:24:03] 2025-07-25 16:23:30,566 | INFO     | overall cleanup function is called
[2025-07-25 12:24:03] 2025-07-25 16:23:31,573 | INFO     | --- collectZombieJob: --- 10, [3629669]
[2025-07-25 12:24:03] 2025-07-25 16:23:31,573 | INFO     | zombie collector waiting for pid 3629669
[2025-07-25 12:24:03] 2025-07-25 16:23:31,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 12:24:03] 2025-07-25 16:23:31,574 | INFO     | collected zombie processes
[2025-07-25 12:24:03] 2025-07-25 16:23:31,574 | INFO     | will attempt to kill all subprocesses of pid=3629669
[2025-07-25 12:24:03] 2025-07-25 16:23:31,926 | INFO     | process IDs to be killed: [3629669] (in reverse order)
[2025-07-25 12:24:03] 2025-07-25 16:23:32,038 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 12:24:03] 2025-07-25 16:23:32,039 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 12:24:03] 2025-07-25 16:23:32,053 | INFO     | did not find any defunct processes belonging to 3629669
[2025-07-25 12:24:03] 2025-07-25 16:23:32,064 | INFO     | did not find any defunct processes belonging to 3629669
[2025-07-25 12:24:03] 2025-07-25 16:23:32,065 | INFO     | ready for new job
[2025-07-25 12:24:03] 2025-07-25 16:23:32,065 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 12:24:03] 2025-07-25 16:23:32,066 | INFO     | ***************************************
[2025-07-25 12:24:03] 2025-07-25 16:23:32,066 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 12:24:03] 2025-07-25 16:23:32,066 | INFO     | ***************************************
[2025-07-25 12:24:03] 2025-07-25 16:23:32,066 | INFO     | 
[2025-07-25 12:24:03] 2025-07-25 16:23:32,071 | INFO     | architecture information:
[2025-07-25 12:24:03] 2025-07-25 16:23:32,071 | INFO     | executing command: cat /etc/os-release
[2025-07-25 12:24:03] 2025-07-25 16:23:32,088 | INFO     | cat /etc/os-release:
[2025-07-25 12:24:03] NAME="CentOS Linux"
[2025-07-25 12:24:03] VERSION="7 (Core)"
[2025-07-25 12:24:03] ID="centos"
[2025-07-25 12:24:03] ID_LIKE="rhel fedora"
[2025-07-25 12:24:03] VERSION_ID="7"
[2025-07-25 12:24:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 12:24:03] ANSI_COLOR="0;31"
[2025-07-25 12:24:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 12:24:03] HOME_URL="https://www.centos.org/"
[2025-07-25 12:24:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 12:24:03] 
[2025-07-25 12:24:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 12:24:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 12:24:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 12:24:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 12:24:03] 
[2025-07-25 12:24:03] 2025-07-25 16:23:32,088 | INFO     | ***************************************
[2025-07-25 12:24:03] 2025-07-25 16:23:32,590 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-07-25 12:24:03] 2025-07-25 16:23:32,606 | INFO     | sufficient remaining disk space (166168887296 B)
[2025-07-25 12:24:03] 2025-07-25 16:23:32,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 12:24:03] 2025-07-25 16:23:32,606 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 12:24:03] 2025-07-25 16:23:32,606 | INFO     | update_server=False
[2025-07-25 12:24:03] 2025-07-25 16:23:32,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 12:24:03] 2025-07-25 16:23:32,607 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 12:24:03] 2025-07-25 16:23:32,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 12:24:03] 2025-07-25 16:23:32,940 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-25 12:24:03] 2025-07-25 16:23:32,941 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-25 12:24:03] 2025-07-25 16:23:32,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:24:03] 2025-07-25 16:23:32,941 | INFO     | will abort loop
[2025-07-25 12:24:03] 2025-07-25 16:23:33,316 | INFO     | all data control threads have been joined
[2025-07-25 12:24:03] 2025-07-25 16:23:33,417 | INFO     | all payload control threads have been joined
