Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:45:00 (3231022): wrapper (7.7.26015): starting
10:45:00 (3231022): wrapper: running run_atlas (--nthreads 10)
[2025-07-25 10:45:00] Arguments: --nthreads 10
[2025-07-25 10:45:00] Threads: 10
[2025-07-25 10:45:00] Checking for CVMFS
[2025-07-25 10:45:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 10:45:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 10:45:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 10:45:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 10:45:02] 2.13.1.0 128745 2352 136000 148744 3 379 14670579 39288833 8329 16776704 0 2222769 99.447 5589310 46184 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 10:45:02] CVMFS is ok
[2025-07-25 10:45:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 10:45:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 10:45:02] Further information can be found at the LHC@home message board.
[2025-07-25 10:45:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 10:45:02] Checking for apptainer binary...
[2025-07-25 10:45:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 10:45:02] Running /usr/bin/apptainer --version
[2025-07-25 10:45:03] apptainer version 1.4.1-1.el9
[2025-07-25 10:45:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 10:45:03] c-211-4.aglt2.org
[2025-07-25 10:45:03] apptainer works
[2025-07-25 10:45:03] Set ATHENA_PROC_NUMBER=10
[2025-07-25 10:45:03] Set ATHENA_CORE_NUMBER=10
[2025-07-25 10:45:03] Starting ATLAS job with PandaID=6744975982
[2025-07-25 10:45:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 17:02:43]  *** The last 200 lines of the pilot log: ***
[2025-07-25 17:02:43] 2025-07-25 21:02:08,046 | INFO     | monitor loop #1377: job 0:6744975982 is in state 'finished'
[2025-07-25 17:02:43] 2025-07-25 21:02:08,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 17:02:43] 2025-07-25 21:02:09,349 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 17:02:43] 2025-07-25 21:02:09,357 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.7490749999997
[2025-07-25 17:02:43] 2025-07-25 21:02:09,364 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744975982/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 17:02:43] 2025-07-25 21:02:09,365 | INFO     | extracted standard info from prmon json
[2025-07-25 17:02:43] 2025-07-25 21:02:09,365 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 17:02:43] 2025-07-25 21:02:09,365 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 17:02:43] 2025-07-25 21:02:09,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 17:02:43] 2025-07-25 21:02:09,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 17:02:43] 2025-07-25 21:02:09,375 | INFO     | fitting pss+swap vs Time
[2025-07-25 17:02:43] 2025-07-25 21:02:09,376 | INFO     | sum of square deviations: 15579086780.67207
[2025-07-25 17:02:43] 2025-07-25 21:02:09,380 | INFO     | sum of deviations: 4812301550.5989065
[2025-07-25 17:02:43] 2025-07-25 21:02:09,380 | INFO     | mean x: 1753466046.0298102
[2025-07-25 17:02:43] 2025-07-25 21:02:09,380 | INFO     | mean y: 2652495.127371274
[2025-07-25 17:02:43] 2025-07-25 21:02:09,380 | INFO     | -- intersect: -538984347.3286647
[2025-07-25 17:02:43] 2025-07-25 21:02:09,381 | INFO     | intersect: -538984347.3286647
[2025-07-25 17:02:43] 2025-07-25 21:02:09,381 | INFO     | chi2: 1.9393595852266055
[2025-07-25 17:02:43] 2025-07-25 21:02:09,382 | INFO     | sum of square deviations: 14954405906.381857
