Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-25 16:32:07 (33396): Detected: vboxwrapper 26206
2025-07-25 16:32:07 (33396): Detected: BOINC client v8.2.4
2025-07-25 16:32:08 (33396): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-07-25 16:32:08 (33396): Successfully copied 'init_data.xml' to the shared directory.
2025-07-25 16:32:08 (33396): Create VM. (boinc_6004d0d0261821d3, slot#5)
2025-07-25 16:32:08 (33396): Setting Memory Size for VM. (4100MB)
2025-07-25 16:32:08 (33396): Setting CPU Count for VM. (1)
2025-07-25 16:32:08 (33396): Setting Chipset Options for VM.
2025-07-25 16:32:08 (33396): Setting Graphics Controller Options for VM.
2025-07-25 16:32:08 (33396): Setting Boot Options for VM.
2025-07-25 16:32:08 (33396): Setting Network Configuration for NAT.
2025-07-25 16:32:08 (33396): Enabling VM Network Access.
2025-07-25 16:32:08 (33396): Disabling USB Support for VM.
2025-07-25 16:32:08 (33396): Disabling COM Port Support for VM.
2025-07-25 16:32:08 (33396): Disabling LPT Port Support for VM.
2025-07-25 16:32:08 (33396): Disabling Audio Support for VM.
2025-07-25 16:32:09 (33396): Disabling Clipboard Support for VM.
2025-07-25 16:32:09 (33396): Disabling Drag and Drop Support for VM.
2025-07-25 16:32:09 (33396): Adding storage controller(s) to VM.
2025-07-25 16:32:09 (33396): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-25 16:32:10 (33396): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-25 16:32:10 (33396): forwarding host port 36059 to guest port 80
2025-07-25 16:32:10 (33396): Enabling remote desktop for VM.
2025-07-25 16:32:10 (33396): Required extension pack not installed, remote desktop not enabled.
2025-07-25 16:32:10 (33396): Enabling shared directory for VM.
2025-07-25 16:32:10 (33396): Starting VM using VBoxManage interface. (boinc_6004d0d0261821d3, slot#5)
2025-07-25 16:32:11 (33396): Successfully started VM. (PID = '33863')
2025-07-25 16:32:11 (33396): Reporting VM Process ID to BOINC.
2025-07-25 16:32:11 (33396): Guest Log: BIOS: VirtualBox 7.0.16
2025-07-25 16:32:11 (33396): Guest Log: CPUID EDX: 0x178bfbff
2025-07-25 16:32:11 (33396): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-25 16:32:11 (33396): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-25 16:32:11 (33396): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-25 16:32:11 (33396): Detected: Web Application Enabled (http://localhost:36059)
2025-07-25 16:32:11 (33396): Preference change detected
2025-07-25 16:32:11 (33396): Setting CPU throttle for VM. (100%)
2025-07-25 16:32:12 (33396): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-25 16:32:13 (33396): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-25 16:32:13 (33396): Guest Log: BIOS: Booting from Hard Disk...
2025-07-25 16:32:16 (33396): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-25 16:32:16 (33396): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-25 16:32:16 (33396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-25 16:32:20 (33396): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-25 16:32:20 (33396): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-25 16:32:33 (33396): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-25 16:32:33 (33396): Guest Log: 00:00:00.000236 main     Log opened 2025-07-25T15:32:31.671256000Z
2025-07-25 16:32:33 (33396): Guest Log: 00:00:00.000451 main     OS Product: Linux
2025-07-25 16:32:33 (33396): Guest Log: 00:00:00.000493 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-25 16:32:33 (33396): Guest Log: 00:00:00.000513 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-25 16:32:33 (33396): Guest Log: 00:00:00.000529 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-25 16:32:33 (33396): Guest Log: 00:00:00.000529 main     Process ID: 1237
2025-07-25 16:32:33 (33396): Guest Log: 00:00:00.000530 main     Package type: LINUX_64BITS_GENERIC
2025-07-25 16:32:33 (33396): Guest Log: 00:00:00.002103 main     5.2.32 r132073 started. Verbose level = 0
2025-07-25 16:32:33 (33396): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-25 16:32:33 (33396): Guest Log: [INFO] Mounting shared directory
2025-07-25 16:32:34 (33396): Guest Log: [INFO] Checking for init_data.xml
2025-07-25 16:32:42 (33396): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-25 16:32:42 (33396): Guest Log: [INFO] Detected branch: prod
2025-07-25 16:32:42 (33396): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-25 16:32:42 (33396): Guest Log: Copying input files
2025-07-25 16:32:43 (33396): Guest Log: Copied input files into RunAtlas.
