Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:59:19 (204099): wrapper (7.7.26015): starting
02:59:19 (204099): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 02:59:19] Arguments: --nthreads 4
[2025-07-28 02:59:19] Threads: 4
[2025-07-28 02:59:19] Checking for CVMFS
[2025-07-28 02:59:19] No cvmfs_config command found, will try listing directly
[2025-07-28 02:59:19] CVMFS is ok
[2025-07-28 02:59:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 02:59:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 02:59:19] Further information can be found at the LHC@home message board.
[2025-07-28 02:59:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 02:59:19] Checking for apptainer binary...
[2025-07-28 02:59:19] which: no apptainer in ((null))
[2025-07-28 02:59:19] apptainer is not installed, using version from CVMFS
[2025-07-28 02:59:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 02:59:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-07-28 02:59:20] apptainer works
[2025-07-28 02:59:20] Set ATHENA_PROC_NUMBER=4
[2025-07-28 02:59:20] Set ATHENA_CORE_NUMBER=4
[2025-07-28 02:59:20] Starting ATLAS job with PandaID=6744978141
[2025-07-28 02:59:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 06:33:27]  *** The last 200 lines of the pilot log: ***
[2025-07-28 06:33:27] 2025-07-28 04:32:54,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 06:33:27] 2025-07-28 04:32:54,589 | INFO     | fitting pss+swap vs Time
[2025-07-28 06:33:27] 2025-07-28 04:32:54,590 | INFO     | sum of square deviations: 2871616632.5
[2025-07-28 06:33:27] 2025-07-28 04:32:54,591 | INFO     | sum of deviations: 19341004833.0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,591 | INFO     | mean x: 1753670784.5
[2025-07-28 06:33:27] 2025-07-28 04:32:54,591 | INFO     | mean y: 2304240.3238095236
[2025-07-28 06:33:27] 2025-07-28 04:32:54,592 | INFO     | -- intersect: -11809075710.131819
[2025-07-28 06:33:27] 2025-07-28 04:32:54,592 | INFO     | intersect: -11809075710.131819
[2025-07-28 06:33:27] 2025-07-28 04:32:54,592 | INFO     | chi2: 2.26114061867653
[2025-07-28 06:33:27] 2025-07-28 04:32:54,593 | INFO     | sum of square deviations: 2671343110.0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,594 | INFO     | sum of deviations: 31769806378.0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,594 | INFO     | mean x: 1753670632.0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,594 | INFO     | mean y: 2313511.4097560975
[2025-07-28 06:33:27] 2025-07-28 04:32:54,594 | INFO     | -- intersect: -20853778025.788883
[2025-07-28 06:33:27] 2025-07-28 04:32:54,594 | INFO     | intersect: -20853778025.788883
[2025-07-28 06:33:27] 2025-07-28 04:32:54,594 | INFO     | chi2: 1.4694170921593743
[2025-07-28 06:33:27] 2025-07-28 04:32:54,595 | INFO     | current chi2=1.4694170921593743 (change=35.014342760361366 %)
[2025-07-28 06:33:27] 2025-07-28 04:32:54,595 | INFO     | sum of square deviations: 2480604650.0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,596 | INFO     | sum of deviations: 30839102141.499996
[2025-07-28 06:33:27] 2025-07-28 04:32:54,596 | INFO     | mean x: 1753670479.5
[2025-07-28 06:33:27] 2025-07-28 04:32:54,596 | INFO     | mean y: 2312767.185
[2025-07-28 06:33:27] 2025-07-28 04:32:54,596 | INFO     | -- intersect: -21799477792.158573
[2025-07-28 06:33:27] 2025-07-28 04:32:54,596 | INFO     | intersect: -21799477792.158573
[2025-07-28 06:33:27] 2025-07-28 04:32:54,597 | INFO     | chi2: 1.4701899840582817
[2025-07-28 06:33:27] 2025-07-28 04:32:54,597 | INFO     | current chi2=1.4701899840582817 (change=-0.05259853740857141 %)