[2025-07-25 17:02:43] 2025-07-25 21:02:09,386 | INFO     | sum of deviations: 3227476644.7115254
[2025-07-25 17:02:43] 2025-07-25 21:02:09,387 | INFO     | mean x: 1753465893.5412087
[2025-07-25 17:02:43] 2025-07-25 21:02:09,387 | INFO     | mean y: 2652111.519230769
[2025-07-25 17:02:43] 2025-07-25 21:02:09,387 | INFO     | -- intersect: -375782863.03815764
[2025-07-25 17:02:43] 2025-07-25 21:02:09,387 | INFO     | intersect: -375782863.03815764
[2025-07-25 17:02:43] 2025-07-25 21:02:09,388 | INFO     | chi2: 1.9365544343631633
[2025-07-25 17:02:43] 2025-07-25 21:02:09,388 | INFO     | current chi2=1.9365544343631633 (change=0.14464315358589677 %)
[2025-07-25 17:02:43] 2025-07-25 21:02:09,388 | INFO     | right removable region: 363
[2025-07-25 17:02:43] 2025-07-25 21:02:09,389 | INFO     | sum of square deviations: 14954196370.296698
[2025-07-25 17:02:43] 2025-07-25 21:02:09,393 | INFO     | sum of deviations: -61914263556.74729
[2025-07-25 17:02:43] 2025-07-25 21:02:09,394 | INFO     | mean x: 1753466198.543956
[2025-07-25 17:02:43] 2025-07-25 21:02:09,394 | INFO     | mean y: 2668692.7967032967
[2025-07-25 17:02:43] 2025-07-25 21:02:09,394 | INFO     | -- intersect: 7262474948.259451
[2025-07-25 17:02:43] 2025-07-25 21:02:09,394 | INFO     | intersect: 7262474948.259451
[2025-07-25 17:02:43] 2025-07-25 21:02:09,395 | INFO     | chi2: 0.3343936571230951
[2025-07-25 17:02:43] 2025-07-25 21:02:09,395 | INFO     | current chi2=0.3343936571230951 (change=82.75752162361255 %)
[2025-07-25 17:02:43] 2025-07-25 21:02:09,395 | INFO     | sum of square deviations: 14346346921.28689
[2025-07-25 17:02:43] 2025-07-25 21:02:09,400 | INFO     | sum of deviations: -57767196637.52919
[2025-07-25 17:02:43] 2025-07-25 21:02:09,400 | INFO     | mean x: 1753466351.0445683
[2025-07-25 17:02:43] 2025-07-25 21:02:09,400 | INFO     | mean y: 2667635.9080779944
[2025-07-25 17:02:43] 2025-07-25 21:02:09,400 | INFO     | -- intersect: 7063199216.096313
[2025-07-25 17:02:43] 2025-07-25 21:02:09,400 | INFO     | intersect: 7063199216.096313
[2025-07-25 17:02:43] 2025-07-25 21:02:09,401 | INFO     | chi2: 0.3140974434207679
[2025-07-25 17:02:43] 2025-07-25 21:02:09,401 | INFO     | current chi2=0.3140974434207679 (change=6.069557023581903 %)
[2025-07-25 17:02:43] 2025-07-25 21:02:09,402 | INFO     | left removable region: 20
[2025-07-25 17:02:43] 2025-07-25 21:02:09,402 | INFO     | sum of square deviations: 12512370563.947632
[2025-07-25 17:02:43] 2025-07-25 21:02:09,406 | INFO     | sum of deviations: -23606710814.54516
[2025-07-25 17:02:43] 2025-07-25 21:02:09,406 | INFO     | mean x: 1753466473.0553937
[2025-07-25 17:02:43] 2025-07-25 21:02:09,407 | INFO     | mean y: 2658057.186588921
[2025-07-25 17:02:43] 2025-07-25 21:02:09,407 | INFO     | -- intersect: 3310870177.413271
[2025-07-25 17:02:43] 2025-07-25 21:02:09,407 | INFO     | intersect: 3310870177.413271
[2025-07-25 17:02:43] 2025-07-25 21:02:09,407 | INFO     | chi2: 0.19494284261968722
[2025-07-25 17:02:43] 2025-07-25 21:02:09,408 | INFO     | -- intersect: 3310870177.413271
[2025-07-25 17:02:43] 2025-07-25 21:02:09,408 | INFO     | current memory leak: -1.89 B/s (using 343 data points, chi2=0.19)
[2025-07-25 17:02:43] 2025-07-25 21:02:09,409 | INFO     | could have reported an average CPU frequency of 2599 MHz (16 samples)
[2025-07-25 17:02:43] 2025-07-25 21:02:09,409 | INFO     | ..............................