2025-07-25 16:32:43 (33396): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-25 16:32:43 (33396): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-25 16:32:43 (33396): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-25 16:32:43 (33396): Guest Log: Further information can be found at the LHC@home message board.
2025-07-25 16:32:58 (33396): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-25 16:32:58 (33396): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-25 16:32:58 (33396): Guest Log: 2.6.3.0 1508 0 30060 148746 3 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-25 16:33:30 (33396): Guest Log: copied the webapp to /var/www
2025-07-25 16:33:30 (33396): Guest Log: core_number=1
2025-07-25 16:33:30 (33396): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-25 16:33:30 (33396): Guest Log:  *** Starting ATLAS job. (PandaID=6744978112 taskID=45743349) ***
2025-07-25 18:11:12 (33396): Status Report: Elapsed Time: '6000.000000'
2025-07-25 18:11:12 (33396): Status Report: CPU Time: '5657.510000'
2025-07-25 19:50:14 (33396): Status Report: Elapsed Time: '12000.000000'
2025-07-25 19:50:14 (33396): Status Report: CPU Time: '11600.190000'
2025-07-25 21:29:14 (33396): Status Report: Elapsed Time: '18000.000000'
2025-07-25 21:29:14 (33396): Status Report: CPU Time: '17542.350000'
2025-07-25 23:08:15 (33396): Status Report: Elapsed Time: '24000.000000'
2025-07-25 23:08:15 (33396): Status Report: CPU Time: '23485.030000'
2025-07-25 23:45:57 (33396): Guest Log:  *** Job finished ***
2025-07-25 23:45:57 (33396): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:36,817 | INFO     | all workflow threads have been joined
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:36,817 | INFO     | end of generic workflow (traces error code: 0)
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:36,817 | INFO     | traces error code: 0
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:36,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,459 | INFO     | PID=5786 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,460 | INFO     | found 0 job(s) in 20 queues
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,460 | INFO     | [monitor] control thread has ended
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,594 [wrapper] ==== pilot stdout END ====
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,598 [wrapper] ==== wrapper stdout RESUME ====
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,602 [wrapper] pilotpid: 5786
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,607 [wrapper] Pilot exit status: 0
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,731 [wrapper] pandaids: 6744978112
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,753 [wrapper] cleanup supervisor_pilot   915 5787
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,758 [wrapper] Test setup, not cleaning
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,762 [wrapper] apfmon messages muted
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,767 [wrapper] ==== wrapper stdout END ====
2025-07-25 23:45:57 (33396): Guest Log: 2025-07-25 22:45:56,772 [wrapper] ==== wrapper stderr END ====
2025-07-25 23:45:57 (33396): Guest Log:  *** Error codes and diagnostics ***
2025-07-25 23:45:57 (33396): Guest Log:     "exeErrorCode": 0,
2025-07-25 23:45:57 (33396): Guest Log:     "exeErrorDiag": "",
2025-07-25 23:45:57 (33396): Guest Log:     "pilotErrorCode": 0,
2025-07-25 23:45:57 (33396): Guest Log:     "pilotErrorDiag": "",
2025-07-25 23:45:57 (33396): Guest Log:  *** Listing of results directory ***
2025-07-25 23:45:57 (33396): Guest Log: total 205192
2025-07-25 23:45:57 (33396): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 25 08:34 pilot3.tar.gz
2025-07-25 23:45:57 (33396): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 25 08:40 queuedata.json
2025-07-25 23:45:57 (33396): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 25 08:41 runpilot2-wrapper.sh
