Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:47:58 (4062192): wrapper (7.7.26015): starting
04:47:58 (4062192): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 04:47:58] Arguments: --nthreads 4
[2025-07-26 04:47:58] Threads: 4
[2025-07-26 04:47:58] Checking for CVMFS
[2025-07-26 04:47:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 04:47:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 04:47:58] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 04:47:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 04:47:58] 2.9.2.0 3362155 2037 89244 148761 0 57 28919335 36864001 0 130560 0 1868713 99.991 77475 3150 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-26 04:47:58] CVMFS is ok
[2025-07-26 04:47:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 04:47:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 04:47:58] Further information can be found at the LHC@home message board.
[2025-07-26 04:47:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 04:47:58] Checking for apptainer binary...
[2025-07-26 04:47:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 04:47:58] Running /usr/bin/apptainer --version
[2025-07-26 04:47:58] apptainer version 1.4.1-1.1
[2025-07-26 04:47:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 04:47:58] thA315b
[2025-07-26 04:47:58] apptainer works
[2025-07-26 04:47:58] Set ATHENA_PROC_NUMBER=4
[2025-07-26 04:47:58] Set ATHENA_CORE_NUMBER=4
[2025-07-26 04:47:58] Starting ATLAS job with PandaID=6744975799
[2025-07-26 04:47:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 05:58:44]  *** The last 200 lines of the pilot log: ***
[2025-07-26 05:58:44]  is_tar=False
[2025-07-26 05:58:44]  lfn=log.45743349._018362.job.log.tgz.1
[2025-07-26 05:58:44]  mtime=0
[2025-07-26 05:58:44]  protocol_id=None
[2025-07-26 05:58:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 05:58:44]  replicas=None
[2025-07-26 05:58:44]  scope=mc23_13p6TeV
[2025-07-26 05:58:44]  status=None
[2025-07-26 05:58:44]  status_code=0
[2025-07-26 05:58:44]  storage_token=
[2025-07-26 05:58:44]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6744975799/log.45743349._018362.job.log.tgz.1
[2025-07-26 05:58:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/16/log.45743349._018362.job.log.tgz.1
[2025-07-26 05:58:44]  workdir=None
[2025-07-26 05:58:44] ]
[2025-07-26 05:58:44] 2025-07-26 03:58:08,416 | INFO     | transferring file log.45743349._018362.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6744975799/log.45743349._018362.job.log.tgz.1 to /local/data/boinc/
[2025-07-26 05:58:44] 2025-07-26 03:58:08,416 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6744975799/log.45743349._018362.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0183
[2025-07-26 05:58:44] 2025-07-26 03:58:08,429 | INFO     | adding to output.list: log.45743349._018362.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/16/log.45743349._018362.job.log.tg
[2025-07-26 05:58:44] 2025-07-26 03:58:08,430 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 05:58:44] 2025-07-26 03:58:08,430 | INFO     | summary of transferred files:
[2025-07-26 05:58:44] 2025-07-26 03:58:08,430 | INFO     |  -- lfn=log.45743349._018362.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 05:58:44] 2025-07-26 03:58:08,430 | INFO     | stage-out finished correctly
[2025-07-26 05:58:44] 2025-07-26 03:58:08,460 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 05:58:44] 2025-07-26 03:58:08,487 | INFO     | job 6744975799 has state=finished