[2025-07-25 17:02:43] 2025-07-25 21:02:09,409 | INFO     | . Timing measurements:
[2025-07-25 17:02:43] 2025-07-25 21:02:09,410 | INFO     | . get job = 0 s
[2025-07-25 17:02:43] 2025-07-25 21:02:09,410 | INFO     | . initial setup = 3 s
[2025-07-25 17:02:43] 2025-07-25 21:02:09,410 | INFO     | . payload setup = 24 s
[2025-07-25 17:02:43] 2025-07-25 21:02:09,410 | INFO     | . stage-in = 0 s
[2025-07-25 17:02:43] 2025-07-25 21:02:09,410 | INFO     | . payload execution = 22508 s
[2025-07-25 17:02:43] 2025-07-25 21:02:09,410 | INFO     | . stage-out = 3 s
[2025-07-25 17:02:43] 2025-07-25 21:02:09,410 | INFO     | . log creation = 0 s
[2025-07-25 17:02:43] 2025-07-25 21:02:09,410 | INFO     | ..............................
[2025-07-25 17:02:43] 2025-07-25 21:02:09,977 | INFO     | 
[2025-07-25 17:02:43] 2025-07-25 21:02:09,977 | INFO     | job summary report
[2025-07-25 17:02:43] 2025-07-25 21:02:09,977 | INFO     | --------------------------------------------------
[2025-07-25 17:02:43] 2025-07-25 21:02:09,977 | INFO     | PanDA job id: 6744975982
[2025-07-25 17:02:43] 2025-07-25 21:02:09,977 | INFO     | task id: 45743349
[2025-07-25 17:02:43] 2025-07-25 21:02:09,977 | INFO     | errors: (none)
[2025-07-25 17:02:43] 2025-07-25 21:02:09,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 17:02:43] 2025-07-25 21:02:09,978 | INFO     | pilot state: finished 
[2025-07-25 17:02:43] 2025-07-25 21:02:09,978 | INFO     | transexitcode: 0
[2025-07-25 17:02:43] 2025-07-25 21:02:09,978 | INFO     | exeerrorcode: 0
[2025-07-25 17:02:43] 2025-07-25 21:02:09,978 | INFO     | exeerrordiag: 
[2025-07-25 17:02:43] 2025-07-25 21:02:09,978 | INFO     | exitcode: 0
[2025-07-25 17:02:43] 2025-07-25 21:02:09,978 | INFO     | exitmsg: OK
[2025-07-25 17:02:43] 2025-07-25 21:02:09,978 | INFO     | cpuconsumptiontime: 61931 s
[2025-07-25 17:02:43] 2025-07-25 21:02:09,978 | INFO     | nevents: 400
[2025-07-25 17:02:43] 2025-07-25 21:02:09,978 | INFO     | neventsw: 0
[2025-07-25 17:02:43] 2025-07-25 21:02:09,978 | INFO     | pid: 3241857
[2025-07-25 17:02:43] 2025-07-25 21:02:09,979 | INFO     | pgrp: 3241857
[2025-07-25 17:02:43] 2025-07-25 21:02:09,979 | INFO     | corecount: 10
[2025-07-25 17:02:43] 2025-07-25 21:02:09,979 | INFO     | event service: False
[2025-07-25 17:02:43] 2025-07-25 21:02:09,979 | INFO     | sizes: {0: 2397251, 1: 2397251, 2: 2397450, 3: 2397506, 14: 2397506, 16: 2397796, 25: 2397952, 22536: 2431902, 22537: 2431901, 22540: 2440955, 22542: 2441011, 2255
[2025-07-25 17:02:43] 2025-07-25 21:02:09,979 | INFO     | --------------------------------------------------
[2025-07-25 17:02:43] 2025-07-25 21:02:09,979 | INFO     | 
[2025-07-25 17:02:43] 2025-07-25 21:02:09,979 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 17:02:43] 2025-07-25 21:02:10,071 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,071 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,072 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,072 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,073 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,073 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,073 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,074 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,074 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,074 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,074 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,074 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 17:02:43] 2025-07-25 21:02:10,074 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,074 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 17:02:43] 2025-07-25 21:02:10,074 | INFO     | job 6744975982 has completed (purged errors)
[2025-07-25 17:02:43] 2025-07-25 21:02:10,075 | INFO     | overall cleanup function is called