2025-07-25 23:45:57 (33396): Guest Log: -rw-r--r--. 1 atlas atlas     15095 Jul 25 15:32 start_atlas.sh
2025-07-25 23:45:57 (33396): Guest Log: -rw-r--r--. 1 atlas atlas      9177 Jul 25 15:32 init_data.xml
2025-07-25 23:45:57 (33396): Guest Log: -rw-r--r--. 1 atlas atlas    542891 Jul 25 15:32 input.tar.gz
2025-07-25 23:45:57 (33396): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 25 15:32 EVNT.45743347._000967.pool.root.1 -> /data/./ATLAS.root_0
2025-07-25 23:45:57 (33396): Guest Log: -rw-r--r--. 1 atlas atlas      2562 Jul 25 15:33 pandaJob.out
2025-07-25 23:45:57 (33396): Guest Log: -rw-------. 1 atlas atlas    979317 Jul 25 15:34 agis_schedconf.cvmfs.json
2025-07-25 23:45:57 (33396): Guest Log: drwx------. 4 atlas atlas      4096 Jul 25 15:34 pilot3
2025-07-25 23:45:57 (33396): Guest Log: -rw-------. 1 atlas atlas 200980713 Jul 25 22:44 HITS.45743349._018615.pool.root.1
2025-07-25 23:45:57 (33396): Guest Log: -rw-------. 1 atlas atlas      1026 Jul 25 22:45 memory_monitor_summary.json
2025-07-25 23:45:57 (33396): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 25 22:45 agis_ddmendpoints.agis.ALL.json
2025-07-25 23:45:57 (33396): Guest Log: -rw-------. 1 atlas atlas    400495 Jul 25 22:45 log.45743349._018615.job.log.tgz.1
2025-07-25 23:45:57 (33396): Guest Log: -rw-------. 1 atlas atlas      7819 Jul 25 22:45 heartbeat.json
2025-07-25 23:45:57 (33396): Guest Log: -rw-------. 1 atlas atlas       744 Jul 25 22:45 pilotlog.txt
2025-07-25 23:45:57 (33396): Guest Log: -rw-------. 1 atlas atlas        95 Jul 25 22:45 pilot_heartbeat.json
2025-07-25 23:45:57 (33396): Guest Log: -rw-------. 1 atlas atlas   2265576 Jul 25 22:45 log.45743349._018615.job.log.1
2025-07-25 23:45:57 (33396): Guest Log: -rw-------. 1 atlas atlas       357 Jul 25 22:45 output.list
2025-07-25 23:45:57 (33396): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 25 22:45 runtime_log
2025-07-25 23:45:57 (33396): Guest Log: -rw-------. 1 atlas atlas   2682880 Jul 25 22:45 result.tar.gz
2025-07-25 23:45:57 (33396): Guest Log: -rw-------. 1 atlas atlas       660 Jul 25 22:45 wn8MDmQATz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmM6OLDmV6xqUo.diag
2025-07-25 23:45:57 (33396): Guest Log: -rw-r--r--. 1 atlas atlas      8485 Jul 25 22:45 runtime_log.err
2025-07-25 23:45:57 (33396): Guest Log: Looking for outputfile HITS.45743349._018615.pool.root.1
2025-07-25 23:45:57 (33396): Guest Log: HITS file was successfully produced
2025-07-25 23:45:57 (33396): Guest Log: -rw-------. 1 atlas atlas 200980713 Jul 25 22:44 /home/atlas/RunAtlas/HITS.45743349._018615.pool.root.1
2025-07-25 23:45:57 (33396): Guest Log: Successfully finished the ATLAS job!
2025-07-25 23:45:57 (33396): Guest Log: Copying the results back to the shared directory!
2025-07-25 23:45:58 (33396): Guest Log:  *** Contents of shared directory: ***
2025-07-25 23:45:58 (33396): Guest Log: total 227516
2025-07-25 23:45:58 (33396): Guest Log: -rw-r--r--. 1 root root 229711881 Jul 25 15:32 ATLAS.root_0
2025-07-25 23:45:58 (33396): Guest Log: -rw-r--r--. 1 root root      9177 Jul 25 15:32 init_data.xml
2025-07-25 23:45:58 (33396): Guest Log: -rw-r--r--. 1 root root    542891 Jul 25 15:32 input.tar.gz
2025-07-25 23:45:58 (33396): Guest Log: -rw-r--r--. 1 root root   2682880 Jul 25 22:45 result.tar.gz
2025-07-25 23:45:58 (33396): Guest Log: -rw-r--r--. 1 root root     15095 Jul 25 15:32 start_atlas.sh
2025-07-25 23:45:58 (33396): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-25 23:45:58 (33396): VM Completion File Detected.
2025-07-25 23:45:58 (33396): Powering off VM.
2025-07-25 23:45:58 (33396): Successfully stopped VM.
2025-07-25 23:45:58 (33396): Deregistering VM. (boinc_6004d0d0261821d3, slot#5)
2025-07-25 23:45:58 (33396): Removing network bandwidth throttle group from VM.
2025-07-25 23:45:58 (33396): Removing VM from VirtualBox.
23:46:03 (33396): called boinc_finish(0)

</stderr_txt>
]]>

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