[2025-07-28 06:33:27] 2025-07-28 04:32:54,597 | INFO     | right removable region: 199
[2025-07-28 06:33:27] 2025-07-28 04:32:54,597 | INFO     | sum of square deviations: 2671343110.0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,598 | INFO     | sum of deviations: -10296212387.0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,599 | INFO     | mean x: 1753670937.0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,599 | INFO     | mean y: 2326556.507317073
[2025-07-28 06:33:27] 2025-07-28 04:32:54,599 | INFO     | -- intersect: 6761536317.570656
[2025-07-28 06:33:27] 2025-07-28 04:32:54,599 | INFO     | intersect: 6761536317.570656
[2025-07-28 06:33:27] 2025-07-28 04:32:54,599 | INFO     | chi2: 0.8168678039658004
[2025-07-28 06:33:27] 2025-07-28 04:32:54,599 | INFO     | current chi2=0.8168678039658004 (change=63.87363982502239 %)
[2025-07-28 06:33:27] 2025-07-28 04:32:54,600 | INFO     | sum of square deviations: 2480604650.0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,601 | INFO     | sum of deviations: -9112019875.0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,601 | INFO     | mean x: 1753671089.5
[2025-07-28 06:33:27] 2025-07-28 04:32:54,601 | INFO     | mean y: 2325607.75
[2025-07-28 06:33:27] 2025-07-28 04:32:54,601 | INFO     | -- intersect: 6444096093.722807
[2025-07-28 06:33:27] 2025-07-28 04:32:54,601 | INFO     | intersect: 6444096093.722807
[2025-07-28 06:33:27] 2025-07-28 04:32:54,601 | INFO     | chi2: 0.816082587118995
[2025-07-28 06:33:27] 2025-07-28 04:32:54,602 | INFO     | current chi2=0.816082587118995 (change=0.09612532688805923 %)
[2025-07-28 06:33:27] 2025-07-28 04:32:54,602 | INFO     | left removable region: 20
[2025-07-28 06:33:27] 2025-07-28 04:32:54,602 | INFO     | sum of square deviations: 1778377530.0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,603 | INFO     | sum of deviations: 3972955681.0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,603 | INFO     | mean x: 1753671059.0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,603 | INFO     | mean y: 2334894.558659218
[2025-07-28 06:33:27] 2025-07-28 04:32:54,603 | INFO     | -- intersect: -3915425692.789369
[2025-07-28 06:33:27] 2025-07-28 04:32:54,603 | INFO     | intersect: -3915425692.789369
[2025-07-28 06:33:27] 2025-07-28 04:32:54,604 | INFO     | chi2: 0.00026488125582257104
[2025-07-28 06:33:27] 2025-07-28 04:32:54,604 | INFO     | -- intersect: -3915425692.789369
[2025-07-28 06:33:27] 2025-07-28 04:32:54,604 | INFO     | current memory leak: 2.23 B/s (using 179 data points, chi2=0.00)
[2025-07-28 06:33:27] 2025-07-28 04:32:54,605 | INFO     | could have reported an average CPU frequency of 2542 MHz (11 samples)
[2025-07-28 06:33:27] 2025-07-28 04:32:54,605 | INFO     | ..............................
[2025-07-28 06:33:27] 2025-07-28 04:32:54,605 | INFO     | . Timing measurements:
[2025-07-28 06:33:27] 2025-07-28 04:32:54,605 | INFO     | . get job = 0 s
[2025-07-28 06:33:27] 2025-07-28 04:32:54,605 | INFO     | . initial setup = 1 s
[2025-07-28 06:33:27] 2025-07-28 04:32:54,605 | INFO     | . payload setup = 10 s
[2025-07-28 06:33:27] 2025-07-28 04:32:54,605 | INFO     | . stage-in = 0 s
[2025-07-28 06:33:27] 2025-07-28 04:32:54,605 | INFO     | . payload execution = 12762 s
[2025-07-28 06:33:27] 2025-07-28 04:32:54,605 | INFO     | . stage-out = 1 s
[2025-07-28 06:33:27] 2025-07-28 04:32:54,605 | INFO     | . log creation = 0 s
[2025-07-28 06:33:27] 2025-07-28 04:32:54,605 | INFO     | ..............................