[2025-07-25 17:02:43] 2025-07-25 21:02:10,339 | INFO     | PID=3235101 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-25 17:02:43] 2025-07-25 21:02:10,340 | INFO     | .. there are 6 such processes running
[2025-07-25 17:02:43] 2025-07-25 21:02:11,086 | INFO     | --- collectZombieJob: --- 10, [3241857]
[2025-07-25 17:02:43] 2025-07-25 21:02:11,086 | INFO     | zombie collector waiting for pid 3241857
[2025-07-25 17:02:43] 2025-07-25 21:02:11,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 17:02:43] 2025-07-25 21:02:11,086 | INFO     | collected zombie processes
[2025-07-25 17:02:43] 2025-07-25 21:02:11,086 | INFO     | will attempt to kill all subprocesses of pid=3241857
[2025-07-25 17:02:43] 2025-07-25 21:02:11,318 | INFO     | process IDs to be killed: [3241857] (in reverse order)
[2025-07-25 17:02:43] 2025-07-25 21:02:11,538 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 17:02:43] 2025-07-25 21:02:11,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 17:02:43] 2025-07-25 21:02:11,547 | INFO     | did not find any defunct processes belonging to 3241857
[2025-07-25 17:02:43] 2025-07-25 21:02:11,557 | INFO     | did not find any defunct processes belonging to 3241857
[2025-07-25 17:02:43] 2025-07-25 21:02:11,557 | INFO     | ready for new job
[2025-07-25 17:02:43] 2025-07-25 21:02:11,558 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 17:02:43] 2025-07-25 21:02:11,560 | INFO     | ***************************************
[2025-07-25 17:02:43] 2025-07-25 21:02:11,561 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 17:02:43] 2025-07-25 21:02:11,561 | INFO     | ***************************************
[2025-07-25 17:02:43] 2025-07-25 21:02:11,561 | INFO     | 
[2025-07-25 17:02:43] 2025-07-25 21:02:11,563 | INFO     | architecture information:
[2025-07-25 17:02:43] 2025-07-25 21:02:11,563 | INFO     | executing command: cat /etc/os-release
[2025-07-25 17:02:43] 2025-07-25 21:02:11,590 | INFO     | cat /etc/os-release:
[2025-07-25 17:02:43] NAME="CentOS Linux"
[2025-07-25 17:02:43] VERSION="7 (Core)"
[2025-07-25 17:02:43] ID="centos"
[2025-07-25 17:02:43] ID_LIKE="rhel fedora"
[2025-07-25 17:02:43] VERSION_ID="7"
[2025-07-25 17:02:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 17:02:43] ANSI_COLOR="0;31"
[2025-07-25 17:02:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 17:02:43] HOME_URL="https://www.centos.org/"
[2025-07-25 17:02:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 17:02:43] 
[2025-07-25 17:02:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 17:02:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 17:02:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 17:02:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 17:02:43] 
[2025-07-25 17:02:43] 2025-07-25 21:02:11,591 | INFO     | ***************************************
[2025-07-25 17:02:43] 2025-07-25 21:02:12,094 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 17:02:43] 2025-07-25 21:02:12,117 | INFO     | sufficient remaining disk space (53828648960 B)
[2025-07-25 17:02:43] 2025-07-25 21:02:12,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 17:02:43] 2025-07-25 21:02:12,118 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 17:02:43] 2025-07-25 21:02:12,118 | INFO     | update_server=False
[2025-07-25 17:02:43] 2025-07-25 21:02:12,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 17:02:43] 2025-07-25 21:02:12,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 17:02:43] 2025-07-25 21:02:12,119 | INFO     | aborting loop
[2025-07-25 17:02:43] 2025-07-25 21:02:12,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 17:02:43] 2025-07-25 21:02:12,333 | INFO     | all payload control threads have been joined
[2025-07-25 17:02:43] 2025-07-25 21:02:12,794 | INFO     | all job control threads have been joined
[2025-07-25 17:02:43] 2025-07-25 21:02:12,881 | INFO     | all data control threads have been joined