[2025-07-25 12:24:03] 2025-07-25 16:23:33,612 | INFO     | [job] retrieve thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:33,758 | INFO     | [payload] validate_post thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:33,815 | INFO     | [job] validate thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:33,945 | INFO     | [job] job monitor thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:34,130 | INFO     | all job control threads have been joined
[2025-07-25 12:24:03] 2025-07-25 16:23:34,170 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:34,189 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:34,321 | INFO     | [data] control thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:34,423 | INFO     | [payload] control thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:34,585 | INFO     | [payload] failed_post thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:34,594 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:34,609 | INFO     | [data] copytool_out thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:34,660 | INFO     | [data] copytool_in thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:35,136 | INFO     | [job] control thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:35,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:24:03] 2025-07-25 16:23:36,560 | INFO     | [job] queue monitor thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:36,739 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:42,791 | INFO     | job.realtimelogging is not enabled
[2025-07-25 12:24:03] 2025-07-25 16:23:43,797 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 12:24:03] 2025-07-25 16:23:45,339 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140706915751744)>', '<ExcThread(monitor, started 140706643416832)>']
[2025-07-25 12:24:03] 2025-07-25 16:23:50,364 | INFO     | all workflow threads have been joined
[2025-07-25 12:24:03] 2025-07-25 16:23:50,365 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 12:24:03] 2025-07-25 16:23:50,365 | INFO     | traces error code: 0
[2025-07-25 12:24:03] 2025-07-25 16:23:50,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 12:24:03] 2025-07-25 16:24:02,766 | INFO     | PID=3623011 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 12:24:03] 2025-07-25 16:24:02,766 | INFO     | .. there are 16 such processes running
[2025-07-25 12:24:03] 2025-07-25 16:24:02,767 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 12:24:03] 2025-07-25 16:24:02,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 12:24:03] 2025-07-25 16:24:02,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 12:24:03] 2025-07-25 16:24:02,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 12:24:03] 2025-07-25 16:24:02,767 | INFO     | [monitor] control thread has ended
[2025-07-25 12:24:03] 2025-07-25 16:24:02,871 [wrapper] ==== pilot stdout END ====
[2025-07-25 12:24:03] 2025-07-25 16:24:02,873 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 12:24:03] 2025-07-25 16:24:02,875 [wrapper] pilotpid: 3623011
[2025-07-25 12:24:03] 2025-07-25 16:24:02,878 [wrapper] Pilot exit status: 0
[2025-07-25 12:24:03] 2025-07-25 16:24:02,887 [wrapper] pandaids: 6744949636
[2025-07-25 12:24:03] 2025-07-25 16:24:02,973 [wrapper] cleanup supervisor_pilot 3879729 3623012
[2025-07-25 12:24:03] 2025-07-25 16:24:02,976 [wrapper] Test setup, not cleaning
[2025-07-25 12:24:03] 2025-07-25 16:24:02,978 [wrapper] apfmon messages muted
[2025-07-25 12:24:03] 2025-07-25 16:24:02,980 [wrapper] ==== wrapper stdout END ====
[2025-07-25 12:24:03] 2025-07-25 16:24:02,982 [wrapper] ==== wrapper stderr END ====
[2025-07-25 12:24:03]  *** Error codes and diagnostics ***
[2025-07-25 12:24:03]     "exeErrorCode": 0,
[2025-07-25 12:24:03]     "exeErrorDiag": "",
[2025-07-25 12:24:03]     "pilotErrorCode": 0,
[2025-07-25 12:24:03]     "pilotErrorDiag": "",
[2025-07-25 12:24:03]  *** Listing of results directory ***
[2025-07-25 12:24:03] total 436396
[2025-07-25 12:24:03] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 23:17 pilot3.tar.gz