[2025-07-28 06:33:27] 2025-07-28 04:32:54,701 | INFO     | 
[2025-07-28 06:33:27] 2025-07-28 04:32:54,702 | INFO     | job summary report
[2025-07-28 06:33:27] 2025-07-28 04:32:54,702 | INFO     | --------------------------------------------------
[2025-07-28 06:33:27] 2025-07-28 04:32:54,702 | INFO     | PanDA job id: 6744978141
[2025-07-28 06:33:27] 2025-07-28 04:32:54,702 | INFO     | task id: 45743349
[2025-07-28 06:33:27] 2025-07-28 04:32:54,702 | INFO     | errors: (none)
[2025-07-28 06:33:27] 2025-07-28 04:32:54,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 06:33:27] 2025-07-28 04:32:54,702 | INFO     | pilot state: finished 
[2025-07-28 06:33:27] 2025-07-28 04:32:54,702 | INFO     | transexitcode: 0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,702 | INFO     | exeerrorcode: 0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,702 | INFO     | exeerrordiag: 
[2025-07-28 06:33:27] 2025-07-28 04:32:54,702 | INFO     | exitcode: 0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,702 | INFO     | exitmsg: OK
[2025-07-28 06:33:27] 2025-07-28 04:32:54,703 | INFO     | cpuconsumptiontime: 49202 s
[2025-07-28 06:33:27] 2025-07-28 04:32:54,703 | INFO     | nevents: 400
[2025-07-28 06:33:27] 2025-07-28 04:32:54,703 | INFO     | neventsw: 0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,703 | INFO     | pid: 214697
[2025-07-28 06:33:27] 2025-07-28 04:32:54,703 | INFO     | pgrp: 214697
[2025-07-28 06:33:27] 2025-07-28 04:32:54,703 | INFO     | corecount: 4
[2025-07-28 06:33:27] 2025-07-28 04:32:54,703 | INFO     | event service: False
[2025-07-28 06:33:27] 2025-07-28 04:32:54,703 | INFO     | sizes: {0: 2396645, 1: 2397512, 7: 2397774, 12: 2397802, 12776: 2427883, 12777: 2436903, 12779: 2437087, 12784: 2437281}
[2025-07-28 06:33:27] 2025-07-28 04:32:54,703 | INFO     | --------------------------------------------------
[2025-07-28 06:33:27] 2025-07-28 04:32:54,703 | INFO     | 
[2025-07-28 06:33:27] 2025-07-28 04:32:54,703 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-07-28 06:33:27] 2025-07-28 04:32:54,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,723 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,723 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 06:33:27] 2025-07-28 04:32:54,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 06:33:27] 2025-07-28 04:32:54,725 | INFO     | job 6744978141 has completed (purged errors)
[2025-07-28 06:33:27] 2025-07-28 04:32:54,725 | INFO     | overall cleanup function is called
[2025-07-28 06:33:27] 2025-07-28 04:32:55,733 | INFO     | --- collectZombieJob: --- 10, [214697]
[2025-07-28 06:33:27] 2025-07-28 04:32:55,733 | INFO     | zombie collector waiting for pid 214697
[2025-07-28 06:33:27] 2025-07-28 04:32:55,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 06:33:27] 2025-07-28 04:32:55,734 | INFO     | collected zombie processes
[2025-07-28 06:33:27] 2025-07-28 04:32:55,734 | INFO     | will attempt to kill all subprocesses of pid=214697
[2025-07-28 06:33:27] 2025-07-28 04:32:56,063 | INFO     | process IDs to be killed: [214697] (in reverse order)
[2025-07-28 06:33:27] 2025-07-28 04:32:56,170 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 06:33:27] 2025-07-28 04:32:56,171 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 06:33:27] 2025-07-28 04:32:56,181 | INFO     | did not find any defunct processes belonging to 214697
[2025-07-28 06:33:27] 2025-07-28 04:32:56,191 | INFO     | did not find any defunct processes belonging to 214697