[2025-07-26 05:58:44] 2025-07-26 03:58:08,487 | INFO     | preparing for final server update for job 6744975799 in state='finished'
[2025-07-26 05:58:44] 2025-07-26 03:58:09,115 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-26 05:58:44] 2025-07-26 03:58:09,116 | INFO     | this job has now completed (state=finished)
[2025-07-26 05:58:44] 2025-07-26 03:58:09,116 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 05:58:44] 2025-07-26 03:58:09,116 | INFO     | log transfer has been attempted: DONE
[2025-07-26 05:58:44] 2025-07-26 03:58:09,116 | INFO     | job 6744975799 has finished - writing final server update
[2025-07-26 05:58:44] 2025-07-26 03:58:09,116 | INFO     | total number of processed events: 400 (read)
[2025-07-26 05:58:44] 2025-07-26 03:58:09,116 | INFO     | executing command: lscpu
[2025-07-26 05:58:44] 2025-07-26 03:58:09,133 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 05:58:44] 2025-07-26 03:58:11,570 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 05:58:44] 2025-07-26 03:58:11,572 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3695.2418124999995
[2025-07-26 05:58:44] 2025-07-26 03:58:11,573 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744975799/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:58:44] 2025-07-26 03:58:11,573 | INFO     | extracted standard info from prmon json
[2025-07-26 05:58:44] 2025-07-26 03:58:11,573 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 05:58:44] 2025-07-26 03:58:11,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 05:58:44] 2025-07-26 03:58:11,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 05:58:44] 2025-07-26 03:58:11,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 05:58:44] 2025-07-26 03:58:11,574 | INFO     | fitting pss+swap vs Time
[2025-07-26 05:58:44] 2025-07-26 03:58:11,574 | INFO     | sum of square deviations: 73882315.5
[2025-07-26 05:58:44] 2025-07-26 03:58:11,574 | INFO     | sum of deviations: -9740088014.000002
[2025-07-26 05:58:44] 2025-07-26 03:58:11,574 | INFO     | mean x: 1753500270.5
[2025-07-26 05:58:44] 2025-07-26 03:58:11,574 | INFO     | mean y: 2502087.4838709678
[2025-07-26 05:58:44] 2025-07-26 03:58:11,574 | INFO     | -- intersect: 231170770862.74728
[2025-07-26 05:58:44] 2025-07-26 03:58:11,574 | INFO     | intersect: 231170770862.74728
[2025-07-26 05:58:44] 2025-07-26 03:58:11,574 | INFO     | chi2: 0.12617816452925276
[2025-07-26 05:58:44] 2025-07-26 03:58:11,574 | INFO     | -- intersect: 231170770862.74728
[2025-07-26 05:58:44] 2025-07-26 03:58:11,574 | INFO     | current memory leak: -131.83 B/s (using 62 data points, chi2=0.13)
[2025-07-26 05:58:44] 2025-07-26 03:58:11,575 | INFO     | could have reported an average CPU frequency of 3932 MHz (6 samples)
[2025-07-26 05:58:44] 2025-07-26 03:58:11,575 | INFO     | ..............................
[2025-07-26 05:58:44] 2025-07-26 03:58:11,575 | INFO     | . Timing measurements:
[2025-07-26 05:58:44] 2025-07-26 03:58:11,575 | INFO     | . get job = 0 s
[2025-07-26 05:58:44] 2025-07-26 03:58:11,575 | INFO     | . initial setup = 1 s
[2025-07-26 05:58:44] 2025-07-26 03:58:11,575 | INFO     | . payload setup = 3 s
[2025-07-26 05:58:44] 2025-07-26 03:58:11,575 | INFO     | . stage-in = 0 s
[2025-07-26 05:58:44] 2025-07-26 03:58:11,575 | INFO     | . payload execution = 4183 s
[2025-07-26 05:58:44] 2025-07-26 03:58:11,575 | INFO     | . stage-out = 0 s
[2025-07-26 05:58:44] 2025-07-26 03:58:11,575 | INFO     | . log creation = 0 s
[2025-07-26 05:58:44] 2025-07-26 03:58:11,575 | INFO     | ..............................