[2025-07-25 12:24:03] -rwx------. 1 boincer umatlas     36292 Jul 24 23:32 runpilot2-wrapper.sh
[2025-07-25 12:24:03] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 23:32 queuedata.json
[2025-07-25 12:24:03] -rw-r--r--. 1 boincer umatlas       100 Jul 25 11:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 12:24:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 11:26 run_atlas
[2025-07-25 12:24:03] -rw-r--r--. 1 boincer umatlas       105 Jul 25 11:26 job.xml
[2025-07-25 12:24:03] -rw-r--r--. 2 boincer umatlas 231498762 Jul 25 11:26 EVNT.45743347._000855.pool.root.1
[2025-07-25 12:24:03] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 11:26 start_atlas.sh
[2025-07-25 12:24:03] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 11:26 shared
[2025-07-25 12:24:03] -rw-r--r--. 2 boincer umatlas    542894 Jul 25 11:26 input.tar.gz
[2025-07-25 12:24:03] -rw-r--r--. 1 boincer umatlas         0 Jul 25 11:26 boinc_lockfile
[2025-07-25 12:24:03] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 11:26 pandaJob.out
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas    979317 Jul 25 11:26 agis_schedconf.cvmfs.json
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas   1593052 Jul 25 11:26 agis_ddmendpoints.agis.ALL.json
[2025-07-25 12:24:03] drwx------. 4 boincer umatlas      4096 Jul 25 11:26 pilot3
[2025-07-25 12:24:03] -rw-r--r--. 1 boincer umatlas      7175 Jul 25 12:19 init_data.xml
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas 210204273 Jul 25 12:23 HITS.45743349._015402.pool.root.1
[2025-07-25 12:24:03] -rw-r--r--. 1 boincer umatlas       529 Jul 25 12:23 boinc_task_state.xml
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas      1026 Jul 25 12:23 memory_monitor_summary.json
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas    292984 Jul 25 12:23 log.45743349._015402.job.log.tgz.1
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas      7768 Jul 25 12:23 heartbeat.json
[2025-07-25 12:24:03] -rw-r--r--. 1 boincer umatlas        27 Jul 25 12:23 wrapper_checkpoint.txt
[2025-07-25 12:24:03] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 12:23 boinc_mmap_file
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas        95 Jul 25 12:24 pilot_heartbeat.json
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas       823 Jul 25 12:24 pilotlog.txt
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas    348547 Jul 25 12:24 log.45743349._015402.job.log.1
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas       357 Jul 25 12:24 output.list
[2025-07-25 12:24:03] -rw-r--r--. 1 boincer umatlas       620 Jul 25 12:24 runtime_log
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas    665600 Jul 25 12:24 result.tar.gz
[2025-07-25 12:24:03] -rw-r--r--. 1 boincer umatlas      8674 Jul 25 12:24 runtime_log.err
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas       651 Jul 25 12:24 co1KDmjLOz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoaOLDmpWu3Bn.diag
[2025-07-25 12:24:03] -rw-r--r--. 1 boincer umatlas     21931 Jul 25 12:24 stderr.txt
[2025-07-25 12:24:03] HITS file was successfully produced:
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas 210204273 Jul 25 12:23 shared/HITS.pool.root.1
[2025-07-25 12:24:03]  *** Contents of shared directory: ***
[2025-07-25 12:24:03] total 432560
[2025-07-25 12:24:03] -rw-r--r--. 2 boincer umatlas 231498762 Jul 25 11:26 ATLAS.root_0
[2025-07-25 12:24:03] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 11:26 start_atlas.sh
[2025-07-25 12:24:03] -rw-r--r--. 2 boincer umatlas    542894 Jul 25 11:26 input.tar.gz
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas 210204273 Jul 25 12:23 HITS.pool.root.1
[2025-07-25 12:24:03] -rw-------. 1 boincer umatlas    665600 Jul 25 12:24 result.tar.gz
12:24:04 (3619391): run_atlas exited; CPU time 25409.253778
12:24:04 (3619391): called boinc_finish(0)

</stderr_txt>
]]>

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