[2025-07-28 06:33:27] 2025-07-28 04:32:56,191 | INFO     | ready for new job
[2025-07-28 06:33:27] 2025-07-28 04:32:56,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 06:33:27] 2025-07-28 04:32:56,193 | INFO     | ***************************************
[2025-07-28 06:33:27] 2025-07-28 04:32:56,193 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 06:33:27] 2025-07-28 04:32:56,193 | INFO     | ***************************************
[2025-07-28 06:33:27] 2025-07-28 04:32:56,193 | INFO     | 
[2025-07-28 06:33:27] 2025-07-28 04:32:56,197 | INFO     | architecture information:
[2025-07-28 06:33:27] 2025-07-28 04:32:56,197 | INFO     | executing command: cat /etc/os-release
[2025-07-28 06:33:27] 2025-07-28 04:32:56,211 | INFO     | cat /etc/os-release:
[2025-07-28 06:33:27] NAME="CentOS Linux"
[2025-07-28 06:33:27] VERSION="7 (Core)"
[2025-07-28 06:33:27] ID="centos"
[2025-07-28 06:33:27] ID_LIKE="rhel fedora"
[2025-07-28 06:33:27] VERSION_ID="7"
[2025-07-28 06:33:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 06:33:27] ANSI_COLOR="0;31"
[2025-07-28 06:33:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 06:33:27] HOME_URL="https://www.centos.org/"
[2025-07-28 06:33:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 06:33:27] 
[2025-07-28 06:33:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 06:33:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 06:33:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 06:33:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 06:33:27] 
[2025-07-28 06:33:27] 2025-07-28 04:32:56,212 | INFO     | ***************************************
[2025-07-28 06:33:27] 2025-07-28 04:32:56,715 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-07-28 06:33:27] 2025-07-28 04:32:56,729 | INFO     | sufficient remaining disk space (665796476928 B)
[2025-07-28 06:33:27] 2025-07-28 04:32:56,730 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 06:33:27] 2025-07-28 04:32:56,730 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 06:33:27] 2025-07-28 04:32:56,730 | INFO     | update_server=False
[2025-07-28 06:33:27] 2025-07-28 04:32:56,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 06:33:27] 2025-07-28 04:32:56,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 06:33:27] 2025-07-28 04:32:56,913 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 06:33:27] 2025-07-28 04:32:56,913 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 06:33:27] 2025-07-28 04:32:56,913 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:33:27] 2025-07-28 04:32:56,913 | INFO     | will abort loop
[2025-07-28 06:33:27] 2025-07-28 04:32:57,581 | INFO     | all data control threads have been joined
[2025-07-28 06:33:27] 2025-07-28 04:32:57,682 | INFO     | all payload control threads have been joined
[2025-07-28 06:33:27] 2025-07-28 04:32:57,735 | INFO     | [job] retrieve thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:32:57,789 | INFO     | [data] copytool_in thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:32:57,918 | INFO     | [job] job monitor thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:32:58,041 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:32:58,071 | INFO     | all job control threads have been joined