[2025-07-26 05:58:44] 2025-07-26 03:58:11,924 | INFO     | 
[2025-07-26 05:58:44] 2025-07-26 03:58:11,924 | INFO     | job summary report
[2025-07-26 05:58:44] 2025-07-26 03:58:11,924 | INFO     | --------------------------------------------------
[2025-07-26 05:58:44] 2025-07-26 03:58:11,924 | INFO     | PanDA job id: 6744975799
[2025-07-26 05:58:44] 2025-07-26 03:58:11,924 | INFO     | task id: 45743349
[2025-07-26 05:58:44] 2025-07-26 03:58:11,924 | INFO     | errors: (none)
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | pilot state: finished 
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | transexitcode: 0
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | exeerrorcode: 0
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | exeerrordiag: 
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | exitcode: 0
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | exitmsg: OK
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | cpuconsumptiontime: 15784 s
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | nevents: 400
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | neventsw: 0
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | pid: 4072508
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | pgrp: 4072508
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | corecount: 4
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | event service: False
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | sizes: {0: 2397476, 3: 2397738, 11: 2397766, 4191: 2432923, 4194: 2433061}
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | --------------------------------------------------
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | 
[2025-07-26 05:58:44] 2025-07-26 03:58:11,925 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-26 05:58:44] 2025-07-26 03:58:11,941 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,941 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,941 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | job 6744975799 has completed (purged errors)
[2025-07-26 05:58:44] 2025-07-26 03:58:11,942 | INFO     | overall cleanup function is called
[2025-07-26 05:58:44] 2025-07-26 03:58:12,949 | INFO     | --- collectZombieJob: --- 10, [4072508]
[2025-07-26 05:58:44] 2025-07-26 03:58:12,949 | INFO     | zombie collector waiting for pid 4072508
[2025-07-26 05:58:44] 2025-07-26 03:58:12,949 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 05:58:44] 2025-07-26 03:58:12,949 | INFO     | collected zombie processes
[2025-07-26 05:58:44] 2025-07-26 03:58:12,949 | INFO     | will attempt to kill all subprocesses of pid=4072508
[2025-07-26 05:58:44] 2025-07-26 03:58:12,992 | INFO     | process IDs to be killed: [4072508] (in reverse order)
[2025-07-26 05:58:44] 2025-07-26 03:58:13,019 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 05:58:44] 2025-07-26 03:58:13,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 05:58:44] 2025-07-26 03:58:13,020 | INFO     | did not find any defunct processes belonging to 4072508
[2025-07-26 05:58:44] 2025-07-26 03:58:13,021 | INFO     | did not find any defunct processes belonging to 4072508
[2025-07-26 05:58:44] 2025-07-26 03:58:13,021 | INFO     | ready for new job
[2025-07-26 05:58:44] 2025-07-26 03:58:13,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 05:58:44] 2025-07-26 03:58:13,022 | INFO     | ***************************************
[2025-07-26 05:58:44] 2025-07-26 03:58:13,022 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 05:58:44] 2025-07-26 03:58:13,022 | INFO     | ***************************************
[2025-07-26 05:58:44] 2025-07-26 03:58:13,022 | INFO     | 
[2025-07-26 05:58:44] 2025-07-26 03:58:13,022 | INFO     | architecture information:
[2025-07-26 05:58:44] 2025-07-26 03:58:13,023 | INFO     | executing command: cat /etc/os-release
[2025-07-26 05:58:44] 2025-07-26 03:58:13,033 | INFO     | cat /etc/os-release:
[2025-07-26 05:58:44] NAME="CentOS Linux"
[2025-07-26 05:58:44] VERSION="7 (Core)"
[2025-07-26 05:58:44] ID="centos"
[2025-07-26 05:58:44] ID_LIKE="rhel fedora"
[2025-07-26 05:58:44] VERSION_ID="7"
[2025-07-26 05:58:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 05:58:44] ANSI_COLOR="0;31"
[2025-07-26 05:58:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 05:58:44] HOME_URL="https://www.centos.org/"
[2025-07-26 05:58:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 05:58:44] 
[2025-07-26 05:58:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 05:58:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 05:58:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 05:58:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 05:58:44] 
[2025-07-26 05:58:44] 2025-07-26 03:58:13,033 | INFO     | ***************************************