[2025-07-25 17:02:43] 2025-07-25 21:02:13,078 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 17:02:43] 2025-07-25 21:02:13,125 | INFO     | [job] retrieve thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:13,126 | INFO     | [job] job monitor thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:13,340 | INFO     | [payload] control thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:13,355 | INFO     | [payload] validate_post thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:13,487 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:13,800 | INFO     | [job] control thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:13,876 | INFO     | [data] copytool_in thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:13,877 | INFO     | [job] validate thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:13,887 | INFO     | [data] control thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:14,128 | INFO     | [data] copytool_out thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:14,331 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:14,373 | INFO     | [payload] failed_post thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:14,436 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:14,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 17:02:43] 2025-07-25 21:02:14,624 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:15,549 | INFO     | [job] queue monitor thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:17,086 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 17:02:43] 2025-07-25 21:02:17,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140668302772032)>', '<ExcThread(monitor, started 140667787388672)>']
[2025-07-25 17:02:43] 2025-07-25 21:02:22,731 | INFO     | all workflow threads have been joined
[2025-07-25 17:02:43] 2025-07-25 21:02:22,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 17:02:43] 2025-07-25 21:02:22,735 | INFO     | traces error code: 0
[2025-07-25 17:02:43] 2025-07-25 21:02:22,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 17:02:43] 2025-07-25 21:02:42,956 | INFO     | PID=3235101 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 17:02:43] 2025-07-25 21:02:42,956 | INFO     | .. there are 6 such processes running
[2025-07-25 17:02:43] 2025-07-25 21:02:42,958 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 17:02:43] 2025-07-25 21:02:42,958 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 17:02:43] 2025-07-25 21:02:42,958 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 17:02:43] 2025-07-25 21:02:42,958 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 17:02:43] 2025-07-25 21:02:42,958 | INFO     | [monitor] control thread has ended
[2025-07-25 17:02:43] 2025-07-25 21:02:43,271 [wrapper] ==== pilot stdout END ====
[2025-07-25 17:02:43] 2025-07-25 21:02:43,275 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 17:02:43] 2025-07-25 21:02:43,279 [wrapper] pilotpid: 3235101
[2025-07-25 17:02:43] 2025-07-25 21:02:43,283 [wrapper] Pilot exit status: 0
[2025-07-25 17:02:43] 2025-07-25 21:02:43,379 [wrapper] pandaids: 6744975982
[2025-07-25 17:02:43] 2025-07-25 21:02:43,430 [wrapper] cleanup supervisor_pilot 3673881 3235102
[2025-07-25 17:02:43] 2025-07-25 21:02:43,434 [wrapper] Test setup, not cleaning
[2025-07-25 17:02:43] 2025-07-25 21:02:43,438 [wrapper] apfmon messages muted
[2025-07-25 17:02:43] 2025-07-25 21:02:43,442 [wrapper] ==== wrapper stdout END ====
[2025-07-25 17:02:43] 2025-07-25 21:02:43,446 [wrapper] ==== wrapper stderr END ====
[2025-07-25 17:02:43]  *** Error codes and diagnostics ***
[2025-07-25 17:02:43]     "exeErrorCode": 0,
[2025-07-25 17:02:43]     "exeErrorDiag": "",
[2025-07-25 17:02:43]     "pilotErrorCode": 0,
[2025-07-25 17:02:43]     "pilotErrorDiag": "",
[2025-07-25 17:02:43]  *** Listing of results directory ***
[2025-07-25 17:02:43] total 435944
[2025-07-25 17:02:43] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 04:34 pilot3.tar.gz
[2025-07-25 17:02:43] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 04:36 queuedata.json
[2025-07-25 17:02:43] -rwx------. 1 boincer umatlas     36292 Jul 25 04:38 runpilot2-wrapper.sh
[2025-07-25 17:02:43] -rw-r--r--. 1 boincer umatlas       100 Jul 25 10:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 17:02:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 10:44 run_atlas
[2025-07-25 17:02:43] -rw-r--r--. 1 boincer umatlas       105 Jul 25 10:44 job.xml
[2025-07-25 17:02:43] -rw-r--r--. 2 boincer umatlas 230885677 Jul 25 10:45 EVNT.45743347._000964.pool.root.1
[2025-07-25 17:02:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 10:45 start_atlas.sh
[2025-07-25 17:02:43] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 10:45 shared
[2025-07-25 17:02:43] -rw-r--r--. 2 boincer umatlas    542896 Jul 25 10:45 input.tar.gz
[2025-07-25 17:02:43] -rw-r--r--. 1 boincer umatlas         0 Jul 25 10:45 boinc_lockfile
[2025-07-25 17:02:43] -rw-r--r--. 1 boincer umatlas      2561 Jul 25 10:45 pandaJob.out
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas    979325 Jul 25 10:45 agis_schedconf.cvmfs.json
[2025-07-25 17:02:43] drwx------. 4 boincer umatlas      4096 Jul 25 10:45 pilot3
[2025-07-25 17:02:43] -rw-r--r--. 1 boincer umatlas      6657 Jul 25 16:54 init_data.xml
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas 207009150 Jul 25 17:01 HITS.45743349._018545.pool.root.1
[2025-07-25 17:02:43] -rw-r--r--. 1 boincer umatlas       531 Jul 25 17:01 boinc_task_state.xml
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas      1042 Jul 25 17:01 memory_monitor_summary.json
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas   1593052 Jul 25 17:01 agis_ddmendpoints.agis.ALL.json
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas    502332 Jul 25 17:01 log.45743349._018545.job.log.tgz.1
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas      7825 Jul 25 17:02 heartbeat.json
[2025-07-25 17:02:43] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 17:02 boinc_mmap_file
[2025-07-25 17:02:43] -rw-r--r--. 1 boincer umatlas        28 Jul 25 17:02 wrapper_checkpoint.txt
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas        95 Jul 25 17:02 pilot_heartbeat.json
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas       822 Jul 25 17:02 pilotlog.txt
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas   1814546 Jul 25 17:02 log.45743349._018545.job.log.1
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas       357 Jul 25 17:02 output.list
[2025-07-25 17:02:43] -rw-r--r--. 1 boincer umatlas       620 Jul 25 17:02 runtime_log
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas   2334720 Jul 25 17:02 result.tar.gz
[2025-07-25 17:02:43] -rw-r--r--. 1 boincer umatlas      8658 Jul 25 17:02 runtime_log.err
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas       656 Jul 25 17:02 pPqKDmE8Sz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmu5OLDmmYUVWn.diag
[2025-07-25 17:02:43] -rw-r--r--. 1 boincer umatlas     21359 Jul 25 17:02 stderr.txt
[2025-07-25 17:02:43] HITS file was successfully produced:
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas 207009150 Jul 25 17:01 shared/HITS.pool.root.1
[2025-07-25 17:02:43]  *** Contents of shared directory: ***
[2025-07-25 17:02:43] total 430472
[2025-07-25 17:02:43] -rw-r--r--. 2 boincer umatlas 230885677 Jul 25 10:45 ATLAS.root_0
[2025-07-25 17:02:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 10:45 start_atlas.sh
[2025-07-25 17:02:43] -rw-r--r--. 2 boincer umatlas    542896 Jul 25 10:45 input.tar.gz
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas 207009150 Jul 25 17:01 HITS.pool.root.1
[2025-07-25 17:02:43] -rw-------. 1 boincer umatlas   2334720 Jul 25 17:02 result.tar.gz
17:02:45 (3231022): run_atlas exited; CPU time 62362.478285
17:02:45 (3231022): called boinc_finish(0)

</stderr_txt>
]]>

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