[2025-07-28 06:33:27] 2025-07-28 04:32:58,586 | INFO     | [data] control thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:32:58,643 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:32:58,687 | INFO     | [payload] control thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:32:58,732 | INFO     | [data] copytool_out thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:32:58,843 | INFO     | [payload] validate_post thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:32:58,843 | INFO     | [payload] failed_post thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:32:58,981 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:32:59,076 | INFO     | [job] control thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:32:59,143 | INFO     | [job] validate thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:32:59,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:33:27] 2025-07-28 04:32:59,977 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 06:33:27] 2025-07-28 04:33:00,715 | INFO     | [job] queue monitor thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:33:03,982 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:33:07,324 | INFO     | job.realtimelogging is not enabled
[2025-07-28 06:33:27] 2025-07-28 04:33:08,329 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 06:33:27] 2025-07-28 04:33:08,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22635847436096)>', '<ExcThread(monitor, started 22635534579456)>']
[2025-07-28 06:33:27] 2025-07-28 04:33:13,534 | INFO     | all workflow threads have been joined
[2025-07-28 06:33:27] 2025-07-28 04:33:13,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 06:33:27] 2025-07-28 04:33:13,534 | INFO     | traces error code: 0
[2025-07-28 06:33:27] 2025-07-28 04:33:13,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 06:33:27] 2025-07-28 04:33:26,987 | INFO     | PID=207765 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 06:33:27] 2025-07-28 04:33:26,988 | INFO     | .. there are 13 such processes running
[2025-07-28 06:33:27] 2025-07-28 04:33:26,988 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 06:33:27] 2025-07-28 04:33:26,989 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 06:33:27] 2025-07-28 04:33:26,989 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 06:33:27] 2025-07-28 04:33:26,989 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 06:33:27] 2025-07-28 04:33:26,989 | INFO     | [monitor] control thread has ended
[2025-07-28 06:33:27] 2025-07-28 04:33:27,122 [wrapper] ==== pilot stdout END ====
[2025-07-28 06:33:27] 2025-07-28 04:33:27,125 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 06:33:27] 2025-07-28 04:33:27,127 [wrapper] pilotpid: 207765
[2025-07-28 06:33:27] 2025-07-28 04:33:27,129 [wrapper] Pilot exit status: 0
[2025-07-28 06:33:27] 2025-07-28 04:33:27,139 [wrapper] pandaids: 6744978141
[2025-07-28 06:33:27] 2025-07-28 04:33:27,200 [wrapper] cleanup supervisor_pilot  746450 207766
[2025-07-28 06:33:27] 2025-07-28 04:33:27,203 [wrapper] Test setup, not cleaning
[2025-07-28 06:33:27] 2025-07-28 04:33:27,205 [wrapper] apfmon messages muted
[2025-07-28 06:33:27] 2025-07-28 04:33:27,207 [wrapper] ==== wrapper stdout END ====
[2025-07-28 06:33:27] 2025-07-28 04:33:27,210 [wrapper] ==== wrapper stderr END ====
[2025-07-28 06:33:27]  *** Error codes and diagnostics ***
[2025-07-28 06:33:27]     "exeErrorCode": 0,
[2025-07-28 06:33:27]     "exeErrorDiag": "",
[2025-07-28 06:33:27]     "pilotErrorCode": 0,
[2025-07-28 06:33:27]     "pilotErrorDiag": "",
[2025-07-28 06:33:27]  *** Listing of results directory ***
[2025-07-28 06:33:27] total 434172
[2025-07-28 06:33:27] -rw-r--r-- 1 boinc boinc    530466 Jul 25 10:34 pilot3.tar.gz
[2025-07-28 06:33:27] -rw-r--r-- 1 boinc boinc      5112 Jul 25 10:40 queuedata.json
[2025-07-28 06:33:27] -rwx------ 1 boinc boinc     36292 Jul 25 10:41 runpilot2-wrapper.sh
[2025-07-28 06:33:27] -rw-r--r-- 1 boinc boinc       100 Jul 28 02:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 06:33:27] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 02:59 run_atlas
[2025-07-28 06:33:27] -rw-r--r-- 1 boinc boinc       105 Jul 28 02:59 job.xml
[2025-07-28 06:33:27] -rw-r--r-- 2 boinc boinc 230040838 Jul 28 02:59 EVNT.45743347._000968.pool.root.1
[2025-07-28 06:33:27] -rw-r--r-- 1 boinc boinc      6635 Jul 28 02:59 init_data.xml
[2025-07-28 06:33:27] -rw-r--r-- 2 boinc boinc     15095 Jul 28 02:59 start_atlas.sh
[2025-07-28 06:33:27] drwxrwx--x 2 boinc boinc      4096 Jul 28 02:59 shared
[2025-07-28 06:33:27] -rw-r--r-- 2 boinc boinc    542889 Jul 28 02:59 input.tar.gz
[2025-07-28 06:33:27] -rw-r--r-- 1 boinc boinc         0 Jul 28 02:59 boinc_lockfile
[2025-07-28 06:33:27] -rw-r--r-- 1 boinc boinc      2562 Jul 28 02:59 pandaJob.out
[2025-07-28 06:33:27] -rw------- 1 boinc boinc    980125 Jul 28 02:59 agis_schedconf.cvmfs.json
[2025-07-28 06:33:27] drwx------ 4 boinc boinc      4096 Jul 28 02:59 pilot3
[2025-07-28 06:33:27] -rw------- 1 boinc boinc 207580059 Jul 28 06:32 HITS.45743349._018644.pool.root.1
[2025-07-28 06:33:27] -rw-r--r-- 1 boinc boinc       530 Jul 28 06:32 boinc_task_state.xml
[2025-07-28 06:33:27] -rw------- 1 boinc boinc      1035 Jul 28 06:32 memory_monitor_summary.json
[2025-07-28 06:33:27] -rw------- 1 boinc boinc   1593052 Jul 28 06:32 agis_ddmendpoints.agis.ALL.json
[2025-07-28 06:33:27] -rw------- 1 boinc boinc    336877 Jul 28 06:32 log.45743349._018644.job.log.tgz.1
[2025-07-28 06:33:27] -rw------- 1 boinc boinc      7827 Jul 28 06:32 heartbeat.json
[2025-07-28 06:33:27] -rw-r--r-- 1 boinc boinc        28 Jul 28 06:33 wrapper_checkpoint.txt
[2025-07-28 06:33:27] -rw-r--r-- 1 boinc boinc      8192 Jul 28 06:33 boinc_mmap_file
[2025-07-28 06:33:27] -rw------- 1 boinc boinc        95 Jul 28 06:33 pilot_heartbeat.json
[2025-07-28 06:33:27] -rw------- 1 boinc boinc       822 Jul 28 06:33 pilotlog.txt
[2025-07-28 06:33:27] -rw------- 1 boinc boinc   1207135 Jul 28 06:33 log.45743349._018644.job.log.1
[2025-07-28 06:33:27] -rw------- 1 boinc boinc       357 Jul 28 06:33 output.list
[2025-07-28 06:33:27] -rw-r--r-- 1 boinc boinc       620 Jul 28 06:33 runtime_log
[2025-07-28 06:33:27] -rw------- 1 boinc boinc   1566720 Jul 28 06:33 result.tar.gz
[2025-07-28 06:33:27] -rw-r--r-- 1 boinc boinc      9027 Jul 28 06:33 runtime_log.err
[2025-07-28 06:33:27] -rw------- 1 boinc boinc       665 Jul 28 06:33 qrVNDmQATz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme6OLDmNOztSn.diag
[2025-07-28 06:33:27] -rw-r--r-- 1 boinc boinc     20677 Jul 28 06:33 stderr.txt
[2025-07-28 06:33:27] HITS file was successfully produced:
[2025-07-28 06:33:27] -rw------- 1 boinc boinc 207580059 Jul 28 06:32 shared/HITS.pool.root.1
[2025-07-28 06:33:27]  *** Contents of shared directory: ***
[2025-07-28 06:33:27] total 429456
[2025-07-28 06:33:27] -rw-r--r-- 2 boinc boinc 230040838 Jul 28 02:59 ATLAS.root_0
[2025-07-28 06:33:27] -rw-r--r-- 2 boinc boinc     15095 Jul 28 02:59 start_atlas.sh
[2025-07-28 06:33:27] -rw-r--r-- 2 boinc boinc    542889 Jul 28 02:59 input.tar.gz
[2025-07-28 06:33:27] -rw------- 1 boinc boinc 207580059 Jul 28 06:32 HITS.pool.root.1
[2025-07-28 06:33:27] -rw------- 1 boinc boinc   1566720 Jul 28 06:33 result.tar.gz
06:33:29 (204099): run_atlas exited; CPU time 49645.743690
06:33:29 (204099): called boinc_finish(0)

</stderr_txt>
]]>

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