[2025-07-26 05:58:44] 2025-07-26 03:58:13,536 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-26 05:58:44] 2025-07-26 03:58:13,550 | INFO     | sufficient remaining disk space (326134398976 B)
[2025-07-26 05:58:44] 2025-07-26 03:58:13,550 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 05:58:44] 2025-07-26 03:58:13,550 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 05:58:44] 2025-07-26 03:58:13,550 | INFO     | update_server=False
[2025-07-26 05:58:44] 2025-07-26 03:58:13,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 05:58:44] 2025-07-26 03:58:13,550 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:58:44] 2025-07-26 03:58:13,722 | INFO     | all job control threads have been joined
[2025-07-26 05:58:44] 2025-07-26 03:58:13,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 05:58:44] 2025-07-26 03:58:14,493 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 05:58:44] 2025-07-26 03:58:14,555 | INFO     | [job] retrieve thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:14,556 | INFO     | [job] queue monitor thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:14,563 | WARNING  | process 4072508 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 05:58:44] 2025-07-26 03:58:14,574 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:14,591 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:58:44] 2025-07-26 03:58:14,607 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:14,626 | INFO     | all data control threads have been joined
[2025-07-26 05:58:44] 2025-07-26 03:58:14,628 | INFO     | number of running child processes to parent process 4072508: 1
[2025-07-26 05:58:44] 2025-07-26 03:58:14,628 | INFO     | maximum number of monitored processes: 6
[2025-07-26 05:58:44] 2025-07-26 03:58:14,628 | INFO     | aborting job monitoring since job object (job id=6744975799) has expired
[2025-07-26 05:58:44] 2025-07-26 03:58:14,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:58:44] 2025-07-26 03:58:14,628 | INFO     | will abort loop
[2025-07-26 05:58:44] 2025-07-26 03:58:14,667 | INFO     | all payload control threads have been joined
[2025-07-26 05:58:44] 2025-07-26 03:58:14,727 | INFO     | [job] control thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:14,923 | INFO     | [payload] failed_post thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:15,120 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:15,360 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:15,549 | INFO     | [payload] validate_post thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:15,632 | INFO     | [data] control thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:15,634 | INFO     | [job] job monitor thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:15,635 | INFO     | [data] copytool_in thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:15,673 | INFO     | [payload] control thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:15,956 | INFO     | [job] validate thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:15,977 | INFO     | [data] copytool_out thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:18,501 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 05:58:44] 2025-07-26 03:58:20,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139906650953536)>', '<ExcThread(monitor, started 139906294716160)>']
[2025-07-26 05:58:44] 2025-07-26 03:58:25,519 | INFO     | all workflow threads have been joined
[2025-07-26 05:58:44] 2025-07-26 03:58:25,519 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 05:58:44] 2025-07-26 03:58:25,520 | INFO     | traces error code: 0
[2025-07-26 05:58:44] 2025-07-26 03:58:25,520 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 05:58:44] 2025-07-26 03:58:44,030 | INFO     | PID=4065894 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 05:58:44] 2025-07-26 03:58:44,031 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 05:58:44] 2025-07-26 03:58:44,031 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 05:58:44] 2025-07-26 03:58:44,031 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 05:58:44] 2025-07-26 03:58:44,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 05:58:44] 2025-07-26 03:58:44,031 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 05:58:44] 2025-07-26 03:58:44,031 | INFO     | [monitor] control thread has ended
[2025-07-26 05:58:44] 2025-07-26 03:58:44,081 [wrapper] ==== pilot stdout END ====
[2025-07-26 05:58:44] 2025-07-26 03:58:44,084 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 05:58:44] 2025-07-26 03:58:44,087 [wrapper] pilotpid: 4065894
[2025-07-26 05:58:44] 2025-07-26 03:58:44,089 [wrapper] Pilot exit status: 0
[2025-07-26 05:58:44] 2025-07-26 03:58:44,097 [wrapper] pandaids: 6744975799
[2025-07-26 05:58:44] 2025-07-26 03:58:44,115 [wrapper] cleanup supervisor_pilot 4082474 4065895
[2025-07-26 05:58:44] 2025-07-26 03:58:44,117 [wrapper] Test setup, not cleaning
[2025-07-26 05:58:44] 2025-07-26 03:58:44,120 [wrapper] apfmon messages muted
[2025-07-26 05:58:44] 2025-07-26 03:58:44,122 [wrapper] ==== wrapper stdout END ====
[2025-07-26 05:58:44] 2025-07-26 03:58:44,125 [wrapper] ==== wrapper stderr END ====
[2025-07-26 05:58:44]  *** Error codes and diagnostics ***
[2025-07-26 05:58:44]     "exeErrorCode": 0,
[2025-07-26 05:58:44]     "exeErrorDiag": "",
[2025-07-26 05:58:44]     "pilotErrorCode": 0,
[2025-07-26 05:58:44]     "pilotErrorDiag": "",
[2025-07-26 05:58:44]  *** Listing of results directory ***
[2025-07-26 05:58:44] total 430268
[2025-07-26 05:58:44] -rwx------ 1 boinc boinc     36292 Jul 25 10:18 runpilot2-wrapper.sh
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc    530466 Jul 25 10:18 pilot3.tar.gz
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc      5112 Jul 25 10:18 queuedata.json
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc       100 Jul 26 04:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 05:58:44] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 04:47 run_atlas
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc       105 Jul 26 04:47 job.xml
[2025-07-26 05:58:44] -rw-r--r-- 2 boinc boinc 228585535 Jul 26 04:47 EVNT.45743347._000957.pool.root.1
[2025-07-26 05:58:44] drwxrwx--x 2 boinc boinc      4096 Jul 26 04:47 shared
[2025-07-26 05:58:44] -rw-r--r-- 2 boinc boinc    542892 Jul 26 04:47 input.tar.gz
[2025-07-26 05:58:44] -rw-r--r-- 2 boinc boinc     15095 Jul 26 04:47 start_atlas.sh
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc         0 Jul 26 04:47 boinc_setup_complete
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc      6520 Jul 26 04:47 init_data.xml
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc         0 Jul 26 04:47 boinc_lockfile
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc      2562 Jul 26 04:47 pandaJob.out
[2025-07-26 05:58:44] -rw------- 1 boinc boinc    979977 Jul 26 04:48 agis_schedconf.cvmfs.json
[2025-07-26 05:58:44] -rw------- 1 boinc boinc   1593052 Jul 26 04:48 agis_ddmendpoints.agis.ALL.json
[2025-07-26 05:58:44] drwx------ 4 boinc boinc      4096 Jul 26 04:48 pilot3
[2025-07-26 05:58:44] -rw------- 1 boinc boinc 206811724 Jul 26 05:57 HITS.45743349._018362.pool.root.1
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc       529 Jul 26 05:57 boinc_task_state.xml
[2025-07-26 05:58:44] -rw------- 1 boinc boinc      1017 Jul 26 05:58 memory_monitor_summary.json
[2025-07-26 05:58:44] -rw------- 1 boinc boinc    239823 Jul 26 05:58 log.45743349._018362.job.log.tgz.1
[2025-07-26 05:58:44] -rw------- 1 boinc boinc      7754 Jul 26 05:58 heartbeat.json
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc        27 Jul 26 05:58 wrapper_checkpoint.txt
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc      8192 Jul 26 05:58 boinc_mmap_file
[2025-07-26 05:58:44] -rw------- 1 boinc boinc       817 Jul 26 05:58 pilotlog.txt
[2025-07-26 05:58:44] -rw------- 1 boinc boinc        95 Jul 26 05:58 pilot_heartbeat.json
[2025-07-26 05:58:44] -rw------- 1 boinc boinc    419454 Jul 26 05:58 log.45743349._018362.job.log.1
[2025-07-26 05:58:44] -rw------- 1 boinc boinc       357 Jul 26 05:58 output.list
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc       620 Jul 26 05:58 runtime_log
[2025-07-26 05:58:44] -rw------- 1 boinc boinc    675840 Jul 26 05:58 result.tar.gz
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc      8739 Jul 26 05:58 runtime_log.err
[2025-07-26 05:58:44] -rw------- 1 boinc boinc       659 Jul 26 05:58 cwxNDmYoSz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnhyKDm1uVVWo.diag
[2025-07-26 05:58:44] -rw-r--r-- 1 boinc boinc     21530 Jul 26 05:58 stderr.txt
[2025-07-26 05:58:44] HITS file was successfully produced:
[2025-07-26 05:58:44] -rw------- 1 boinc boinc 206811724 Jul 26 05:57 shared/HITS.pool.root.1
[2025-07-26 05:58:44]  *** Contents of shared directory: ***
[2025-07-26 05:58:44] total 426416
[2025-07-26 05:58:44] -rw-r--r-- 2 boinc boinc 228585535 Jul 26 04:47 ATLAS.root_0
[2025-07-26 05:58:44] -rw-r--r-- 2 boinc boinc    542892 Jul 26 04:47 input.tar.gz
[2025-07-26 05:58:44] -rw-r--r-- 2 boinc boinc     15095 Jul 26 04:47 start_atlas.sh
[2025-07-26 05:58:44] -rw------- 1 boinc boinc 206811724 Jul 26 05:57 HITS.pool.root.1
[2025-07-26 05:58:44] -rw------- 1 boinc boinc    675840 Jul 26 05:58 result.tar.gz
05:58:45 (4062192): run_atlas exited; CPU time 15791.582307
05:58:45 (4062192): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN